Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1175300 | sp|Q9BQ70|TCF25_HUMAN | 29.958 | 474 | 303 | 10 | 160 | 625 | 177 | 629 | 2.19e-65 | 230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1175300 | G7ZZI1 | 97.335 | 638 | 16 | 1 | 1 | 637 | 1 | 638 | 0.0 | 1296 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026150 | Msa1175300 | 0.801845 | 7.430742e-49 | -8.615850e-47 |
| Msa0610090 | Msa1175300 | 0.810450 | 1.145821e-50 | -8.615850e-47 |
| Msa0633570 | Msa1175300 | 0.806476 | 8.076904e-50 | -8.615850e-47 |
| Msa0656810 | Msa1175300 | 0.819738 | 9.921593e-53 | -8.615850e-47 |
| Msa0658480 | Msa1175300 | 0.819807 | 9.567672e-53 | -8.615850e-47 |
| Msa0707390 | Msa1175300 | 0.810785 | 9.696134e-51 | -8.615850e-47 |
| Msa0821680 | Msa1175300 | 0.806763 | 7.023074e-50 | -8.615850e-47 |
| Msa0822180 | Msa1175300 | 0.800455 | 1.429478e-48 | -8.615850e-47 |
| Msa0825270 | Msa1175300 | 0.805221 | 1.482057e-49 | -8.615850e-47 |
| Msa0826510 | Msa1175300 | 0.812976 | 3.233311e-51 | -8.615850e-47 |
| Msa0166750 | Msa1175300 | 0.802576 | 5.253543e-49 | -8.615850e-47 |
| Msa0167480 | Msa1175300 | 0.812219 | 4.733575e-51 | -8.615850e-47 |
| Msa0384880 | Msa1175300 | 0.829209 | 5.851125e-55 | -8.615850e-47 |
| Msa0436200 | Msa1175300 | 0.810639 | 1.042779e-50 | -8.615850e-47 |
| Msa0474700 | Msa1175300 | 0.809477 | 1.856125e-50 | -8.615850e-47 |
| Msa0981430 | Msa1175300 | 0.809865 | 1.531923e-50 | -8.615850e-47 |
| Msa1083880 | Msa1175300 | 0.807758 | 4.322612e-50 | -8.615850e-47 |
| Msa0248460 | Msa1175300 | 0.809696 | 1.665451e-50 | -8.615850e-47 |
| Msa0262480 | Msa1175300 | 0.801724 | 7.867805e-49 | -8.615850e-47 |
| Msa0291520 | Msa1175300 | 0.811144 | 8.106981e-51 | -8.615850e-47 |
| Msa0300350 | Msa1175300 | 0.817409 | 3.347600e-52 | -8.615850e-47 |
| Msa0311060 | Msa1175300 | 0.805586 | 1.243069e-49 | -8.615850e-47 |
| Msa1140430 | Msa1175300 | 0.803814 | 2.912650e-49 | -8.615850e-47 |
| Msa1166870 | Msa1175300 | 0.811486 | 6.836529e-51 | -8.615850e-47 |
| Msa1173900 | Msa1175300 | 0.803444 | 3.475782e-49 | -8.615850e-47 |
| Msa1175300 | Msa1179980 | 0.801107 | 1.052187e-48 | -8.615850e-47 |
| Msa1175300 | Msa1201830 | 0.813075 | 3.075337e-51 | -8.615850e-47 |
| Msa1175300 | Msa1205850 | 0.810115 | 1.352911e-50 | -8.615850e-47 |
| Msa1175300 | Msa1227690 | 0.821250 | 4.460896e-53 | -8.615850e-47 |
| Msa1175300 | Msa1235530 | 0.867713 | 1.117261e-65 | -8.615850e-47 |
| Msa1175300 | Msa1256770 | 0.800574 | 1.352185e-48 | -8.615850e-47 |
| Msa1175300 | Msa1271580 | 0.843154 | 1.668727e-58 | -8.615850e-47 |
| Msa1175300 | Msa1294840 | 0.817685 | 2.900999e-52 | -8.615850e-47 |
| Msa1175300 | Msa1397940 | 0.803887 | 2.813236e-49 | -8.615850e-47 |
| Msa1175300 | Msa1432480 | 0.805131 | 1.548272e-49 | -8.615850e-47 |
| Msa0484290 | Msa1175300 | 0.804502 | 2.094751e-49 | -8.615850e-47 |
| Msa0593700 | Msa1175300 | 0.812301 | 4.542779e-51 | -8.615850e-47 |
| Msa0865620 | Msa1175300 | 0.804301 | 2.307420e-49 | -8.615850e-47 |
| Msa0943170 | Msa1175300 | 0.823276 | 1.511632e-53 | -8.615850e-47 |
| Msa0963020 | Msa1175300 | 0.824144 | 9.462795e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1175300 | MtrunA17_Chr8g0345581 | 97.335 | 638 | 16 | 1 | 1 | 637 | 1 | 638 | 0.0 | 1296 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1175300 | AT2G46900.1 | 52.960 | 642 | 279 | 8 | 1 | 636 | 1 | 625 | 0.0 | 590 |
Find 139 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAAATCTTCAACAGTTTA+TGG | 0.173934 | 8_1:+6622495 | Msa1175300:CDS |
| TGCCTTGCTGGTTAACAAAT+TGG | 0.209445 | 8_1:-6622555 | None:intergenic |
| AATGAGCTGATAAGAATATT+TGG | 0.245244 | 8_1:+6619637 | Msa1175300:CDS |
| TTTAGGATCCACTTGTAATA+TGG | 0.250493 | 8_1:-6619599 | None:intergenic |
| AGACATGATCTTAGAAGATT+TGG | 0.254569 | 8_1:+6619477 | Msa1175300:CDS |
| TAATGCTGTTTCCGGTAAAA+AGG | 0.258321 | 8_1:+6619438 | Msa1175300:CDS |
| GAACGGTCTTCTTAAGATTA+TGG | 0.266888 | 8_1:-6619744 | None:intergenic |
| AGCAAGGATAATGCTGTTTC+CGG | 0.285860 | 8_1:+6619430 | Msa1175300:CDS |
| TAGAAATTCATAATGGAAAA+AGG | 0.289003 | 8_1:-6622925 | None:intergenic |
| TGTTTGATCTGATCGGAAAA+AGG | 0.294076 | 8_1:-6621945 | None:intergenic |
| TCGAGAGAAATTATCTTATA+TGG | 0.295069 | 8_1:+6622005 | Msa1175300:CDS |
| AATATTCTGCCATTGTTAGA+AGG | 0.301694 | 8_1:-6621367 | None:intergenic |
| AAAGCAATTAATGACATAAA+TGG | 0.304083 | 8_1:+6621302 | Msa1175300:CDS |
| TCATGTATAGAGCGACGTTT+AGG | 0.313744 | 8_1:+6622792 | Msa1175300:three_prime_UTR |
| ACAATCAACCAAGCAGTTCT+AGG | 0.318006 | 8_1:+6619695 | Msa1175300:CDS |
| CTTCAAACGATTTCTGATAC+TGG | 0.327831 | 8_1:-6621274 | None:intergenic |
| GAGCATGGCCATTGCCTTGC+TGG | 0.333728 | 8_1:-6622567 | None:intergenic |
| AAATCTGACACCATAGTATA+TGG | 0.334760 | 8_1:-6622876 | None:intergenic |
| GTCGGTGAGAGACGATAATA+AGG | 0.337030 | 8_1:+6619324 | Msa1175300:CDS |
| ATAAAAGTGATAACTCTATA+TGG | 0.338321 | 8_1:+6621717 | Msa1175300:CDS |
| GATAAGAATATTTGGATCTA+AGG | 0.341346 | 8_1:+6619645 | Msa1175300:CDS |
| AAGGGCAGGGGAGGCTATGC+TGG | 0.351572 | 8_1:+6622525 | Msa1175300:CDS |
| GGACAAAAGTAGAGCTGTTA+AGG | 0.355106 | 8_1:+6619564 | Msa1175300:CDS |
| AGAACGGATATCACTACTTT+AGG | 0.361170 | 8_1:+6619833 | Msa1175300:CDS |
| GAAAATCTTCAACAGTTTAT+GGG | 0.364509 | 8_1:+6622496 | Msa1175300:CDS |
| TATCGTGTTTGTACTTCAAT+TGG | 0.364526 | 8_1:-6621496 | None:intergenic |
| GCAATTATATTGAACCTAGA+TGG | 0.377413 | 8_1:-6622854 | None:intergenic |
| ATTTATGTCATTAATTGCTT+TGG | 0.378083 | 8_1:-6621300 | None:intergenic |
| TTGATCCTTGTGAACCATCT+AGG | 0.379306 | 8_1:+6622840 | Msa1175300:three_prime_UTR |
| CTGTCACAGATCTGCTTTAG+AGG | 0.390454 | 8_1:+6621577 | Msa1175300:CDS |
| CATGTATAGAGCGACGTTTA+GGG | 0.394315 | 8_1:+6622793 | Msa1175300:three_prime_UTR |
| CATGGGAGCCAAGTGTTTGC+TGG | 0.397571 | 8_1:-6619775 | None:intergenic |
| ATAAGATCATTTGACCTCTC+AGG | 0.398329 | 8_1:-6623026 | None:intergenic |
| AATATAATTGCCATATACTA+TGG | 0.404133 | 8_1:+6622866 | Msa1175300:three_prime_UTR |
| GTGAAAAGAGCTGTGAATAA+AGG | 0.408438 | 8_1:-6621527 | None:intergenic |
| TGGGATTGCCGTTACTGAAT+CGG | 0.425461 | 8_1:-6622470 | None:intergenic |
| AGCAAGATAATCAGTGATAC+TGG | 0.425823 | 8_1:+6622698 | Msa1175300:exon |
| TCACATTAAGAATTTAGTTA+TGG | 0.428705 | 8_1:+6622994 | Msa1175300:three_prime_UTR |
| AGAATCAACACAAGCATCTT+CGG | 0.432094 | 8_1:-6621801 | None:intergenic |
| GGCAGAATATTTCAAGGTAG+TGG | 0.433494 | 8_1:+6621379 | Msa1175300:CDS |
| CATGACTAACAGCGCTGAAA+AGG | 0.437683 | 8_1:-6622966 | None:intergenic |
| TGTCAGGTATGGACATTTGT+TGG | 0.449537 | 8_1:+6622435 | Msa1175300:intron |
| TCGAAGGGGTTGATTGTTGA+AGG | 0.470411 | 8_1:-6618255 | None:intergenic |
| TGTGACAGCCTCGTCGATCC+AGG | 0.472006 | 8_1:-6621562 | None:intergenic |
| ATAAAAGTAGAAATTCATAA+TGG | 0.474042 | 8_1:-6622932 | None:intergenic |
| GTGGGTGAACAACAGATGTC+TGG | 0.477922 | 8_1:+6621398 | Msa1175300:CDS |
| AACAATGGCAGAATATTTCA+AGG | 0.483635 | 8_1:+6621373 | Msa1175300:CDS |
| GTCTGAGGAGTATGCATGGC+TGG | 0.487613 | 8_1:+6621676 | Msa1175300:CDS |
| CAAAACGATGTCGGGTCGAT+TGG | 0.487749 | 8_1:+6618131 | Msa1175300:exon |
| CTTTATTTCAAGAAATTCCA+TGG | 0.488823 | 8_1:-6619812 | None:intergenic |
| TTTATGGGCATTCCAAGGGC+AGG | 0.493998 | 8_1:+6622511 | Msa1175300:CDS |
| GAAACTCGCAAAACGATGTC+GGG | 0.496514 | 8_1:+6618123 | Msa1175300:exon |
| AACAGTTTATGGGCATTCCA+AGG | 0.499072 | 8_1:+6622506 | Msa1175300:CDS |
| CTTCGGAGGCTGCGCGCTCA+AGG | 0.501239 | 8_1:-6621784 | None:intergenic |
| GCTACCGTGGGTTACTTATG+AGG | 0.505040 | 8_1:+6622639 | Msa1175300:CDS |
| AGAAGGGAATCTATGTGATA+AGG | 0.508005 | 8_1:-6621350 | None:intergenic |
| TGAAACTCGCAAAACGATGT+CGG | 0.514967 | 8_1:+6618122 | Msa1175300:exon |
| CGCATCTGCCTAGAACTGCT+TGG | 0.516026 | 8_1:-6619703 | None:intergenic |
| TAAGATCATTTGACCTCTCA+GGG | 0.518070 | 8_1:-6623025 | None:intergenic |
| TCCCACATTCACGCCACTGC+AGG | 0.518120 | 8_1:+6621466 | Msa1175300:CDS |
| ACTAGCTTCTTTATAACTGA+AGG | 0.523607 | 8_1:-6621872 | None:intergenic |
| CTCAAGGTAAAACCGACAAA+TGG | 0.528352 | 8_1:-6621768 | None:intergenic |
| ATGTGATGATTCTTTGTCCA+TGG | 0.531302 | 8_1:+6619795 | Msa1175300:CDS |
| GGGCATTCCAAGGGCAGGGG+AGG | 0.532957 | 8_1:+6622516 | Msa1175300:CDS |
| TTCAAACGATTTCTGATACT+GGG | 0.533774 | 8_1:-6621273 | None:intergenic |
| GCATTGACTACTTTGCTCTA+CGG | 0.535756 | 8_1:+6621654 | Msa1175300:CDS |
| GATGATAATGAACAAGAAGA+AGG | 0.536101 | 8_1:+6618222 | Msa1175300:CDS |
| TCACCAGGTTGGTTAACATC+AGG | 0.536619 | 8_1:-6622670 | None:intergenic |
| ACTAGATTCTGATGATCCCA+TGG | 0.539097 | 8_1:+6621619 | Msa1175300:CDS |
| CTTGCTCGCCGTCACCAGGT+TGG | 0.539532 | 8_1:-6622681 | None:intergenic |
| ATATTCTGCCATTGTTAGAA+GGG | 0.544386 | 8_1:-6621366 | None:intergenic |
| GTCCATGCACGATCTTTCAA+TGG | 0.544801 | 8_1:-6621905 | None:intergenic |
| TTGTCACTCCAGCAAACACT+TGG | 0.547319 | 8_1:+6619767 | Msa1175300:CDS |
| CCCTGCAGTGGCGTGAATGT+GGG | 0.547959 | 8_1:-6621467 | None:intergenic |
| TATGGGCATTCCAAGGGCAG+GGG | 0.549439 | 8_1:+6622513 | Msa1175300:CDS |
| TGCTGTCTCCATATTACAAG+TGG | 0.550086 | 8_1:+6619591 | Msa1175300:CDS |
| GCAGTTCTAGGCAGATGCGA+GGG | 0.550442 | 8_1:+6619707 | Msa1175300:CDS |
| CTACTTTGCTCTACGGTCTG+AGG | 0.553939 | 8_1:+6621661 | Msa1175300:CDS |
| CTAGATTCTGATGATCCCAT+GGG | 0.560564 | 8_1:+6621620 | Msa1175300:CDS |
| TTATGGGCATTCCAAGGGCA+GGG | 0.560838 | 8_1:+6622512 | Msa1175300:CDS |
| TTTGTTAACCAGCAAGGCAA+TGG | 0.563599 | 8_1:+6622559 | Msa1175300:CDS |
| GCAGAATATTTCAAGGTAGT+GGG | 0.565131 | 8_1:+6621380 | Msa1175300:CDS |
| GAATAAGAAGAAGAAAAGCA+AGG | 0.566423 | 8_1:+6619414 | Msa1175300:CDS |
| GAATTCCTGTTTGATCTGAT+CGG | 0.570429 | 8_1:-6621952 | None:intergenic |
| TACCATTGAAAGATCGTGCA+TGG | 0.570738 | 8_1:+6621903 | Msa1175300:CDS |
| CAAAAGTAGAGCTGTTAAGG+AGG | 0.574585 | 8_1:+6619567 | Msa1175300:CDS |
| CGATTTCTGATACTGGGAGT+AGG | 0.577462 | 8_1:-6621267 | None:intergenic |
| ATAAAAGTGAAGTTAACGAT+TGG | 0.579495 | 8_1:+6622095 | Msa1175300:CDS |
| TGGTGCTGCAAAACAAGTCA+TGG | 0.582471 | 8_1:+6622057 | Msa1175300:CDS |
| GAATTTCTTGAAATAAAGAA+CGG | 0.583327 | 8_1:+6619817 | Msa1175300:CDS |
| TGATTTCTCCGATTCAGTAA+CGG | 0.585040 | 8_1:+6622462 | Msa1175300:CDS |
| TGATTCTGAACCCGAAAACC+AGG | 0.585818 | 8_1:+6618293 | Msa1175300:CDS |
| ACAGTTTATGGGCATTCCAA+GGG | 0.585828 | 8_1:+6622507 | Msa1175300:CDS |
| ACCCTGCAGTGGCGTGAATG+TGG | 0.585995 | 8_1:-6621468 | None:intergenic |
| TTGTCATTGAGAAGATCGAA+GGG | 0.590886 | 8_1:-6618270 | None:intergenic |
| AACCAATTTGTTAACCAGCA+AGG | 0.592699 | 8_1:+6622553 | Msa1175300:CDS |
| TTGCAACACCACGAGGAGCA+TGG | 0.593616 | 8_1:-6622582 | None:intergenic |
| ATTTGAGTCGATGCTACCGT+GGG | 0.594754 | 8_1:+6622627 | Msa1175300:CDS |
| TTAATCAAGTGATCTTGAGA+TGG | 0.599577 | 8_1:-6621974 | None:intergenic |
| TACGGTCTGAGGAGTATGCA+TGG | 0.601028 | 8_1:+6621672 | Msa1175300:CDS |
| GATGTTAACCAACCTGGTGA+CGG | 0.603495 | 8_1:+6622673 | Msa1175300:CDS |
| CCGTGGGTTACTTATGAGGA+AGG | 0.604107 | 8_1:+6622643 | Msa1175300:CDS |
| CATAGATTCCCTTCTAACAA+TGG | 0.604190 | 8_1:+6621358 | Msa1175300:CDS |
| TTCTGATACTGGGAGTAGGA+TGG | 0.610529 | 8_1:-6621263 | None:intergenic |
| GAGCAACATGTTTCTACTGA+AGG | 0.612830 | 8_1:+6619523 | Msa1175300:CDS |
| AGGAAAAGCAGTGAATGCTA+AGG | 0.612882 | 8_1:+6619543 | Msa1175300:CDS |
| GGTAAAACCGACAAATGGCA+AGG | 0.613446 | 8_1:-6621763 | None:intergenic |
| ACATGAAAGACATCTCATCA+TGG | 0.615441 | 8_1:-6622775 | None:intergenic |
| ATTGTCATTGAGAAGATCGA+AGG | 0.619025 | 8_1:-6618271 | None:intergenic |
| AGAGAAATTATCTTATATGG+AGG | 0.619706 | 8_1:+6622008 | Msa1175300:CDS |
| AATTGGCAATTACCCTGCAG+TGG | 0.620670 | 8_1:-6621479 | None:intergenic |
| AGCAGTTCTAGGCAGATGCG+AGG | 0.622161 | 8_1:+6619706 | Msa1175300:CDS |
| GGCAATGGCCATGCTCCTCG+TGG | 0.629627 | 8_1:+6622574 | Msa1175300:CDS |
| GTTGATTGTTGAAGGTGCAG+TGG | 0.633548 | 8_1:-6618247 | None:intergenic |
| GTTTGCTGGAGTGACAAGAA+CGG | 0.641607 | 8_1:-6619761 | None:intergenic |
| TATTTGAGTCGATGCTACCG+TGG | 0.643054 | 8_1:+6622626 | Msa1175300:CDS |
| CCCACATTCACGCCACTGCA+GGG | 0.646230 | 8_1:+6621467 | Msa1175300:CDS |
| GTAAAACCGACAAATGGCAA+GGG | 0.648123 | 8_1:-6621762 | None:intergenic |
| GGACCTGATGTTAACCAACC+TGG | 0.650013 | 8_1:+6622667 | Msa1175300:CDS |
| TCATGGAGTTCAACACACTC+CGG | 0.650243 | 8_1:-6622758 | None:intergenic |
| ATGGACAAAGAATCATCACA+TGG | 0.659499 | 8_1:-6619793 | None:intergenic |
| AAAAGGCTTCTAGAGCAGGA+AGG | 0.661074 | 8_1:-6622732 | None:intergenic |
| TATATGCGCTTGAATGTGCA+TGG | 0.664449 | 8_1:+6621441 | Msa1175300:CDS |
| CAGTTCTAGGCAGATGCGAG+GGG | 0.665952 | 8_1:+6619708 | Msa1175300:CDS |
| TGGGTTACTTATGAGGAAGG+TGG | 0.669868 | 8_1:+6622646 | Msa1175300:CDS |
| TTGAACCTAGATGGTTCACA+AGG | 0.675618 | 8_1:-6622845 | None:intergenic |
| GGGAATCTATGTGATAAGGA+CGG | 0.676526 | 8_1:-6621346 | None:intergenic |
| TTTCTATTTGCAACACCACG+AGG | 0.682690 | 8_1:-6622589 | None:intergenic |
| CCTTCCTCATAAGTAACCCA+CGG | 0.683237 | 8_1:-6622643 | None:intergenic |
| ATCAACACAAGCATCTTCGG+AGG | 0.684135 | 8_1:-6621798 | None:intergenic |
| TATGGTAACAACTCCCTGAG+AGG | 0.687896 | 8_1:+6623012 | Msa1175300:three_prime_UTR |
| TGAGTCTGCGGATGAAACGT+CGG | 0.688650 | 8_1:+6619306 | Msa1175300:CDS |
| TGAGAGACGATAATAAGGAG+AGG | 0.693389 | 8_1:+6619329 | Msa1175300:CDS |
| TGGACAAAGAATCATCACAT+GGG | 0.713811 | 8_1:-6619792 | None:intergenic |
| TAGATTCTGATGATCCCATG+GGG | 0.715010 | 8_1:+6621621 | Msa1175300:CDS |
| TGTCATTGAGAAGATCGAAG+GGG | 0.729759 | 8_1:-6618269 | None:intergenic |
| TGTCTGGAGATACTATTGCG+AGG | 0.734057 | 8_1:+6621414 | Msa1175300:CDS |
| ATTGCAGGGAGATGAGTCTG+CGG | 0.754277 | 8_1:+6619294 | Msa1175300:intron |
| AGATTCTGATGATCCCATGG+GGG | 0.759992 | 8_1:+6621622 | Msa1175300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTAAAATATAATCAATATT+TGG | - | chr8_1:6620207-6620226 | None:intergenic | 10.0% |
| !! | GGAAAATAAAAATAAAATAT+GGG | - | chr8_1:6620303-6620322 | None:intergenic | 10.0% |
| !! | AGGAAAATAAAAATAAAATA+TGG | - | chr8_1:6620304-6620323 | None:intergenic | 10.0% |
| !!! | TAAATATTTGATGTTTTTTT+GGG | - | chr8_1:6622250-6622269 | None:intergenic | 10.0% |
| !!! | TTAAATATTTGATGTTTTTT+TGG | - | chr8_1:6622251-6622270 | None:intergenic | 10.0% |
| !!! | ATAAAAAAAAATTTAGAACC+TGG | - | chr8_1:6618314-6618333 | None:intergenic | 15.0% |
| !!! | TAATTTTTCATTAGCTATAT+TGG | + | chr8_1:6618665-6618684 | Msa1175300:intron | 15.0% |
| !! | TGTTATATAAAGAATGATAT+AGG | + | chr8_1:6618870-6618889 | Msa1175300:intron | 15.0% |
| !! | TATTTAATGAAAACAACTTA+TGG | - | chr8_1:6619016-6619035 | None:intergenic | 15.0% |
| !!! | ATTTATAATATTTTGTGCTT+TGG | + | chr8_1:6619886-6619905 | Msa1175300:intron | 15.0% |
| !! | AATAGAAAAAAATAACATGA+TGG | + | chr8_1:6620162-6620181 | Msa1175300:intron | 15.0% |
| !! | ATAGAAAAAAATAACATGAT+GGG | + | chr8_1:6620163-6620182 | Msa1175300:intron | 15.0% |
| !!! | ATATTTTGTATTTTGTGTAA+TGG | + | chr8_1:6621108-6621127 | Msa1175300:intron | 15.0% |
| !! | ATAAAAGTAGAAATTCATAA+TGG | - | chr8_1:6622935-6622954 | None:intergenic | 15.0% |
| !! | AAGTATTATAGAAAATGACA+TGG | + | chr8_1:6618532-6618551 | Msa1175300:intron | 20.0% |
| !! | AGTATTATAGAAAATGACAT+GGG | + | chr8_1:6618533-6618552 | Msa1175300:intron | 20.0% |
| !! | TCATTCTTTATATAACAATG+TGG | - | chr8_1:6618867-6618886 | None:intergenic | 20.0% |
| !!! | AGAATGATATAGGTTTTAAT+TGG | + | chr8_1:6618880-6618899 | Msa1175300:intron | 20.0% |
| !!! | GTTGTTTTCATTAAATATAC+CGG | + | chr8_1:6619019-6619038 | Msa1175300:intron | 20.0% |
| !! | TTACCTTAAAGATAGATTAT+TGG | + | chr8_1:6619198-6619217 | Msa1175300:intron | 20.0% |
| !! | AAACCAATAATCTATCTTTA+AGG | - | chr8_1:6619204-6619223 | None:intergenic | 20.0% |
| !!! | TTCTTCTTTTTCTTTGATTT+TGG | - | chr8_1:6619397-6619416 | None:intergenic | 20.0% |
| !! | GAATTTCTTGAAATAAAGAA+CGG | + | chr8_1:6619817-6619836 | Msa1175300:CDS | 20.0% |
| !! | GAACTTTGAACAAAAAAAAA+AGG | + | chr8_1:6620120-6620139 | Msa1175300:intron | 20.0% |
| !!! | TGTTATTTTTTTCTATTCCA+AGG | - | chr8_1:6620159-6620178 | None:intergenic | 20.0% |
| !! | CACACAATCTAATATATATA+TGG | + | chr8_1:6620237-6620256 | Msa1175300:intron | 20.0% |
| !! | TTGTATATAAGGTTCATATT+AGG | + | chr8_1:6620655-6620674 | Msa1175300:intron | 20.0% |
| !! | TGTATATAAGGTTCATATTA+GGG | + | chr8_1:6620656-6620675 | Msa1175300:intron | 20.0% |
| !! | ATATTGCATAATTCAACATT+TGG | - | chr8_1:6620742-6620761 | None:intergenic | 20.0% |
| !!! | AGGAAATATCAATTAGTTTA+TGG | + | chr8_1:6620880-6620899 | Msa1175300:intron | 20.0% |
| !! | TTCAATCACAGATTAAAATA+GGG | - | chr8_1:6621136-6621155 | None:intergenic | 20.0% |
| !! | TATCTACAAAGTAAAAAAGA+GGG | - | chr8_1:6621233-6621252 | None:intergenic | 20.0% |
| !! | ATATCTACAAAGTAAAAAAG+AGG | - | chr8_1:6621234-6621253 | None:intergenic | 20.0% |
| !! | ATTTATGTCATTAATTGCTT+TGG | - | chr8_1:6621303-6621322 | None:intergenic | 20.0% |
| !! | AAAGCAATTAATGACATAAA+TGG | + | chr8_1:6621302-6621321 | Msa1175300:CDS | 20.0% |
| !! | ATAAAAGTGATAACTCTATA+TGG | + | chr8_1:6621717-6621736 | Msa1175300:CDS | 20.0% |
| !! | TATTTATGATCTTCAAAACT+TGG | + | chr8_1:6622319-6622338 | Msa1175300:intron | 20.0% |
| !! | AATATAATTGCCATATACTA+TGG | + | chr8_1:6622866-6622885 | Msa1175300:three_prime_UTR | 20.0% |
| !!! | TAGAAATTCATAATGGAAAA+AGG | - | chr8_1:6622928-6622947 | None:intergenic | 20.0% |
| !! | TCACATTAAGAATTTAGTTA+TGG | + | chr8_1:6622994-6623013 | Msa1175300:three_prime_UTR | 20.0% |
| !!! | AAAATTTAGAACCTGGTTTT+CGG | - | chr8_1:6618307-6618326 | None:intergenic | 25.0% |
| ! | GTTAGCTAAAAATTCTAACT+TGG | + | chr8_1:6618430-6618449 | Msa1175300:intron | 25.0% |
| ! | AATTCCATTAGTGTTAGTTA+TGG | + | chr8_1:6618485-6618504 | Msa1175300:intron | 25.0% |
| ! | AAAACTTATGAACATCTCAT+AGG | + | chr8_1:6618711-6618730 | Msa1175300:intron | 25.0% |
| ! | TATTGAATAAGCTTAACAGT+TGG | + | chr8_1:6618840-6618859 | Msa1175300:intron | 25.0% |
| ! | ATTGAATAAGCTTAACAGTT+GGG | + | chr8_1:6618841-6618860 | Msa1175300:intron | 25.0% |
| !! | TTTTCATAAGCTCTCTTAAA+CGG | + | chr8_1:6619093-6619112 | Msa1175300:intron | 25.0% |
| !! | TATTCTTATCAGCTCATTTT+CGG | - | chr8_1:6619635-6619654 | None:intergenic | 25.0% |
| ! | AATGAGCTGATAAGAATATT+TGG | + | chr8_1:6619637-6619656 | Msa1175300:CDS | 25.0% |
| ! | GATAAGAATATTTGGATCTA+AGG | + | chr8_1:6619645-6619664 | Msa1175300:CDS | 25.0% |
| !! | CTTTATTTCAAGAAATTCCA+TGG | - | chr8_1:6619815-6619834 | None:intergenic | 25.0% |
| !!! | TTTGTATGTGCTTATTTCTA+TGG | - | chr8_1:6620034-6620053 | None:intergenic | 25.0% |
| ! | ATGGGAAAATTAATTTCGTT+GGG | + | chr8_1:6620181-6620200 | Msa1175300:intron | 25.0% |
| !! | ACATATTCACTGAACTTTTA+GGG | - | chr8_1:6620457-6620476 | None:intergenic | 25.0% |
| ! | GTAGAACTGCAATATATATA+AGG | - | chr8_1:6620685-6620704 | None:intergenic | 25.0% |
| ! | TTATCTTCATGATAATTGTG+AGG | + | chr8_1:6620761-6620780 | Msa1175300:intron | 25.0% |
| ! | CATAAAAATAATGTATTGCG+AGG | + | chr8_1:6620860-6620879 | Msa1175300:intron | 25.0% |
| !!! | ATTATGTGCTTTATTTGTGT+TGG | + | chr8_1:6621074-6621093 | Msa1175300:intron | 25.0% |
| ! | CTTCAATCACAGATTAAAAT+AGG | - | chr8_1:6621137-6621156 | None:intergenic | 25.0% |
| ! | TCGAGAGAAATTATCTTATA+TGG | + | chr8_1:6622005-6622024 | Msa1175300:CDS | 25.0% |
| ! | AGAGAAATTATCTTATATGG+AGG | + | chr8_1:6622008-6622027 | Msa1175300:CDS | 25.0% |
| ! | ATAAAAGTGAAGTTAACGAT+TGG | + | chr8_1:6622095-6622114 | Msa1175300:CDS | 25.0% |
| ! | TCTATAAATGTCGTTAAAGA+TGG | - | chr8_1:6622291-6622310 | None:intergenic | 25.0% |
| ! | TGGTGCAAATTATTTCAAAT+TGG | + | chr8_1:6622339-6622358 | Msa1175300:intron | 25.0% |
| ! | AGAAAATCTTCAACAGTTTA+TGG | + | chr8_1:6622495-6622514 | Msa1175300:CDS | 25.0% |
| ! | GAAAATCTTCAACAGTTTAT+GGG | + | chr8_1:6622496-6622515 | Msa1175300:CDS | 25.0% |
| ! | GATGATAATGAACAAGAAGA+AGG | + | chr8_1:6618222-6618241 | Msa1175300:CDS | 30.0% |
| !! | AAATTTAGAACCTGGTTTTC+GGG | - | chr8_1:6618306-6618325 | None:intergenic | 30.0% |
| TCTAACTTGGCATTTGTATT+TGG | + | chr8_1:6618443-6618462 | Msa1175300:intron | 30.0% | |
| TGGCATTTGTATTTGGAAAT+AGG | + | chr8_1:6618450-6618469 | Msa1175300:intron | 30.0% | |
| ! | TTTTCATAAGCTCTCTCAAA+TGG | + | chr8_1:6618744-6618763 | Msa1175300:intron | 30.0% |
| ATATAACACTATAACGCCAT+GGG | - | chr8_1:6618823-6618842 | None:intergenic | 30.0% | |
| AATATAACACTATAACGCCA+TGG | - | chr8_1:6618824-6618843 | None:intergenic | 30.0% | |
| !! | AATTTGGTTGTATTGATTGC+AGG | + | chr8_1:6619279-6619298 | Msa1175300:intron | 30.0% |
| !! | ATTTGGTTGTATTGATTGCA+GGG | + | chr8_1:6619280-6619299 | Msa1175300:intron | 30.0% |
| GAATAAGAAGAAGAAAAGCA+AGG | + | chr8_1:6619414-6619433 | Msa1175300:CDS | 30.0% | |
| AGACATGATCTTAGAAGATT+TGG | + | chr8_1:6619477-6619496 | Msa1175300:CDS | 30.0% | |
| ! | TTTAGGATCCACTTGTAATA+TGG | - | chr8_1:6619602-6619621 | None:intergenic | 30.0% |
| !!! | ATATTTTGTGCTTTGGCTTT+TGG | + | chr8_1:6619893-6619912 | Msa1175300:intron | 30.0% |
| !!! | TATTTTGTGCTTTGGCTTTT+GGG | + | chr8_1:6619894-6619913 | Msa1175300:intron | 30.0% |
| ATGTCTGGTTGTATATGTAA+AGG | + | chr8_1:6619938-6619957 | Msa1175300:intron | 30.0% | |
| CATGTTTATGATTCGATAGT+AGG | - | chr8_1:6620005-6620024 | None:intergenic | 30.0% | |
| GAAGAATCAAACATAGAACA+TGG | + | chr8_1:6620075-6620094 | Msa1175300:intron | 30.0% | |
| TTTGTTCAAAGTTCTTCGTA+AGG | - | chr8_1:6620114-6620133 | None:intergenic | 30.0% | |
| TCTATTCCAAGGTCTTAAAT+TGG | - | chr8_1:6620148-6620167 | None:intergenic | 30.0% | |
| GATGGGAAAATTAATTTCGT+TGG | + | chr8_1:6620180-6620199 | Msa1175300:intron | 30.0% | |
| TATATATATGGAGCCTAGTA+TGG | + | chr8_1:6620249-6620268 | Msa1175300:intron | 30.0% | |
| ATATATATGGAGCCTAGTAT+GGG | + | chr8_1:6620250-6620269 | Msa1175300:intron | 30.0% | |
| TTAAATATAAGGCCCATACT+AGG | - | chr8_1:6620265-6620284 | None:intergenic | 30.0% | |
| CCTTATATTTAAGAGTCCAT+GGG | + | chr8_1:6620273-6620292 | Msa1175300:intron | 30.0% | |
| AATGAGCTACTAATGCAAAA+GGG | - | chr8_1:6620432-6620451 | None:intergenic | 30.0% | |
| ! | GACATATTCACTGAACTTTT+AGG | - | chr8_1:6620458-6620477 | None:intergenic | 30.0% |
| ATAAATTAACCTCCAATTGC+CGG | + | chr8_1:6620605-6620624 | Msa1175300:intron | 30.0% | |
| ACTGTGGACAATTGTATATA+AGG | + | chr8_1:6620644-6620663 | Msa1175300:intron | 30.0% | |
| ACTAGTATATATCGCATCTA+TGG | - | chr8_1:6620806-6620825 | None:intergenic | 30.0% | |
| ATAGATGCGATATATACTAG+TGG | + | chr8_1:6620805-6620824 | Msa1175300:intron | 30.0% | |
| AAAACCTTCAATCGAATGAT+TGG | + | chr8_1:6620941-6620960 | Msa1175300:intron | 30.0% | |
| !!! | ATTCCATTGGTTTTGACTTT+TGG | + | chr8_1:6620991-6621010 | Msa1175300:intron | 30.0% |
| !!! | TTCCATTGGTTTTGACTTTT+GGG | + | chr8_1:6620992-6621011 | Msa1175300:intron | 30.0% |
| GTAGTTAAAAGGGATTCAAA+AGG | - | chr8_1:6621203-6621222 | None:intergenic | 30.0% | |
| TTCAAACGATTTCTGATACT+GGG | - | chr8_1:6621276-6621295 | None:intergenic | 30.0% | |
| ATATTCTGCCATTGTTAGAA+GGG | - | chr8_1:6621369-6621388 | None:intergenic | 30.0% | |
| AATATTCTGCCATTGTTAGA+AGG | - | chr8_1:6621370-6621389 | None:intergenic | 30.0% | |
| AACAATGGCAGAATATTTCA+AGG | + | chr8_1:6621373-6621392 | Msa1175300:CDS | 30.0% | |
| TATCGTGTTTGTACTTCAAT+TGG | - | chr8_1:6621499-6621518 | None:intergenic | 30.0% | |
| ! | ACTAGCTTCTTTATAACTGA+AGG | - | chr8_1:6621875-6621894 | None:intergenic | 30.0% |
| TTAATCAAGTGATCTTGAGA+TGG | - | chr8_1:6621977-6621996 | None:intergenic | 30.0% | |
| !! | AAAATCCCCGTTTACTTTTA+CGG | + | chr8_1:6622192-6622211 | Msa1175300:intron | 30.0% |
| AAGAATGCCGTAAAAGTAAA+CGG | - | chr8_1:6622202-6622221 | None:intergenic | 30.0% | |
| TACTCATTCATAACTTCGAT+CGG | - | chr8_1:6622384-6622403 | None:intergenic | 30.0% | |
| AAGTTATGAATGAGTACATG+TGG | + | chr8_1:6622388-6622407 | Msa1175300:intron | 30.0% | |
| ! | TTTACAATCTTTTGCTTGTC+AGG | + | chr8_1:6622419-6622438 | Msa1175300:intron | 30.0% |
| ! | ACTGTTGAAGATTTTCTTGT+GGG | - | chr8_1:6622492-6622511 | None:intergenic | 30.0% |
| ! | AACTGTTGAAGATTTTCTTG+TGG | - | chr8_1:6622493-6622512 | None:intergenic | 30.0% |
| GCAATTATATTGAACCTAGA+TGG | - | chr8_1:6622857-6622876 | None:intergenic | 30.0% | |
| AAATCTGACACCATAGTATA+TGG | - | chr8_1:6622879-6622898 | None:intergenic | 30.0% | |
| !! | ATACTATGGTGTCAGATTTT+TGG | + | chr8_1:6622880-6622899 | Msa1175300:three_prime_UTR | 30.0% |
| !! | TACTATGGTGTCAGATTTTT+GGG | + | chr8_1:6622881-6622900 | Msa1175300:three_prime_UTR | 30.0% |
| TTGTCATTGAGAAGATCGAA+GGG | - | chr8_1:6618273-6618292 | None:intergenic | 35.0% | |
| ATTGTCATTGAGAAGATCGA+AGG | - | chr8_1:6618274-6618293 | None:intergenic | 35.0% | |
| ! | ACCCTTTTGAATTTTGCAAC+TGG | + | chr8_1:6618375-6618394 | Msa1175300:intron | 35.0% |
| CCCAGTTGCAAAATTCAAAA+GGG | - | chr8_1:6618379-6618398 | None:intergenic | 35.0% | |
| ! | CCCTTTTGAATTTTGCAACT+GGG | + | chr8_1:6618376-6618395 | Msa1175300:intron | 35.0% |
| ACCCAGTTGCAAAATTCAAA+AGG | - | chr8_1:6618380-6618399 | None:intergenic | 35.0% | |
| GACACCATAACTAACACTAA+TGG | - | chr8_1:6618492-6618511 | None:intergenic | 35.0% | |
| GCTTATTTAAGCTTACCTAC+TGG | - | chr8_1:6618787-6618806 | None:intergenic | 35.0% | |
| CTTCTTTCTATAAAGCTCTC+CGG | - | chr8_1:6619041-6619060 | None:intergenic | 35.0% | |
| GCTTATTGCTCATCTGAATT+TGG | + | chr8_1:6619263-6619282 | Msa1175300:intron | 35.0% | |
| !! | TAATGCTGTTTCCGGTAAAA+AGG | + | chr8_1:6619438-6619457 | Msa1175300:CDS | 35.0% |
| !! | AATGCTGTTTCCGGTAAAAA+GGG | + | chr8_1:6619439-6619458 | Msa1175300:CDS | 35.0% |
| ! | CTTTTCATCTCCCTTTTTAC+CGG | - | chr8_1:6619452-6619471 | None:intergenic | 35.0% |
| ! | TTTTCGGCACTCAAATGTTT+AGG | - | chr8_1:6619619-6619638 | None:intergenic | 35.0% |
| GAACGGTCTTCTTAAGATTA+TGG | - | chr8_1:6619747-6619766 | None:intergenic | 35.0% | |
| TGGACAAAGAATCATCACAT+GGG | - | chr8_1:6619795-6619814 | None:intergenic | 35.0% | |
| ATGGACAAAGAATCATCACA+TGG | - | chr8_1:6619796-6619815 | None:intergenic | 35.0% | |
| ATGTGATGATTCTTTGTCCA+TGG | + | chr8_1:6619795-6619814 | Msa1175300:CDS | 35.0% | |
| AGAACGGATATCACTACTTT+AGG | + | chr8_1:6619833-6619852 | Msa1175300:CDS | 35.0% | |
| GGTTGTATATGTAAAGGCTA+AGG | + | chr8_1:6619944-6619963 | Msa1175300:intron | 35.0% | |
| !! | CACATCACACTTTTGAAGAT+TGG | - | chr8_1:6619981-6620000 | None:intergenic | 35.0% |
| AAAGATGTTGTGTCCATTGA+TGG | + | chr8_1:6620052-6620071 | Msa1175300:intron | 35.0% | |
| AAGATGTTGTGTCCATTGAT+GGG | + | chr8_1:6620053-6620072 | Msa1175300:intron | 35.0% | |
| TGTTTGATTCTTCCCATCAA+TGG | - | chr8_1:6620068-6620087 | None:intergenic | 35.0% | |
| ! | AAGGTTCCAATTTAAGACCT+TGG | + | chr8_1:6620139-6620158 | Msa1175300:intron | 35.0% |
| GCCTTATATTTAAGAGTCCA+TGG | + | chr8_1:6620272-6620291 | Msa1175300:intron | 35.0% | |
| CCCATGGACTCTTAAATATA+AGG | - | chr8_1:6620276-6620295 | None:intergenic | 35.0% | |
| ATAAAATATGGGTTCACCCA+TGG | - | chr8_1:6620292-6620311 | None:intergenic | 35.0% | |
| ! | CTGACACAAGTCTTATATCT+GGG | + | chr8_1:6620322-6620341 | Msa1175300:intron | 35.0% |
| TTGATACAAAGGACGCTAAT+AGG | - | chr8_1:6620387-6620406 | None:intergenic | 35.0% | |
| GAATGAGCTACTAATGCAAA+AGG | - | chr8_1:6620433-6620452 | None:intergenic | 35.0% | |
| TAAGATGCAGTGAATCATTG+TGG | - | chr8_1:6620488-6620507 | None:intergenic | 35.0% | |
| !! | AAACTCATTTTGCTGTCTCA+AGG | + | chr8_1:6620522-6620541 | Msa1175300:intron | 35.0% |
| CACTGCAAAAAGAGTGAAAA+TGG | + | chr8_1:6620579-6620598 | Msa1175300:intron | 35.0% | |
| CAATTGCCGGTAAAAACAAT+GGG | + | chr8_1:6620618-6620637 | Msa1175300:intron | 35.0% | |
| CAATCCAATCATTCGATTGA+AGG | - | chr8_1:6620948-6620967 | None:intergenic | 35.0% | |
| GAATGATTGGATTGCATGAA+GGG | + | chr8_1:6620954-6620973 | Msa1175300:intron | 35.0% | |
| ! | ATATGCACAGTTGATTCCAT+TGG | + | chr8_1:6620978-6620997 | Msa1175300:intron | 35.0% |
| AACCCAAAAGTCAAAACCAA+TGG | - | chr8_1:6620997-6621016 | None:intergenic | 35.0% | |
| !!! | GGTTTTGACTTTTGGGTTTA+TGG | + | chr8_1:6620999-6621018 | Msa1175300:intron | 35.0% |
| GGTTTATGGTTAACAAGAGT+GGG | + | chr8_1:6621013-6621032 | Msa1175300:intron | 35.0% | |
| ! | CATAGGGTTTTCTATCTATC+TGG | + | chr8_1:6621045-6621064 | Msa1175300:intron | 35.0% |
| GGGTTGAACAGTAGTTAAAA+GGG | - | chr8_1:6621213-6621232 | None:intergenic | 35.0% | |
| AGGGTTGAACAGTAGTTAAA+AGG | - | chr8_1:6621214-6621233 | None:intergenic | 35.0% | |
| CTTCAAACGATTTCTGATAC+TGG | - | chr8_1:6621277-6621296 | None:intergenic | 35.0% | |
| AGAAGGGAATCTATGTGATA+AGG | - | chr8_1:6621353-6621372 | None:intergenic | 35.0% | |
| CATAGATTCCCTTCTAACAA+TGG | + | chr8_1:6621358-6621377 | Msa1175300:CDS | 35.0% | |
| GCAGAATATTTCAAGGTAGT+GGG | + | chr8_1:6621380-6621399 | Msa1175300:CDS | 35.0% | |
| GTGAAAAGAGCTGTGAATAA+AGG | - | chr8_1:6621530-6621549 | None:intergenic | 35.0% | |
| TTTCACTCACATGAAAAACC+TGG | + | chr8_1:6621544-6621563 | Msa1175300:CDS | 35.0% | |
| GCAAGGGAAAAAGAGAAATT+TGG | - | chr8_1:6621749-6621768 | None:intergenic | 35.0% | |
| AGAATCAACACAAGCATCTT+CGG | - | chr8_1:6621804-6621823 | None:intergenic | 35.0% | |
| TGTTTGATCTGATCGGAAAA+AGG | - | chr8_1:6621948-6621967 | None:intergenic | 35.0% | |
| ! | TTTTTCCGATCAGATCAAAC+AGG | + | chr8_1:6621947-6621966 | Msa1175300:CDS | 35.0% |
| GAATTCCTGTTTGATCTGAT+CGG | - | chr8_1:6621955-6621974 | None:intergenic | 35.0% | |
| !! | CACTTACTCATTTTTCTCAG+AGG | - | chr8_1:6622146-6622165 | None:intergenic | 35.0% |
| AGAATGCCGTAAAAGTAAAC+GGG | - | chr8_1:6622201-6622220 | None:intergenic | 35.0% | |
| ! | AATCTTTTGCTTGTCAGGTA+TGG | + | chr8_1:6622424-6622443 | Msa1175300:intron | 35.0% |
| TGATTTCTCCGATTCAGTAA+CGG | + | chr8_1:6622462-6622481 | Msa1175300:CDS | 35.0% | |
| !! | AACCAATTTGTTAACCAGCA+AGG | + | chr8_1:6622553-6622572 | Msa1175300:CDS | 35.0% |
| AGCAAGATAATCAGTGATAC+TGG | + | chr8_1:6622698-6622717 | Msa1175300:exon | 35.0% | |
| ACATGAAAGACATCTCATCA+TGG | - | chr8_1:6622778-6622797 | None:intergenic | 35.0% | |
| TAAGATCATTTGACCTCTCA+GGG | - | chr8_1:6623028-6623047 | None:intergenic | 35.0% | |
| ATAAGATCATTTGACCTCTC+AGG | - | chr8_1:6623029-6623048 | None:intergenic | 35.0% | |
| TGAAACTCGCAAAACGATGT+CGG | + | chr8_1:6618122-6618141 | Msa1175300:exon | 40.0% | |
| TGTCATTGAGAAGATCGAAG+GGG | - | chr8_1:6618272-6618291 | None:intergenic | 40.0% | |
| CTTAAACGGTCTCAGAAAGT+AGG | + | chr8_1:6619107-6619126 | Msa1175300:intron | 40.0% | |
| AGTCAATCCAAACAAGCACA+TGG | + | chr8_1:6619143-6619162 | Msa1175300:intron | 40.0% | |
| TACAACACCATGTGCTTGTT+TGG | - | chr8_1:6619153-6619172 | None:intergenic | 40.0% | |
| TTGCTCGTTCGAAAGAATGT+GGG | + | chr8_1:6619225-6619244 | Msa1175300:intron | 40.0% | |
| TGAGAGACGATAATAAGGAG+AGG | + | chr8_1:6619329-6619348 | Msa1175300:CDS | 40.0% | |
| ! | CTGAGCAGAACTTTTTAACG+CGG | - | chr8_1:6619359-6619378 | None:intergenic | 40.0% |
| !! | AGCAAGGATAATGCTGTTTC+CGG | + | chr8_1:6619430-6619449 | Msa1175300:CDS | 40.0% |
| CGGTAAAAAGGGAGATGAAA+AGG | + | chr8_1:6619450-6619469 | Msa1175300:CDS | 40.0% | |
| ! | GAGCAACATGTTTCTACTGA+AGG | + | chr8_1:6619523-6619542 | Msa1175300:CDS | 40.0% |
| AGGAAAAGCAGTGAATGCTA+AGG | + | chr8_1:6619543-6619562 | Msa1175300:CDS | 40.0% | |
| GGACAAAAGTAGAGCTGTTA+AGG | + | chr8_1:6619564-6619583 | Msa1175300:CDS | 40.0% | |
| CAAAAGTAGAGCTGTTAAGG+AGG | + | chr8_1:6619567-6619586 | Msa1175300:CDS | 40.0% | |
| TGCTGTCTCCATATTACAAG+TGG | + | chr8_1:6619591-6619610 | Msa1175300:CDS | 40.0% | |
| ACAATCAACCAAGCAGTTCT+AGG | + | chr8_1:6619695-6619714 | Msa1175300:CDS | 40.0% | |
| CCAGATATAAGACTTGTGTC+AGG | - | chr8_1:6620324-6620343 | None:intergenic | 40.0% | |
| ! | CCTGACACAAGTCTTATATC+TGG | + | chr8_1:6620321-6620340 | Msa1175300:intron | 40.0% |
| TGGGCAAGAATGTTGAATAG+CGG | + | chr8_1:6620341-6620360 | Msa1175300:intron | 40.0% | |
| ATACAAAGGACGCTAATAGG+TGG | - | chr8_1:6620384-6620403 | None:intergenic | 40.0% | |
| GTGACTGGTGATTGATACAA+AGG | - | chr8_1:6620398-6620417 | None:intergenic | 40.0% | |
| ATGCAAAAGGGTGAAGATAG+TGG | - | chr8_1:6620420-6620439 | None:intergenic | 40.0% | |
| !!! | TTGTTTTTACCGGCAATTGG+AGG | - | chr8_1:6620617-6620636 | None:intergenic | 40.0% |
| !!! | CCATTGTTTTTACCGGCAAT+TGG | - | chr8_1:6620620-6620639 | None:intergenic | 40.0% |
| CCAATTGCCGGTAAAAACAA+TGG | + | chr8_1:6620617-6620636 | Msa1175300:intron | 40.0% | |
| !!! | AGTGCACCCATTGTTTTTAC+CGG | - | chr8_1:6620627-6620646 | None:intergenic | 40.0% |
| TAAAAACAATGGGTGCACTG+TGG | + | chr8_1:6620628-6620647 | Msa1175300:intron | 40.0% | |
| CGAATGATTGGATTGCATGA+AGG | + | chr8_1:6620953-6620972 | Msa1175300:intron | 40.0% | |
| GGGTTTATGGTTAACAAGAG+TGG | + | chr8_1:6621012-6621031 | Msa1175300:intron | 40.0% | |
| ATGGTTAACAAGAGTGGGAT+TGG | + | chr8_1:6621018-6621037 | Msa1175300:intron | 40.0% | |
| TGGTTAACAAGAGTGGGATT+GGG | + | chr8_1:6621019-6621038 | Msa1175300:intron | 40.0% | |
| GGGAATCTATGTGATAAGGA+CGG | - | chr8_1:6621349-6621368 | None:intergenic | 40.0% | |
| GGCAGAATATTTCAAGGTAG+TGG | + | chr8_1:6621379-6621398 | Msa1175300:CDS | 40.0% | |
| TATATGCGCTTGAATGTGCA+TGG | + | chr8_1:6621441-6621460 | Msa1175300:CDS | 40.0% | |
| ACTAGATTCTGATGATCCCA+TGG | + | chr8_1:6621619-6621638 | Msa1175300:CDS | 40.0% | |
| CTAGATTCTGATGATCCCAT+GGG | + | chr8_1:6621620-6621639 | Msa1175300:CDS | 40.0% | |
| TAGATTCTGATGATCCCATG+GGG | + | chr8_1:6621621-6621640 | Msa1175300:CDS | 40.0% | |
| !! | GCATTGACTACTTTGCTCTA+CGG | + | chr8_1:6621654-6621673 | Msa1175300:CDS | 40.0% |
| !! | CTTTTTCCCTTGCCATTTGT+CGG | + | chr8_1:6621756-6621775 | Msa1175300:CDS | 40.0% |
| GTAAAACCGACAAATGGCAA+GGG | - | chr8_1:6621765-6621784 | None:intergenic | 40.0% | |
| CTCAAGGTAAAACCGACAAA+TGG | - | chr8_1:6621771-6621790 | None:intergenic | 40.0% | |
| TACCATTGAAAGATCGTGCA+TGG | + | chr8_1:6621903-6621922 | Msa1175300:CDS | 40.0% | |
| ! | ATCAGCAGTTTTTGCAGATC+AGG | - | chr8_1:6622037-6622056 | None:intergenic | 40.0% |
| GATCTGCAAAAACTGCTGAT+TGG | + | chr8_1:6622037-6622056 | Msa1175300:CDS | 40.0% | |
| GAATGCCGTAAAAGTAAACG+GGG | - | chr8_1:6622200-6622219 | None:intergenic | 40.0% | |
| ! | ACGGCATTCTTTTGTAGAAG+TGG | + | chr8_1:6622211-6622230 | Msa1175300:intron | 40.0% |
| TGTCAGGTATGGACATTTGT+TGG | + | chr8_1:6622435-6622454 | Msa1175300:intron | 40.0% | |
| AACAGTTTATGGGCATTCCA+AGG | + | chr8_1:6622506-6622525 | Msa1175300:CDS | 40.0% | |
| ACAGTTTATGGGCATTCCAA+GGG | + | chr8_1:6622507-6622526 | Msa1175300:CDS | 40.0% | |
| ! | TGCCTTGCTGGTTAACAAAT+TGG | - | chr8_1:6622558-6622577 | None:intergenic | 40.0% |
| TTTGTTAACCAGCAAGGCAA+TGG | + | chr8_1:6622559-6622578 | Msa1175300:CDS | 40.0% | |
| TTTCTATTTGCAACACCACG+AGG | - | chr8_1:6622592-6622611 | None:intergenic | 40.0% | |
| !! | GAAAAAAAGGCTTCTAGAGC+AGG | - | chr8_1:6622739-6622758 | None:intergenic | 40.0% |
| !!! | GCTCTAGAAGCCTTTTTTTC+CGG | + | chr8_1:6622739-6622758 | Msa1175300:three_prime_UTR | 40.0% |
| TCAACACACTCCGGAAAAAA+AGG | - | chr8_1:6622752-6622771 | None:intergenic | 40.0% | |
| TCATGTATAGAGCGACGTTT+AGG | + | chr8_1:6622792-6622811 | Msa1175300:three_prime_UTR | 40.0% | |
| CATGTATAGAGCGACGTTTA+GGG | + | chr8_1:6622793-6622812 | Msa1175300:three_prime_UTR | 40.0% | |
| TTGATCCTTGTGAACCATCT+AGG | + | chr8_1:6622840-6622859 | Msa1175300:three_prime_UTR | 40.0% | |
| TTGAACCTAGATGGTTCACA+AGG | - | chr8_1:6622848-6622867 | None:intergenic | 40.0% | |
| GAAACTCGCAAAACGATGTC+GGG | + | chr8_1:6618123-6618142 | Msa1175300:exon | 45.0% | |
| ! | GTTGATTGTTGAAGGTGCAG+TGG | - | chr8_1:6618250-6618269 | None:intergenic | 45.0% |
| ! | TCGAAGGGGTTGATTGTTGA+AGG | - | chr8_1:6618258-6618277 | None:intergenic | 45.0% |
| TGATTCTGAACCCGAAAACC+AGG | + | chr8_1:6618293-6618312 | Msa1175300:CDS | 45.0% | |
| TCACAAGTGCTTATGCCAGT+AGG | + | chr8_1:6618769-6618788 | Msa1175300:intron | 45.0% | |
| AACACTATAACGCCATGGGA+CGG | - | chr8_1:6618819-6618838 | None:intergenic | 45.0% | |
| CTTGCTCGTTCGAAAGAATG+TGG | + | chr8_1:6619224-6619243 | Msa1175300:intron | 45.0% | |
| TGCTCGTTCGAAAGAATGTG+GGG | + | chr8_1:6619226-6619245 | Msa1175300:intron | 45.0% | |
| GTCGGTGAGAGACGATAATA+AGG | + | chr8_1:6619324-6619343 | Msa1175300:CDS | 45.0% | |
| CGCGTTAAAAAGTTCTGCTC+AGG | + | chr8_1:6619357-6619376 | Msa1175300:CDS | 45.0% | |
| ! | GTTTGCTGGAGTGACAAGAA+CGG | - | chr8_1:6619764-6619783 | None:intergenic | 45.0% |
| TTGTCACTCCAGCAAACACT+TGG | + | chr8_1:6619767-6619786 | Msa1175300:CDS | 45.0% | |
| ACCAGACATGCATACAGAGA+GGG | - | chr8_1:6619927-6619946 | None:intergenic | 45.0% | |
| AACCAGACATGCATACAGAG+AGG | - | chr8_1:6619928-6619947 | None:intergenic | 45.0% | |
| GGGCAAGAATGTTGAATAGC+GGG | + | chr8_1:6620342-6620361 | Msa1175300:intron | 45.0% | |
| GGCAAGAATGTTGAATAGCG+GGG | + | chr8_1:6620343-6620362 | Msa1175300:intron | 45.0% | |
| ! | GAGAGATGCACTGATGTCAA+CGG | + | chr8_1:6620546-6620565 | Msa1175300:intron | 45.0% |
| TTCTGATACTGGGAGTAGGA+TGG | - | chr8_1:6621266-6621285 | None:intergenic | 45.0% | |
| CGATTTCTGATACTGGGAGT+AGG | - | chr8_1:6621270-6621289 | None:intergenic | 45.0% | |
| TGTCTGGAGATACTATTGCG+AGG | + | chr8_1:6621414-6621433 | Msa1175300:CDS | 45.0% | |
| AATTGGCAATTACCCTGCAG+TGG | - | chr8_1:6621482-6621501 | None:intergenic | 45.0% | |
| ATGAAAAACCTGGATCGACG+AGG | + | chr8_1:6621554-6621573 | Msa1175300:CDS | 45.0% | |
| CTGTCACAGATCTGCTTTAG+AGG | + | chr8_1:6621577-6621596 | Msa1175300:CDS | 45.0% | |
| AGATTCTGATGATCCCATGG+GGG | + | chr8_1:6621622-6621641 | Msa1175300:CDS | 45.0% | |
| ATGCAGAAAATAGCCCCCAT+GGG | - | chr8_1:6621638-6621657 | None:intergenic | 45.0% | |
| AATGCAGAAAATAGCCCCCA+TGG | - | chr8_1:6621639-6621658 | None:intergenic | 45.0% | |
| GGTAAAACCGACAAATGGCA+AGG | - | chr8_1:6621766-6621785 | None:intergenic | 45.0% | |
| ATCAACACAAGCATCTTCGG+AGG | - | chr8_1:6621801-6621820 | None:intergenic | 45.0% | |
| GTCCATGCACGATCTTTCAA+TGG | - | chr8_1:6621908-6621927 | None:intergenic | 45.0% | |
| !! | TGGTGCTGCAAAACAAGTCA+TGG | + | chr8_1:6622057-6622076 | Msa1175300:CDS | 45.0% |
| TGGGATTGCCGTTACTGAAT+CGG | - | chr8_1:6622473-6622492 | None:intergenic | 45.0% | |
| TATTTGAGTCGATGCTACCG+TGG | + | chr8_1:6622626-6622645 | Msa1175300:CDS | 45.0% | |
| ATTTGAGTCGATGCTACCGT+GGG | + | chr8_1:6622627-6622646 | Msa1175300:CDS | 45.0% | |
| CCTTCCTCATAAGTAACCCA+CGG | - | chr8_1:6622646-6622665 | None:intergenic | 45.0% | |
| TGGGTTACTTATGAGGAAGG+TGG | + | chr8_1:6622646-6622665 | Msa1175300:CDS | 45.0% | |
| !! | TCACCAGGTTGGTTAACATC+AGG | - | chr8_1:6622673-6622692 | None:intergenic | 45.0% |
| GATGTTAACCAACCTGGTGA+CGG | + | chr8_1:6622673-6622692 | Msa1175300:CDS | 45.0% | |
| !! | AAAAGGCTTCTAGAGCAGGA+AGG | - | chr8_1:6622735-6622754 | None:intergenic | 45.0% |
| TCATGGAGTTCAACACACTC+CGG | - | chr8_1:6622761-6622780 | None:intergenic | 45.0% | |
| ! | CATGACTAACAGCGCTGAAA+AGG | - | chr8_1:6622969-6622988 | None:intergenic | 45.0% |
| TATGGTAACAACTCCCTGAG+AGG | + | chr8_1:6623012-6623031 | Msa1175300:three_prime_UTR | 45.0% | |
| CAAAACGATGTCGGGTCGAT+TGG | + | chr8_1:6618131-6618150 | Msa1175300:exon | 50.0% | |
| ATTGCAGGGAGATGAGTCTG+CGG | + | chr8_1:6619294-6619313 | Msa1175300:intron | 50.0% | |
| TGAGTCTGCGGATGAAACGT+CGG | + | chr8_1:6619306-6619325 | Msa1175300:CDS | 50.0% | |
| CCAGACATGCATACAGAGAG+GGG | - | chr8_1:6619926-6619945 | None:intergenic | 50.0% | |
| ! | AGGGTGAAGATAGTGGTGAC+TGG | - | chr8_1:6620413-6620432 | None:intergenic | 50.0% |
| AGAGTGGGATTGGGAGACAT+AGG | + | chr8_1:6621028-6621047 | Msa1175300:intron | 50.0% | |
| GAGTGGGATTGGGAGACATA+GGG | + | chr8_1:6621029-6621048 | Msa1175300:intron | 50.0% | |
| GTGGGTGAACAACAGATGTC+TGG | + | chr8_1:6621398-6621417 | Msa1175300:CDS | 50.0% | |
| CTACTTTGCTCTACGGTCTG+AGG | + | chr8_1:6621661-6621680 | Msa1175300:CDS | 50.0% | |
| ! | TACGGTCTGAGGAGTATGCA+TGG | + | chr8_1:6621672-6621691 | Msa1175300:CDS | 50.0% |
| TTTATGGGCATTCCAAGGGC+AGG | + | chr8_1:6622511-6622530 | Msa1175300:CDS | 50.0% | |
| TTATGGGCATTCCAAGGGCA+GGG | + | chr8_1:6622512-6622531 | Msa1175300:CDS | 50.0% | |
| ! | GCTACCGTGGGTTACTTATG+AGG | + | chr8_1:6622639-6622658 | Msa1175300:CDS | 50.0% |
| ! | CCGTGGGTTACTTATGAGGA+AGG | + | chr8_1:6622643-6622662 | Msa1175300:CDS | 50.0% |
| GGACCTGATGTTAACCAACC+TGG | + | chr8_1:6622667-6622686 | Msa1175300:CDS | 50.0% | |
| AGCAAATCCAAGCCGTCCCA+TGG | + | chr8_1:6618804-6618823 | Msa1175300:intron | 55.0% | |
| TATAACGCCATGGGACGGCT+TGG | - | chr8_1:6618814-6618833 | None:intergenic | 55.0% | |
| CGCATCTGCCTAGAACTGCT+TGG | - | chr8_1:6619706-6619725 | None:intergenic | 55.0% | |
| !! | AGCAGTTCTAGGCAGATGCG+AGG | + | chr8_1:6619706-6619725 | Msa1175300:CDS | 55.0% |
| !! | GCAGTTCTAGGCAGATGCGA+GGG | + | chr8_1:6619707-6619726 | Msa1175300:CDS | 55.0% |
| !! | CAGTTCTAGGCAGATGCGAG+GGG | + | chr8_1:6619708-6619727 | Msa1175300:CDS | 55.0% |
| CATGGGAGCCAAGTGTTTGC+TGG | - | chr8_1:6619778-6619797 | None:intergenic | 55.0% | |
| CCCCTCTCTGTATGCATGTC+TGG | + | chr8_1:6619923-6619942 | Msa1175300:intron | 55.0% | |
| ! | GTCTGAGGAGTATGCATGGC+TGG | + | chr8_1:6621676-6621695 | Msa1175300:CDS | 55.0% |
| TATGGGCATTCCAAGGGCAG+GGG | + | chr8_1:6622513-6622532 | Msa1175300:CDS | 55.0% | |
| TTGCAACACCACGAGGAGCA+TGG | - | chr8_1:6622585-6622604 | None:intergenic | 55.0% | |
| TTATCTTGCTCGCCGTCACC+AGG | - | chr8_1:6622688-6622707 | None:intergenic | 55.0% | |
| TCCCACATTCACGCCACTGC+AGG | + | chr8_1:6621466-6621485 | Msa1175300:CDS | 60.0% | |
| CCCTGCAGTGGCGTGAATGT+GGG | - | chr8_1:6621470-6621489 | None:intergenic | 60.0% | |
| CCCACATTCACGCCACTGCA+GGG | + | chr8_1:6621467-6621486 | Msa1175300:CDS | 60.0% | |
| ACCCTGCAGTGGCGTGAATG+TGG | - | chr8_1:6621471-6621490 | None:intergenic | 60.0% | |
| TGTGACAGCCTCGTCGATCC+AGG | - | chr8_1:6621565-6621584 | None:intergenic | 60.0% | |
| GAGCATGGCCATTGCCTTGC+TGG | - | chr8_1:6622570-6622589 | None:intergenic | 60.0% | |
| CTAGGCAGATGCGAGGGGTG+AGG | + | chr8_1:6619713-6619732 | Msa1175300:CDS | 65.0% | |
| AGCATAGCCTCCCCTGCCCT+TGG | - | chr8_1:6622526-6622545 | None:intergenic | 65.0% | |
| AAGGGCAGGGGAGGCTATGC+TGG | + | chr8_1:6622525-6622544 | Msa1175300:CDS | 65.0% | |
| GGCAATGGCCATGCTCCTCG+TGG | + | chr8_1:6622574-6622593 | Msa1175300:CDS | 65.0% | |
| CTTGCTCGCCGTCACCAGGT+TGG | - | chr8_1:6622684-6622703 | None:intergenic | 65.0% | |
| CTTCGGAGGCTGCGCGCTCA+AGG | - | chr8_1:6621787-6621806 | None:intergenic | 70.0% | |
| GGGCATTCCAAGGGCAGGGG+AGG | + | chr8_1:6622516-6622535 | Msa1175300:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 6618106 | 6623065 | 6618106 | ID=Msa1175300;Name=Msa1175300 |
| chr8_1 | mRNA | 6618106 | 6623065 | 6618106 | ID=Msa1175300-mRNA-1;Parent=Msa1175300;Name=Msa1175300-mRNA-1;_AED=0.01;_eAED=0.01;_QI=32|1|1|1|1|1|4|351|637 |
| chr8_1 | exon | 6618106 | 6618314 | 6618106 | ID=Msa1175300-mRNA-1:exon:2339;Parent=Msa1175300-mRNA-1 |
| chr8_1 | exon | 6619301 | 6619854 | 6619301 | ID=Msa1175300-mRNA-1:exon:2340;Parent=Msa1175300-mRNA-1 |
| chr8_1 | exon | 6621250 | 6622158 | 6621250 | ID=Msa1175300-mRNA-1:exon:2341;Parent=Msa1175300-mRNA-1 |
| chr8_1 | exon | 6622441 | 6623065 | 6622441 | ID=Msa1175300-mRNA-1:exon:2342;Parent=Msa1175300-mRNA-1 |
| chr8_1 | five_prime_UTR | 6618106 | 6618137 | 6618106 | ID=Msa1175300-mRNA-1:five_prime_utr;Parent=Msa1175300-mRNA-1 |
| chr8_1 | CDS | 6618138 | 6618314 | 6618138 | ID=Msa1175300-mRNA-1:cds;Parent=Msa1175300-mRNA-1 |
| chr8_1 | CDS | 6619301 | 6619854 | 6619301 | ID=Msa1175300-mRNA-1:cds;Parent=Msa1175300-mRNA-1 |
| chr8_1 | CDS | 6621250 | 6622158 | 6621250 | ID=Msa1175300-mRNA-1:cds;Parent=Msa1175300-mRNA-1 |
| chr8_1 | CDS | 6622441 | 6622714 | 6622441 | ID=Msa1175300-mRNA-1:cds;Parent=Msa1175300-mRNA-1 |
| chr8_1 | three_prime_UTR | 6622715 | 6623065 | 6622715 | ID=Msa1175300-mRNA-1:three_prime_utr;Parent=Msa1175300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
