Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0281330 | XP_013463254.1 | 100.000 | 81 | 0 | 0 | 1 | 81 | 1 | 81 | 4.28e-54 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0281330 | sp|Q3E902|RS212_ARATH | 85.185 | 81 | 12 | 0 | 1 | 81 | 1 | 81 | 9.26e-50 | 154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0281330 | B7FGU9 | 100.000 | 81 | 0 | 0 | 1 | 81 | 1 | 81 | 2.04e-54 | 172 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0281330 | 0.812938 | 3.295555e-51 | -8.615850e-47 |
| Msa0002430 | Msa0281330 | 0.815531 | 8.813783e-52 | -8.615850e-47 |
| Msa0027590 | Msa0281330 | 0.849628 | 2.861419e-60 | -8.615850e-47 |
| Msa0027610 | Msa0281330 | -0.807902 | 4.028854e-50 | -8.615850e-47 |
| Msa0044010 | Msa0281330 | 0.864533 | 1.135738e-64 | -8.615850e-47 |
| Msa0071640 | Msa0281330 | 0.844955 | 5.487262e-59 | -8.615850e-47 |
| Msa0071760 | Msa0281330 | 0.828652 | 7.980647e-55 | -8.615850e-47 |
| Msa0072570 | Msa0281330 | 0.848675 | 5.269440e-60 | -8.615850e-47 |
| Msa0075350 | Msa0281330 | 0.809206 | 2.121733e-50 | -8.615850e-47 |
| Msa0075370 | Msa0281330 | -0.809154 | 2.177047e-50 | -8.615850e-47 |
| Msa0076630 | Msa0281330 | 0.817200 | 3.730620e-52 | -8.615850e-47 |
| Msa0077320 | Msa0281330 | 0.800016 | 1.756371e-48 | -8.615850e-47 |
| Msa0087910 | Msa0281330 | 0.814121 | 1.810645e-51 | -8.615850e-47 |
| Msa0089540 | Msa0281330 | 0.836631 | 8.357379e-57 | -8.615850e-47 |
| Msa0090580 | Msa0281330 | 0.820670 | 6.068268e-53 | -8.615850e-47 |
| Msa0099090 | Msa0281330 | -0.813791 | 2.140877e-51 | -8.615850e-47 |
| Msa0114570 | Msa0281330 | 0.841636 | 4.214126e-58 | -8.615850e-47 |
| Msa0114600 | Msa0281330 | 0.897194 | 1.780222e-76 | -8.615850e-47 |
| Msa0123310 | Msa0281330 | -0.831750 | 1.398284e-55 | -8.615850e-47 |
| Msa0132460 | Msa0281330 | 0.828839 | 7.193762e-55 | -8.615850e-47 |
| Msa0134580 | Msa0281330 | 0.832191 | 1.088082e-55 | -8.615850e-47 |
| Msa0167860 | Msa0281330 | 0.891318 | 4.433094e-74 | -8.615850e-47 |
| Msa0169710 | Msa0281330 | 0.851208 | 1.030920e-60 | -8.615850e-47 |
| Msa0172930 | Msa0281330 | 0.804202 | 2.418696e-49 | -8.615850e-47 |
| Msa0182050 | Msa0281330 | 0.824801 | 6.630117e-54 | -8.615850e-47 |
| Msa0182100 | Msa0281330 | 0.815961 | 7.070210e-52 | -8.615850e-47 |
| Msa0183840 | Msa0281330 | 0.895617 | 8.080397e-76 | -8.615850e-47 |
| Msa0186740 | Msa0281330 | 0.838409 | 2.925386e-57 | -8.615850e-47 |
| Msa0187810 | Msa0281330 | 0.889724 | 1.873583e-73 | -8.615850e-47 |
| Msa0188740 | Msa0281330 | 0.809437 | 1.893469e-50 | -8.615850e-47 |
| Msa0191450 | Msa0281330 | 0.833612 | 4.825867e-56 | -8.615850e-47 |
| Msa0191550 | Msa0281330 | 0.859940 | 2.921640e-63 | -8.615850e-47 |
| Msa0192300 | Msa0281330 | 0.815908 | 7.265017e-52 | -8.615850e-47 |
| Msa0192750 | Msa0281330 | 0.810444 | 1.149120e-50 | -8.615850e-47 |
| Msa0194940 | Msa0281330 | 0.866729 | 2.303750e-65 | -8.615850e-47 |
| Msa0195030 | Msa0281330 | 0.846717 | 1.823070e-59 | -8.615850e-47 |
| Msa0235050 | Msa0281330 | 0.864450 | 1.205755e-64 | -8.615850e-47 |
| Msa0237180 | Msa0281330 | 0.846984 | 1.540846e-59 | -8.615850e-47 |
| Msa0239420 | Msa0281330 | 0.843745 | 1.159583e-58 | -8.615850e-47 |
| Msa0270160 | Msa0281330 | 0.812982 | 3.223050e-51 | -8.615850e-47 |
| Msa0274940 | Msa0281330 | 0.817789 | 2.747808e-52 | -8.615850e-47 |
| Msa0277600 | Msa0281330 | 0.860540 | 1.923257e-63 | -8.615850e-47 |
| Msa0281330 | Msa0281370 | 0.966104 | 1.774601e-125 | -8.615850e-47 |
| Msa0281330 | Msa0301250 | 0.808393 | 3.167044e-50 | -8.615850e-47 |
| Msa0281330 | Msa0312210 | 0.836216 | 1.065385e-56 | -8.615850e-47 |
| Msa0281330 | Msa0313060 | 0.851067 | 1.129879e-60 | -8.615850e-47 |
| Msa0281330 | Msa0315430 | 0.854151 | 1.489670e-61 | -8.615850e-47 |
| Msa0281330 | Msa0315660 | 0.848083 | 7.682295e-60 | -8.615850e-47 |
| Msa0281330 | Msa0340560 | 0.825815 | 3.815989e-54 | -8.615850e-47 |
| Msa0281330 | Msa0371490 | 0.836448 | 9.301981e-57 | -8.615850e-47 |
| Msa0281330 | Msa0376850 | 0.807148 | 5.822513e-50 | -8.615850e-47 |
| Msa0281330 | Msa0377370 | 0.856282 | 3.574457e-62 | -8.615850e-47 |
| Msa0281330 | Msa0377520 | 0.843405 | 1.429539e-58 | -8.615850e-47 |
| Msa0281330 | Msa0378620 | -0.803707 | 3.065238e-49 | -8.615850e-47 |
| Msa0281330 | Msa0419710 | 0.838322 | 3.080273e-57 | -8.615850e-47 |
| Msa0281330 | Msa0426090 | 0.847164 | 1.375340e-59 | -8.615850e-47 |
| Msa0281330 | Msa0426250 | 0.852923 | 3.356020e-61 | -8.615850e-47 |
| Msa0281330 | Msa0432260 | -0.807586 | 4.700911e-50 | -8.615850e-47 |
| Msa0281330 | Msa0433060 | 0.801414 | 9.107037e-49 | -8.615850e-47 |
| Msa0281330 | Msa0450150 | 0.845904 | 3.035163e-59 | -8.615850e-47 |
| Msa0281330 | Msa0472480 | 0.840336 | 9.245131e-58 | -8.615850e-47 |
| Msa0281330 | Msa0516830 | 0.807622 | 4.620561e-50 | -8.615850e-47 |
| Msa0281330 | Msa0517480 | 0.827536 | 1.481791e-54 | -8.615850e-47 |
| Msa0281330 | Msa0526490 | -0.812939 | 3.293461e-51 | -8.615850e-47 |
| Msa0281330 | Msa0529900 | 0.800197 | 1.613393e-48 | -8.615850e-47 |
| Msa0281330 | Msa0547920 | 0.880588 | 4.849412e-70 | -8.615850e-47 |
| Msa0281330 | Msa0550420 | 0.860673 | 1.753682e-63 | -8.615850e-47 |
| Msa0281330 | Msa0550490 | 0.865991 | 3.950076e-65 | -8.615850e-47 |
| Msa0281330 | Msa0573550 | 0.882905 | 7.039003e-71 | -8.615850e-47 |
| Msa0281330 | Msa0574780 | 0.818178 | 2.244110e-52 | -8.615850e-47 |
| Msa0281330 | Msa0597240 | 0.817427 | 3.317134e-52 | -8.615850e-47 |
| Msa0281330 | Msa0602900 | 0.867806 | 1.042907e-65 | -8.615850e-47 |
| Msa0281330 | Msa0605890 | 0.911207 | 7.894852e-83 | -8.615850e-47 |
| Msa0281330 | Msa0619230 | 0.831569 | 1.549718e-55 | -8.615850e-47 |
| Msa0281330 | Msa0622230 | 0.859426 | 4.171372e-63 | -8.615850e-47 |
| Msa0281330 | Msa0643960 | 0.876124 | 1.792193e-68 | -8.615850e-47 |
| Msa0281330 | Msa0681220 | 0.800136 | 1.660508e-48 | -8.615850e-47 |
| Msa0281330 | Msa0686550 | 0.849540 | 3.028169e-60 | -8.615850e-47 |
| Msa0281330 | Msa0686660 | 0.823351 | 1.451421e-53 | -8.615850e-47 |
| Msa0281330 | Msa0694400 | 0.808656 | 2.782679e-50 | -8.615850e-47 |
| Msa0281330 | Msa0704860 | 0.849234 | 3.685108e-60 | -8.615850e-47 |
| Msa0281330 | Msa0708630 | 0.828563 | 8.387759e-55 | -8.615850e-47 |
| Msa0281330 | Msa0748350 | 0.858748 | 6.656893e-63 | -8.615850e-47 |
| Msa0281330 | Msa0788380 | 0.810710 | 1.006801e-50 | -8.615850e-47 |
| Msa0281330 | Msa0790450 | 0.855227 | 7.268775e-62 | -8.615850e-47 |
| Msa0281330 | Msa0796490 | 0.806899 | 6.574719e-50 | -8.615850e-47 |
| Msa0281330 | Msa0834220 | 0.806268 | 8.934086e-50 | -8.615850e-47 |
| Msa0281330 | Msa0835190 | 0.800107 | 1.683383e-48 | -8.615850e-47 |
| Msa0281330 | Msa0902220 | 0.886844 | 2.400510e-72 | -8.615850e-47 |
| Msa0281330 | Msa0927910 | 0.894903 | 1.590378e-75 | -8.615850e-47 |
| Msa0281330 | Msa0929700 | 0.888502 | 5.580388e-73 | -8.615850e-47 |
| Msa0281330 | Msa0930890 | 0.845020 | 5.268356e-59 | -8.615850e-47 |
| Msa0281330 | Msa1019110 | 0.826580 | 2.508888e-54 | -8.615850e-47 |
| Msa0281330 | Msa1025200 | 0.815235 | 1.025576e-51 | -8.615850e-47 |
| Msa0281330 | Msa1025220 | 0.812392 | 4.338838e-51 | -8.615850e-47 |
| Msa0281330 | Msa1040160 | 0.831271 | 1.835339e-55 | -8.615850e-47 |
| Msa0281330 | Msa1041680 | 0.804182 | 2.442168e-49 | -8.615850e-47 |
| Msa0281330 | Msa1047020 | 0.814644 | 1.386788e-51 | -8.615850e-47 |
| Msa0281330 | Msa1050100 | 0.832102 | 1.144730e-55 | -8.615850e-47 |
| Msa0281330 | Msa1083370 | 0.811812 | 5.805612e-51 | -8.615850e-47 |
| Msa0281330 | Msa1085850 | 0.822759 | 1.994558e-53 | -8.615850e-47 |
| Msa0281330 | Msa1116940 | 0.807523 | 4.848732e-50 | -8.615850e-47 |
| Msa0281330 | Msa1126690 | 0.823129 | 1.635123e-53 | -8.615850e-47 |
| Msa0281330 | Msa1130680 | 0.805103 | 1.569082e-49 | -8.615850e-47 |
| Msa0281330 | Msa1131030 | 0.866135 | 3.557620e-65 | -8.615850e-47 |
| Msa0281330 | Msa1147670 | 0.855447 | 6.270346e-62 | -8.615850e-47 |
| Msa0281330 | Msa1156830 | 0.828768 | 7.482049e-55 | -8.615850e-47 |
| Msa0281330 | Msa1163320 | 0.805652 | 1.203820e-49 | -8.615850e-47 |
| Msa0281330 | Msa1164150 | 0.809401 | 1.926753e-50 | -8.615850e-47 |
| Msa0281330 | Msa1165640 | 0.852782 | 3.682460e-61 | -8.615850e-47 |
| Msa0281330 | Msa1166670 | 0.815226 | 1.030263e-51 | -8.615850e-47 |
| Msa0281330 | Msa1186030 | 0.862404 | 5.190003e-64 | -8.615850e-47 |
| Msa0281330 | Msa1206240 | 0.826891 | 2.114520e-54 | -8.615850e-47 |
| Msa0281330 | Msa1235950 | 0.833196 | 6.126552e-56 | -8.615850e-47 |
| Msa0281330 | Msa1235980 | 0.833879 | 4.138499e-56 | -8.615850e-47 |
| Msa0281330 | Msa1237040 | 0.829870 | 4.041872e-55 | -8.615850e-47 |
| Msa0281330 | Msa1240270 | 0.803554 | 3.298699e-49 | -8.615850e-47 |
| Msa0281330 | Msa1257450 | 0.811334 | 7.376008e-51 | -8.615850e-47 |
| Msa0281330 | Msa1311400 | 0.801491 | 8.782858e-49 | -8.615850e-47 |
| Msa0281330 | Msa1316100 | 0.801793 | 7.614402e-49 | -8.615850e-47 |
| Msa0281330 | Msa1330730 | 0.846428 | 2.185487e-59 | -8.615850e-47 |
| Msa0281330 | Msa1341780 | 0.857436 | 1.634694e-62 | -8.615850e-47 |
| Msa0281330 | Msa1347040 | 0.803191 | 3.921759e-49 | -8.615850e-47 |
| Msa0281330 | Msa1351020 | 0.869941 | 2.122596e-66 | -8.615850e-47 |
| Msa0281330 | Msa1351910 | 0.852344 | 4.910541e-61 | -8.615850e-47 |
| Msa0281330 | Msa1353300 | 0.820243 | 7.603823e-53 | -8.615850e-47 |
| Msa0281330 | Msa1367540 | 0.847856 | 8.871763e-60 | -8.615850e-47 |
| Msa0281330 | Msa1385480 | 0.802536 | 5.355035e-49 | -8.615850e-47 |
| Msa0281330 | Msa1390760 | 0.833762 | 4.427225e-56 | -8.615850e-47 |
| Msa0281330 | Msa1397660 | 0.853795 | 1.887149e-61 | -8.615850e-47 |
| Msa0281330 | Msa1424570 | 0.826598 | 2.484710e-54 | -8.615850e-47 |
| Msa0281330 | Msa1425070 | 0.863205 | 2.938571e-64 | -8.615850e-47 |
| Msa0281330 | Msa1441220 | -0.828014 | 1.137792e-54 | -8.615850e-47 |
| Msa0281330 | Msa1446410 | 0.845223 | 4.643883e-59 | -8.615850e-47 |
| Msa0281330 | Msa1450560 | 0.853222 | 2.756635e-61 | -8.615850e-47 |
| Msa0281330 | Msa1465700 | 0.833597 | 4.867984e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0281330 | MtrunA17_Chr2g0295971 | 100.000 | 81 | 0 | 0 | 1 | 81 | 1 | 81 | 3.94e-58 | 172 |
| Msa0281330 | MtrunA17_Chr7g0246911 | 93.827 | 81 | 5 | 0 | 1 | 81 | 26 | 106 | 2.70e-55 | 166 |
| Msa0281330 | MtrunA17_Chr4g0001451 | 68.627 | 51 | 14 | 2 | 6 | 54 | 18 | 68 | 4.35e-16 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0281330 | AT5G27700.1 | 85.185 | 81 | 12 | 0 | 1 | 81 | 1 | 81 | 9.41e-51 | 154 |
| Msa0281330 | AT3G53890.2 | 80.247 | 81 | 16 | 0 | 1 | 81 | 1 | 81 | 1.68e-48 | 148 |
| Msa0281330 | AT3G53890.1 | 80.247 | 81 | 16 | 0 | 1 | 81 | 1 | 81 | 1.68e-48 | 148 |
Find 30 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTCGTTCTGCATCTTT+AGG | 0.132539 | 2_3:-16726600 | None:intergenic |
| TTCTTCGTTCTGCATCTTTA+GGG | 0.265310 | 2_3:-16726599 | None:intergenic |
| TACCAAATGAATTTCAAAAT+AGG | 0.353340 | 2_3:-16728447 | None:intergenic |
| TCAGCTGAACATAGGTCATT+TGG | 0.363523 | 2_3:+16726795 | Msa0281330:CDS |
| CTGTTTGCATCTCTCTCATC+TGG | 0.389759 | 2_3:+16726425 | Msa0281330:five_prime_UTR |
| GTTTCAGTTCTGCTACAAAC+AGG | 0.431981 | 2_3:+16726743 | Msa0281330:intron |
| TGAAGCACTTAAGCAAACTT+AGG | 0.448126 | 2_3:-16728485 | None:intergenic |
| CTGTGGCTTCACCCGTGCTC+AGG | 0.453938 | 2_3:+16726861 | Msa0281330:CDS |
| AAAAGTTCATACCACTTCCT+AGG | 0.458041 | 2_3:-16726646 | None:intergenic |
| TCACCGAGCTCTACATTCCT+AGG | 0.480407 | 2_3:+16726629 | Msa0281330:CDS |
| GAAGCCACAGAGAGCAAAAG+TGG | 0.501571 | 2_3:-16726848 | None:intergenic |
| TGCAAACAGACGCAAAGCAG+AGG | 0.502010 | 2_3:-16726411 | None:intergenic |
| CTAAAGATGCAGAACGAAGA+AGG | 0.519629 | 2_3:+16726601 | Msa0281330:exon |
| ACAGTGGAATTGATCGCCTA+TGG | 0.527769 | 2_3:+16728293 | Msa0281330:CDS |
| AGCTCTACATTCCTAGGAAG+TGG | 0.545691 | 2_3:+16726635 | Msa0281330:CDS |
| TCAAAGGATGGATACGCAGA+AGG | 0.547072 | 2_3:-16728573 | None:intergenic |
| TTGTGTCTACTGCTTAAGCT+CGG | 0.551699 | 2_3:-16728329 | None:intergenic |
| ACGCAGAAGGGCAAAGCAGT+TGG | 0.555115 | 2_3:-16728560 | None:intergenic |
| AAACAGGCTTATTACTGCTA+AGG | 0.565079 | 2_3:+16726759 | Msa0281330:CDS |
| GCATCAGTTCAGCTGAACAT+AGG | 0.573016 | 2_3:+16726787 | Msa0281330:CDS |
| AAATAGGCATCGCATTACAT+AGG | 0.576390 | 2_3:-16728431 | None:intergenic |
| GCAAACAGACGCAAAGCAGA+GGG | 0.591865 | 2_3:-16726410 | None:intergenic |
| CAAAGGATGGATACGCAGAA+GGG | 0.593850 | 2_3:-16728572 | None:intergenic |
| GATGAGAGCGGTGTTTACAA+TGG | 0.604206 | 2_3:+16726817 | Msa0281330:CDS |
| ACAAATGGATACCTGAGCAC+GGG | 0.612936 | 2_3:-16726872 | None:intergenic |
| AACAGACGCAAAGCAGAGGG+AGG | 0.626207 | 2_3:-16726407 | None:intergenic |
| TTTCAGGGAGATGCTGACAG+TGG | 0.628229 | 2_3:+16728277 | Msa0281330:intron |
| CTTCCTAGGAATGTAGAGCT+CGG | 0.633169 | 2_3:-16726632 | None:intergenic |
| AACAAATGGATACCTGAGCA+CGG | 0.637714 | 2_3:-16726873 | None:intergenic |
| ATAGGTCATTTGGATGAGAG+CGG | 0.690184 | 2_3:+16726805 | Msa0281330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAGAAATTATGTTATAT+TGG | - | chr2_3:16727282-16727301 | None:intergenic | 10.0% |
| !!! | AAAATAAGTTTTTAATAAAC+AGG | - | chr2_3:16727647-16727666 | None:intergenic | 10.0% |
| !!! | TGTTTATTAAAAACTTATTT+TGG | + | chr2_3:16727646-16727665 | Msa0281330:intron | 10.0% |
| !!! | GTTTATTAAAAACTTATTTT+GGG | + | chr2_3:16727647-16727666 | Msa0281330:intron | 10.0% |
| !! | TTTAAGAAATTATGTTATAT+TGG | - | chr2_3:16727282-16727301 | None:intergenic | 10.0% |
| !!! | AAAATAAGTTTTTAATAAAC+AGG | - | chr2_3:16727647-16727666 | None:intergenic | 10.0% |
| !!! | TGTTTATTAAAAACTTATTT+TGG | + | chr2_3:16727646-16727665 | Msa0281330:intron | 10.0% |
| !!! | GTTTATTAAAAACTTATTTT+GGG | + | chr2_3:16727647-16727666 | Msa0281330:intron | 10.0% |
| !! | TGAATTAAGAGTAAATAATT+AGG | + | chr2_3:16726942-16726961 | Msa0281330:intron | 15.0% |
| !! | GAATTAAGAGTAAATAATTA+GGG | + | chr2_3:16726943-16726962 | Msa0281330:intron | 15.0% |
| !! | TTTCATAAGCTAAAAAAATA+AGG | + | chr2_3:16727327-16727346 | Msa0281330:intron | 15.0% |
| !! | TGATTCTATATATCTTATAT+TGG | + | chr2_3:16727552-16727571 | Msa0281330:intron | 15.0% |
| !! | TATACCAATATATCTTATAT+TGG | + | chr2_3:16727611-16727630 | Msa0281330:intron | 15.0% |
| !! | TATACCAATATAAGATATAT+TGG | - | chr2_3:16727618-16727637 | None:intergenic | 15.0% |
| !! | TGAATTAAGAGTAAATAATT+AGG | + | chr2_3:16726942-16726961 | Msa0281330:intron | 15.0% |
| !! | GAATTAAGAGTAAATAATTA+GGG | + | chr2_3:16726943-16726962 | Msa0281330:intron | 15.0% |
| !! | TTTCATAAGCTAAAAAAATA+AGG | + | chr2_3:16727327-16727346 | Msa0281330:intron | 15.0% |
| !! | TGATTCTATATATCTTATAT+TGG | + | chr2_3:16727552-16727571 | Msa0281330:intron | 15.0% |
| !! | TATACCAATATATCTTATAT+TGG | + | chr2_3:16727611-16727630 | Msa0281330:intron | 15.0% |
| !! | TATACCAATATAAGATATAT+TGG | - | chr2_3:16727618-16727637 | None:intergenic | 15.0% |
| !! | ACTTAAAATTTATACTTCCT+CGG | + | chr2_3:16727725-16727744 | Msa0281330:intron | 20.0% |
| !!! | TCCTTTTTATAAGAAACAAA+TGG | + | chr2_3:16727749-16727768 | Msa0281330:intron | 20.0% |
| !!! | ACCATTTGTTTCTTATAAAA+AGG | - | chr2_3:16727753-16727772 | None:intergenic | 20.0% |
| !! | TACTGATAATATGTAAACTT+AGG | - | chr2_3:16727891-16727910 | None:intergenic | 20.0% |
| !! | AAGTTTACATATTATCAGTA+TGG | + | chr2_3:16727891-16727910 | Msa0281330:intron | 20.0% |
| !! | TACCAAATGAATTTCAAAAT+AGG | - | chr2_3:16728450-16728469 | None:intergenic | 20.0% |
| !!! | AAATTCATTTGGTACTTTTA+AGG | + | chr2_3:16728456-16728475 | Msa0281330:three_prime_UTR | 20.0% |
| !! | CATCCTTTGATTAAAAAAAA+GGG | + | chr2_3:16728586-16728605 | Msa0281330:three_prime_UTR | 20.0% |
| !! | ACTTAAAATTTATACTTCCT+CGG | + | chr2_3:16727725-16727744 | Msa0281330:intron | 20.0% |
| !!! | TCCTTTTTATAAGAAACAAA+TGG | + | chr2_3:16727749-16727768 | Msa0281330:intron | 20.0% |
| !!! | ACCATTTGTTTCTTATAAAA+AGG | - | chr2_3:16727753-16727772 | None:intergenic | 20.0% |
| !! | TACTGATAATATGTAAACTT+AGG | - | chr2_3:16727891-16727910 | None:intergenic | 20.0% |
| !! | AAGTTTACATATTATCAGTA+TGG | + | chr2_3:16727891-16727910 | Msa0281330:intron | 20.0% |
| !! | TACCAAATGAATTTCAAAAT+AGG | - | chr2_3:16728450-16728469 | None:intergenic | 20.0% |
| !!! | AAATTCATTTGGTACTTTTA+AGG | + | chr2_3:16728456-16728475 | Msa0281330:three_prime_UTR | 20.0% |
| ! | TTGTTGAAAAATCAATCACT+TGG | - | chr2_3:16726578-16726597 | None:intergenic | 25.0% |
| !!! | TTTGAACTGTTTTTGTTTTG+TGG | + | chr2_3:16726716-16726735 | Msa0281330:intron | 25.0% |
| !!! | GGTTTCTATCTTTGTTATTT+TGG | + | chr2_3:16726909-16726928 | Msa0281330:intron | 25.0% |
| ! | AGCTAAAAAAATAAGGCAAA+CGG | + | chr2_3:16727334-16727353 | Msa0281330:intron | 25.0% |
| !! | ACGAGTAGTTTTTAATAAAC+AGG | - | chr2_3:16727584-16727603 | None:intergenic | 25.0% |
| ! | CTTAAAATTTATACTTCCTC+GGG | + | chr2_3:16727726-16727745 | Msa0281330:intron | 25.0% |
| ! | AACCAAATACATCAACTTTA+TGG | + | chr2_3:16727807-16727826 | Msa0281330:intron | 25.0% |
| ! | ATAATATGTAAACTTAGGCA+AGG | - | chr2_3:16727886-16727905 | None:intergenic | 25.0% |
| ! | GAAAACCTTTATATCTATGT+TGG | + | chr2_3:16728184-16728203 | Msa0281330:intron | 25.0% |
| ! | TATGTCCAACATAGATATAA+AGG | - | chr2_3:16728192-16728211 | None:intergenic | 25.0% |
| !!! | TTGATGCTTGTTTTATTTTC+AGG | + | chr2_3:16728261-16728280 | Msa0281330:intron | 25.0% |
| !!! | TGATGCTTGTTTTATTTTCA+GGG | + | chr2_3:16728262-16728281 | Msa0281330:intron | 25.0% |
| !! | TCAACTTTTGTTAGAGATAT+TGG | + | chr2_3:16728398-16728417 | Msa0281330:three_prime_UTR | 25.0% |
| !!! | TGCCTATTTTGAAATTCATT+TGG | + | chr2_3:16728445-16728464 | Msa0281330:three_prime_UTR | 25.0% |
| !! | TGTTTTCTATAACATTTCAG+AGG | + | chr2_3:16728522-16728541 | Msa0281330:three_prime_UTR | 25.0% |
| !!! | CCTTTTTTTTAATCAAAGGA+TGG | - | chr2_3:16728588-16728607 | None:intergenic | 25.0% |
| ! | CCATCCTTTGATTAAAAAAA+AGG | + | chr2_3:16728585-16728604 | Msa0281330:three_prime_UTR | 25.0% |
| ! | TTGTTGAAAAATCAATCACT+TGG | - | chr2_3:16726578-16726597 | None:intergenic | 25.0% |
| !!! | TTTGAACTGTTTTTGTTTTG+TGG | + | chr2_3:16726716-16726735 | Msa0281330:intron | 25.0% |
| !!! | GGTTTCTATCTTTGTTATTT+TGG | + | chr2_3:16726909-16726928 | Msa0281330:intron | 25.0% |
| ! | AGCTAAAAAAATAAGGCAAA+CGG | + | chr2_3:16727334-16727353 | Msa0281330:intron | 25.0% |
| !! | ACGAGTAGTTTTTAATAAAC+AGG | - | chr2_3:16727584-16727603 | None:intergenic | 25.0% |
| ! | CTTAAAATTTATACTTCCTC+GGG | + | chr2_3:16727726-16727745 | Msa0281330:intron | 25.0% |
| ! | AACCAAATACATCAACTTTA+TGG | + | chr2_3:16727807-16727826 | Msa0281330:intron | 25.0% |
| ! | ATAATATGTAAACTTAGGCA+AGG | - | chr2_3:16727886-16727905 | None:intergenic | 25.0% |
| ! | GAAAACCTTTATATCTATGT+TGG | + | chr2_3:16728184-16728203 | Msa0281330:intron | 25.0% |
| ! | TATGTCCAACATAGATATAA+AGG | - | chr2_3:16728192-16728211 | None:intergenic | 25.0% |
| !!! | TTGATGCTTGTTTTATTTTC+AGG | + | chr2_3:16728261-16728280 | Msa0281330:intron | 25.0% |
| !!! | TGATGCTTGTTTTATTTTCA+GGG | + | chr2_3:16728262-16728281 | Msa0281330:intron | 25.0% |
| !! | TCAACTTTTGTTAGAGATAT+TGG | + | chr2_3:16728398-16728417 | Msa0281330:three_prime_UTR | 25.0% |
| !!! | TGCCTATTTTGAAATTCATT+TGG | + | chr2_3:16728445-16728464 | Msa0281330:three_prime_UTR | 25.0% |
| !! | TGTTTTCTATAACATTTCAG+AGG | + | chr2_3:16728522-16728541 | Msa0281330:three_prime_UTR | 25.0% |
| !!! | CCTTTTTTTTAATCAAAGGA+TGG | - | chr2_3:16728588-16728607 | None:intergenic | 25.0% |
| CATTTGTTCCACTCTAATTT+CGG | + | chr2_3:16726888-16726907 | Msa0281330:intron | 30.0% | |
| GTATTATTCATAAGCTTGTC+AGG | + | chr2_3:16727227-16727246 | Msa0281330:intron | 30.0% | |
| AAAAGAGTGAAGACTCAATT+TGG | - | chr2_3:16727475-16727494 | None:intergenic | 30.0% | |
| TAAGAAACAAATGGTTCAAC+AGG | + | chr2_3:16727758-16727777 | Msa0281330:intron | 30.0% | |
| TCAACAGGAGTTAATGTATT+TGG | + | chr2_3:16727773-16727792 | Msa0281330:intron | 30.0% | |
| !! | GACCATAAAGTTGATGTATT+TGG | - | chr2_3:16727812-16727831 | None:intergenic | 30.0% |
| TCAAATTTCTCAGCTTACAT+TGG | - | chr2_3:16727951-16727970 | None:intergenic | 30.0% | |
| AGAAACACACTGAAATAAGT+AGG | + | chr2_3:16728152-16728171 | Msa0281330:intron | 30.0% | |
| GAAACACACTGAAATAAGTA+GGG | + | chr2_3:16728153-16728172 | Msa0281330:intron | 30.0% | |
| TATTAATTCATGTCATGCCT+TGG | + | chr2_3:16728219-16728238 | Msa0281330:intron | 30.0% | |
| CATTTGTTCCACTCTAATTT+CGG | + | chr2_3:16726888-16726907 | Msa0281330:intron | 30.0% | |
| GTATTATTCATAAGCTTGTC+AGG | + | chr2_3:16727227-16727246 | Msa0281330:intron | 30.0% | |
| AAAAGAGTGAAGACTCAATT+TGG | - | chr2_3:16727475-16727494 | None:intergenic | 30.0% | |
| TAAGAAACAAATGGTTCAAC+AGG | + | chr2_3:16727758-16727777 | Msa0281330:intron | 30.0% | |
| TCAACAGGAGTTAATGTATT+TGG | + | chr2_3:16727773-16727792 | Msa0281330:intron | 30.0% | |
| !! | GACCATAAAGTTGATGTATT+TGG | - | chr2_3:16727812-16727831 | None:intergenic | 30.0% |
| TCAAATTTCTCAGCTTACAT+TGG | - | chr2_3:16727951-16727970 | None:intergenic | 30.0% | |
| AGAAACACACTGAAATAAGT+AGG | + | chr2_3:16728152-16728171 | Msa0281330:intron | 30.0% | |
| GAAACACACTGAAATAAGTA+GGG | + | chr2_3:16728153-16728172 | Msa0281330:intron | 30.0% | |
| TATTAATTCATGTCATGCCT+TGG | + | chr2_3:16728219-16728238 | Msa0281330:intron | 30.0% | |
| TTCTTCGTTCTGCATCTTTA+GGG | - | chr2_3:16726602-16726621 | None:intergenic | 35.0% | |
| AAAAGTTCATACCACTTCCT+AGG | - | chr2_3:16726649-16726668 | None:intergenic | 35.0% | |
| AAACAGGCTTATTACTGCTA+AGG | + | chr2_3:16726759-16726778 | Msa0281330:CDS | 35.0% | |
| CGAAATTAGAGTGGAACAAA+TGG | - | chr2_3:16726890-16726909 | None:intergenic | 35.0% | |
| GATAGAAACCGAAATTAGAG+TGG | - | chr2_3:16726899-16726918 | None:intergenic | 35.0% | |
| AAAACCCAGAAATGTGTGTA+TGG | - | chr2_3:16727043-16727062 | None:intergenic | 35.0% | |
| ! | TTCGGGTTTAATTCTTTGTC+GGG | - | chr2_3:16727370-16727389 | None:intergenic | 35.0% |
| ! | GTTCGGGTTTAATTCTTTGT+CGG | - | chr2_3:16727371-16727390 | None:intergenic | 35.0% |
| ! | TAAACCCGAACTACTTGTTT+TGG | + | chr2_3:16727380-16727399 | Msa0281330:intron | 35.0% |
| AGAGACCAAAACAAGTAGTT+CGG | - | chr2_3:16727388-16727407 | None:intergenic | 35.0% | |
| AAGACAAGCAAAGAAACACA+AGG | - | chr2_3:16727679-16727698 | None:intergenic | 35.0% | |
| TTTCTTATAAAAAGGACCCG+AGG | - | chr2_3:16727745-16727764 | None:intergenic | 35.0% | |
| !!! | GTCTCTAGTGGAGTATTTTT+TGG | + | chr2_3:16728025-16728044 | Msa0281330:intron | 35.0% |
| !! | ACTCGTCAAAGTATTTTCCA+AGG | - | chr2_3:16728239-16728258 | None:intergenic | 35.0% |
| ! | AAATAGGCATCGCATTACAT+AGG | - | chr2_3:16728434-16728453 | None:intergenic | 35.0% |
| ! | TGAAGCACTTAAGCAAACTT+AGG | - | chr2_3:16728488-16728507 | None:intergenic | 35.0% |
| TTCTTCGTTCTGCATCTTTA+GGG | - | chr2_3:16726602-16726621 | None:intergenic | 35.0% | |
| AAAAGTTCATACCACTTCCT+AGG | - | chr2_3:16726649-16726668 | None:intergenic | 35.0% | |
| AAACAGGCTTATTACTGCTA+AGG | + | chr2_3:16726759-16726778 | Msa0281330:CDS | 35.0% | |
| CGAAATTAGAGTGGAACAAA+TGG | - | chr2_3:16726890-16726909 | None:intergenic | 35.0% | |
| GATAGAAACCGAAATTAGAG+TGG | - | chr2_3:16726899-16726918 | None:intergenic | 35.0% | |
| AAAACCCAGAAATGTGTGTA+TGG | - | chr2_3:16727043-16727062 | None:intergenic | 35.0% | |
| ! | TTCGGGTTTAATTCTTTGTC+GGG | - | chr2_3:16727370-16727389 | None:intergenic | 35.0% |
| ! | GTTCGGGTTTAATTCTTTGT+CGG | - | chr2_3:16727371-16727390 | None:intergenic | 35.0% |
| ! | TAAACCCGAACTACTTGTTT+TGG | + | chr2_3:16727380-16727399 | Msa0281330:intron | 35.0% |
| AGAGACCAAAACAAGTAGTT+CGG | - | chr2_3:16727388-16727407 | None:intergenic | 35.0% | |
| AAGACAAGCAAAGAAACACA+AGG | - | chr2_3:16727679-16727698 | None:intergenic | 35.0% | |
| TTTCTTATAAAAAGGACCCG+AGG | - | chr2_3:16727745-16727764 | None:intergenic | 35.0% | |
| !!! | GTCTCTAGTGGAGTATTTTT+TGG | + | chr2_3:16728025-16728044 | Msa0281330:intron | 35.0% |
| !! | ACTCGTCAAAGTATTTTCCA+AGG | - | chr2_3:16728239-16728258 | None:intergenic | 35.0% |
| ! | AAATAGGCATCGCATTACAT+AGG | - | chr2_3:16728434-16728453 | None:intergenic | 35.0% |
| ! | TGAAGCACTTAAGCAAACTT+AGG | - | chr2_3:16728488-16728507 | None:intergenic | 35.0% |
| CTTCTTCGTTCTGCATCTTT+AGG | - | chr2_3:16726603-16726622 | None:intergenic | 40.0% | |
| CTAAAGATGCAGAACGAAGA+AGG | + | chr2_3:16726601-16726620 | Msa0281330:exon | 40.0% | |
| GTTTCAGTTCTGCTACAAAC+AGG | + | chr2_3:16726743-16726762 | Msa0281330:intron | 40.0% | |
| TCAGCTGAACATAGGTCATT+TGG | + | chr2_3:16726795-16726814 | Msa0281330:CDS | 40.0% | |
| ATAGGTCATTTGGATGAGAG+CGG | + | chr2_3:16726805-16726824 | Msa0281330:CDS | 40.0% | |
| AACAAATGGATACCTGAGCA+CGG | - | chr2_3:16726876-16726895 | None:intergenic | 40.0% | |
| AAGCACCATACACACATTTC+TGG | + | chr2_3:16727035-16727054 | Msa0281330:intron | 40.0% | |
| AGCACCATACACACATTTCT+GGG | + | chr2_3:16727036-16727055 | Msa0281330:intron | 40.0% | |
| GAGACCAAAACAAGTAGTTC+GGG | - | chr2_3:16727387-16727406 | None:intergenic | 40.0% | |
| CGATGTCATTGTGTTATCTC+TGG | + | chr2_3:16727497-16727516 | Msa0281330:intron | 40.0% | |
| TACATCACTGATGTCTCTAG+TGG | + | chr2_3:16728013-16728032 | Msa0281330:intron | 40.0% | |
| CACTGAAATAAGTAGGGAAG+TGG | + | chr2_3:16728159-16728178 | Msa0281330:intron | 40.0% | |
| TTGTGTCTACTGCTTAAGCT+CGG | - | chr2_3:16728332-16728351 | None:intergenic | 40.0% | |
| CTTCTTCGTTCTGCATCTTT+AGG | - | chr2_3:16726603-16726622 | None:intergenic | 40.0% | |
| CTAAAGATGCAGAACGAAGA+AGG | + | chr2_3:16726601-16726620 | Msa0281330:exon | 40.0% | |
| GTTTCAGTTCTGCTACAAAC+AGG | + | chr2_3:16726743-16726762 | Msa0281330:intron | 40.0% | |
| TCAGCTGAACATAGGTCATT+TGG | + | chr2_3:16726795-16726814 | Msa0281330:CDS | 40.0% | |
| ATAGGTCATTTGGATGAGAG+CGG | + | chr2_3:16726805-16726824 | Msa0281330:CDS | 40.0% | |
| AACAAATGGATACCTGAGCA+CGG | - | chr2_3:16726876-16726895 | None:intergenic | 40.0% | |
| AAGCACCATACACACATTTC+TGG | + | chr2_3:16727035-16727054 | Msa0281330:intron | 40.0% | |
| AGCACCATACACACATTTCT+GGG | + | chr2_3:16727036-16727055 | Msa0281330:intron | 40.0% | |
| GAGACCAAAACAAGTAGTTC+GGG | - | chr2_3:16727387-16727406 | None:intergenic | 40.0% | |
| CGATGTCATTGTGTTATCTC+TGG | + | chr2_3:16727497-16727516 | Msa0281330:intron | 40.0% | |
| TACATCACTGATGTCTCTAG+TGG | + | chr2_3:16728013-16728032 | Msa0281330:intron | 40.0% | |
| CACTGAAATAAGTAGGGAAG+TGG | + | chr2_3:16728159-16728178 | Msa0281330:intron | 40.0% | |
| TTGTGTCTACTGCTTAAGCT+CGG | - | chr2_3:16728332-16728351 | None:intergenic | 40.0% | |
| CTGTTTGCATCTCTCTCATC+TGG | + | chr2_3:16726425-16726444 | Msa0281330:five_prime_UTR | 45.0% | |
| CTTCCTAGGAATGTAGAGCT+CGG | - | chr2_3:16726635-16726654 | None:intergenic | 45.0% | |
| AGCTCTACATTCCTAGGAAG+TGG | + | chr2_3:16726635-16726654 | Msa0281330:CDS | 45.0% | |
| GCATCAGTTCAGCTGAACAT+AGG | + | chr2_3:16726787-16726806 | Msa0281330:CDS | 45.0% | |
| GATGAGAGCGGTGTTTACAA+TGG | + | chr2_3:16726817-16726836 | Msa0281330:CDS | 45.0% | |
| !! | TTCTCCACTTTTGCTCTCTG+TGG | + | chr2_3:16726844-16726863 | Msa0281330:CDS | 45.0% |
| ACAAATGGATACCTGAGCAC+GGG | - | chr2_3:16726875-16726894 | None:intergenic | 45.0% | |
| AGAATAAGCCCATCCAAACC+AGG | - | chr2_3:16727158-16727177 | None:intergenic | 45.0% | |
| GCAGAGGACAAATTCGTCTA+TGG | - | chr2_3:16727424-16727443 | None:intergenic | 45.0% | |
| TCCTCTGCCAGGTCTAAATT+TGG | + | chr2_3:16727436-16727455 | Msa0281330:intron | 45.0% | |
| TCTAAATTTGGCCTCAGCGA+GGG | + | chr2_3:16727448-16727467 | Msa0281330:intron | 45.0% | |
| ACAGTGGAATTGATCGCCTA+TGG | + | chr2_3:16728293-16728312 | Msa0281330:CDS | 45.0% | |
| ! | CGGTTTTCTTCTTCTGCCAT+AGG | - | chr2_3:16728312-16728331 | None:intergenic | 45.0% |
| CAAAGGATGGATACGCAGAA+GGG | - | chr2_3:16728575-16728594 | None:intergenic | 45.0% | |
| TCAAAGGATGGATACGCAGA+AGG | - | chr2_3:16728576-16728595 | None:intergenic | 45.0% | |
| CTGTTTGCATCTCTCTCATC+TGG | + | chr2_3:16726425-16726444 | Msa0281330:five_prime_UTR | 45.0% | |
| CTTCCTAGGAATGTAGAGCT+CGG | - | chr2_3:16726635-16726654 | None:intergenic | 45.0% | |
| AGCTCTACATTCCTAGGAAG+TGG | + | chr2_3:16726635-16726654 | Msa0281330:CDS | 45.0% | |
| GCATCAGTTCAGCTGAACAT+AGG | + | chr2_3:16726787-16726806 | Msa0281330:CDS | 45.0% | |
| GATGAGAGCGGTGTTTACAA+TGG | + | chr2_3:16726817-16726836 | Msa0281330:CDS | 45.0% | |
| !! | TTCTCCACTTTTGCTCTCTG+TGG | + | chr2_3:16726844-16726863 | Msa0281330:CDS | 45.0% |
| ACAAATGGATACCTGAGCAC+GGG | - | chr2_3:16726875-16726894 | None:intergenic | 45.0% | |
| AGAATAAGCCCATCCAAACC+AGG | - | chr2_3:16727158-16727177 | None:intergenic | 45.0% | |
| GCAGAGGACAAATTCGTCTA+TGG | - | chr2_3:16727424-16727443 | None:intergenic | 45.0% | |
| TCCTCTGCCAGGTCTAAATT+TGG | + | chr2_3:16727436-16727455 | Msa0281330:intron | 45.0% | |
| TCTAAATTTGGCCTCAGCGA+GGG | + | chr2_3:16727448-16727467 | Msa0281330:intron | 45.0% | |
| ACAGTGGAATTGATCGCCTA+TGG | + | chr2_3:16728293-16728312 | Msa0281330:CDS | 45.0% | |
| ! | CGGTTTTCTTCTTCTGCCAT+AGG | - | chr2_3:16728312-16728331 | None:intergenic | 45.0% |
| CAAAGGATGGATACGCAGAA+GGG | - | chr2_3:16728575-16728594 | None:intergenic | 45.0% | |
| TCAAAGGATGGATACGCAGA+AGG | - | chr2_3:16728576-16728595 | None:intergenic | 45.0% | |
| !!! | TTTTTTTATTTTTTATCAAT+TGG | + | chr2_3:16728085-16728104 | Msa0281330:intron | 5.0% |
| !!! | TTTTTTTATTTTTTATCAAT+TGG | + | chr2_3:16728085-16728104 | Msa0281330:intron | 5.0% |
| GCAAACAGACGCAAAGCAGA+GGG | - | chr2_3:16726413-16726432 | None:intergenic | 50.0% | |
| TGCAAACAGACGCAAAGCAG+AGG | - | chr2_3:16726414-16726433 | None:intergenic | 50.0% | |
| TCACCGAGCTCTACATTCCT+AGG | + | chr2_3:16726629-16726648 | Msa0281330:CDS | 50.0% | |
| GAAGCCACAGAGAGCAAAAG+TGG | - | chr2_3:16726851-16726870 | None:intergenic | 50.0% | |
| ATCCAAACCAGGCCTAGACT+GGG | - | chr2_3:16727147-16727166 | None:intergenic | 50.0% | |
| !! | AGTCTAGGCCTGGTTTGGAT+GGG | + | chr2_3:16727147-16727166 | Msa0281330:intron | 50.0% |
| AGACGAATTTGTCCTCTGCC+AGG | + | chr2_3:16727425-16727444 | Msa0281330:intron | 50.0% | |
| GCCAAATTTAGACCTGGCAG+AGG | - | chr2_3:16727440-16727459 | None:intergenic | 50.0% | |
| GCTGAGGCCAAATTTAGACC+TGG | - | chr2_3:16727446-16727465 | None:intergenic | 50.0% | |
| GTCTAAATTTGGCCTCAGCG+AGG | + | chr2_3:16727447-16727466 | Msa0281330:intron | 50.0% | |
| TTTCAGGGAGATGCTGACAG+TGG | + | chr2_3:16728277-16728296 | Msa0281330:intron | 50.0% | |
| GCAAACAGACGCAAAGCAGA+GGG | - | chr2_3:16726413-16726432 | None:intergenic | 50.0% | |
| TGCAAACAGACGCAAAGCAG+AGG | - | chr2_3:16726414-16726433 | None:intergenic | 50.0% | |
| TCACCGAGCTCTACATTCCT+AGG | + | chr2_3:16726629-16726648 | Msa0281330:CDS | 50.0% | |
| GAAGCCACAGAGAGCAAAAG+TGG | - | chr2_3:16726851-16726870 | None:intergenic | 50.0% | |
| ATCCAAACCAGGCCTAGACT+GGG | - | chr2_3:16727147-16727166 | None:intergenic | 50.0% | |
| !! | AGTCTAGGCCTGGTTTGGAT+GGG | + | chr2_3:16727147-16727166 | Msa0281330:intron | 50.0% |
| AGACGAATTTGTCCTCTGCC+AGG | + | chr2_3:16727425-16727444 | Msa0281330:intron | 50.0% | |
| GCCAAATTTAGACCTGGCAG+AGG | - | chr2_3:16727440-16727459 | None:intergenic | 50.0% | |
| GCTGAGGCCAAATTTAGACC+TGG | - | chr2_3:16727446-16727465 | None:intergenic | 50.0% | |
| GTCTAAATTTGGCCTCAGCG+AGG | + | chr2_3:16727447-16727466 | Msa0281330:intron | 50.0% | |
| TTTCAGGGAGATGCTGACAG+TGG | + | chr2_3:16728277-16728296 | Msa0281330:intron | 50.0% | |
| AACAGACGCAAAGCAGAGGG+AGG | - | chr2_3:16726410-16726429 | None:intergenic | 55.0% | |
| AGTTTCCCTCTGCCCAGTCT+AGG | + | chr2_3:16727132-16727151 | Msa0281330:intron | 55.0% | |
| CATCCAAACCAGGCCTAGAC+TGG | - | chr2_3:16727148-16727167 | None:intergenic | 55.0% | |
| !! | CAGTCTAGGCCTGGTTTGGA+TGG | + | chr2_3:16727146-16727165 | Msa0281330:intron | 55.0% |
| CTCAATTTGGTCCCTCGCTG+AGG | - | chr2_3:16727462-16727481 | None:intergenic | 55.0% | |
| ACGCAGAAGGGCAAAGCAGT+TGG | - | chr2_3:16728563-16728582 | None:intergenic | 55.0% | |
| AACAGACGCAAAGCAGAGGG+AGG | - | chr2_3:16726410-16726429 | None:intergenic | 55.0% | |
| AGTTTCCCTCTGCCCAGTCT+AGG | + | chr2_3:16727132-16727151 | Msa0281330:intron | 55.0% | |
| CATCCAAACCAGGCCTAGAC+TGG | - | chr2_3:16727148-16727167 | None:intergenic | 55.0% | |
| !! | CAGTCTAGGCCTGGTTTGGA+TGG | + | chr2_3:16727146-16727165 | Msa0281330:intron | 55.0% |
| CTCAATTTGGTCCCTCGCTG+AGG | - | chr2_3:16727462-16727481 | None:intergenic | 55.0% | |
| ACGCAGAAGGGCAAAGCAGT+TGG | - | chr2_3:16728563-16728582 | None:intergenic | 55.0% | |
| TGCCCAGTCTAGGCCTGGTT+TGG | + | chr2_3:16727142-16727161 | Msa0281330:intron | 60.0% | |
| TGCCCAGTCTAGGCCTGGTT+TGG | + | chr2_3:16727142-16727161 | Msa0281330:intron | 60.0% | |
| CTGTGGCTTCACCCGTGCTC+AGG | + | chr2_3:16726861-16726880 | Msa0281330:CDS | 65.0% | |
| CCAGGCCTAGACTGGGCAGA+GGG | - | chr2_3:16727140-16727159 | None:intergenic | 65.0% | |
| ACCAGGCCTAGACTGGGCAG+AGG | - | chr2_3:16727141-16727160 | None:intergenic | 65.0% | |
| CTGTGGCTTCACCCGTGCTC+AGG | + | chr2_3:16726861-16726880 | Msa0281330:CDS | 65.0% | |
| CCAGGCCTAGACTGGGCAGA+GGG | - | chr2_3:16727140-16727159 | None:intergenic | 65.0% | |
| ACCAGGCCTAGACTGGGCAG+AGG | - | chr2_3:16727141-16727160 | None:intergenic | 65.0% | |
| CCCTCTGCCCAGTCTAGGCC+TGG | + | chr2_3:16727137-16727156 | Msa0281330:intron | 70.0% | |
| CCCTCTGCCCAGTCTAGGCC+TGG | + | chr2_3:16727137-16727156 | Msa0281330:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 16726406 | 16728607 | 16726406 | ID=Msa0281330;Name=Msa0281330 |
| chr2_3 | mRNA | 16726406 | 16728607 | 16726406 | ID=Msa0281330-mRNA-1;Parent=Msa0281330;Name=Msa0281330-mRNA-1;_AED=0.07;_eAED=0.07;_QI=83|1|1|1|0.66|0.5|4|262|81 |
| chr2_3 | exon | 16726406 | 16726446 | 16726406 | ID=Msa0281330-mRNA-1:exon:6856;Parent=Msa0281330-mRNA-1 |
| chr2_3 | exon | 16726565 | 16726656 | 16726565 | ID=Msa0281330-mRNA-1:exon:6857;Parent=Msa0281330-mRNA-1 |
| chr2_3 | exon | 16726750 | 16726882 | 16726750 | ID=Msa0281330-mRNA-1:exon:6858;Parent=Msa0281330-mRNA-1 |
| chr2_3 | exon | 16728283 | 16728607 | 16728283 | ID=Msa0281330-mRNA-1:exon:6859;Parent=Msa0281330-mRNA-1 |
| chr2_3 | five_prime_UTR | 16726406 | 16726446 | 16726406 | ID=Msa0281330-mRNA-1:five_prime_utr;Parent=Msa0281330-mRNA-1 |
| chr2_3 | five_prime_UTR | 16726565 | 16726606 | 16726565 | ID=Msa0281330-mRNA-1:five_prime_utr;Parent=Msa0281330-mRNA-1 |
| chr2_3 | CDS | 16726607 | 16726656 | 16726607 | ID=Msa0281330-mRNA-1:cds;Parent=Msa0281330-mRNA-1 |
| chr2_3 | CDS | 16726750 | 16726882 | 16726750 | ID=Msa0281330-mRNA-1:cds;Parent=Msa0281330-mRNA-1 |
| chr2_3 | CDS | 16728283 | 16728345 | 16728283 | ID=Msa0281330-mRNA-1:cds;Parent=Msa0281330-mRNA-1 |
| chr2_3 | three_prime_UTR | 16728346 | 16728607 | 16728346 | ID=Msa0281330-mRNA-1:three_prime_utr;Parent=Msa0281330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
