Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390760 | ACJ84110.1 | 99.145 | 234 | 2 | 0 | 1 | 234 | 1 | 234 | 5.65e-165 | 464 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390760 | sp|P34091|RL6_MESCR | 79.915 | 234 | 47 | 0 | 1 | 234 | 1 | 234 | 4.02e-129 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390760 | B7FH81 | 99.145 | 234 | 2 | 0 | 1 | 234 | 1 | 234 | 2.70e-165 | 464 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1390760 | 0.871681 | 5.676002e-67 | -8.615850e-47 |
| Msa0003030 | Msa1390760 | 0.831191 | 1.919642e-55 | -8.615850e-47 |
| Msa0003330 | Msa1390760 | 0.883444 | 4.465749e-71 | -8.615850e-47 |
| Msa0020870 | Msa1390760 | 0.805041 | 1.616428e-49 | -8.615850e-47 |
| Msa0027590 | Msa1390760 | 0.872860 | 2.297771e-67 | -8.615850e-47 |
| Msa0037230 | Msa1390760 | 0.817376 | 3.404916e-52 | -8.615850e-47 |
| Msa0040220 | Msa1390760 | 0.856190 | 3.803297e-62 | -8.615850e-47 |
| Msa0042510 | Msa1390760 | 0.901284 | 3.131194e-78 | -8.615850e-47 |
| Msa0071640 | Msa1390760 | 0.807078 | 6.026182e-50 | -8.615850e-47 |
| Msa0072570 | Msa1390760 | 0.849458 | 3.191593e-60 | -8.615850e-47 |
| Msa0075350 | Msa1390760 | 0.815126 | 1.084749e-51 | -8.615850e-47 |
| Msa0079560 | Msa1390760 | 0.896784 | 2.645807e-76 | -8.615850e-47 |
| Msa0086160 | Msa1390760 | 0.811788 | 5.875658e-51 | -8.615850e-47 |
| Msa0087910 | Msa1390760 | 0.858324 | 8.910188e-63 | -8.615850e-47 |
| Msa0094210 | Msa1390760 | 0.861820 | 7.841708e-64 | -8.615850e-47 |
| Msa0114600 | Msa1390760 | 0.810738 | 9.930048e-51 | -8.615850e-47 |
| Msa0116600 | Msa1390760 | 0.836772 | 7.693243e-57 | -8.615850e-47 |
| Msa0116690 | Msa1390760 | 0.829261 | 5.681912e-55 | -8.615850e-47 |
| Msa1351020 | Msa1390760 | 0.919275 | 5.516804e-87 | -8.615850e-47 |
| Msa1351910 | Msa1390760 | 0.831621 | 1.504975e-55 | -8.615850e-47 |
| Msa1358710 | Msa1390760 | 0.827894 | 1.215773e-54 | -8.615850e-47 |
| Msa1363910 | Msa1390760 | 0.866033 | 3.832264e-65 | -8.615850e-47 |
| Msa1363930 | Msa1390760 | 0.852690 | 3.911930e-61 | -8.615850e-47 |
| Msa1366540 | Msa1390760 | 0.813161 | 2.944710e-51 | -8.615850e-47 |
| Msa1367540 | Msa1390760 | 0.812288 | 4.571629e-51 | -8.615850e-47 |
| Msa1385480 | Msa1390760 | 0.893932 | 3.962669e-75 | -8.615850e-47 |
| Msa1387750 | Msa1390760 | 0.901439 | 2.677533e-78 | -8.615850e-47 |
| Msa1390760 | Msa1403520 | 0.835108 | 2.032750e-56 | -8.615850e-47 |
| Msa1390760 | Msa1407550 | 0.891659 | 3.245920e-74 | -8.615850e-47 |
| Msa1390760 | Msa1413570 | 0.917735 | 3.695832e-86 | -8.615850e-47 |
| Msa1390760 | Msa1423050 | 0.834608 | 2.716324e-56 | -8.615850e-47 |
| Msa1390760 | Msa1424570 | 0.870181 | 1.770897e-66 | -8.615850e-47 |
| Msa1390760 | Msa1432310 | 0.910518 | 1.712652e-82 | -8.615850e-47 |
| Msa1390760 | Msa1446410 | 0.856736 | 2.630448e-62 | -8.615850e-47 |
| Msa1390760 | Msa1446510 | 0.872131 | 4.024473e-67 | -8.615850e-47 |
| Msa1390760 | Msa1449160 | 0.837201 | 5.976000e-57 | -8.615850e-47 |
| Msa1390760 | Msa1450560 | 0.889702 | 1.912099e-73 | -8.615850e-47 |
| Msa1390760 | Msa1453530 | 0.846859 | 1.666812e-59 | -8.615850e-47 |
| Msa1390760 | Msa1463510 | 0.811292 | 7.531767e-51 | -8.615850e-47 |
| Msa1390760 | Msa1463570 | 0.887332 | 1.566749e-72 | -8.615850e-47 |
| Msa1390760 | Msa1465700 | 0.888444 | 5.874645e-73 | -8.615850e-47 |
| Msa1390760 | Msa1465890 | 0.830259 | 3.247563e-55 | -8.615850e-47 |
| Msa0602900 | Msa1390760 | 0.907687 | 3.871351e-81 | -8.615850e-47 |
| Msa0605600 | Msa1390760 | 0.809090 | 2.246969e-50 | -8.615850e-47 |
| Msa0605890 | Msa1390760 | 0.880208 | 6.632390e-70 | -8.615850e-47 |
| Msa0609120 | Msa1390760 | 0.839874 | 1.220440e-57 | -8.615850e-47 |
| Msa0619230 | Msa1390760 | 0.999215 | 1.868104e-296 | -8.615850e-47 |
| Msa0621190 | Msa1390760 | 0.905136 | 5.899631e-80 | -8.615850e-47 |
| Msa0629280 | Msa1390760 | 0.805213 | 1.488118e-49 | -8.615850e-47 |
| Msa0643960 | Msa1390760 | 0.906573 | 1.283679e-80 | -8.615850e-47 |
| Msa0649890 | Msa1390760 | 0.848228 | 7.006398e-60 | -8.615850e-47 |
| Msa0653060 | Msa1390760 | 0.824151 | 9.428740e-54 | -8.615850e-47 |
| Msa0656450 | Msa1390760 | 0.914001 | 3.198533e-84 | -8.615850e-47 |
| Msa0686550 | Msa1390760 | 0.863733 | 2.016197e-64 | -8.615850e-47 |
| Msa0691760 | Msa1390760 | 0.883352 | 4.826908e-71 | -8.615850e-47 |
| Msa0694400 | Msa1390760 | 0.910279 | 2.237976e-82 | -8.615850e-47 |
| Msa0700370 | Msa1390760 | 0.867595 | 1.219310e-65 | -8.615850e-47 |
| Msa0704860 | Msa1390760 | 0.912592 | 1.631670e-83 | -8.615850e-47 |
| Msa0705800 | Msa1390760 | 0.802176 | 6.352554e-49 | -8.615850e-47 |
| Msa0708630 | Msa1390760 | 0.886627 | 2.899933e-72 | -8.615850e-47 |
| Msa0741510 | Msa1390760 | 0.839274 | 1.747308e-57 | -8.615850e-47 |
| Msa0748350 | Msa1390760 | 0.809521 | 1.816113e-50 | -8.615850e-47 |
| Msa0758420 | Msa1390760 | 0.839423 | 1.598797e-57 | -8.615850e-47 |
| Msa0788380 | Msa1390760 | 0.853559 | 2.205610e-61 | -8.615850e-47 |
| Msa0790450 | Msa1390760 | 0.884340 | 2.084373e-71 | -8.615850e-47 |
| Msa0822580 | Msa1390760 | 0.800605 | 1.332386e-48 | -8.615850e-47 |
| Msa0834220 | Msa1390760 | 0.834449 | 2.977494e-56 | -8.615850e-47 |
| Msa0838070 | Msa1390760 | 0.833121 | 6.397778e-56 | -8.615850e-47 |
| Msa0123290 | Msa1390760 | 0.818735 | 1.678351e-52 | -8.615850e-47 |
| Msa0127230 | Msa1390760 | 0.886389 | 3.567737e-72 | -8.615850e-47 |
| Msa0128330 | Msa1390760 | 0.892260 | 1.870525e-74 | -8.615850e-47 |
| Msa0132460 | Msa1390760 | 0.886149 | 4.396894e-72 | -8.615850e-47 |
| Msa0134580 | Msa1390760 | 0.877053 | 8.552036e-69 | -8.615850e-47 |
| Msa0146910 | Msa1390760 | 0.828789 | 7.393347e-55 | -8.615850e-47 |
| Msa0167860 | Msa1390760 | 0.906265 | 1.784774e-80 | -8.615850e-47 |
| Msa0168320 | Msa1390760 | 0.881153 | 3.041673e-70 | -8.615850e-47 |
| Msa0174580 | Msa1390760 | 0.877509 | 5.936158e-69 | -8.615850e-47 |
| Msa0175000 | Msa1390760 | 0.801662 | 8.100571e-49 | -8.615850e-47 |
| Msa0182050 | Msa1390760 | 0.889324 | 2.682363e-73 | -8.615850e-47 |
| Msa0182100 | Msa1390760 | 0.885795 | 5.974360e-72 | -8.615850e-47 |
| Msa0183840 | Msa1390760 | 0.835730 | 1.415258e-56 | -8.615850e-47 |
| Msa0187810 | Msa1390760 | 0.801365 | 9.320466e-49 | -8.615850e-47 |
| Msa0188740 | Msa1390760 | 0.869450 | 3.069193e-66 | -8.615850e-47 |
| Msa0191450 | Msa1390760 | 0.873233 | 1.723027e-67 | -8.615850e-47 |
| Msa0191550 | Msa1390760 | 0.875406 | 3.160737e-68 | -8.615850e-47 |
| Msa0192300 | Msa1390760 | 0.897345 | 1.537968e-76 | -8.615850e-47 |
| Msa0194940 | Msa1390760 | 0.842041 | 3.293179e-58 | -8.615850e-47 |
| Msa0195030 | Msa1390760 | 0.844405 | 7.713988e-59 | -8.615850e-47 |
| Msa0216200 | Msa1390760 | 0.833128 | 6.370130e-56 | -8.615850e-47 |
| Msa0219090 | Msa1390760 | 0.835973 | 1.228066e-56 | -8.615850e-47 |
| Msa0233550 | Msa1390760 | 0.891349 | 4.307626e-74 | -8.615850e-47 |
| Msa0235050 | Msa1390760 | 0.808297 | 3.319445e-50 | -8.615850e-47 |
| Msa0237180 | Msa1390760 | 0.832596 | 8.640127e-56 | -8.615850e-47 |
| Msa1227350 | Msa1390760 | 0.854645 | 1.072406e-61 | -8.615850e-47 |
| Msa1235950 | Msa1390760 | 0.883450 | 4.442014e-71 | -8.615850e-47 |
| Msa1235980 | Msa1390760 | 0.891299 | 4.510104e-74 | -8.615850e-47 |
| Msa1237040 | Msa1390760 | 0.895354 | 1.038051e-75 | -8.615850e-47 |
| Msa1240270 | Msa1390760 | 0.817486 | 3.216843e-52 | -8.615850e-47 |
| Msa1245270 | Msa1390760 | 0.836313 | 1.006599e-56 | -8.615850e-47 |
| Msa1255830 | Msa1390760 | 0.807005 | 6.243062e-50 | -8.615850e-47 |
| Msa1255850 | Msa1390760 | 0.822571 | 2.206336e-53 | -8.615850e-47 |
| Msa1258540 | Msa1390760 | 0.848965 | 4.379126e-60 | -8.615850e-47 |
| Msa1270640 | Msa1390760 | 0.856264 | 3.617262e-62 | -8.615850e-47 |
| Msa1270710 | Msa1390760 | 0.856511 | 3.061521e-62 | -8.615850e-47 |
| Msa1278130 | Msa1390760 | 0.826237 | 3.029677e-54 | -8.615850e-47 |
| Msa1284060 | Msa1390760 | 0.828835 | 7.208924e-55 | -8.615850e-47 |
| Msa1284800 | Msa1390760 | 0.880018 | 7.753313e-70 | -8.615850e-47 |
| Msa1296090 | Msa1390760 | 0.845436 | 4.065893e-59 | -8.615850e-47 |
| Msa1316100 | Msa1390760 | 0.853232 | 2.738367e-61 | -8.615850e-47 |
| Msa1317390 | Msa1390760 | 0.905456 | 4.210104e-80 | -8.615850e-47 |
| Msa1333370 | Msa1390760 | 0.826175 | 3.133863e-54 | -8.615850e-47 |
| Msa1341780 | Msa1390760 | 0.812835 | 3.471796e-51 | -8.615850e-47 |
| Msa0369410 | Msa1390760 | 0.839526 | 1.503014e-57 | -8.615850e-47 |
| Msa0371490 | Msa1390760 | 0.894893 | 1.605589e-75 | -8.615850e-47 |
| Msa0373350 | Msa1390760 | 0.834108 | 3.626260e-56 | -8.615850e-47 |
| Msa0376850 | Msa1390760 | 0.887044 | 2.014995e-72 | -8.615850e-47 |
| Msa0377370 | Msa1390760 | 0.823679 | 1.216752e-53 | -8.615850e-47 |
| Msa0377520 | Msa1390760 | 0.872979 | 2.097244e-67 | -8.615850e-47 |
| Msa0380590 | Msa1390760 | 0.805443 | 1.331745e-49 | -8.615850e-47 |
| Msa0382670 | Msa1390760 | 0.879029 | 1.738610e-69 | -8.615850e-47 |
| Msa0387290 | Msa1390760 | 0.838068 | 3.581852e-57 | -8.615850e-47 |
| Msa0388520 | Msa1390760 | 0.871849 | 4.994298e-67 | -8.615850e-47 |
| Msa0416470 | Msa1390760 | 0.853272 | 2.666486e-61 | -8.615850e-47 |
| Msa0421920 | Msa1390760 | 0.805676 | 1.189976e-49 | -8.615850e-47 |
| Msa0426090 | Msa1390760 | 0.907818 | 3.358785e-81 | -8.615850e-47 |
| Msa0426250 | Msa1390760 | 0.895140 | 1.271253e-75 | -8.615850e-47 |
| Msa0430130 | Msa1390760 | 0.811949 | 5.419425e-51 | -8.615850e-47 |
| Msa0450150 | Msa1390760 | 0.816576 | 5.148917e-52 | -8.615850e-47 |
| Msa0472480 | Msa1390760 | 0.905192 | 5.565173e-80 | -8.615850e-47 |
| Msa0475810 | Msa1390760 | 0.827458 | 1.547110e-54 | -8.615850e-47 |
| Msa0481520 | Msa1390760 | 0.853924 | 1.731623e-61 | -8.615850e-47 |
| Msa0482560 | Msa1390760 | 0.834087 | 3.671324e-56 | -8.615850e-47 |
| Msa1025200 | Msa1390760 | 0.821621 | 3.663594e-53 | -8.615850e-47 |
| Msa1025220 | Msa1390760 | 0.834040 | 3.771093e-56 | -8.615850e-47 |
| Msa1040160 | Msa1390760 | 0.822515 | 2.273425e-53 | -8.615850e-47 |
| Msa1041680 | Msa1390760 | 0.832827 | 7.568282e-56 | -8.615850e-47 |
| Msa1041830 | Msa1390760 | 0.803035 | 4.224640e-49 | -8.615850e-47 |
| Msa1054280 | Msa1390760 | 0.850501 | 1.630052e-60 | -8.615850e-47 |
| Msa1076200 | Msa1390760 | 0.827108 | 1.876749e-54 | -8.615850e-47 |
| Msa1082050 | Msa1390760 | 0.861694 | 8.569057e-64 | -8.615850e-47 |
| Msa1083370 | Msa1390760 | 0.825259 | 5.167233e-54 | -8.615850e-47 |
| Msa1085850 | Msa1390760 | 0.810258 | 1.260632e-50 | -8.615850e-47 |
| Msa1093500 | Msa1390760 | 0.826763 | 2.269341e-54 | -8.615850e-47 |
| Msa0239420 | Msa1390760 | 0.896421 | 3.749565e-76 | -8.615850e-47 |
| Msa0256350 | Msa1390760 | 0.832565 | 8.790561e-56 | -8.615850e-47 |
| Msa0264640 | Msa1390760 | 0.819879 | 9.211804e-53 | -8.615850e-47 |
| Msa0270160 | Msa1390760 | 0.873796 | 1.113658e-67 | -8.615850e-47 |
| Msa0274940 | Msa1390760 | 0.849672 | 2.781482e-60 | -8.615850e-47 |
| Msa0277600 | Msa1390760 | 0.882078 | 1.407735e-70 | -8.615850e-47 |
| Msa0281330 | Msa1390760 | 0.833762 | 4.427225e-56 | -8.615850e-47 |
| Msa0281370 | Msa1390760 | 0.875273 | 3.507617e-68 | -8.615850e-47 |
| Msa0301250 | Msa1390760 | 0.901332 | 2.983469e-78 | -8.615850e-47 |
| Msa0313060 | Msa1390760 | 0.899910 | 1.240955e-77 | -8.615850e-47 |
| Msa0315430 | Msa1390760 | 0.896813 | 2.573007e-76 | -8.615850e-47 |
| Msa0315660 | Msa1390760 | 0.840499 | 8.383587e-58 | -8.615850e-47 |
| Msa0340560 | Msa1390760 | 0.819706 | 1.008923e-52 | -8.615850e-47 |
| Msa0346090 | Msa1390760 | 0.804410 | 2.189661e-49 | -8.615850e-47 |
| Msa1116940 | Msa1390760 | 0.823185 | 1.586929e-53 | -8.615850e-47 |
| Msa1124980 | Msa1390760 | 0.844937 | 5.547719e-59 | -8.615850e-47 |
| Msa1126690 | Msa1390760 | 0.888789 | 4.323801e-73 | -8.615850e-47 |
| Msa1144630 | Msa1390760 | 0.849680 | 2.768002e-60 | -8.615850e-47 |
| Msa1156830 | Msa1390760 | 0.821534 | 3.837241e-53 | -8.615850e-47 |
| Msa1163320 | Msa1390760 | 0.849159 | 3.867901e-60 | -8.615850e-47 |
| Msa1164150 | Msa1390760 | 0.811321 | 7.423529e-51 | -8.615850e-47 |
| Msa1165700 | Msa1390760 | 0.810369 | 1.193102e-50 | -8.615850e-47 |
| Msa1166570 | Msa1390760 | 0.831501 | 1.610660e-55 | -8.615850e-47 |
| Msa1167360 | Msa1390760 | 0.845853 | 3.134808e-59 | -8.615850e-47 |
| Msa1180000 | Msa1390760 | 0.877200 | 7.601337e-69 | -8.615850e-47 |
| Msa1186030 | Msa1390760 | 0.846376 | 2.257509e-59 | -8.615850e-47 |
| Msa1206240 | Msa1390760 | 0.820584 | 6.349461e-53 | -8.615850e-47 |
| Msa1213850 | Msa1390760 | 0.826696 | 2.354158e-54 | -8.615850e-47 |
| Msa1219760 | Msa1390760 | 0.832300 | 1.022960e-55 | -8.615850e-47 |
| Msa0485220 | Msa1390760 | 0.843039 | 1.790264e-58 | -8.615850e-47 |
| Msa0500420 | Msa1390760 | 0.804403 | 2.197218e-49 | -8.615850e-47 |
| Msa0511760 | Msa1390760 | 0.903415 | 3.553072e-79 | -8.615850e-47 |
| Msa0516830 | Msa1390760 | 0.887262 | 1.664894e-72 | -8.615850e-47 |
| Msa0517480 | Msa1390760 | 0.863185 | 2.981055e-64 | -8.615850e-47 |
| Msa0521730 | Msa1390760 | 0.809163 | 2.167043e-50 | -8.615850e-47 |
| Msa0540480 | Msa1390760 | 0.803434 | 3.492582e-49 | -8.615850e-47 |
| Msa0547920 | Msa1390760 | 0.913324 | 7.020535e-84 | -8.615850e-47 |
| Msa0552510 | Msa1390760 | 0.804578 | 2.020095e-49 | -8.615850e-47 |
| Msa0573550 | Msa1390760 | 0.915529 | 5.279786e-85 | -8.615850e-47 |
| Msa0574780 | Msa1390760 | 0.875933 | 2.083575e-68 | -8.615850e-47 |
| Msa0578010 | Msa1390760 | 0.908186 | 2.251690e-81 | -8.615850e-47 |
| Msa0579830 | Msa1390760 | 0.837682 | 4.499273e-57 | -8.615850e-47 |
| Msa0582070 | Msa1390760 | 0.843764 | 1.146162e-58 | -8.615850e-47 |
| Msa0597240 | Msa1390760 | 0.896679 | 2.925870e-76 | -8.615850e-47 |
| Msa0880050 | Msa1390760 | 0.835844 | 1.324696e-56 | -8.615850e-47 |
| Msa0902730 | Msa1390760 | 0.831802 | 1.357712e-55 | -8.615850e-47 |
| Msa0929680 | Msa1390760 | 0.854070 | 1.571980e-61 | -8.615850e-47 |
| Msa0929700 | Msa1390760 | 0.915200 | 7.810962e-85 | -8.615850e-47 |
| Msa0929790 | Msa1390760 | 0.818789 | 1.631496e-52 | -8.615850e-47 |
| Msa0930100 | Msa1390760 | 0.850398 | 1.742606e-60 | -8.615850e-47 |
| Msa0930360 | Msa1390760 | 0.888542 | 5.384334e-73 | -8.615850e-47 |
| Msa0930790 | Msa1390760 | 0.881069 | 3.258524e-70 | -8.615850e-47 |
| Msa0930890 | Msa1390760 | 0.842772 | 2.108393e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390760 | MtrunA17_Chr5g0448021 | 96.154 | 234 | 9 | 0 | 1 | 234 | 1 | 234 | 7.85e-163 | 449 |
| Msa1390760 | MtrunA17_Chr3g0129031 | 85.897 | 234 | 32 | 1 | 1 | 234 | 1 | 233 | 7.16e-145 | 404 |
| Msa1390760 | MtrunA17_Chr3g0129231 | 85.897 | 234 | 32 | 1 | 1 | 234 | 1 | 233 | 1.78e-144 | 402 |
| Msa1390760 | MtrunA17_Chr8g0383131 | 96.512 | 172 | 6 | 0 | 1 | 172 | 1 | 172 | 1.48e-120 | 341 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390760 | AT1G74050.1 | 81.466 | 232 | 43 | 0 | 3 | 234 | 2 | 233 | 2.08e-122 | 347 |
| Msa1390760 | AT1G74060.1 | 80.603 | 232 | 45 | 0 | 3 | 234 | 2 | 233 | 1.06e-120 | 343 |
| Msa1390760 | AT1G18540.1 | 78.879 | 232 | 49 | 0 | 3 | 234 | 2 | 233 | 7.81e-116 | 330 |
Find 83 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTGCCGGTAGATTTA+AGG | 0.142019 | tig0021384:+75096 | Msa1390760:CDS |
| GATGGAACTTGAAGTATTTC+AGG | 0.215273 | tig0021384:+76445 | Msa1390760:three_prime_UTR |
| GCACTTTCTTAACTGTAATA+TGG | 0.229052 | tig0021384:+76174 | Msa1390760:three_prime_UTR |
| CCAATTCCTCTGATCAAATC+AGG | 0.248411 | tig0021384:-74525 | None:intergenic |
| TCATCAGCAGGGTAAAATTT+TGG | 0.250055 | tig0021384:-74669 | None:intergenic |
| AGCATGCCAAAGGAAAATTT+TGG | 0.277279 | tig0021384:+76289 | Msa1390760:three_prime_UTR |
| TCTGGATTGCTTCTTGTAAC+TGG | 0.291952 | tig0021384:+75151 | Msa1390760:CDS |
| CACGAACTCGTCTTCTAGTT+TGG | 0.298877 | tig0021384:+76088 | Msa1390760:exon |
| CCTGATTTGATCAGAGGAAT+TGG | 0.319315 | tig0021384:+74525 | Msa1390760:CDS |
| TCAACAGCAGTTTCGGGCTT+AGG | 0.337911 | tig0021384:-74639 | None:intergenic |
| CAAGACACTGACTCGGATAA+AGG | 0.338529 | tig0021384:-76373 | None:intergenic |
| GCAGTTTCGGGCTTAGGTTT+AGG | 0.345228 | tig0021384:-74633 | None:intergenic |
| TCCTTTGAGACGTGTGAATC+AGG | 0.346287 | tig0021384:+75700 | Msa1390760:CDS |
| GAAAGGTATCTGGGCTATTA+AGG | 0.349673 | tig0021384:+74578 | Msa1390760:CDS |
| TGTATCACAAGAAAGGTATC+TGG | 0.350934 | tig0021384:+74568 | Msa1390760:CDS |
| CTCTGATCAAATCAGGGTTT+CGG | 0.358025 | tig0021384:-74518 | None:intergenic |
| CTTCTTGCCGGTAGATTTAA+GGG | 0.364740 | tig0021384:+75097 | Msa1390760:CDS |
| AAGACACTGACTCGGATAAA+GGG | 0.388739 | tig0021384:-76372 | None:intergenic |
| TTTGGAGACAGAAAGTAGAT+AGG | 0.389358 | tig0021384:+76307 | Msa1390760:three_prime_UTR |
| CCAGACTTGAAGACTTATCT+TGG | 0.410256 | tig0021384:+76031 | Msa1390760:CDS |
| CCAAGATAAGTCTTCAAGTC+TGG | 0.428069 | tig0021384:-76031 | None:intergenic |
| TTGAAAAGTACTTGTCATCA+AGG | 0.430348 | tig0021384:-75778 | None:intergenic |
| ACAGTGCTGATTCTTCTTGC+CGG | 0.435264 | tig0021384:+75085 | Msa1390760:CDS |
| AGCTTGCGGGTACACATAAT+AGG | 0.438949 | tig0021384:-76473 | None:intergenic |
| CGAATTCTTTGAGTCAGATA+AGG | 0.457015 | tig0021384:+75835 | Msa1390760:CDS |
| AATAAATCTATGTAATGTAA+TGG | 0.457278 | tig0021384:-74381 | None:intergenic |
| GGCTTCTTCACATCATCAGC+AGG | 0.465308 | tig0021384:-74681 | None:intergenic |
| TGAAGACTTATCTTGGTGCC+AGG | 0.466625 | tig0021384:+76038 | Msa1390760:CDS |
| AAGAAGAATCAGCACTGTGC+CGG | 0.476099 | tig0021384:-75080 | None:intergenic |
| AACACCGGAGATATCGACTT+TGG | 0.477360 | tig0021384:-75744 | None:intergenic |
| TCAGTTCCATCTCAATAAGC+TGG | 0.483444 | tig0021384:-76403 | None:intergenic |
| ACCTGCCTTGAGAGAAAACC+TGG | 0.493075 | tig0021384:-76056 | None:intergenic |
| ATCAGGGTTTCGGCTAACCC+TGG | 0.499591 | tig0021384:-74508 | None:intergenic |
| TGGTCATCTTTCTTCTGCTG+AGG | 0.501451 | tig0021384:-75965 | None:intergenic |
| TCTTCTAGTTTGGAGGAAAG+AGG | 0.510621 | tig0021384:+76098 | Msa1390760:exon |
| ACTGTAATATGGAATTCTGC+TGG | 0.512780 | tig0021384:+76185 | Msa1390760:three_prime_UTR |
| AGAAGAATCAGCACTGTGCC+GGG | 0.513749 | tig0021384:-75079 | None:intergenic |
| CAATTCCTCTGATCAAATCA+GGG | 0.517272 | tig0021384:-74524 | None:intergenic |
| AGGAACTCCGTTGATCTTGA+AGG | 0.517314 | tig0021384:-75681 | None:intergenic |
| TTTGCATTTCGTAGCAGCAA+TGG | 0.530175 | tig0021384:+74464 | Msa1390760:exon |
| CGATATCTCCGGTGTTAATG+TGG | 0.532682 | tig0021384:+75751 | Msa1390760:CDS |
| GTGAATCAGGCCTATGTGAT+TGG | 0.535696 | tig0021384:+75713 | Msa1390760:CDS |
| CTGGGTGCTCTCTGCTTCGT+CGG | 0.540977 | tig0021384:-74489 | None:intergenic |
| TCACAGATGTATCACAAGAA+AGG | 0.542107 | tig0021384:+74561 | Msa1390760:CDS |
| ACTGACTCGGATAAAGGGGC+AGG | 0.543645 | tig0021384:-76367 | None:intergenic |
| TTCAGGGCAAGCATCACTCC+CGG | 0.546234 | tig0021384:+75061 | Msa1390760:intron |
| CCTCTTGCCCTTAAATCTAC+CGG | 0.549567 | tig0021384:-75104 | None:intergenic |
| GTATCACAAGAAAGGTATCT+GGG | 0.554030 | tig0021384:+74569 | Msa1390760:CDS |
| GAACTCGTCTTCTAGTTTGG+AGG | 0.559347 | tig0021384:+76091 | Msa1390760:exon |
| TAATAACCAGCTTATTGAGA+TGG | 0.562966 | tig0021384:+76397 | Msa1390760:three_prime_UTR |
| CTTCTAGTTTGGAGGAAAGA+GGG | 0.566293 | tig0021384:+76099 | Msa1390760:exon |
| GGCTTATGCTTGTTGCGAAG+AGG | 0.566563 | tig0021384:-74702 | None:intergenic |
| AGCCTAAGCAGACTAAGCTC+AGG | 0.567914 | tig0021384:+74721 | Msa1390760:CDS |
| TCAGGGTTTCGGCTAACCCT+GGG | 0.568120 | tig0021384:-74507 | None:intergenic |
| TCTATGTAATGTAATGGACC+CGG | 0.568422 | tig0021384:-74375 | None:intergenic |
| CGAAACCCTGATTTGATCAG+AGG | 0.574541 | tig0021384:+74519 | Msa1390760:CDS |
| CGGTAGATTTAAGGGCAAGA+GGG | 0.577532 | tig0021384:+75105 | Msa1390760:CDS |
| GCCTGATTCACACGTCTCAA+AGG | 0.578175 | tig0021384:-75701 | None:intergenic |
| GAGTATATATCAGTATTTCA+CGG | 0.578413 | tig0021384:-77245 | None:intergenic |
| TCAACCAAAGTCGATATCTC+CGG | 0.580594 | tig0021384:+75740 | Msa1390760:CDS |
| CCGGTAGATTTAAGGGCAAG+AGG | 0.581183 | tig0021384:+75104 | Msa1390760:CDS |
| ACAATAGCAAAATTGCATGA+AGG | 0.581258 | tig0021384:-76215 | None:intergenic |
| AACCTGAGCTTAGTCTGCTT+AGG | 0.583716 | tig0021384:-74723 | None:intergenic |
| CTTTCACTTGAGCATGCCAA+AGG | 0.584843 | tig0021384:+76279 | Msa1390760:three_prime_UTR |
| GGAACTCCGTTGATCTTGAA+GGG | 0.585587 | tig0021384:-75680 | None:intergenic |
| GGTTGATGTACCAATCACAT+AGG | 0.591225 | tig0021384:-75723 | None:intergenic |
| GACGAAGCAGAGAGCACCCA+GGG | 0.611105 | tig0021384:+74491 | Msa1390760:CDS |
| AACTAGAAGACGAGTTCGTG+TGG | 0.615065 | tig0021384:-76085 | None:intergenic |
| AAGATTGTCTGTGTGTTGTG+TGG | 0.616133 | tig0021384:-74405 | None:intergenic |
| TCAGGTCCCTTCAAGATCAA+CGG | 0.616664 | tig0021384:+75674 | Msa1390760:intron |
| AGACACTGACTCGGATAAAG+GGG | 0.625328 | tig0021384:-76371 | None:intergenic |
| ATTCTTTGAGTCAGATAAGG+AGG | 0.630746 | tig0021384:+75838 | Msa1390760:CDS |
| TAGATTTAAGGGCAAGAGGG+TGG | 0.640763 | tig0021384:+75108 | Msa1390760:CDS |
| GTTACAAGAAGCAATCCAGA+AGG | 0.643198 | tig0021384:-75148 | None:intergenic |
| CGACGAAGCAGAGAGCACCC+AGG | 0.649766 | tig0021384:+74490 | Msa1390760:CDS |
| CTATGTAATGTAATGGACCC+GGG | 0.650162 | tig0021384:-74374 | None:intergenic |
| GCTTCTTCACATCATCAGCA+GGG | 0.669182 | tig0021384:-74680 | None:intergenic |
| TTATTATCAAGACACTGACT+CGG | 0.673999 | tig0021384:-76380 | None:intergenic |
| AAGGTTATCCACATTAACAC+CGG | 0.677708 | tig0021384:-75759 | None:intergenic |
| TTAGGTTTAGGATCATGACG+AGG | 0.681191 | tig0021384:-74621 | None:intergenic |
| TAGGTTTAGGATCATGACGA+GGG | 0.683516 | tig0021384:-74620 | None:intergenic |
| GAAAGATGACCAGAAAACAG+TGG | 0.686525 | tig0021384:+75976 | Msa1390760:CDS |
| CTGACTCGGATAAAGGGGCA+GGG | 0.687621 | tig0021384:-76366 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTGTTTTATAATTTTTTTAA+TGG | + | tig0021384:76133-76152 | Msa1390760:three_prime_UTR | 10.0% |
| !! | AATAAATCTATGTAATGTAA+TGG | - | tig0021384:74384-74403 | None:intergenic | 15.0% |
| !!! | TACATGATTTTGATATTATT+TGG | + | tig0021384:74932-74951 | Msa1390760:intron | 15.0% |
| !!! | ACATGATTTTGATATTATTT+GGG | + | tig0021384:74933-74952 | Msa1390760:intron | 15.0% |
| !!! | TATCATTTTTGTTAAGAAAA+AGG | - | tig0021384:76338-76357 | None:intergenic | 15.0% |
| !!! | CAGTTATTCTTATCATTTTA+CGG | + | tig0021384:74770-74789 | Msa1390760:intron | 20.0% |
| !! | AATATCAAAATCATGTACAA+AGG | - | tig0021384:74929-74948 | None:intergenic | 20.0% |
| !!! | TTTTGATATTATTTGGGATA+TGG | + | tig0021384:74939-74958 | Msa1390760:intron | 20.0% |
| !! | AAGATCAGAAATTTAATTGA+TGG | - | tig0021384:75247-75266 | None:intergenic | 20.0% |
| !!! | TCTTATTCTTTTTATGTACT+AGG | + | tig0021384:75263-75282 | Msa1390760:intron | 20.0% |
| !!! | TGTTTTTTATTTTTGATTGC+AGG | + | tig0021384:75928-75947 | Msa1390760:intron | 20.0% |
| !!! | TATGAATTTTAGTTATTGTG+AGG | + | tig0021384:76256-76275 | Msa1390760:three_prime_UTR | 20.0% |
| !! | GTAAATACAAATTAAAAACC+AGG | - | tig0021384:77021-77040 | None:intergenic | 20.0% |
| !!! | CAACCAGTATTTGTTATTTT+AGG | + | tig0021384:74898-74917 | Msa1390760:intron | 25.0% |
| ! | TCACCTAAAATAACAAATAC+TGG | - | tig0021384:74904-74923 | None:intergenic | 25.0% |
| !!! | TAATCACTTTTGTTTTGTGT+TGG | + | tig0021384:75026-75045 | Msa1390760:intron | 25.0% |
| !!! | AATCACTTTTGTTTTGTGTT+GGG | + | tig0021384:75027-75046 | Msa1390760:intron | 25.0% |
| ! | AAACCATTAGATACATCTAA+TGG | + | tig0021384:76544-76563 | Msa1390760:intron | 25.0% |
| !! | TTTTACTCTTCTTTCATTTC+TGG | + | tig0021384:76901-76920 | Msa1390760:intron | 25.0% |
| ! | AATACAAATTAAAAACCAGG+TGG | - | tig0021384:77018-77037 | None:intergenic | 25.0% |
| ! | CATCCATTAGATATATCTAA+TGG | + | tig0021384:77087-77106 | Msa1390760:intron | 25.0% |
| ! | GAACCATTAGATATATCTAA+TGG | - | tig0021384:77093-77112 | None:intergenic | 25.0% |
| !!! | ACTTTGATCATTTTTTCAAC+GGG | - | tig0021384:77178-77197 | None:intergenic | 25.0% |
| !!! | CACTTTGATCATTTTTTCAA+CGG | - | tig0021384:77179-77198 | None:intergenic | 25.0% |
| ACAGTGTTCTTTGTGTTAAT+TGG | + | tig0021384:74840-74859 | Msa1390760:intron | 30.0% | |
| CAGTGTTCTTTGTGTTAATT+GGG | + | tig0021384:74841-74860 | Msa1390760:intron | 30.0% | |
| TTTGTGTTAATTGGGATTAC+TGG | + | tig0021384:74849-74868 | Msa1390760:intron | 30.0% | |
| TTTGTTGCTCTTGATTGATA+AGG | + | tig0021384:75193-75212 | Msa1390760:intron | 30.0% | |
| AGAAATGTTGACGAGATATA+AGG | + | tig0021384:75297-75316 | Msa1390760:intron | 30.0% | |
| GAAATGTTGACGAGATATAA+GGG | + | tig0021384:75298-75317 | Msa1390760:intron | 30.0% | |
| !! | CATAAGTTTTGTCACTGTTT+GGG | - | tig0021384:75475-75494 | None:intergenic | 30.0% |
| !! | ACATAAGTTTTGTCACTGTT+TGG | - | tig0021384:75476-75495 | None:intergenic | 30.0% |
| TATTCAATGTTGACATCAGT+TGG | - | tig0021384:75570-75589 | None:intergenic | 30.0% | |
| GATGTCAACATTGAATATCA+TGG | + | tig0021384:75573-75592 | Msa1390760:intron | 30.0% | |
| ! | TTTTTCTTACTTTGCATCTC+AGG | + | tig0021384:75656-75675 | Msa1390760:intron | 30.0% |
| !! | TTGAAAAGTACTTGTCATCA+AGG | - | tig0021384:75781-75800 | None:intergenic | 30.0% |
| ! | TGATGACAAGTACTTTTCAA+AGG | + | tig0021384:75781-75800 | Msa1390760:CDS | 30.0% |
| !! | TTTTTGATTGCAGGAGAAAA+AGG | + | tig0021384:75937-75956 | Msa1390760:intron | 30.0% |
| GCACTTTCTTAACTGTAATA+TGG | + | tig0021384:76174-76193 | Msa1390760:three_prime_UTR | 30.0% | |
| ACAATAGCAAAATTGCATGA+AGG | - | tig0021384:76218-76237 | None:intergenic | 30.0% | |
| ! | TTATTATCAAGACACTGACT+CGG | - | tig0021384:76383-76402 | None:intergenic | 30.0% |
| TAATAACCAGCTTATTGAGA+TGG | + | tig0021384:76397-76416 | Msa1390760:three_prime_UTR | 30.0% | |
| GAAAAATTCTTAATGCGAGA+TGG | + | tig0021384:76427-76446 | Msa1390760:three_prime_UTR | 30.0% | |
| CATCCATTAGATGTATCTAA+TGG | - | tig0021384:76550-76569 | None:intergenic | 30.0% | |
| ! | AGATACATCTAATGGATGAT+AGG | + | tig0021384:76552-76571 | Msa1390760:intron | 30.0% |
| ! | ATCTAATGGATGATAGGAAA+AGG | + | tig0021384:76558-76577 | Msa1390760:intron | 30.0% |
| !!! | TAACCCATTTTTTATGCTTC+TGG | - | tig0021384:76940-76959 | None:intergenic | 30.0% |
| !! | TCTATGTAATGTAATGGACC+CGG | - | tig0021384:74378-74397 | None:intergenic | 35.0% |
| TTGCACAGACAGAAAAAACT+AGG | + | tig0021384:74440-74459 | Msa1390760:five_prime_UTR | 35.0% | |
| TGCACAGACAGAAAAAACTA+GGG | + | tig0021384:74441-74460 | Msa1390760:five_prime_UTR | 35.0% | |
| CAATTCCTCTGATCAAATCA+GGG | - | tig0021384:74527-74546 | None:intergenic | 35.0% | |
| TCACAGATGTATCACAAGAA+AGG | + | tig0021384:74561-74580 | Msa1390760:CDS | 35.0% | |
| !! | TGTATCACAAGAAAGGTATC+TGG | + | tig0021384:74568-74587 | Msa1390760:CDS | 35.0% |
| !! | GTATCACAAGAAAGGTATCT+GGG | + | tig0021384:74569-74588 | Msa1390760:CDS | 35.0% |
| !! | TGGTTTTTCAACAGCAGTTT+CGG | - | tig0021384:74649-74668 | None:intergenic | 35.0% |
| ! | TCATCAGCAGGGTAAAATTT+TGG | - | tig0021384:74672-74691 | None:intergenic | 35.0% |
| !!! | TTGGGTCTTTTTTGTCTTCA+GGG | + | tig0021384:75045-75064 | Msa1390760:intron | 35.0% |
| AAGGTTATCCACATTAACAC+CGG | - | tig0021384:75762-75781 | None:intergenic | 35.0% | |
| CGAATTCTTTGAGTCAGATA+AGG | + | tig0021384:75835-75854 | Msa1390760:CDS | 35.0% | |
| ATTCTTTGAGTCAGATAAGG+AGG | + | tig0021384:75838-75857 | Msa1390760:CDS | 35.0% | |
| ACTGTAATATGGAATTCTGC+TGG | + | tig0021384:76185-76204 | Msa1390760:three_prime_UTR | 35.0% | |
| ! | AGCATGCCAAAGGAAAATTT+TGG | + | tig0021384:76289-76308 | Msa1390760:three_prime_UTR | 35.0% |
| ! | CTGTCTCCAAAATTTTCCTT+TGG | - | tig0021384:76298-76317 | None:intergenic | 35.0% |
| TTTGGAGACAGAAAGTAGAT+AGG | + | tig0021384:76307-76326 | Msa1390760:three_prime_UTR | 35.0% | |
| ! | GATGGAACTTGAAGTATTTC+AGG | + | tig0021384:76445-76464 | Msa1390760:three_prime_UTR | 35.0% |
| ! | GGTTTGTTTAGTAGATTGAG+AGG | - | tig0021384:76529-76548 | None:intergenic | 35.0% |
| CTGGCTGCACATAATTAATT+TGG | - | tig0021384:76634-76653 | None:intergenic | 35.0% | |
| ! | TTAGTTTGGGTTTGATCCTT+TGG | + | tig0021384:76758-76777 | Msa1390760:intron | 35.0% |
| AGTAACTCAAAGGAATCCAA+AGG | - | tig0021384:76777-76796 | None:intergenic | 35.0% | |
| !! | TTTGAGTTACTGCTGATTCA+GGG | + | tig0021384:76786-76805 | Msa1390760:intron | 35.0% |
| AGAGTAAAATCCGAAACTGA+AGG | - | tig0021384:76890-76909 | None:intergenic | 35.0% | |
| !!! | CTTTTTAATTTGAAGCCACC+TGG | + | tig0021384:77000-77019 | Msa1390760:intron | 35.0% |
| !!! | ATTTTTTCAACGGGTACACA+TGG | - | tig0021384:77169-77188 | None:intergenic | 35.0% |
| !! | CTATGTAATGTAATGGACCC+GGG | - | tig0021384:74377-74396 | None:intergenic | 40.0% |
| AAGATTGTCTGTGTGTTGTG+TGG | - | tig0021384:74408-74427 | None:intergenic | 40.0% | |
| TTTGCATTTCGTAGCAGCAA+TGG | + | tig0021384:74464-74483 | Msa1390760:exon | 40.0% | |
| CTCTGATCAAATCAGGGTTT+CGG | - | tig0021384:74521-74540 | None:intergenic | 40.0% | |
| CCAATTCCTCTGATCAAATC+AGG | - | tig0021384:74528-74547 | None:intergenic | 40.0% | |
| ! | CCTGATTTGATCAGAGGAAT+TGG | + | tig0021384:74525-74544 | Msa1390760:CDS | 40.0% |
| !! | GAAAGGTATCTGGGCTATTA+AGG | + | tig0021384:74578-74597 | Msa1390760:CDS | 40.0% |
| TGGGCTATTAAGGCCAAAAA+TGG | + | tig0021384:74588-74607 | Msa1390760:CDS | 40.0% | |
| GCTATTAAGGCCAAAAATGG+TGG | + | tig0021384:74591-74610 | Msa1390760:CDS | 40.0% | |
| ! | TAGGTTTAGGATCATGACGA+GGG | - | tig0021384:74623-74642 | None:intergenic | 40.0% |
| ! | TTAGGTTTAGGATCATGACG+AGG | - | tig0021384:74624-74643 | None:intergenic | 40.0% |
| !! | GGTTTTTCAACAGCAGTTTC+GGG | - | tig0021384:74648-74667 | None:intergenic | 40.0% |
| ! | TCAGCAGGGTAAAATTTTGG+TGG | - | tig0021384:74669-74688 | None:intergenic | 40.0% |
| !!! | GTTGGGTCTTTTTTGTCTTC+AGG | + | tig0021384:75044-75063 | Msa1390760:intron | 40.0% |
| TCTTCTTGCCGGTAGATTTA+AGG | + | tig0021384:75096-75115 | Msa1390760:CDS | 40.0% | |
| CTTCTTGCCGGTAGATTTAA+GGG | + | tig0021384:75097-75116 | Msa1390760:CDS | 40.0% | |
| !!! | TTTTTGAAGCAGCTTCCTTC+TGG | + | tig0021384:75133-75152 | Msa1390760:CDS | 40.0% |
| GTTACAAGAAGCAATCCAGA+AGG | - | tig0021384:75151-75170 | None:intergenic | 40.0% | |
| TCTGGATTGCTTCTTGTAAC+TGG | + | tig0021384:75151-75170 | Msa1390760:CDS | 40.0% | |
| ! | GGTTGATGTACCAATCACAT+AGG | - | tig0021384:75726-75745 | None:intergenic | 40.0% |
| TCAACCAAAGTCGATATCTC+CGG | + | tig0021384:75740-75759 | Msa1390760:CDS | 40.0% | |
| !!! | TCCCTTGCTCTTCTTTTTTG+GGG | - | tig0021384:75810-75829 | None:intergenic | 40.0% |
| !!! | CTCCCTTGCTCTTCTTTTTT+GGG | - | tig0021384:75811-75830 | None:intergenic | 40.0% |
| !!! | TCTCCCTTGCTCTTCTTTTT+TGG | - | tig0021384:75812-75831 | None:intergenic | 40.0% |
| AAAAAGAAGAGCAAGGGAGA+AGG | + | tig0021384:75812-75831 | Msa1390760:CDS | 40.0% | |
| GTTATGCTCATTGCTTCTGT+TGG | + | tig0021384:75899-75918 | Msa1390760:intron | 40.0% | |
| GAAAGATGACCAGAAAACAG+TGG | + | tig0021384:75976-75995 | Msa1390760:CDS | 40.0% | |
| CCAAGATAAGTCTTCAAGTC+TGG | - | tig0021384:76034-76053 | None:intergenic | 40.0% | |
| CCAGACTTGAAGACTTATCT+TGG | + | tig0021384:76031-76050 | Msa1390760:CDS | 40.0% | |
| !! | TCTTCTAGTTTGGAGGAAAG+AGG | + | tig0021384:76098-76117 | Msa1390760:exon | 40.0% |
| !! | CTTCTAGTTTGGAGGAAAGA+GGG | + | tig0021384:76099-76118 | Msa1390760:exon | 40.0% |
| !! | AAGACACTGACTCGGATAAA+GGG | - | tig0021384:76375-76394 | None:intergenic | 40.0% |
| TCAGTTCCATCTCAATAAGC+TGG | - | tig0021384:76406-76425 | None:intergenic | 40.0% | |
| TAATTATGTGCAGCCAGCTA+CGG | + | tig0021384:76637-76656 | Msa1390760:intron | 40.0% | |
| ! | AGCAGACGATAGCATTTTGA+GGG | - | tig0021384:76709-76728 | None:intergenic | 40.0% |
| CTGATCGTCGTTCTTAGTTT+GGG | + | tig0021384:76745-76764 | Msa1390760:intron | 40.0% | |
| CTGAATCAGCAGTAACTCAA+AGG | - | tig0021384:76787-76806 | None:intergenic | 40.0% | |
| !! | CTTTGAGTTACTGCTGATTC+AGG | + | tig0021384:76785-76804 | Msa1390760:intron | 40.0% |
| !! | TTGAGTTACTGCTGATTCAG+GGG | + | tig0021384:76787-76806 | Msa1390760:intron | 40.0% |
| AGAAGGAGGATACAACAAAC+AGG | - | tig0021384:76836-76855 | None:intergenic | 40.0% | |
| ! | TTTGTTGTATCCTCCTTCTC+TGG | + | tig0021384:76837-76856 | Msa1390760:intron | 40.0% |
| ! | TCCGCCAGAAGCATAAAAAA+TGG | + | tig0021384:76933-76952 | Msa1390760:intron | 40.0% |
| !!! | CCCATTTTTTATGCTTCTGG+CGG | - | tig0021384:76937-76956 | None:intergenic | 40.0% |
| ! | CCGCCAGAAGCATAAAAAAT+GGG | + | tig0021384:76934-76953 | Msa1390760:intron | 40.0% |
| ATGCTTCTCTTTCTCTCAAG+TGG | - | tig0021384:76979-76998 | None:intergenic | 40.0% | |
| GGTTCGAACAATAGATTGAG+AGG | + | tig0021384:77108-77127 | Msa1390760:intron | 40.0% | |
| TGCAGAGAATTAAGATGGAG+AGG | + | tig0021384:77135-77154 | Msa1390760:intron | 40.0% | |
| GAATTAAGATGGAGAGGATC+CGG | + | tig0021384:77141-77160 | Msa1390760:intron | 40.0% | |
| ! | CGAAACCCTGATTTGATCAG+AGG | + | tig0021384:74519-74538 | Msa1390760:CDS | 45.0% |
| ! | AGGGAAAACGCCACCATTTT+TGG | - | tig0021384:74604-74623 | None:intergenic | 45.0% |
| GCTTCTTCACATCATCAGCA+GGG | - | tig0021384:74683-74702 | None:intergenic | 45.0% | |
| AACCTGAGCTTAGTCTGCTT+AGG | - | tig0021384:74726-74745 | None:intergenic | 45.0% | |
| AAGAAGAATCAGCACTGTGC+CGG | - | tig0021384:75083-75102 | None:intergenic | 45.0% | |
| !! | ACAGTGCTGATTCTTCTTGC+CGG | + | tig0021384:75085-75104 | Msa1390760:CDS | 45.0% |
| CCTCTTGCCCTTAAATCTAC+CGG | - | tig0021384:75107-75126 | None:intergenic | 45.0% | |
| CGGTAGATTTAAGGGCAAGA+GGG | + | tig0021384:75105-75124 | Msa1390760:CDS | 45.0% | |
| TAGATTTAAGGGCAAGAGGG+TGG | + | tig0021384:75108-75127 | Msa1390760:CDS | 45.0% | |
| TTAACAGGCACCACTTGTCT+TGG | + | tig0021384:75616-75635 | Msa1390760:intron | 45.0% | |
| TGAAGAGAAGCCAAGACAAG+TGG | - | tig0021384:75629-75648 | None:intergenic | 45.0% | |
| TCAGGTCCCTTCAAGATCAA+CGG | + | tig0021384:75674-75693 | Msa1390760:intron | 45.0% | |
| GGAACTCCGTTGATCTTGAA+GGG | - | tig0021384:75683-75702 | None:intergenic | 45.0% | |
| AGGAACTCCGTTGATCTTGA+AGG | - | tig0021384:75684-75703 | None:intergenic | 45.0% | |
| !! | TCCTTTGAGACGTGTGAATC+AGG | + | tig0021384:75700-75719 | Msa1390760:CDS | 45.0% |
| GTGAATCAGGCCTATGTGAT+TGG | + | tig0021384:75713-75732 | Msa1390760:CDS | 45.0% | |
| !! | AACACCGGAGATATCGACTT+TGG | - | tig0021384:75747-75766 | None:intergenic | 45.0% |
| ! | CGATATCTCCGGTGTTAATG+TGG | + | tig0021384:75751-75770 | Msa1390760:CDS | 45.0% |
| AGCCCCAAAAAAGAAGAGCA+AGG | + | tig0021384:75805-75824 | Msa1390760:CDS | 45.0% | |
| GCCCCAAAAAAGAAGAGCAA+GGG | + | tig0021384:75806-75825 | Msa1390760:CDS | 45.0% | |
| TGGTCATCTTTCTTCTGCTG+AGG | - | tig0021384:75968-75987 | None:intergenic | 45.0% | |
| !! | TGAAGACTTATCTTGGTGCC+AGG | + | tig0021384:76038-76057 | Msa1390760:CDS | 45.0% |
| AACTAGAAGACGAGTTCGTG+TGG | - | tig0021384:76088-76107 | None:intergenic | 45.0% | |
| ! | CACGAACTCGTCTTCTAGTT+TGG | + | tig0021384:76088-76107 | Msa1390760:exon | 45.0% |
| !! | GAACTCGTCTTCTAGTTTGG+AGG | + | tig0021384:76091-76110 | Msa1390760:exon | 45.0% |
| CTTTCACTTGAGCATGCCAA+AGG | + | tig0021384:76279-76298 | Msa1390760:three_prime_UTR | 45.0% | |
| !! | AGACACTGACTCGGATAAAG+GGG | - | tig0021384:76374-76393 | None:intergenic | 45.0% |
| !! | CAAGACACTGACTCGGATAA+AGG | - | tig0021384:76376-76395 | None:intergenic | 45.0% |
| AGCTTGCGGGTACACATAAT+AGG | - | tig0021384:76476-76495 | None:intergenic | 45.0% | |
| TGCAGAGAAATAGGATGGAG+AGG | - | tig0021384:76502-76521 | None:intergenic | 45.0% | |
| TGAGGGAGGCAGAGTATAAA+CGG | - | tig0021384:76692-76711 | None:intergenic | 45.0% | |
| !! | AGACGATAGCATTTTGAGGG+AGG | - | tig0021384:76706-76725 | None:intergenic | 45.0% |
| ! | GAGCAGACGATAGCATTTTG+AGG | - | tig0021384:76710-76729 | None:intergenic | 45.0% |
| CGATCAGGTGAAAAGGAGAA+AGG | - | tig0021384:76732-76751 | None:intergenic | 45.0% | |
| AGAACGACGATCAGGTGAAA+AGG | - | tig0021384:76739-76758 | None:intergenic | 45.0% | |
| CCAAACTAAGAACGACGATC+AGG | - | tig0021384:76747-76766 | None:intergenic | 45.0% | |
| CCTGATCGTCGTTCTTAGTT+TGG | + | tig0021384:76744-76763 | Msa1390760:intron | 45.0% | |
| !! | TGAGTTACTGCTGATTCAGG+GGG | + | tig0021384:76788-76807 | Msa1390760:intron | 45.0% |
| ACAACTGAAACCAGAGAAGG+AGG | - | tig0021384:76850-76869 | None:intergenic | 45.0% | |
| GCAACAACTGAAACCAGAGA+AGG | - | tig0021384:76853-76872 | None:intergenic | 45.0% | |
| CCGAAACTGAAGGTTCTTAC+CGG | - | tig0021384:76880-76899 | None:intergenic | 45.0% | |
| CCGGTAAGAACCTTCAGTTT+CGG | + | tig0021384:76877-76896 | Msa1390760:intron | 45.0% | |
| GCTGCTGCAGAGAATTAAGA+TGG | + | tig0021384:77130-77149 | Msa1390760:intron | 45.0% | |
| !! | GTTAAAAAAAAAAAAAAAAA+AGG | - | tig0021384:75601-75620 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTAAC+AGG | + | tig0021384:75601-75620 | Msa1390760:intron | 5.0% |
| GCAGTTTCGGGCTTAGGTTT+AGG | - | tig0021384:74636-74655 | None:intergenic | 50.0% | |
| TCAACAGCAGTTTCGGGCTT+AGG | - | tig0021384:74642-74661 | None:intergenic | 50.0% | |
| GGCTTCTTCACATCATCAGC+AGG | - | tig0021384:74684-74703 | None:intergenic | 50.0% | |
| ! | GGCTTATGCTTGTTGCGAAG+AGG | - | tig0021384:74705-74724 | None:intergenic | 50.0% |
| AGCCTAAGCAGACTAAGCTC+AGG | + | tig0021384:74721-74740 | Msa1390760:CDS | 50.0% | |
| AGAAGAATCAGCACTGTGCC+GGG | - | tig0021384:75082-75101 | None:intergenic | 50.0% | |
| CCGGTAGATTTAAGGGCAAG+AGG | + | tig0021384:75104-75123 | Msa1390760:CDS | 50.0% | |
| GCCTGATTCACACGTCTCAA+AGG | - | tig0021384:75704-75723 | None:intergenic | 50.0% | |
| ! | ATGCAGCGTCCACTGTTTTC+TGG | - | tig0021384:75988-76007 | None:intergenic | 50.0% |
| !! | TGGTGCCAGGTTTTCTCTCA+AGG | + | tig0021384:76051-76070 | Msa1390760:CDS | 50.0% |
| ACCTGCCTTGAGAGAAAACC+TGG | - | tig0021384:76059-76078 | None:intergenic | 50.0% | |
| GCTGCTGCAGAGAAATAGGA+TGG | - | tig0021384:76507-76526 | None:intergenic | 50.0% | |
| AGAGGCTGCTGCAGAGAAAT+AGG | - | tig0021384:76511-76530 | None:intergenic | 50.0% | |
| TTGACTTCTGCAGCCAGCTA+CGG | + | tig0021384:76660-76679 | Msa1390760:intron | 50.0% | |
| GGTTTCAGTTGTTGCAGTGC+CGG | + | tig0021384:76858-76877 | Msa1390760:intron | 50.0% | |
| TCAACGGGTACACATGGATC+CGG | - | tig0021384:77163-77182 | None:intergenic | 50.0% | |
| TCAGGGTTTCGGCTAACCCT+GGG | - | tig0021384:74510-74529 | None:intergenic | 55.0% | |
| ATCAGGGTTTCGGCTAACCC+TGG | - | tig0021384:74511-74530 | None:intergenic | 55.0% | |
| TTCAGGGCAAGCATCACTCC+CGG | + | tig0021384:75061-75080 | Msa1390760:intron | 55.0% | |
| ! | GCCAGGTTTTCTCTCAAGGC+AGG | + | tig0021384:76055-76074 | Msa1390760:CDS | 55.0% |
| !! | CTGACTCGGATAAAGGGGCA+GGG | - | tig0021384:76369-76388 | None:intergenic | 55.0% |
| !! | ACTGACTCGGATAAAGGGGC+AGG | - | tig0021384:76370-76389 | None:intergenic | 55.0% |
| GATGGAGAGGATCAGCTTGC+GGG | - | tig0021384:76489-76508 | None:intergenic | 55.0% | |
| GGATGGAGAGGATCAGCTTG+CGG | - | tig0021384:76490-76509 | None:intergenic | 55.0% | |
| CTGCAGAAGTCAACCGTAGC+TGG | - | tig0021384:76653-76672 | None:intergenic | 55.0% | |
| GGGAGGCAGAGTATAAACGG+CGG | - | tig0021384:76689-76708 | None:intergenic | 55.0% | |
| !! | ACTGCTGATTCAGGGGGTGT+TGG | + | tig0021384:76794-76813 | Msa1390760:intron | 55.0% |
| CTGGGTGCTCTCTGCTTCGT+CGG | - | tig0021384:74492-74511 | None:intergenic | 60.0% | |
| !! | GACGAAGCAGAGAGCACCCA+GGG | + | tig0021384:74491-74510 | Msa1390760:CDS | 60.0% |
| ACTTCTGCAGCCAGCTACGG+CGG | + | tig0021384:76663-76682 | Msa1390760:intron | 60.0% | |
| !! | CGACGAAGCAGAGAGCACCC+AGG | + | tig0021384:74490-74509 | Msa1390760:CDS | 65.0% |
| TAAACGGCGGCCGCCGTAGC+TGG | - | tig0021384:76676-76695 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021384 | gene | 74374 | 77264 | 74374 | ID=Msa1390760;Name=Msa1390760 |
| tig0021384 | mRNA | 74374 | 77264 | 74374 | ID=Msa1390760-mRNA-1;Parent=Msa1390760;Name=Msa1390760-mRNA-1;_AED=0.05;_eAED=0.05;_QI=109|1|1|1|0.75|0.6|5|470|234 |
| tig0021384 | exon | 74374 | 74742 | 74374 | ID=Msa1390760-mRNA-1:exon:12373;Parent=Msa1390760-mRNA-1 |
| tig0021384 | exon | 75066 | 75172 | 75066 | ID=Msa1390760-mRNA-1:exon:12374;Parent=Msa1390760-mRNA-1 |
| tig0021384 | exon | 75678 | 75859 | 75678 | ID=Msa1390760-mRNA-1:exon:12375;Parent=Msa1390760-mRNA-1 |
| tig0021384 | exon | 75950 | 76480 | 75950 | ID=Msa1390760-mRNA-1:exon:12376;Parent=Msa1390760-mRNA-1 |
| tig0021384 | exon | 77170 | 77264 | 77170 | ID=Msa1390760-mRNA-1:exon:12377;Parent=Msa1390760-mRNA-1 |
| tig0021384 | five_prime_UTR | 74374 | 74482 | 74374 | ID=Msa1390760-mRNA-1:five_prime_utr;Parent=Msa1390760-mRNA-1 |
| tig0021384 | CDS | 74483 | 74742 | 74483 | ID=Msa1390760-mRNA-1:cds;Parent=Msa1390760-mRNA-1 |
| tig0021384 | CDS | 75066 | 75172 | 75066 | ID=Msa1390760-mRNA-1:cds;Parent=Msa1390760-mRNA-1 |
| tig0021384 | CDS | 75678 | 75859 | 75678 | ID=Msa1390760-mRNA-1:cds;Parent=Msa1390760-mRNA-1 |
| tig0021384 | CDS | 75950 | 76105 | 75950 | ID=Msa1390760-mRNA-1:cds;Parent=Msa1390760-mRNA-1 |
| tig0021384 | three_prime_UTR | 76106 | 76480 | 76106 | ID=Msa1390760-mRNA-1:three_prime_utr;Parent=Msa1390760-mRNA-1 |
| tig0021384 | three_prime_UTR | 77170 | 77264 | 77170 | ID=Msa1390760-mRNA-1:three_prime_utr;Parent=Msa1390760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
