AlfalfaGEDB | Msa0704860

M. sativa cultivar zhongmu-4 / Msa0704860

KEGG: K02934
GO: GO:0000027 GO:0002181 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005783 GO:0005829 GO:0005840 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0010467 GO:0012505 GO:0015934 GO:0016020 GO:0016043 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0022625 GO:0022626 GO:0030054 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0042221 GO:0042254 GO:0042255 GO:0042273 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0050896 GO:0055044 GO:0065003 GO:0070013 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF03868.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0704860	ACJ84110.1	98.718	234	3	0	1	234	1	234	3.61e-164	462

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0704860	sp\|P34091\|RL6_MESCR	79.487	234	48	0	1	234	1	234	2.53e-128	365

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0704860	B7FH81	98.718	234	3	0	1	234	1	234	1.72e-164	462

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001760	Msa0704860	0.854709	1.027427e-61	-8.615850e-47
Msa0003330	Msa0704860	0.820804	5.650526e-53	-8.615850e-47
Msa0027590	Msa0704860	0.871238	7.956717e-67	-8.615850e-47
Msa0040220	Msa0704860	0.823899	1.080340e-53	-8.615850e-47
Msa0072570	Msa0704860	0.807579	4.718308e-50	-8.615850e-47
Msa0075350	Msa0704860	0.820812	5.627962e-53	-8.615850e-47
Msa0087910	Msa0704860	0.855996	4.334638e-62	-8.615850e-47
Msa0094210	Msa0704860	0.822835	1.915365e-53	-8.615850e-47
Msa0114600	Msa0704860	0.846654	1.896751e-59	-8.615850e-47
Msa0602900	Msa0704860	0.872882	2.260151e-67	-8.615850e-47
Msa0605890	Msa0704860	0.894505	2.314578e-75	-8.615850e-47
Msa0619230	Msa0704860	0.913599	5.106294e-84	-8.615850e-47
Msa0622230	Msa0704860	0.812356	4.417958e-51	-8.615850e-47
Msa0643960	Msa0704860	0.874824	4.993312e-68	-8.615850e-47
Msa0649890	Msa0704860	0.814224	1.718034e-51	-8.615850e-47
Msa0653060	Msa0704860	0.803602	3.224158e-49	-8.615850e-47
Msa0656450	Msa0704860	0.840899	6.584155e-58	-8.615850e-47
Msa0663400	Msa0704860	0.822103	2.833222e-53	-8.615850e-47
Msa0686550	Msa0704860	0.850727	1.408722e-60	-8.615850e-47
Msa0691760	Msa0704860	0.818427	1.971820e-52	-8.615850e-47
Msa0694400	Msa0704860	0.881527	2.229703e-70	-8.615850e-47
Msa0704860	Msa0708630	0.846751	1.784466e-59	-8.615850e-47
Msa0704860	Msa0748350	0.824767	6.753659e-54	-8.615850e-47
Msa0704860	Msa0758420	0.801550	8.540880e-49	-8.615850e-47
Msa0704860	Msa0788380	0.834204	3.431393e-56	-8.615850e-47
Msa0704860	Msa0790450	0.850461	1.673093e-60	-8.615850e-47
Msa0704860	Msa0902730	0.831783	1.372362e-55	-8.615850e-47
Msa0704860	Msa0927910	0.803341	3.651368e-49	-8.615850e-47
Msa0704860	Msa0929700	0.877413	6.409846e-69	-8.615850e-47
Msa0704860	Msa0929790	0.800690	1.280618e-48	-8.615850e-47
Msa0704860	Msa0930100	0.814808	1.275675e-51	-8.615850e-47
Msa0704860	Msa0930360	0.805170	1.519412e-49	-8.615850e-47
Msa0704860	Msa0930790	0.819682	1.021499e-52	-8.615850e-47
Msa0704860	Msa0930890	0.824694	7.026790e-54	-8.615850e-47
Msa0704860	Msa1019110	0.845467	3.987968e-59	-8.615850e-47
Msa0704860	Msa1037290	0.812797	3.538574e-51	-8.615850e-47
Msa0704860	Msa1040160	0.807793	4.249182e-50	-8.615850e-47
Msa0704860	Msa1041680	0.834403	3.058797e-56	-8.615850e-47
Msa0704860	Msa1050100	0.807074	6.037629e-50	-8.615850e-47
Msa0704860	Msa1079910	0.810721	1.001134e-50	-8.615850e-47
Msa0704860	Msa1082050	0.810724	9.998794e-51	-8.615850e-47
Msa0704860	Msa1093500	0.825556	4.394368e-54	-8.615850e-47
Msa0704860	Msa1126690	0.858349	8.757580e-63	-8.615850e-47
Msa0704860	Msa1144610	0.823161	1.607692e-53	-8.615850e-47
Msa0704860	Msa1163320	0.816170	6.349506e-52	-8.615850e-47
Msa0704860	Msa1164150	0.837196	5.993759e-57	-8.615850e-47
Msa0704860	Msa1165640	0.811598	6.462848e-51	-8.615850e-47
Msa0704860	Msa1166570	0.831433	1.673970e-55	-8.615850e-47
Msa0704860	Msa1180000	0.807186	5.716218e-50	-8.615850e-47
Msa0704860	Msa1186030	0.819124	1.369072e-52	-8.615850e-47
Msa0704860	Msa1206240	0.814380	1.586808e-51	-8.615850e-47
Msa0704860	Msa1235950	0.807500	4.904859e-50	-8.615850e-47
Msa0704860	Msa1235980	0.816836	4.503448e-52	-8.615850e-47
Msa0704860	Msa1237040	0.832907	7.228697e-56	-8.615850e-47
Msa0704860	Msa1245270	0.809544	1.795869e-50	-8.615850e-47
Msa0704860	Msa1255850	0.810062	1.389391e-50	-8.615850e-47
Msa0704860	Msa1258540	0.806143	9.490908e-50	-8.615850e-47
Msa0704860	Msa1296090	0.825001	5.947623e-54	-8.615850e-47
Msa0704860	Msa1311400	0.838321	3.082577e-57	-8.615850e-47
Msa0704860	Msa1317390	0.831517	1.595776e-55	-8.615850e-47
Msa0704860	Msa1341780	0.810064	1.388017e-50	-8.615850e-47
Msa0704860	Msa1351020	0.908728	1.243999e-81	-8.615850e-47
Msa0704860	Msa1351910	0.805881	1.077490e-49	-8.615850e-47
Msa0704860	Msa1353300	0.818474	1.923186e-52	-8.615850e-47
Msa0704860	Msa1358710	0.833928	4.023034e-56	-8.615850e-47
Msa0704860	Msa1363910	0.835622	1.507502e-56	-8.615850e-47
Msa0704860	Msa1367540	0.844902	5.670615e-59	-8.615850e-47
Msa0704860	Msa1368920	0.814830	1.261811e-51	-8.615850e-47
Msa0704860	Msa1385480	0.874520	6.332778e-68	-8.615850e-47
Msa0704860	Msa1390760	0.912592	1.631670e-83	-8.615850e-47
Msa0704860	Msa1407550	0.827482	1.526796e-54	-8.615850e-47
Msa0704860	Msa1413570	0.847505	1.108442e-59	-8.615850e-47
Msa0704860	Msa1424570	0.855010	8.402863e-62	-8.615850e-47
Msa0704860	Msa1432310	0.894815	1.728455e-75	-8.615850e-47
Msa0704860	Msa1446410	0.869149	3.844597e-66	-8.615850e-47
Msa0704860	Msa1446510	0.828056	1.111101e-54	-8.615850e-47
Msa0704860	Msa1449160	0.823046	1.709781e-53	-8.615850e-47
Msa0704860	Msa1450560	0.854060	1.582154e-61	-8.615850e-47
Msa0704860	Msa1463570	0.874970	4.452635e-68	-8.615850e-47
Msa0704860	Msa1465700	0.812657	3.796876e-51	-8.615850e-47
Msa0123290	Msa0704860	0.827871	1.231133e-54	-8.615850e-47
Msa0127180	Msa0704860	0.804691	1.913014e-49	-8.615850e-47
Msa0128330	Msa0704860	0.884813	1.391816e-71	-8.615850e-47
Msa0132460	Msa0704860	0.846885	1.639268e-59	-8.615850e-47
Msa0134580	Msa0704860	0.869209	3.674711e-66	-8.615850e-47
Msa0146610	Msa0704860	0.816639	4.984313e-52	-8.615850e-47
Msa0167860	Msa0704860	0.890799	7.106318e-74	-8.615850e-47
Msa0168320	Msa0704860	0.829697	4.451504e-55	-8.615850e-47
Msa0174580	Msa0704860	0.879420	1.264944e-69	-8.615850e-47
Msa0182050	Msa0704860	0.847746	9.517823e-60	-8.615850e-47
Msa0182100	Msa0704860	0.828626	8.098983e-55	-8.615850e-47
Msa0183840	Msa0704860	0.842489	2.507246e-58	-8.615850e-47
Msa0187810	Msa0704860	0.807224	5.611841e-50	-8.615850e-47
Msa0191450	Msa0704860	0.850824	1.322911e-60	-8.615850e-47
Msa0191550	Msa0704860	0.860806	1.597499e-63	-8.615850e-47
Msa0192300	Msa0704860	0.838211	3.289621e-57	-8.615850e-47
Msa0194940	Msa0704860	0.860194	2.448109e-63	-8.615850e-47
Msa0216640	Msa0704860	0.810971	8.841423e-51	-8.615850e-47
Msa0235050	Msa0704860	0.831326	1.778641e-55	-8.615850e-47
Msa0369410	Msa0704860	0.852009	6.114993e-61	-8.615850e-47
Msa0371490	Msa0704860	0.846758	1.775997e-59	-8.615850e-47
Msa0376850	Msa0704860	0.837758	4.302731e-57	-8.615850e-47
Msa0377370	Msa0704860	0.801399	9.172188e-49	-8.615850e-47
Msa0377520	Msa0704860	0.815381	9.517235e-52	-8.615850e-47
Msa0419710	Msa0704860	0.823584	1.280301e-53	-8.615850e-47
Msa0426090	Msa0704860	0.880484	5.285760e-70	-8.615850e-47
Msa0426250	Msa0704860	0.891025	5.784108e-74	-8.615850e-47
Msa0450150	Msa0704860	0.850198	1.983190e-60	-8.615850e-47
Msa0472480	Msa0704860	0.871176	8.338941e-67	-8.615850e-47
Msa0481520	Msa0704860	0.847259	1.294662e-59	-8.615850e-47
Msa0239420	Msa0704860	0.817231	3.670282e-52	-8.615850e-47
Msa0264640	Msa0704860	0.836337	9.925935e-57	-8.615850e-47
Msa0270160	Msa0704860	0.829983	3.791985e-55	-8.615850e-47
Msa0277600	Msa0704860	0.881228	2.856956e-70	-8.615850e-47
Msa0281330	Msa0704860	0.849234	3.685108e-60	-8.615850e-47
Msa0281370	Msa0704860	0.858801	6.418930e-63	-8.615850e-47
Msa0301220	Msa0704860	0.814734	1.324968e-51	-8.615850e-47
Msa0301250	Msa0704860	0.838504	2.765755e-57	-8.615850e-47
Msa0313060	Msa0704860	0.862630	4.423839e-64	-8.615850e-47
Msa0315430	Msa0704860	0.867258	1.562199e-65	-8.615850e-47
Msa0511760	Msa0704860	0.827820	1.266839e-54	-8.615850e-47
Msa0516830	Msa0704860	0.838320	3.084882e-57	-8.615850e-47
Msa0517480	Msa0704860	0.840298	9.457712e-58	-8.615850e-47
Msa0529900	Msa0704860	0.828681	7.853002e-55	-8.615850e-47
Msa0547920	Msa0704860	0.884363	2.044438e-71	-8.615850e-47
Msa0550420	Msa0704860	0.808859	2.518360e-50	-8.615850e-47
Msa0573550	Msa0704860	0.897144	1.869080e-76	-8.615850e-47
Msa0574780	Msa0704860	0.842827	2.038072e-58	-8.615850e-47
Msa0578010	Msa0704860	0.832211	1.075664e-55	-8.615850e-47
Msa0579830	Msa0704860	0.812272	4.609406e-51	-8.615850e-47
Msa0582070	Msa0704860	0.823823	1.125316e-53	-8.615850e-47
Msa0585570	Msa0704860	0.814884	1.227405e-51	-8.615850e-47
Msa0597240	Msa0704860	0.826550	2.550879e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0704860	MtrunA17_Chr5g0448021	95.726	234	10	0	1	234	1	234	4.80e-162	447
Msa0704860	MtrunA17_Chr3g0129031	86.325	234	31	1	1	234	1	233	1.51e-145	405
Msa0704860	MtrunA17_Chr3g0129231	86.325	234	31	1	1	234	1	233	2.82e-145	405
Msa0704860	MtrunA17_Chr8g0383131	95.930	172	7	0	1	172	1	172	7.93e-120	339

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa0704860	AT1G74050.1	81.034	232	44	3	234	2	233	1.48e-121	345
Msa0704860	AT1G74060.1	80.172	232	46	3	234	2	233	6.14e-120	341
Msa0704860	AT1G18540.1	78.448	232	50	3	234	2	233	5.03e-115	328

Find 81 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTCTTGCCGGTAGATTTA+AGG	0.142019	4_4:-77378348	Msa0704860:CDS
GATGGAACTTGAAGTATTTC+AGG	0.215273	4_4:-77377001	Msa0704860:three_prime_UTR
GCACTTTCTTAACTGTAATA+TGG	0.229052	4_4:-77377272	Msa0704860:three_prime_UTR
CCAATTCCTCTGATCAAATC+AGG	0.248411	4_4:+77378873	None:intergenic
TCATCAGCAGGGTAAAATTT+TGG	0.250055	4_4:+77378729	None:intergenic
AGCATGCCAAAGGAAAATTT+TGG	0.277279	4_4:-77377157	Msa0704860:three_prime_UTR
TCTGGATTGCTTCTTGTAAC+TGG	0.291952	4_4:-77378293	Msa0704860:intron
CACGAACTCGTCTTCTAGTT+TGG	0.298877	4_4:-77377358	Msa0704860:exon
CCTGATTTGATCAGAGGAAT+TGG	0.319315	4_4:-77378873	Msa0704860:CDS
TCAACAGCAGTTTCGGGCTT+AGG	0.337911	4_4:+77378759	None:intergenic
CAAGACACTGACTCGGATAA+AGG	0.338529	4_4:+77377073	None:intergenic
GCAGTTTCGGGCTTAGGTTT+AGG	0.345228	4_4:+77378765	None:intergenic
TCCTTTGAGACGTGTGAATC+AGG	0.346287	4_4:-77377746	Msa0704860:CDS
GAAAGGTATCTGGGCTATTA+AGG	0.349673	4_4:-77378820	Msa0704860:CDS
TGTATCACAAGAAAGGTATC+TGG	0.350934	4_4:-77378830	Msa0704860:CDS
TTTCAACGGGTACACATGAT+AGG	0.352243	4_4:+77376973	None:intergenic
CTCTGATCAAATCAGGGTTT+CGG	0.358025	4_4:+77378880	None:intergenic
CTTCTTGCCGGTAGATTTAA+GGG	0.364740	4_4:-77378347	Msa0704860:CDS
AAGACACTGACTCGGATAAA+GGG	0.388739	4_4:+77377074	None:intergenic
CCAGACTTGAAGACTTATCT+TGG	0.410256	4_4:-77377415	Msa0704860:CDS
CCAAGATAAGTCTTCAAGTC+TGG	0.428069	4_4:+77377415	None:intergenic
TTGAAAAGTACTTGTCATCA+AGG	0.430348	4_4:+77377668	None:intergenic
ACAGTGCTGATTCTTCTTGC+CGG	0.435264	4_4:-77378359	Msa0704860:CDS
AACACTGGAGATATCGACTT+TGG	0.445781	4_4:+77377702	None:intergenic
CGAATTCTTTGAGTCAGATA+AGG	0.457015	4_4:-77377611	Msa0704860:CDS
AATAAATCTATGTAATGTAA+TGG	0.457278	4_4:+77379017	None:intergenic
GGCTTCTTCACATCATCAGC+AGG	0.465308	4_4:+77378717	None:intergenic
TGAAGACTTATCTTGGTGCC+AGG	0.466625	4_4:-77377408	Msa0704860:CDS
AAGAAGAATCAGCACTGTGC+CGG	0.476099	4_4:+77378364	None:intergenic
TCAGTTCCATCTCAATAAGC+TGG	0.483444	4_4:+77377043	None:intergenic
ACCTGCCTTGAGAGAAAACC+TGG	0.493075	4_4:+77377390	None:intergenic
ATCAGGGTTTCGGCTAACCC+TGG	0.499591	4_4:+77378890	None:intergenic
TGGTCATCTTTCTTCTGCTG+AGG	0.501451	4_4:+77377481	None:intergenic
TCTTCTAGTTTGGAGGAAAG+AGG	0.510621	4_4:-77377348	Msa0704860:exon
ACTGTAATATGGAATTCTGC+TGG	0.512780	4_4:-77377261	Msa0704860:three_prime_UTR
AGAAGAATCAGCACTGTGCC+GGG	0.513749	4_4:+77378365	None:intergenic
CAATTCCTCTGATCAAATCA+GGG	0.517272	4_4:+77378874	None:intergenic
AGGAACTCCGTTGATCTTGA+AGG	0.517314	4_4:+77377765	None:intergenic
TTTGCATTTCGTAGCAGCAA+TGG	0.530175	4_4:-77378934	Msa0704860:exon
GTGAATCAGGCCTATGTGAT+TGG	0.535696	4_4:-77377733	Msa0704860:CDS
CTGGGTGCTCTCTGCTTCGT+CGG	0.540977	4_4:+77378909	None:intergenic
TCACAGATGTATCACAAGAA+AGG	0.542107	4_4:-77378837	Msa0704860:CDS
ACTGACTCGGATAAAGGGGC+AGG	0.543645	4_4:+77377079	None:intergenic
TTCAGGGCAAGCATCACTCC+CGG	0.546234	4_4:-77378383	Msa0704860:intron
CCTCTTGCCCTTAAATCTAC+CGG	0.549567	4_4:+77378340	None:intergenic
GTATCACAAGAAAGGTATCT+GGG	0.554030	4_4:-77378829	Msa0704860:CDS
CGATATCTCCAGTGTTAATG+TGG	0.556990	4_4:-77377695	Msa0704860:CDS
GAACTCGTCTTCTAGTTTGG+AGG	0.559347	4_4:-77377355	Msa0704860:exon
TAATAACCAGCTTATTGAGA+TGG	0.562966	4_4:-77377049	Msa0704860:three_prime_UTR
CTTCTAGTTTGGAGGAAAGA+GGG	0.566293	4_4:-77377347	Msa0704860:exon
GGCTTATGCTTGTTGCGAAG+AGG	0.566563	4_4:+77378696	None:intergenic
AGCCTAAGCAGACTAAGCTC+AGG	0.567914	4_4:-77378677	Msa0704860:intron
TCAGGGTTTCGGCTAACCCT+GGG	0.568120	4_4:+77378891	None:intergenic
TCTATGTAATGTAATGGACC+CGG	0.568422	4_4:+77379023	None:intergenic
CGAAACCCTGATTTGATCAG+AGG	0.574541	4_4:-77378879	Msa0704860:CDS
CGGTAGATTTAAGGGCAAGA+GGG	0.577532	4_4:-77378339	Msa0704860:CDS
GCCTGATTCACACGTCTCAA+AGG	0.578175	4_4:+77377745	None:intergenic
GAGTATATATCAGTATTTCA+CGG	0.578413	4_4:+77376890	None:intergenic
CCGGTAGATTTAAGGGCAAG+AGG	0.581183	4_4:-77378340	Msa0704860:CDS
ACAATAGCAAAATTGCATGA+AGG	0.581258	4_4:+77377231	None:intergenic
AACCTGAGCTTAGTCTGCTT+AGG	0.583716	4_4:+77378675	None:intergenic
CTTTCACTTGAGCATGCCAA+AGG	0.584843	4_4:-77377167	Msa0704860:three_prime_UTR
GGAACTCCGTTGATCTTGAA+GGG	0.585587	4_4:+77377766	None:intergenic
GGTTGATGTACCAATCACAT+AGG	0.591225	4_4:+77377723	None:intergenic
GACGAAGCAGAGAGCACCCA+GGG	0.611105	4_4:-77378907	Msa0704860:CDS
AACTAGAAGACGAGTTCGTG+TGG	0.615065	4_4:+77377361	None:intergenic
TCAGGTCCCTTCAAGATCAA+CGG	0.616664	4_4:-77377772	Msa0704860:intron
AAGGTTATCCACATTAACAC+TGG	0.619607	4_4:+77377687	None:intergenic
AAGATAGTCTCTGTGTTGTG+TGG	0.624196	4_4:+77378993	None:intergenic
AGACACTGACTCGGATAAAG+GGG	0.625328	4_4:+77377075	None:intergenic
ATTCTTTGAGTCAGATAAGG+AGG	0.630746	4_4:-77377608	Msa0704860:intron
TAGATTTAAGGGCAAGAGGG+TGG	0.640763	4_4:-77378336	Msa0704860:CDS
GTTACAAGAAGCAATCCAGA+AGG	0.643198	4_4:+77378296	None:intergenic
CGACGAAGCAGAGAGCACCC+AGG	0.649766	4_4:-77378908	Msa0704860:CDS
CTATGTAATGTAATGGACCC+GGG	0.650162	4_4:+77379024	None:intergenic
GCTTCTTCACATCATCAGCA+GGG	0.669182	4_4:+77378718	None:intergenic
TTATTATCAAGACACTGACT+CGG	0.673999	4_4:+77377066	None:intergenic
TTAGGTTTAGGATCATGACG+AGG	0.681191	4_4:+77378777	None:intergenic
TAGGTTTAGGATCATGACGA+GGG	0.683516	4_4:+77378778	None:intergenic
GAAAGATGACCAGAAAACAG+TGG	0.686525	4_4:-77377470	Msa0704860:CDS
CTGACTCGGATAAAGGGGCA+GGG	0.687621	4_4:+77377080	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GTGTTTTATAATTTTTTTAA+TGG	-	chr4_4:77378604-77378623	Msa0704860:intron	10.0%
!!!	GTGTTTTATAATTTTTTTAA+TGG	-	chr4_4:77378604-77378623	Msa0704860:intron	10.0%
!!	AATAAATCTATGTAATGTAA+TGG	+	chr4_4:77376903-77376922	None:intergenic	15.0%
!!!	TACATGATTTTGATATTATT+TGG	-	chr4_4:77377451-77377470	Msa0704860:CDS	15.0%
!!!	ACATGATTTTGATATTATTT+GGG	-	chr4_4:77377452-77377471	Msa0704860:CDS	15.0%
!!!	TATCATTTTTGTTAAGAAAA+AGG	+	chr4_4:77378809-77378828	None:intergenic	15.0%
!!	AATAAATCTATGTAATGTAA+TGG	+	chr4_4:77376903-77376922	None:intergenic	15.0%
!!!	TACATGATTTTGATATTATT+TGG	-	chr4_4:77377451-77377470	Msa0704860:CDS	15.0%
!!!	ACATGATTTTGATATTATTT+GGG	-	chr4_4:77377452-77377471	Msa0704860:CDS	15.0%
!!!	TATCATTTTTGTTAAGAAAA+AGG	+	chr4_4:77378809-77378828	None:intergenic	15.0%
!!!	CAGTTATTCTTATCATTTTA+CGG	-	chr4_4:77377289-77377308	Msa0704860:three_prime_UTR	20.0%
!!	AATATCAAAATCATGTACAA+AGG	+	chr4_4:77377448-77377467	None:intergenic	20.0%
!!!	TTTTGATATTATTTGGGATA+TGG	-	chr4_4:77377458-77377477	Msa0704860:CDS	20.0%
!!	AAGATCAGAAATTTAATTGA+TGG	+	chr4_4:77377720-77377739	None:intergenic	20.0%
!!!	TCTTATTCTTTTTATGTACT+AGG	-	chr4_4:77377736-77377755	Msa0704860:CDS	20.0%
!!!	TGTTTTTTATTTTTGATTGC+AGG	-	chr4_4:77378399-77378418	Msa0704860:intron	20.0%
!!!	TATGAATTTTAGTTATTGTG+AGG	-	chr4_4:77378727-77378746	Msa0704860:CDS	20.0%
!!!	CAGTTATTCTTATCATTTTA+CGG	-	chr4_4:77377289-77377308	Msa0704860:three_prime_UTR	20.0%
!!	AATATCAAAATCATGTACAA+AGG	+	chr4_4:77377448-77377467	None:intergenic	20.0%
!!!	TTTTGATATTATTTGGGATA+TGG	-	chr4_4:77377458-77377477	Msa0704860:CDS	20.0%
!!	AAGATCAGAAATTTAATTGA+TGG	+	chr4_4:77377720-77377739	None:intergenic	20.0%
!!!	TCTTATTCTTTTTATGTACT+AGG	-	chr4_4:77377736-77377755	Msa0704860:CDS	20.0%
!!!	TGTTTTTTATTTTTGATTGC+AGG	-	chr4_4:77378399-77378418	Msa0704860:intron	20.0%
!!!	TATGAATTTTAGTTATTGTG+AGG	-	chr4_4:77378727-77378746	Msa0704860:CDS	20.0%
!!!	CAACCAGTATTTGTTATTTT+AGG	-	chr4_4:77377417-77377436	Msa0704860:CDS	25.0%
!	TCACCTAAAATAACAAATAC+TGG	+	chr4_4:77377423-77377442	None:intergenic	25.0%
!!!	TAACACTTTTGTTTTGTGTT+GGG	-	chr4_4:77377500-77377519	Msa0704860:intron	25.0%
!!!	ACTTTGATCATTTTTTCAAC+GGG	+	chr4_4:77378960-77378979	None:intergenic	25.0%
!!!	CACTTTGATCATTTTTTCAA+CGG	+	chr4_4:77378961-77378980	None:intergenic	25.0%
!!!	CAACCAGTATTTGTTATTTT+AGG	-	chr4_4:77377417-77377436	Msa0704860:CDS	25.0%
!	TCACCTAAAATAACAAATAC+TGG	+	chr4_4:77377423-77377442	None:intergenic	25.0%
!!!	TAACACTTTTGTTTTGTGTT+GGG	-	chr4_4:77377500-77377519	Msa0704860:intron	25.0%
!!!	ACTTTGATCATTTTTTCAAC+GGG	+	chr4_4:77378960-77378979	None:intergenic	25.0%
!!!	CACTTTGATCATTTTTTCAA+CGG	+	chr4_4:77378961-77378980	None:intergenic	25.0%
	ACAGTGTTCTTTGTGTTAAT+TGG	-	chr4_4:77377359-77377378	Msa0704860:exon	30.0%
	CAGTGTTCTTTGTGTTAATT+GGG	-	chr4_4:77377360-77377379	Msa0704860:exon	30.0%
	TTTGTGTTAATTGGGATTAC+TGG	-	chr4_4:77377368-77377387	Msa0704860:CDS	30.0%
!!!	GTAACACTTTTGTTTTGTGT+TGG	-	chr4_4:77377499-77377518	Msa0704860:CDS	30.0%
	TTTGTTGCTCTTGATTGATA+AGG	-	chr4_4:77377666-77377685	Msa0704860:CDS	30.0%
	AGAAATGTTGACGAGATATA+AGG	-	chr4_4:77377770-77377789	Msa0704860:CDS	30.0%
	GAAATGTTGACGAGATATAA+GGG	-	chr4_4:77377771-77377790	Msa0704860:CDS	30.0%
!!	CATAAGTTTTGTCACTGTTT+GGG	+	chr4_4:77377948-77377967	None:intergenic	30.0%
!!	ACATAAGTTTTGTCACTGTT+TGG	+	chr4_4:77377949-77377968	None:intergenic	30.0%
	TATTCAATGTTGACATCAGT+TGG	+	chr4_4:77378043-77378062	None:intergenic	30.0%
	GATGTCAACATTGAATATCA+TGG	-	chr4_4:77378046-77378065	Msa0704860:intron	30.0%
!	TTTTTCTTACTTTGCATCTC+AGG	-	chr4_4:77378127-77378146	Msa0704860:intron	30.0%
!!	TTGAAAAGTACTTGTCATCA+AGG	+	chr4_4:77378252-77378271	None:intergenic	30.0%
!	TGATGACAAGTACTTTTCAA+AGG	-	chr4_4:77378252-77378271	Msa0704860:intron	30.0%
!!	TTTTTGATTGCAGGAGAAAA+AGG	-	chr4_4:77378408-77378427	Msa0704860:intron	30.0%
	GCACTTTCTTAACTGTAATA+TGG	-	chr4_4:77378645-77378664	Msa0704860:intron	30.0%
	ACAATAGCAAAATTGCATGA+AGG	+	chr4_4:77378689-77378708	None:intergenic	30.0%
!	TTATTATCAAGACACTGACT+CGG	+	chr4_4:77378854-77378873	None:intergenic	30.0%
	TAATAACCAGCTTATTGAGA+TGG	-	chr4_4:77378868-77378887	Msa0704860:CDS	30.0%
	GAAAAATTCTTAATGCGAGA+TGG	-	chr4_4:77378898-77378917	Msa0704860:CDS	30.0%
	ACAGTGTTCTTTGTGTTAAT+TGG	-	chr4_4:77377359-77377378	Msa0704860:exon	30.0%
	CAGTGTTCTTTGTGTTAATT+GGG	-	chr4_4:77377360-77377379	Msa0704860:exon	30.0%
	TTTGTGTTAATTGGGATTAC+TGG	-	chr4_4:77377368-77377387	Msa0704860:CDS	30.0%
!!!	GTAACACTTTTGTTTTGTGT+TGG	-	chr4_4:77377499-77377518	Msa0704860:CDS	30.0%
	TTTGTTGCTCTTGATTGATA+AGG	-	chr4_4:77377666-77377685	Msa0704860:CDS	30.0%
	AGAAATGTTGACGAGATATA+AGG	-	chr4_4:77377770-77377789	Msa0704860:CDS	30.0%
	GAAATGTTGACGAGATATAA+GGG	-	chr4_4:77377771-77377790	Msa0704860:CDS	30.0%
!!	CATAAGTTTTGTCACTGTTT+GGG	+	chr4_4:77377948-77377967	None:intergenic	30.0%
!!	ACATAAGTTTTGTCACTGTT+TGG	+	chr4_4:77377949-77377968	None:intergenic	30.0%
	TATTCAATGTTGACATCAGT+TGG	+	chr4_4:77378043-77378062	None:intergenic	30.0%
	GATGTCAACATTGAATATCA+TGG	-	chr4_4:77378046-77378065	Msa0704860:intron	30.0%
!	TTTTTCTTACTTTGCATCTC+AGG	-	chr4_4:77378127-77378146	Msa0704860:intron	30.0%
!!	TTGAAAAGTACTTGTCATCA+AGG	+	chr4_4:77378252-77378271	None:intergenic	30.0%
!	TGATGACAAGTACTTTTCAA+AGG	-	chr4_4:77378252-77378271	Msa0704860:intron	30.0%
!!	TTTTTGATTGCAGGAGAAAA+AGG	-	chr4_4:77378408-77378427	Msa0704860:intron	30.0%
	GCACTTTCTTAACTGTAATA+TGG	-	chr4_4:77378645-77378664	Msa0704860:intron	30.0%
	ACAATAGCAAAATTGCATGA+AGG	+	chr4_4:77378689-77378708	None:intergenic	30.0%
!	TTATTATCAAGACACTGACT+CGG	+	chr4_4:77378854-77378873	None:intergenic	30.0%
	TAATAACCAGCTTATTGAGA+TGG	-	chr4_4:77378868-77378887	Msa0704860:CDS	30.0%
	GAAAAATTCTTAATGCGAGA+TGG	-	chr4_4:77378898-77378917	Msa0704860:CDS	30.0%
!!	TCTATGTAATGTAATGGACC+CGG	+	chr4_4:77376897-77376916	None:intergenic	35.0%
	TTGCACAGACAGAAAAAACT+AGG	-	chr4_4:77376959-77376978	Msa0704860:three_prime_UTR	35.0%
	TGCACAGACAGAAAAAACTA+GGG	-	chr4_4:77376960-77376979	Msa0704860:three_prime_UTR	35.0%
	CAATTCCTCTGATCAAATCA+GGG	+	chr4_4:77377046-77377065	None:intergenic	35.0%
	TCACAGATGTATCACAAGAA+AGG	-	chr4_4:77377080-77377099	Msa0704860:three_prime_UTR	35.0%
!!	TGTATCACAAGAAAGGTATC+TGG	-	chr4_4:77377087-77377106	Msa0704860:three_prime_UTR	35.0%
!!	GTATCACAAGAAAGGTATCT+GGG	-	chr4_4:77377088-77377107	Msa0704860:three_prime_UTR	35.0%
!!	TGGTTTTTCAACAGCAGTTT+CGG	+	chr4_4:77377168-77377187	None:intergenic	35.0%
!	TCATCAGCAGGGTAAAATTT+TGG	+	chr4_4:77377191-77377210	None:intergenic	35.0%
!!!	TTGGGTCTTTTTTGTCTTCA+GGG	-	chr4_4:77377518-77377537	Msa0704860:intron	35.0%
	AAGGTTATCCACATTAACAC+TGG	+	chr4_4:77378233-77378252	None:intergenic	35.0%
	CGAATTCTTTGAGTCAGATA+AGG	-	chr4_4:77378306-77378325	Msa0704860:CDS	35.0%
	ATTCTTTGAGTCAGATAAGG+AGG	-	chr4_4:77378309-77378328	Msa0704860:CDS	35.0%
	ACTGTAATATGGAATTCTGC+TGG	-	chr4_4:77378656-77378675	Msa0704860:intron	35.0%
!	AGCATGCCAAAGGAAAATTT+TGG	-	chr4_4:77378760-77378779	Msa0704860:CDS	35.0%
!	CTGTCTCCAAAATTTTCCTT+TGG	+	chr4_4:77378769-77378788	None:intergenic	35.0%
!	GATGGAACTTGAAGTATTTC+AGG	-	chr4_4:77378916-77378935	Msa0704860:CDS	35.0%
!!	TCTATGTAATGTAATGGACC+CGG	+	chr4_4:77376897-77376916	None:intergenic	35.0%
	TTGCACAGACAGAAAAAACT+AGG	-	chr4_4:77376959-77376978	Msa0704860:three_prime_UTR	35.0%
	TGCACAGACAGAAAAAACTA+GGG	-	chr4_4:77376960-77376979	Msa0704860:three_prime_UTR	35.0%
	CAATTCCTCTGATCAAATCA+GGG	+	chr4_4:77377046-77377065	None:intergenic	35.0%
	TCACAGATGTATCACAAGAA+AGG	-	chr4_4:77377080-77377099	Msa0704860:three_prime_UTR	35.0%
!!	TGTATCACAAGAAAGGTATC+TGG	-	chr4_4:77377087-77377106	Msa0704860:three_prime_UTR	35.0%
!!	GTATCACAAGAAAGGTATCT+GGG	-	chr4_4:77377088-77377107	Msa0704860:three_prime_UTR	35.0%
!!	TGGTTTTTCAACAGCAGTTT+CGG	+	chr4_4:77377168-77377187	None:intergenic	35.0%
!	TCATCAGCAGGGTAAAATTT+TGG	+	chr4_4:77377191-77377210	None:intergenic	35.0%
!!!	TTGGGTCTTTTTTGTCTTCA+GGG	-	chr4_4:77377518-77377537	Msa0704860:intron	35.0%
	AAGGTTATCCACATTAACAC+TGG	+	chr4_4:77378233-77378252	None:intergenic	35.0%
	CGAATTCTTTGAGTCAGATA+AGG	-	chr4_4:77378306-77378325	Msa0704860:CDS	35.0%
	ATTCTTTGAGTCAGATAAGG+AGG	-	chr4_4:77378309-77378328	Msa0704860:CDS	35.0%
	ACTGTAATATGGAATTCTGC+TGG	-	chr4_4:77378656-77378675	Msa0704860:intron	35.0%
!	AGCATGCCAAAGGAAAATTT+TGG	-	chr4_4:77378760-77378779	Msa0704860:CDS	35.0%
!	CTGTCTCCAAAATTTTCCTT+TGG	+	chr4_4:77378769-77378788	None:intergenic	35.0%
!	GATGGAACTTGAAGTATTTC+AGG	-	chr4_4:77378916-77378935	Msa0704860:CDS	35.0%
!!	CTATGTAATGTAATGGACCC+GGG	+	chr4_4:77376896-77376915	None:intergenic	40.0%
	AAGATAGTCTCTGTGTTGTG+TGG	+	chr4_4:77376927-77376946	None:intergenic	40.0%
	TTTGCATTTCGTAGCAGCAA+TGG	-	chr4_4:77376983-77377002	Msa0704860:three_prime_UTR	40.0%
	CTCTGATCAAATCAGGGTTT+CGG	+	chr4_4:77377040-77377059	None:intergenic	40.0%
	CCAATTCCTCTGATCAAATC+AGG	+	chr4_4:77377047-77377066	None:intergenic	40.0%
!	CCTGATTTGATCAGAGGAAT+TGG	-	chr4_4:77377044-77377063	Msa0704860:three_prime_UTR	40.0%
!!	GAAAGGTATCTGGGCTATTA+AGG	-	chr4_4:77377097-77377116	Msa0704860:three_prime_UTR	40.0%
	TGGGCTATTAAGGCCAAAAA+TGG	-	chr4_4:77377107-77377126	Msa0704860:three_prime_UTR	40.0%
	GCTATTAAGGCCAAAAATGG+TGG	-	chr4_4:77377110-77377129	Msa0704860:three_prime_UTR	40.0%
!	TAGGTTTAGGATCATGACGA+GGG	+	chr4_4:77377142-77377161	None:intergenic	40.0%
!	TTAGGTTTAGGATCATGACG+AGG	+	chr4_4:77377143-77377162	None:intergenic	40.0%
!!	GGTTTTTCAACAGCAGTTTC+GGG	+	chr4_4:77377167-77377186	None:intergenic	40.0%
!	TCAGCAGGGTAAAATTTTGG+TGG	+	chr4_4:77377188-77377207	None:intergenic	40.0%
!!!	GTTGGGTCTTTTTTGTCTTC+AGG	-	chr4_4:77377517-77377536	Msa0704860:intron	40.0%
	TCTTCTTGCCGGTAGATTTA+AGG	-	chr4_4:77377569-77377588	Msa0704860:intron	40.0%
	CTTCTTGCCGGTAGATTTAA+GGG	-	chr4_4:77377570-77377589	Msa0704860:intron	40.0%
!!!	TTTTTGAAGCAGCTTCCTTC+TGG	-	chr4_4:77377606-77377625	Msa0704860:intron	40.0%
	GTTACAAGAAGCAATCCAGA+AGG	+	chr4_4:77377624-77377643	None:intergenic	40.0%
	TCTGGATTGCTTCTTGTAAC+TGG	-	chr4_4:77377624-77377643	Msa0704860:CDS	40.0%
!	GGTTGATGTACCAATCACAT+AGG	+	chr4_4:77378197-77378216	None:intergenic	40.0%
!!	AACACTGGAGATATCGACTT+TGG	+	chr4_4:77378218-77378237	None:intergenic	40.0%
	CGATATCTCCAGTGTTAATG+TGG	-	chr4_4:77378222-77378241	Msa0704860:intron	40.0%
!!!	TCCCTTGCTCTTCTTTTTTG+GGG	+	chr4_4:77378281-77378300	None:intergenic	40.0%
!!!	CTCCCTTGCTCTTCTTTTTT+GGG	+	chr4_4:77378282-77378301	None:intergenic	40.0%
!!!	TCTCCCTTGCTCTTCTTTTT+TGG	+	chr4_4:77378283-77378302	None:intergenic	40.0%
	AAAAAGAAGAGCAAGGGAGA+AGG	-	chr4_4:77378283-77378302	Msa0704860:intron	40.0%
	GTTATGCTCATTGCTTCTGT+TGG	-	chr4_4:77378370-77378389	Msa0704860:CDS	40.0%
	GAAAGATGACCAGAAAACAG+TGG	-	chr4_4:77378447-77378466	Msa0704860:intron	40.0%
	CCAAGATAAGTCTTCAAGTC+TGG	+	chr4_4:77378505-77378524	None:intergenic	40.0%
	CCAGACTTGAAGACTTATCT+TGG	-	chr4_4:77378502-77378521	Msa0704860:intron	40.0%
!!	TCTTCTAGTTTGGAGGAAAG+AGG	-	chr4_4:77378569-77378588	Msa0704860:intron	40.0%
!!	CTTCTAGTTTGGAGGAAAGA+GGG	-	chr4_4:77378570-77378589	Msa0704860:intron	40.0%
!!	AAGACACTGACTCGGATAAA+GGG	+	chr4_4:77378846-77378865	None:intergenic	40.0%
	TCAGTTCCATCTCAATAAGC+TGG	+	chr4_4:77378877-77378896	None:intergenic	40.0%
	TTTCAACGGGTACACATGAT+AGG	+	chr4_4:77378947-77378966	None:intergenic	40.0%
!!	CTATGTAATGTAATGGACCC+GGG	+	chr4_4:77376896-77376915	None:intergenic	40.0%
	AAGATAGTCTCTGTGTTGTG+TGG	+	chr4_4:77376927-77376946	None:intergenic	40.0%
	TTTGCATTTCGTAGCAGCAA+TGG	-	chr4_4:77376983-77377002	Msa0704860:three_prime_UTR	40.0%
	CTCTGATCAAATCAGGGTTT+CGG	+	chr4_4:77377040-77377059	None:intergenic	40.0%
	CCAATTCCTCTGATCAAATC+AGG	+	chr4_4:77377047-77377066	None:intergenic	40.0%
!	CCTGATTTGATCAGAGGAAT+TGG	-	chr4_4:77377044-77377063	Msa0704860:three_prime_UTR	40.0%
!!	GAAAGGTATCTGGGCTATTA+AGG	-	chr4_4:77377097-77377116	Msa0704860:three_prime_UTR	40.0%
	TGGGCTATTAAGGCCAAAAA+TGG	-	chr4_4:77377107-77377126	Msa0704860:three_prime_UTR	40.0%
	GCTATTAAGGCCAAAAATGG+TGG	-	chr4_4:77377110-77377129	Msa0704860:three_prime_UTR	40.0%
!	TAGGTTTAGGATCATGACGA+GGG	+	chr4_4:77377142-77377161	None:intergenic	40.0%
!	TTAGGTTTAGGATCATGACG+AGG	+	chr4_4:77377143-77377162	None:intergenic	40.0%
!!	GGTTTTTCAACAGCAGTTTC+GGG	+	chr4_4:77377167-77377186	None:intergenic	40.0%
!	TCAGCAGGGTAAAATTTTGG+TGG	+	chr4_4:77377188-77377207	None:intergenic	40.0%
!!!	GTTGGGTCTTTTTTGTCTTC+AGG	-	chr4_4:77377517-77377536	Msa0704860:intron	40.0%
	TCTTCTTGCCGGTAGATTTA+AGG	-	chr4_4:77377569-77377588	Msa0704860:intron	40.0%
	CTTCTTGCCGGTAGATTTAA+GGG	-	chr4_4:77377570-77377589	Msa0704860:intron	40.0%
!!!	TTTTTGAAGCAGCTTCCTTC+TGG	-	chr4_4:77377606-77377625	Msa0704860:intron	40.0%
	GTTACAAGAAGCAATCCAGA+AGG	+	chr4_4:77377624-77377643	None:intergenic	40.0%
	TCTGGATTGCTTCTTGTAAC+TGG	-	chr4_4:77377624-77377643	Msa0704860:CDS	40.0%
!	GGTTGATGTACCAATCACAT+AGG	+	chr4_4:77378197-77378216	None:intergenic	40.0%
!!	AACACTGGAGATATCGACTT+TGG	+	chr4_4:77378218-77378237	None:intergenic	40.0%
	CGATATCTCCAGTGTTAATG+TGG	-	chr4_4:77378222-77378241	Msa0704860:intron	40.0%
!!!	TCCCTTGCTCTTCTTTTTTG+GGG	+	chr4_4:77378281-77378300	None:intergenic	40.0%
!!!	CTCCCTTGCTCTTCTTTTTT+GGG	+	chr4_4:77378282-77378301	None:intergenic	40.0%
!!!	TCTCCCTTGCTCTTCTTTTT+TGG	+	chr4_4:77378283-77378302	None:intergenic	40.0%
	AAAAAGAAGAGCAAGGGAGA+AGG	-	chr4_4:77378283-77378302	Msa0704860:intron	40.0%
	GTTATGCTCATTGCTTCTGT+TGG	-	chr4_4:77378370-77378389	Msa0704860:CDS	40.0%
	GAAAGATGACCAGAAAACAG+TGG	-	chr4_4:77378447-77378466	Msa0704860:intron	40.0%
	CCAAGATAAGTCTTCAAGTC+TGG	+	chr4_4:77378505-77378524	None:intergenic	40.0%
	CCAGACTTGAAGACTTATCT+TGG	-	chr4_4:77378502-77378521	Msa0704860:intron	40.0%
!!	TCTTCTAGTTTGGAGGAAAG+AGG	-	chr4_4:77378569-77378588	Msa0704860:intron	40.0%
!!	CTTCTAGTTTGGAGGAAAGA+GGG	-	chr4_4:77378570-77378589	Msa0704860:intron	40.0%
!!	AAGACACTGACTCGGATAAA+GGG	+	chr4_4:77378846-77378865	None:intergenic	40.0%
	TCAGTTCCATCTCAATAAGC+TGG	+	chr4_4:77378877-77378896	None:intergenic	40.0%
	TTTCAACGGGTACACATGAT+AGG	+	chr4_4:77378947-77378966	None:intergenic	40.0%
!	CGAAACCCTGATTTGATCAG+AGG	-	chr4_4:77377038-77377057	Msa0704860:three_prime_UTR	45.0%
!	AGGGAAAACGCCACCATTTT+TGG	+	chr4_4:77377123-77377142	None:intergenic	45.0%
	GCTTCTTCACATCATCAGCA+GGG	+	chr4_4:77377202-77377221	None:intergenic	45.0%
	AACCTGAGCTTAGTCTGCTT+AGG	+	chr4_4:77377245-77377264	None:intergenic	45.0%
	AAGAAGAATCAGCACTGTGC+CGG	+	chr4_4:77377556-77377575	None:intergenic	45.0%
!!	ACAGTGCTGATTCTTCTTGC+CGG	-	chr4_4:77377558-77377577	Msa0704860:intron	45.0%
	CCTCTTGCCCTTAAATCTAC+CGG	+	chr4_4:77377580-77377599	None:intergenic	45.0%
	CGGTAGATTTAAGGGCAAGA+GGG	-	chr4_4:77377578-77377597	Msa0704860:intron	45.0%
	TAGATTTAAGGGCAAGAGGG+TGG	-	chr4_4:77377581-77377600	Msa0704860:intron	45.0%
	TTAACAGGCACCACTTGTCT+TGG	-	chr4_4:77378089-77378108	Msa0704860:intron	45.0%
	TGAAGAGAAGCCAAGACAAG+TGG	+	chr4_4:77378102-77378121	None:intergenic	45.0%
	TCAGGTCCCTTCAAGATCAA+CGG	-	chr4_4:77378145-77378164	Msa0704860:intron	45.0%
	GGAACTCCGTTGATCTTGAA+GGG	+	chr4_4:77378154-77378173	None:intergenic	45.0%
	AGGAACTCCGTTGATCTTGA+AGG	+	chr4_4:77378155-77378174	None:intergenic	45.0%
!!	TCCTTTGAGACGTGTGAATC+AGG	-	chr4_4:77378171-77378190	Msa0704860:intron	45.0%
	GTGAATCAGGCCTATGTGAT+TGG	-	chr4_4:77378184-77378203	Msa0704860:intron	45.0%
	AGCCCCAAAAAAGAAGAGCA+AGG	-	chr4_4:77378276-77378295	Msa0704860:intron	45.0%
	GCCCCAAAAAAGAAGAGCAA+GGG	-	chr4_4:77378277-77378296	Msa0704860:intron	45.0%
	TGGTCATCTTTCTTCTGCTG+AGG	+	chr4_4:77378439-77378458	None:intergenic	45.0%
!!	TGAAGACTTATCTTGGTGCC+AGG	-	chr4_4:77378509-77378528	Msa0704860:intron	45.0%
	AACTAGAAGACGAGTTCGTG+TGG	+	chr4_4:77378559-77378578	None:intergenic	45.0%
!	CACGAACTCGTCTTCTAGTT+TGG	-	chr4_4:77378559-77378578	Msa0704860:intron	45.0%
!!	GAACTCGTCTTCTAGTTTGG+AGG	-	chr4_4:77378562-77378581	Msa0704860:intron	45.0%
	CTTTCACTTGAGCATGCCAA+AGG	-	chr4_4:77378750-77378769	Msa0704860:CDS	45.0%
!!	AGACACTGACTCGGATAAAG+GGG	+	chr4_4:77378845-77378864	None:intergenic	45.0%
!!	CAAGACACTGACTCGGATAA+AGG	+	chr4_4:77378847-77378866	None:intergenic	45.0%
!	CGAAACCCTGATTTGATCAG+AGG	-	chr4_4:77377038-77377057	Msa0704860:three_prime_UTR	45.0%
!	AGGGAAAACGCCACCATTTT+TGG	+	chr4_4:77377123-77377142	None:intergenic	45.0%
	GCTTCTTCACATCATCAGCA+GGG	+	chr4_4:77377202-77377221	None:intergenic	45.0%
	AACCTGAGCTTAGTCTGCTT+AGG	+	chr4_4:77377245-77377264	None:intergenic	45.0%
	AAGAAGAATCAGCACTGTGC+CGG	+	chr4_4:77377556-77377575	None:intergenic	45.0%
!!	ACAGTGCTGATTCTTCTTGC+CGG	-	chr4_4:77377558-77377577	Msa0704860:intron	45.0%
	CCTCTTGCCCTTAAATCTAC+CGG	+	chr4_4:77377580-77377599	None:intergenic	45.0%
	CGGTAGATTTAAGGGCAAGA+GGG	-	chr4_4:77377578-77377597	Msa0704860:intron	45.0%
	TAGATTTAAGGGCAAGAGGG+TGG	-	chr4_4:77377581-77377600	Msa0704860:intron	45.0%
	TTAACAGGCACCACTTGTCT+TGG	-	chr4_4:77378089-77378108	Msa0704860:intron	45.0%
	TGAAGAGAAGCCAAGACAAG+TGG	+	chr4_4:77378102-77378121	None:intergenic	45.0%
	TCAGGTCCCTTCAAGATCAA+CGG	-	chr4_4:77378145-77378164	Msa0704860:intron	45.0%
	GGAACTCCGTTGATCTTGAA+GGG	+	chr4_4:77378154-77378173	None:intergenic	45.0%
	AGGAACTCCGTTGATCTTGA+AGG	+	chr4_4:77378155-77378174	None:intergenic	45.0%
!!	TCCTTTGAGACGTGTGAATC+AGG	-	chr4_4:77378171-77378190	Msa0704860:intron	45.0%
	GTGAATCAGGCCTATGTGAT+TGG	-	chr4_4:77378184-77378203	Msa0704860:intron	45.0%
	AGCCCCAAAAAAGAAGAGCA+AGG	-	chr4_4:77378276-77378295	Msa0704860:intron	45.0%
	GCCCCAAAAAAGAAGAGCAA+GGG	-	chr4_4:77378277-77378296	Msa0704860:intron	45.0%
	TGGTCATCTTTCTTCTGCTG+AGG	+	chr4_4:77378439-77378458	None:intergenic	45.0%
!!	TGAAGACTTATCTTGGTGCC+AGG	-	chr4_4:77378509-77378528	Msa0704860:intron	45.0%
	AACTAGAAGACGAGTTCGTG+TGG	+	chr4_4:77378559-77378578	None:intergenic	45.0%
!	CACGAACTCGTCTTCTAGTT+TGG	-	chr4_4:77378559-77378578	Msa0704860:intron	45.0%
!!	GAACTCGTCTTCTAGTTTGG+AGG	-	chr4_4:77378562-77378581	Msa0704860:intron	45.0%
	CTTTCACTTGAGCATGCCAA+AGG	-	chr4_4:77378750-77378769	Msa0704860:CDS	45.0%
!!	AGACACTGACTCGGATAAAG+GGG	+	chr4_4:77378845-77378864	None:intergenic	45.0%
!!	CAAGACACTGACTCGGATAA+AGG	+	chr4_4:77378847-77378866	None:intergenic	45.0%
!!	GTTAAAAAAAAAAAAAAAAA+AGG	+	chr4_4:77378074-77378093	None:intergenic	5.0%
!!!	TTTTTTTTTTTTTTTTTAAC+AGG	-	chr4_4:77378074-77378093	Msa0704860:intron	5.0%
!!	GTTAAAAAAAAAAAAAAAAA+AGG	+	chr4_4:77378074-77378093	None:intergenic	5.0%
!!!	TTTTTTTTTTTTTTTTTAAC+AGG	-	chr4_4:77378074-77378093	Msa0704860:intron	5.0%
	GCAGTTTCGGGCTTAGGTTT+AGG	+	chr4_4:77377155-77377174	None:intergenic	50.0%
	TCAACAGCAGTTTCGGGCTT+AGG	+	chr4_4:77377161-77377180	None:intergenic	50.0%
	GGCTTCTTCACATCATCAGC+AGG	+	chr4_4:77377203-77377222	None:intergenic	50.0%
!	GGCTTATGCTTGTTGCGAAG+AGG	+	chr4_4:77377224-77377243	None:intergenic	50.0%
	AGCCTAAGCAGACTAAGCTC+AGG	-	chr4_4:77377240-77377259	Msa0704860:three_prime_UTR	50.0%
	AGAAGAATCAGCACTGTGCC+GGG	+	chr4_4:77377555-77377574	None:intergenic	50.0%
	CCGGTAGATTTAAGGGCAAG+AGG	-	chr4_4:77377577-77377596	Msa0704860:intron	50.0%
	GCCTGATTCACACGTCTCAA+AGG	+	chr4_4:77378175-77378194	None:intergenic	50.0%
!	ATGCAGCGTCCACTGTTTTC+TGG	+	chr4_4:77378459-77378478	None:intergenic	50.0%
!!	TGGTGCCAGGTTTTCTCTCA+AGG	-	chr4_4:77378522-77378541	Msa0704860:intron	50.0%
	ACCTGCCTTGAGAGAAAACC+TGG	+	chr4_4:77378530-77378549	None:intergenic	50.0%
	GCAGTTTCGGGCTTAGGTTT+AGG	+	chr4_4:77377155-77377174	None:intergenic	50.0%
	TCAACAGCAGTTTCGGGCTT+AGG	+	chr4_4:77377161-77377180	None:intergenic	50.0%
	GGCTTCTTCACATCATCAGC+AGG	+	chr4_4:77377203-77377222	None:intergenic	50.0%
!	GGCTTATGCTTGTTGCGAAG+AGG	+	chr4_4:77377224-77377243	None:intergenic	50.0%
	AGCCTAAGCAGACTAAGCTC+AGG	-	chr4_4:77377240-77377259	Msa0704860:three_prime_UTR	50.0%
	AGAAGAATCAGCACTGTGCC+GGG	+	chr4_4:77377555-77377574	None:intergenic	50.0%
	CCGGTAGATTTAAGGGCAAG+AGG	-	chr4_4:77377577-77377596	Msa0704860:intron	50.0%
	GCCTGATTCACACGTCTCAA+AGG	+	chr4_4:77378175-77378194	None:intergenic	50.0%
!	ATGCAGCGTCCACTGTTTTC+TGG	+	chr4_4:77378459-77378478	None:intergenic	50.0%
!!	TGGTGCCAGGTTTTCTCTCA+AGG	-	chr4_4:77378522-77378541	Msa0704860:intron	50.0%
	ACCTGCCTTGAGAGAAAACC+TGG	+	chr4_4:77378530-77378549	None:intergenic	50.0%
	TCAGGGTTTCGGCTAACCCT+GGG	+	chr4_4:77377029-77377048	None:intergenic	55.0%
	ATCAGGGTTTCGGCTAACCC+TGG	+	chr4_4:77377030-77377049	None:intergenic	55.0%
	TTCAGGGCAAGCATCACTCC+CGG	-	chr4_4:77377534-77377553	Msa0704860:intron	55.0%
!	GCCAGGTTTTCTCTCAAGGC+AGG	-	chr4_4:77378526-77378545	Msa0704860:intron	55.0%
!!	CTGACTCGGATAAAGGGGCA+GGG	+	chr4_4:77378840-77378859	None:intergenic	55.0%
!!	ACTGACTCGGATAAAGGGGC+AGG	+	chr4_4:77378841-77378860	None:intergenic	55.0%
	TCAGGGTTTCGGCTAACCCT+GGG	+	chr4_4:77377029-77377048	None:intergenic	55.0%
	ATCAGGGTTTCGGCTAACCC+TGG	+	chr4_4:77377030-77377049	None:intergenic	55.0%
	TTCAGGGCAAGCATCACTCC+CGG	-	chr4_4:77377534-77377553	Msa0704860:intron	55.0%
!	GCCAGGTTTTCTCTCAAGGC+AGG	-	chr4_4:77378526-77378545	Msa0704860:intron	55.0%
!!	CTGACTCGGATAAAGGGGCA+GGG	+	chr4_4:77378840-77378859	None:intergenic	55.0%
!!	ACTGACTCGGATAAAGGGGC+AGG	+	chr4_4:77378841-77378860	None:intergenic	55.0%
	CTGGGTGCTCTCTGCTTCGT+CGG	+	chr4_4:77377011-77377030	None:intergenic	60.0%
!!	GACGAAGCAGAGAGCACCCA+GGG	-	chr4_4:77377010-77377029	Msa0704860:three_prime_UTR	60.0%
	CTGGGTGCTCTCTGCTTCGT+CGG	+	chr4_4:77377011-77377030	None:intergenic	60.0%
!!	GACGAAGCAGAGAGCACCCA+GGG	-	chr4_4:77377010-77377029	Msa0704860:three_prime_UTR	60.0%
!!	CGACGAAGCAGAGAGCACCC+AGG	-	chr4_4:77377009-77377028	Msa0704860:three_prime_UTR	65.0%
!!	CGACGAAGCAGAGAGCACCC+AGG	-	chr4_4:77377009-77377028	Msa0704860:three_prime_UTR	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_4	gene	77376893	77379046	77376893	ID=Msa0704860;Name=Msa0704860
chr4_4	mRNA	77376893	77379046	77376893	ID=Msa0704860-mRNA-1;Parent=Msa0704860;Name=Msa0704860-mRNA-1;_AED=0.05;_eAED=0.05;_QI=109\|1\|1\|1\|1\|1\|4\|470\|234
chr4_4	exon	77376893	77377518	77376893	ID=Msa0704860-mRNA-1:exon:24487;Parent=Msa0704860-mRNA-1
chr4_4	exon	77377609	77377790	77377609	ID=Msa0704860-mRNA-1:exon:24486;Parent=Msa0704860-mRNA-1
chr4_4	exon	77378294	77378400	77378294	ID=Msa0704860-mRNA-1:exon:24485;Parent=Msa0704860-mRNA-1
chr4_4	exon	77378678	77379046	77378678	ID=Msa0704860-mRNA-1:exon:24484;Parent=Msa0704860-mRNA-1
chr4_4	five_prime_UTR	77378938	77379046	77378938	ID=Msa0704860-mRNA-1:five_prime_utr;Parent=Msa0704860-mRNA-1
chr4_4	CDS	77378678	77378937	77378678	ID=Msa0704860-mRNA-1:cds;Parent=Msa0704860-mRNA-1
chr4_4	CDS	77378294	77378400	77378294	ID=Msa0704860-mRNA-1:cds;Parent=Msa0704860-mRNA-1
chr4_4	CDS	77377609	77377790	77377609	ID=Msa0704860-mRNA-1:cds;Parent=Msa0704860-mRNA-1
chr4_4	CDS	77377363	77377518	77377363	ID=Msa0704860-mRNA-1:cds;Parent=Msa0704860-mRNA-1
chr4_4	three_prime_UTR	77376893	77377362	77376893	ID=Msa0704860-mRNA-1:three_prime_utr;Parent=Msa0704860-mRNA-1

Gene Sequence

>Msa0704860

ATGGCGCCGACGAAGCAGAGAGCACCCAGGGTTAGCCGAAACCCTGATTTGATCAGAGGAATTGGAAAGTTCTCAAAGTCACAGATGTATCACAAGAAAGGTATCTGGGCTATTAAGGCCAAAAATGGTGGCGTTTTCCCTCGTCATGATCCTAAACCTAAGCCCGAAACTGCTGTTGAAAAACCACCAAAATTTTACCCTGCTGATGATGTGAAGAAGCCTCTTCGCAACAAGCATAAGCCTAAGCAGACTAAGCTCAGGGCAAGCATCACTCCCGGCACAGTGCTGATTCTTCTTGCCGGTAGATTTAAGGGCAAGAGGGTGGTGTTTTTGAAGCAGCTTCCTTCTGGATTGCTTCTTGTAACTGGTCCCTTCAAGATCAACGGAGTTCCTTTGAGACGTGTGAATCAGGCCTATGTGATTGGTACATCAACCAAAGTCGATATCTCCAGTGTTAATGTGGATAACCTTGATGACAAGTACTTTTCAAAGGAAGCCCCAAAAAAGAAGAGCAAGGGAGAAGGCGAATTCTTTGAGTCAGATAAGGAGGAGAAAAAGGCGTTACCTCAGCAGAAGAAAGATGACCAGAAAACAGTGGACGCTGCATTGATAAAAGCTATTGAGAGCGTTCCAGACTTGAAGACTTATCTTGGTGCCAGGTTTTCTCTCAAGGCAGGTGTGAAGCCACACGAACTCGTCTTCTAG

Protein sequence

>Msa0704860

MAPTKQRAPRVSRNPDLIRGIGKFSKSQMYHKKGIWAIKAKNGGVFPRHDPKPKPETAVEKPPKFYPADDVKKPLRNKHKPKQTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISSVNVDNLDDKYFSKEAPKKKSKGEGEFFESDKEEKKALPQQKKDDQKTVDAALIKAIESVPDLKTYLGARFSLKAGVKPHELVF*