Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0248460 | XP_003595491.1 | 94.144 | 666 | 31 | 2 | 1 | 664 | 1 | 660 | 0.0 | 1238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0248460 | sp|Q9FGT1|ROS3_ARATH | 49.356 | 233 | 88 | 5 | 3 | 233 | 2 | 206 | 6.66e-60 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0248460 | A2Q361 | 94.144 | 666 | 31 | 2 | 1 | 664 | 1 | 660 | 0.0 | 1238 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0077010 | Msa0248460 | 0.808089 | 3.675703e-50 | -8.615850e-47 |
| Msa0126840 | Msa0248460 | 0.811657 | 6.274123e-51 | -8.615850e-47 |
| Msa0127040 | Msa0248460 | 0.805870 | 1.083417e-49 | -8.615850e-47 |
| Msa0142110 | Msa0248460 | 0.878125 | 3.616633e-69 | -8.615850e-47 |
| Msa0167480 | Msa0248460 | 0.804471 | 2.126656e-49 | -8.615850e-47 |
| Msa0171850 | Msa0248460 | 0.810070 | 1.383688e-50 | -8.615850e-47 |
| Msa0221030 | Msa0248460 | 0.803279 | 3.760414e-49 | -8.615850e-47 |
| Msa0248460 | Msa0262480 | 0.804837 | 1.783234e-49 | -8.615850e-47 |
| Msa0248460 | Msa0291520 | 0.807177 | 5.740848e-50 | -8.615850e-47 |
| Msa0248460 | Msa0300350 | 0.831064 | 2.062849e-55 | -8.615850e-47 |
| Msa0248460 | Msa0383130 | 0.806409 | 8.342985e-50 | -8.615850e-47 |
| Msa0248460 | Msa0436200 | 0.803178 | 3.945403e-49 | -8.615850e-47 |
| Msa0248460 | Msa0443390 | 0.800929 | 1.144376e-48 | -8.615850e-47 |
| Msa0248460 | Msa0474700 | 0.835997 | 1.211018e-56 | -8.615850e-47 |
| Msa0248460 | Msa0478580 | 0.809960 | 1.461222e-50 | -8.615850e-47 |
| Msa0248460 | Msa0550570 | 0.817827 | 2.694893e-52 | -8.615850e-47 |
| Msa0248460 | Msa0593700 | 0.811725 | 6.064005e-51 | -8.615850e-47 |
| Msa0248460 | Msa0618930 | 0.824181 | 9.274565e-54 | -8.615850e-47 |
| Msa0248460 | Msa0619860 | 0.805663 | 1.197243e-49 | -8.615850e-47 |
| Msa0248460 | Msa0633570 | 0.803913 | 2.778614e-49 | -8.615850e-47 |
| Msa0248460 | Msa0656810 | 0.877738 | 4.937942e-69 | -8.615850e-47 |
| Msa0248460 | Msa0687230 | 0.806729 | 7.141845e-50 | -8.615850e-47 |
| Msa0248460 | Msa0694990 | 0.805008 | 1.642121e-49 | -8.615850e-47 |
| Msa0248460 | Msa0720030 | 0.814461 | 1.522335e-51 | -8.615850e-47 |
| Msa0248460 | Msa0744100 | 0.807557 | 4.767945e-50 | -8.615850e-47 |
| Msa0248460 | Msa0825270 | 0.827378 | 1.617519e-54 | -8.615850e-47 |
| Msa0248460 | Msa0826510 | 0.814677 | 1.363826e-51 | -8.615850e-47 |
| Msa0248460 | Msa0839200 | 0.817451 | 3.275566e-52 | -8.615850e-47 |
| Msa0248460 | Msa0865620 | 0.804260 | 2.352446e-49 | -8.615850e-47 |
| Msa0248460 | Msa0913240 | 0.821686 | 3.538334e-53 | -8.615850e-47 |
| Msa0248460 | Msa0943170 | 0.818982 | 1.475024e-52 | -8.615850e-47 |
| Msa0248460 | Msa0963020 | 0.829588 | 4.734262e-55 | -8.615850e-47 |
| Msa0248460 | Msa0981430 | 0.834978 | 2.191735e-56 | -8.615850e-47 |
| Msa0248460 | Msa1017510 | 0.800771 | 1.232514e-48 | -8.615850e-47 |
| Msa0248460 | Msa1126850 | 0.803562 | 3.285320e-49 | -8.615850e-47 |
| Msa0248460 | Msa1166870 | 0.817033 | 4.066314e-52 | -8.615850e-47 |
| Msa0248460 | Msa1175300 | 0.809696 | 1.665451e-50 | -8.615850e-47 |
| Msa0248460 | Msa1179980 | 0.818326 | 2.077936e-52 | -8.615850e-47 |
| Msa0248460 | Msa1235530 | 0.822419 | 2.392884e-53 | -8.615850e-47 |
| Msa0248460 | Msa1270620 | 0.826373 | 2.811978e-54 | -8.615850e-47 |
| Msa0248460 | Msa1270690 | 0.815920 | 7.218159e-52 | -8.615850e-47 |
| Msa0248460 | Msa1276970 | 0.809330 | 1.996306e-50 | -8.615850e-47 |
| Msa0248460 | Msa1306990 | 0.803005 | 4.285869e-49 | -8.615850e-47 |
| Msa0248460 | Msa1329300 | 0.806967 | 6.359722e-50 | -8.615850e-47 |
| Msa0248460 | Msa1331710 | 0.806638 | 7.464088e-50 | -8.615850e-47 |
| Msa0248460 | Msa1358430 | 0.806503 | 7.968934e-50 | -8.615850e-47 |
| Msa0248460 | Msa1397940 | 0.801537 | 8.594501e-49 | -8.615850e-47 |
| Msa0248460 | Msa1459910 | 0.800059 | 1.721523e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0248460 | MtrunA17_Chr2g0303511 | 94.144 | 666 | 31 | 2 | 1 | 664 | 1 | 660 | 0.0 | 1238 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0248460 | AT5G58130.1 | 49.356 | 233 | 88 | 5 | 3 | 233 | 2 | 206 | 6.77e-61 | 217 |
Find 161 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGATCCTTTCAAGTTCT+TGG | 0.115429 | 2_2:+32499855 | None:intergenic |
| ACTGAACCAGAACATGATTT+TGG | 0.178047 | 2_2:-32499014 | Msa0248460:CDS |
| GGTTCTTTAGCCGTTTGTTC+TGG | 0.189946 | 2_2:+32498456 | None:intergenic |
| GAGGACCAACTTTAATATTC+TGG | 0.211960 | 2_2:+32500239 | None:intergenic |
| GGCTATTACATAAAATTAAT+TGG | 0.215334 | 2_2:+32497983 | None:intergenic |
| TTCAGTTATCACTTGTTTAT+TGG | 0.243733 | 2_2:+32498620 | None:intergenic |
| TTGTAGTACATGTCCGTTCC+TGG | 0.267022 | 2_2:-32497921 | Msa0248460:three_prime_UTR |
| AGAATATTCGTCGGAGGATT+AGG | 0.284833 | 2_2:-32503198 | Msa0248460:CDS |
| TCGAAAACTGTTCGAATCAT+TGG | 0.286085 | 2_2:-32503151 | Msa0248460:CDS |
| ATTGCTTTCACTTTCCGATT+TGG | 0.294913 | 2_2:+32499115 | None:intergenic |
| CATGATCCTTTCAAGTTCTT+GGG | 0.298802 | 2_2:+32499856 | None:intergenic |
| TTGCTTTCACTTTCCGATTT+GGG | 0.304504 | 2_2:+32499116 | None:intergenic |
| TGAGGCTTCATTAAGGAATC+TGG | 0.311029 | 2_2:+32497883 | None:intergenic |
| TTCGACTCATAAGGAGGATT+TGG | 0.331025 | 2_2:-32502062 | Msa0248460:CDS |
| CGATCTGCAAATGTTGAAAT+AGG | 0.332142 | 2_2:-32498246 | Msa0248460:CDS |
| GTCCGTTCCTGGGCAAGTTT+TGG | 0.332853 | 2_2:-32497910 | Msa0248460:three_prime_UTR |
| ATGTTGGCATTGCAGTATAA+TGG | 0.333790 | 2_2:-32502205 | Msa0248460:intron |
| GTCACGGATGGCTTCAACTT+AGG | 0.337028 | 2_2:-32498363 | Msa0248460:CDS |
| GGAACCGGCAGGGTACAAAA+TGG | 0.340357 | 2_2:+32498434 | None:intergenic |
| TGGTACCTTACTGAAAAGTT+TGG | 0.345165 | 2_2:+32503044 | None:intergenic |
| TAACGAACCGTTCTTAATCT+TGG | 0.345426 | 2_2:+32501974 | None:intergenic |
| CTTCTAGATGGGCTGGGATC+TGG | 0.347707 | 2_2:-32499047 | Msa0248460:CDS |
| GACCACATGAGGCTTCATTA+AGG | 0.354902 | 2_2:+32497876 | None:intergenic |
| CATGGTGGCAAAAGAAATCT+TGG | 0.355436 | 2_2:-32498545 | Msa0248460:CDS |
| TCTACAAAGCGTCTTGCATT+AGG | 0.359623 | 2_2:+32502028 | None:intergenic |
| TCGAATGTCATCGGTGGTTA+CGG | 0.365656 | 2_2:+32503170 | None:intergenic |
| GGGAGTCTGCCAAAGTTTCA+TGG | 0.367925 | 2_2:-32498992 | Msa0248460:CDS |
| AAAAGCTGTGAAAGGCTAAA+TGG | 0.376894 | 2_2:+32498495 | None:intergenic |
| ACGATCAAGGTAATGCTCTT+TGG | 0.378575 | 2_2:+32502144 | None:intergenic |
| CAGATCCCAGCCCATCTAGA+AGG | 0.381344 | 2_2:+32499048 | None:intergenic |
| ATGAGTGGGGAAGCAGAAAT+TGG | 0.383018 | 2_2:-32500115 | Msa0248460:CDS |
| CTCTTCTATCACTCTTGTAT+TGG | 0.388942 | 2_2:+32498704 | None:intergenic |
| ATATTGAGAGGCTTTGCATC+TGG | 0.390081 | 2_2:+32502004 | None:intergenic |
| AAAGCTAAAGCTGCTGTTAG+TGG | 0.395152 | 2_2:-32498174 | Msa0248460:CDS |
| TGTTATTCTCATTAGCCAAC+TGG | 0.398795 | 2_2:+32498520 | None:intergenic |
| TTCTTTGATCATTTGTGTAT+TGG | 0.401907 | 2_2:+32498746 | None:intergenic |
| AGGATAAGTTATCTATGAAT+GGG | 0.402189 | 2_2:-32500162 | Msa0248460:CDS |
| GTTCTTTAGCCGTTTGTTCT+GGG | 0.404623 | 2_2:+32498457 | None:intergenic |
| AAAATGCAGACCCTTCTAGA+TGG | 0.405551 | 2_2:-32499059 | Msa0248460:CDS |
| GTTTCTAACACCAAGCATCT+TGG | 0.410072 | 2_2:-32500025 | Msa0248460:CDS |
| GAGAAAATCACTTCCCAAAT+CGG | 0.411171 | 2_2:-32499129 | Msa0248460:CDS |
| TCACGGATGGCTTCAACTTA+GGG | 0.412683 | 2_2:-32498362 | Msa0248460:CDS |
| TCCATACCCTTCAGTGGAAC+TGG | 0.413684 | 2_2:-32500280 | Msa0248460:CDS |
| GACTCCCCAAAATCATGTTC+TGG | 0.414624 | 2_2:+32499008 | None:intergenic |
| AAGGATAAGTTATCTATGAA+TGG | 0.419930 | 2_2:-32500163 | Msa0248460:CDS |
| ACAATCCTGCTTCTGCTGTA+TGG | 0.419940 | 2_2:+32498105 | None:intergenic |
| AACGAACCGTTCTTAATCTT+GGG | 0.421343 | 2_2:+32501975 | None:intergenic |
| CGAAAACTGTTCGAATCATT+GGG | 0.426176 | 2_2:-32503150 | Msa0248460:CDS |
| AAACGCAGTGAGAAGAAGTA+AGG | 0.432186 | 2_2:-32498138 | Msa0248460:exon |
| TGTTGGCATTGCAGTATAAT+GGG | 0.433137 | 2_2:-32502204 | Msa0248460:intron |
| GTTATCACTTGTTTATTGGT+AGG | 0.438837 | 2_2:+32498624 | None:intergenic |
| TCCAGTGAGTGCAAGCATAA+TGG | 0.439320 | 2_2:-32498414 | Msa0248460:CDS |
| TCTATCACTCTTGTATTGGT+AGG | 0.441895 | 2_2:+32498708 | None:intergenic |
| CTTCTGAGACCATGAAACTT+TGG | 0.442387 | 2_2:+32498983 | None:intergenic |
| ACACTAGGTGTAATGTTATG+AGG | 0.445559 | 2_2:-32498016 | Msa0248460:three_prime_UTR |
| GCAGACCCTTCTAGATGGGC+TGG | 0.447267 | 2_2:-32499054 | Msa0248460:CDS |
| ATGCTTGCACTCACTGGAAC+CGG | 0.452300 | 2_2:+32498419 | None:intergenic |
| AATCGGAAAGTGAAAGCAAT+GGG | 0.455057 | 2_2:-32499112 | Msa0248460:CDS |
| TTCTTCTATCACCTGTGCAT+TGG | 0.455540 | 2_2:+32498662 | None:intergenic |
| TGAAAGGATCATGGAAAGTC+AGG | 0.458480 | 2_2:-32499846 | Msa0248460:intron |
| GTAAGCGAGACTGCGACCTT+TGG | 0.460541 | 2_2:+32503098 | None:intergenic |
| GCTGATAAGAATACTATTGA+TGG | 0.461820 | 2_2:-32498390 | Msa0248460:CDS |
| TTCTGATGTTTCGACTCATA+AGG | 0.462618 | 2_2:-32502071 | Msa0248460:CDS |
| GGTCTTTGCTGTTATACACT+AGG | 0.466301 | 2_2:-32498031 | Msa0248460:three_prime_UTR |
| TACATAAAATTAATTGGTGA+TGG | 0.468530 | 2_2:+32497989 | None:intergenic |
| TAACTGGCACAGGTGTTTCA+TGG | 0.468662 | 2_2:-32498563 | Msa0248460:CDS |
| CTTACTGAAAAGTTTGGAAA+GGG | 0.474134 | 2_2:+32503050 | None:intergenic |
| TTGGTAGGTTGAGCTTCAGC+AGG | 0.477986 | 2_2:+32498639 | None:intergenic |
| ACCATTATGCTTGCACTCAC+TGG | 0.478496 | 2_2:+32498413 | None:intergenic |
| GTGCTTCTTTCCAAGATGCT+TGG | 0.478695 | 2_2:+32500015 | None:intergenic |
| ACATTTGCAGATCGTTCCCT+TGG | 0.482594 | 2_2:+32498255 | None:intergenic |
| CCAGCATGCTCACTATGTTC+TGG | 0.483255 | 2_2:+32498330 | None:intergenic |
| TGTATTGGTAGGTTGAGATT+CGG | 0.494596 | 2_2:+32498761 | None:intergenic |
| AAGTTATGCTGAGTTTCAGC+AGG | 0.496289 | 2_2:+32498597 | None:intergenic |
| TAGAATCAGCAAGGAAATCA+AGG | 0.497334 | 2_2:+32503076 | None:intergenic |
| TATGAATGGGGAAACTGAAA+GGG | 0.498569 | 2_2:-32500149 | Msa0248460:CDS |
| CTATGAATGGGGAAACTGAA+AGG | 0.499445 | 2_2:-32500150 | Msa0248460:CDS |
| CATTAGTTTCCCAGAACAAA+CGG | 0.500069 | 2_2:-32498466 | Msa0248460:CDS |
| AGTTTCATCGTTTGTAGAAG+AGG | 0.502622 | 2_2:+32498845 | None:intergenic |
| TGGAGAGAACTTGTTGGTAA+AGG | 0.503479 | 2_2:-32498954 | Msa0248460:CDS |
| AAACAAACAGCTTGCAAGCA+TGG | 0.503699 | 2_2:-32503250 | Msa0248460:exon |
| AATTTCCATACAGCAGAAGC+AGG | 0.504113 | 2_2:-32498110 | Msa0248460:three_prime_UTR |
| TAAAACAAATATTGCGGAGG+AGG | 0.509192 | 2_2:-32499204 | Msa0248460:CDS |
| ACCAGTTCCACTGAAGGGTA+TGG | 0.509579 | 2_2:+32500279 | None:intergenic |
| GAACCGGCAGGGTACAAAAT+GGG | 0.513709 | 2_2:+32498435 | None:intergenic |
| TTGATCATTTGTGTATTGGT+AGG | 0.513749 | 2_2:+32498750 | None:intergenic |
| TCTATCACCTGTGCATTGGT+AGG | 0.514259 | 2_2:+32498666 | None:intergenic |
| GTGCTGATTCTTTGAAAGAG+TGG | 0.514505 | 2_2:-32498200 | Msa0248460:CDS |
| AGTTTCCAGAATATTAAAGT+TGG | 0.515602 | 2_2:-32500244 | Msa0248460:CDS |
| CCAAGAACTTGAAAGGATCA+TGG | 0.517434 | 2_2:-32499855 | Msa0248460:CDS |
| TGACTTCAACAGGCATAAGT+TGG | 0.519102 | 2_2:-32498052 | Msa0248460:three_prime_UTR |
| AATGGGTGTGTGTGGAAAGG+TGG | 0.524128 | 2_2:-32502187 | Msa0248460:CDS |
| TGTAGTACATGTCCGTTCCT+GGG | 0.524965 | 2_2:-32497920 | Msa0248460:three_prime_UTR |
| TGGAAAGCTGAAACTTGAAA+AGG | 0.537493 | 2_2:-32502167 | Msa0248460:CDS |
| CAGACCCTTCTAGATGGGCT+GGG | 0.539526 | 2_2:-32499053 | Msa0248460:CDS |
| TCTTCGTGGAGAGAACTTGT+TGG | 0.539823 | 2_2:-32498960 | Msa0248460:CDS |
| TTGCACTCACTGGAACCGGC+AGG | 0.540369 | 2_2:+32498423 | None:intergenic |
| TGCTTACCAGTTCCACTGAA+GGG | 0.542059 | 2_2:+32500274 | None:intergenic |
| GGGAAAAGTTATCTATGAGT+GGG | 0.542933 | 2_2:-32500129 | Msa0248460:CDS |
| AAATCATGTTCTGGTTCAGT+AGG | 0.544746 | 2_2:+32499017 | None:intergenic |
| TCATAAGGAGGATTTGGTAA+AGG | 0.545638 | 2_2:-32502056 | Msa0248460:CDS |
| ACTGCGACCTTTGGTACGAA+TGG | 0.551310 | 2_2:+32503107 | None:intergenic |
| CCTTACTGAAAAGTTTGGAA+AGG | 0.551504 | 2_2:+32503049 | None:intergenic |
| CATGGTCTCAGAAGTCTTCG+TGG | 0.551938 | 2_2:-32498974 | Msa0248460:CDS |
| ATCTCTGCCTACCAATGCAC+AGG | 0.554099 | 2_2:-32498673 | Msa0248460:CDS |
| TGTTCTGGGAAACTAATGTC+AGG | 0.556549 | 2_2:+32498471 | None:intergenic |
| AGTGGGGAAGCAGAAATTGG+TGG | 0.558375 | 2_2:-32500112 | Msa0248460:CDS |
| ATTCTATTGTTGACCACATG+AGG | 0.559342 | 2_2:+32497865 | None:intergenic |
| TTGGTAGGTTGAGATTCGGC+AGG | 0.560339 | 2_2:+32498765 | None:intergenic |
| TACCAAAACTTGCCCAGGAA+CGG | 0.564314 | 2_2:+32497908 | None:intergenic |
| GAAGATCAGCAAAACTCTCA+TGG | 0.564997 | 2_2:-32498879 | Msa0248460:CDS |
| CAGGGACCCAAGAACTTGAA+AGG | 0.565422 | 2_2:-32499862 | Msa0248460:CDS |
| GTGCTTACCAGTTCCACTGA+AGG | 0.566725 | 2_2:+32500273 | None:intergenic |
| AAATGCAGACCCTTCTAGAT+GGG | 0.570793 | 2_2:-32499058 | Msa0248460:CDS |
| GTTATTCTCATTAGCCAACT+GGG | 0.572106 | 2_2:+32498521 | None:intergenic |
| AAATCGTTGAAACAAGTCCA+AGG | 0.574551 | 2_2:-32498272 | Msa0248460:CDS |
| TGGATTACCAAAACTTGCCC+AGG | 0.576940 | 2_2:+32497903 | None:intergenic |
| AACGCAGTGAGAAGAAGTAA+GGG | 0.581748 | 2_2:-32498137 | Msa0248460:exon |
| CTTGGGAAGTAAATATTGAG+AGG | 0.582694 | 2_2:+32501992 | None:intergenic |
| TGAGTCGAAACATCAGAAGC+TGG | 0.586957 | 2_2:+32502076 | None:intergenic |
| TACTATTGATGGAACTGTCA+CGG | 0.590070 | 2_2:-32498379 | Msa0248460:CDS |
| AGGGAAAAGTTATCTATGAG+TGG | 0.590439 | 2_2:-32500130 | Msa0248460:CDS |
| TGCAGTATAATGGGTGTGTG+TGG | 0.590559 | 2_2:-32502195 | Msa0248460:intron |
| TGCACTCACTGGAACCGGCA+GGG | 0.590957 | 2_2:+32498424 | None:intergenic |
| TTACTTCCCAAGATTAAGAA+CGG | 0.593171 | 2_2:-32501981 | Msa0248460:intron |
| AAACGATGAAACTGAAGACA+TGG | 0.593297 | 2_2:-32498835 | Msa0248460:CDS |
| CTCGAAACCATTCGTACCAA+AGG | 0.593811 | 2_2:-32503114 | Msa0248460:CDS |
| AGATCCCAGCCCATCTAGAA+GGG | 0.593994 | 2_2:+32499049 | None:intergenic |
| GTACTACAATAAATAAAATG+AGG | 0.594189 | 2_2:+32497935 | None:intergenic |
| AAAGAAATCTTGGACCCAGT+TGG | 0.595933 | 2_2:-32498535 | Msa0248460:CDS |
| GTCCAATAAAACAAATATTG+CGG | 0.596702 | 2_2:-32499210 | Msa0248460:CDS |
| TGTCAGGCAAAAGCTGTGAA+AGG | 0.600136 | 2_2:+32498487 | None:intergenic |
| TGGAGCAGAAACTATATCAT+CGG | 0.601162 | 2_2:+32498305 | None:intergenic |
| TTGGTAGGCAGAGATTCAGC+AGG | 0.605263 | 2_2:+32498681 | None:intergenic |
| AGAGAACTTGTTGGTAAAGG+AGG | 0.605841 | 2_2:-32498951 | Msa0248460:CDS |
| GAGCAAGAGCGATTCTAGCA+AGG | 0.611834 | 2_2:-32499159 | Msa0248460:CDS |
| CACGGATGGCTTCAACTTAG+GGG | 0.616972 | 2_2:-32498361 | Msa0248460:CDS |
| AGAGCAGTGAGAATATTCGT+CGG | 0.618455 | 2_2:-32503207 | Msa0248460:CDS |
| AAATCGGAAAGTGAAAGCAA+TGG | 0.618747 | 2_2:-32499113 | Msa0248460:CDS |
| GTAGATAGTGCAACAGATGA+TGG | 0.626664 | 2_2:-32499947 | Msa0248460:CDS |
| GGATAAGTTATCTATGAATG+GGG | 0.627287 | 2_2:-32500161 | Msa0248460:CDS |
| ATTGATGGAACTGTCACGGA+TGG | 0.628129 | 2_2:-32498375 | Msa0248460:CDS |
| TGATGTTTCGACTCATAAGG+AGG | 0.628597 | 2_2:-32502068 | Msa0248460:CDS |
| TCTTCAGCAGTATCAAACTT+CGG | 0.628677 | 2_2:+32498897 | None:intergenic |
| AAAGGGATTTAGAATCAGCA+AGG | 0.632981 | 2_2:+32503067 | None:intergenic |
| AAAACAAAGCAGCTTTGACA+GGG | 0.636062 | 2_2:-32499880 | Msa0248460:CDS |
| AATCGTTGAAACAAGTCCAA+GGG | 0.636458 | 2_2:-32498271 | Msa0248460:CDS |
| TATAATGGGTGTGTGTGGAA+AGG | 0.637628 | 2_2:-32502190 | Msa0248460:CDS |
| GTTAAATCCATACCCTTCAG+TGG | 0.639356 | 2_2:-32500286 | Msa0248460:CDS |
| TTCCTTAATGAAGCCTCATG+TGG | 0.644921 | 2_2:-32497878 | Msa0248460:three_prime_UTR |
| GGAAAAGTTATCTATGAGTG+GGG | 0.649648 | 2_2:-32500128 | Msa0248460:CDS |
| CAATAAAACAAATATTGCGG+AGG | 0.654109 | 2_2:-32499207 | Msa0248460:CDS |
| CCAGAACATAGTGAGCATGC+TGG | 0.659717 | 2_2:-32498330 | Msa0248460:CDS |
| GTTGCGTCTAGTACCCCTGT+AGG | 0.660935 | 2_2:-32499089 | Msa0248460:CDS |
| AAACTTCGGCAATATGAGAG+AGG | 0.671206 | 2_2:+32498911 | None:intergenic |
| GCAGTGAGAATATTCGTCGG+AGG | 0.687502 | 2_2:-32503204 | Msa0248460:CDS |
| CTGGCACAGGTGTTTCATGG+TGG | 0.696551 | 2_2:-32498560 | Msa0248460:CDS |
| GTCGAAACATCAGAAGCTGG+TGG | 0.697024 | 2_2:+32502079 | None:intergenic |
| CAAACAGCTTGCAAGCATGG+AGG | 0.703630 | 2_2:-32503247 | Msa0248460:exon |
| TAGAATTGATGAAAACCACA+TGG | 0.725385 | 2_2:+32497962 | None:intergenic |
| ATCGGAAAGTGAAAGCAATG+GGG | 0.734526 | 2_2:-32499111 | Msa0248460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATAATAAAAATGTGA+CGG | + | chr2_2:32498372-32498391 | None:intergenic | 10.0% |
| !! | AGAAAATAGAATTAATTTAA+GGG | + | chr2_2:32498833-32498852 | None:intergenic | 10.0% |
| !! | AAGAAAATAGAATTAATTTA+AGG | + | chr2_2:32498834-32498853 | None:intergenic | 10.0% |
| !! | TTTAAAAGTAATGATTATGT+TGG | - | chr2_2:32498865-32498884 | Msa0248460:CDS | 15.0% |
| !! | AAATAAATAAATGAGTAAAC+AGG | + | chr2_2:32499147-32499166 | None:intergenic | 15.0% |
| !!! | ATTTATTTTGTTATTCGTTA+CGG | + | chr2_2:32499861-32499880 | None:intergenic | 15.0% |
| !! | AATAAATTTACTTAATCTGA+AGG | - | chr2_2:32499874-32499893 | Msa0248460:CDS | 15.0% |
| !! | ATAAATTTACTTAATCTGAA+GGG | - | chr2_2:32499875-32499894 | Msa0248460:CDS | 15.0% |
| !!! | TTTTTTTCTCAACAAATTAA+GGG | + | chr2_2:32500369-32500388 | None:intergenic | 15.0% |
| !!! | ATTTTTTTCTCAACAAATTA+AGG | + | chr2_2:32500370-32500389 | None:intergenic | 15.0% |
| !! | AAATCTGTATAATTAAACAA+TGG | + | chr2_2:32500702-32500721 | None:intergenic | 15.0% |
| !!! | CGTATCATTTATTTTTTATT+TGG | - | chr2_2:32501270-32501289 | Msa0248460:intron | 15.0% |
| !!! | TCATTTATTTTTTATTTGGA+AGG | - | chr2_2:32501274-32501293 | Msa0248460:intron | 15.0% |
| !!! | CATTTATTTTTTATTTGGAA+GGG | - | chr2_2:32501275-32501294 | Msa0248460:intron | 15.0% |
| !!! | GTTCAAATAAATATAGTTTT+AGG | - | chr2_2:32501561-32501580 | Msa0248460:intron | 15.0% |
| !! | TAGAATTAATTTAAGGGTTT+AGG | + | chr2_2:32498827-32498846 | None:intergenic | 20.0% |
| !!! | TTTATTGTTTTTGCTATTTG+TGG | - | chr2_2:32499187-32499206 | Msa0248460:CDS | 20.0% |
| !! | TGTTAACTTAATCAAAATCA+AGG | + | chr2_2:32499608-32499627 | None:intergenic | 20.0% |
| !! | GTACACAAAATTTAGAAAAT+AGG | - | chr2_2:32499650-32499669 | Msa0248460:intron | 20.0% |
| !! | CAAAATTTAGAAAATAGGAA+AGG | - | chr2_2:32499655-32499674 | Msa0248460:intron | 20.0% |
| !!! | TTTATTTTGTTATTCGTTAC+GGG | + | chr2_2:32499860-32499879 | None:intergenic | 20.0% |
| !! | TAAATTTACTTAATCTGAAG+GGG | - | chr2_2:32499876-32499895 | Msa0248460:CDS | 20.0% |
| !! | TTGATTACAAAAGTCTATTT+AGG | - | chr2_2:32500493-32500512 | Msa0248460:intron | 20.0% |
| !! | TTTGTATACAAAACAAAACT+AGG | + | chr2_2:32501534-32501553 | None:intergenic | 20.0% |
| !!! | GATTACTTTTATCAAAGAAT+AGG | - | chr2_2:32501807-32501826 | Msa0248460:intron | 20.0% |
| !! | TACATAAAATTAATTGGTGA+TGG | + | chr2_2:32503100-32503119 | None:intergenic | 20.0% |
| !! | GGCTATTACATAAAATTAAT+TGG | + | chr2_2:32503106-32503125 | None:intergenic | 20.0% |
| !! | GTACTACAATAAATAAAATG+AGG | + | chr2_2:32503154-32503173 | None:intergenic | 20.0% |
| ! | TAGTTAAAACAACAGCTTAT+AGG | - | chr2_2:32498313-32498332 | Msa0248460:CDS | 25.0% |
| ! | ATATGAATTAAGAGTCAGTT+TGG | - | chr2_2:32498617-32498636 | Msa0248460:CDS | 25.0% |
| !! | GCATAAGTTTTTATAGCTTA+TGG | - | chr2_2:32498763-32498782 | Msa0248460:CDS | 25.0% |
| !! | TTAAGTTGTTTATCCAAAGA+GGG | - | chr2_2:32498801-32498820 | Msa0248460:CDS | 25.0% |
| !!! | ATTCTTTTTTCAAACGATCA+AGG | + | chr2_2:32498958-32498977 | None:intergenic | 25.0% |
| ! | TTGATCGTTTGAAAAAAGAA+TGG | - | chr2_2:32498957-32498976 | Msa0248460:CDS | 25.0% |
| ! | TGATCGTTTGAAAAAAGAAT+GGG | - | chr2_2:32498958-32498977 | Msa0248460:CDS | 25.0% |
| ! | AATGAGTAAACAGGTTATAA+TGG | + | chr2_2:32499138-32499157 | None:intergenic | 25.0% |
| !! | CTTTTATATTGTGATGAGAT+AGG | - | chr2_2:32499234-32499253 | Msa0248460:intron | 25.0% |
| !!! | AGAATGATTTTGGAATGATT+AGG | - | chr2_2:32499421-32499440 | Msa0248460:intron | 25.0% |
| !!! | GAATGATTTTGGAATGATTA+GGG | - | chr2_2:32499422-32499441 | Msa0248460:intron | 25.0% |
| ! | TGTTATCTAACCATAATTCT+CGG | + | chr2_2:32499552-32499571 | None:intergenic | 25.0% |
| ! | GAATTATGGTTAGATAACAT+AGG | - | chr2_2:32499553-32499572 | Msa0248460:intron | 25.0% |
| !!! | TTATTTTGTTATTCGTTACG+GGG | + | chr2_2:32499859-32499878 | None:intergenic | 25.0% |
| ! | TTGCATTGCATAATATAATC+AGG | - | chr2_2:32499904-32499923 | Msa0248460:CDS | 25.0% |
| ! | TTAGTTACATTTCCTGAATA+AGG | + | chr2_2:32500312-32500331 | None:intergenic | 25.0% |
| !! | GTATAATGTCATTTGAAAAG+TGG | + | chr2_2:32500409-32500428 | None:intergenic | 25.0% |
| ! | ACACTTGGTTGATTAATTAA+GGG | + | chr2_2:32500451-32500470 | None:intergenic | 25.0% |
| ! | AGTATATTAAGAGAAGTAGA+TGG | + | chr2_2:32500553-32500572 | None:intergenic | 25.0% |
| ! | AAATTGTAGTGTTTGTGAAA+AGG | - | chr2_2:32500580-32500599 | Msa0248460:intron | 25.0% |
| ! | AATTGTAGTGTTTGTGAAAA+GGG | - | chr2_2:32500581-32500600 | Msa0248460:intron | 25.0% |
| ! | AGTTTCCAGAATATTAAAGT+TGG | - | chr2_2:32500842-32500861 | Msa0248460:intron | 25.0% |
| !!! | TTATCCTTTTTTGCGATAAA+AGG | + | chr2_2:32500911-32500930 | None:intergenic | 25.0% |
| ! | AAGGATAAGTTATCTATGAA+TGG | - | chr2_2:32500923-32500942 | Msa0248460:intron | 25.0% |
| ! | AGGATAAGTTATCTATGAAT+GGG | - | chr2_2:32500924-32500943 | Msa0248460:intron | 25.0% |
| !!! | TTATTTTTTATTTGGAAGGG+AGG | - | chr2_2:32501278-32501297 | Msa0248460:intron | 25.0% |
| !! | ATCTATGTAACTGTGATTTT+TGG | - | chr2_2:32501841-32501860 | Msa0248460:intron | 25.0% |
| ! | GTCCAATAAAACAAATATTG+CGG | - | chr2_2:32501876-32501895 | Msa0248460:intron | 25.0% |
| ! | TTCTTTGATCATTTGTGTAT+TGG | + | chr2_2:32502343-32502362 | None:intergenic | 25.0% |
| ! | TTCAGTTATCACTTGTTTAT+TGG | + | chr2_2:32502469-32502488 | None:intergenic | 25.0% |
| !! | CTACATATGATCTTTTTACA+TGG | - | chr2_2:32503008-32503027 | Msa0248460:intron | 25.0% |
| !! | AATTTTATGTAATAGCCATG+TGG | - | chr2_2:32503109-32503128 | Msa0248460:CDS | 25.0% |
| !!! | ATAGAATTAACCCCATTTTT+TGG | - | chr2_2:32503237-32503256 | Msa0248460:exon | 25.0% |
| !!! | TAGAATTAACCCCATTTTTT+GGG | - | chr2_2:32503238-32503257 | Msa0248460:exon | 25.0% |
| CTTACTGAAAAGTTTGGAAA+GGG | + | chr2_2:32498039-32498058 | None:intergenic | 30.0% | |
| TTAAGTGAAGTGAGAAAGAT+TGG | + | chr2_2:32498065-32498084 | None:intergenic | 30.0% | |
| !! | CTTGTTTTCATAAGCTCTTT+AGG | - | chr2_2:32498285-32498304 | Msa0248460:CDS | 30.0% |
| ! | ATACATGTGACTTTAGAAGT+TGG | - | chr2_2:32498402-32498421 | Msa0248460:CDS | 30.0% |
| !!! | GAATGACGATTTTGATTGAT+TGG | - | chr2_2:32498451-32498470 | Msa0248460:CDS | 30.0% |
| ATACGAATTAAGACTCAGTT+TGG | - | chr2_2:32498504-32498523 | Msa0248460:CDS | 30.0% | |
| TACATTGTCAAAACAGCATA+AGG | + | chr2_2:32498598-32498617 | None:intergenic | 30.0% | |
| ! | TCATAAGTTTTCCTAGCTTA+CGG | + | chr2_2:32498679-32498698 | None:intergenic | 30.0% |
| ! | GTTAAGTTGTTTATCCAAAG+AGG | - | chr2_2:32498800-32498819 | Msa0248460:CDS | 30.0% |
| TTACTTCCCAAGATTAAGAA+CGG | - | chr2_2:32499105-32499124 | Msa0248460:CDS | 30.0% | |
| ATATTGTGATGAGATAGGTT+TGG | - | chr2_2:32499239-32499258 | Msa0248460:intron | 30.0% | |
| TGATATATTGCAGGTATTTG+CGG | - | chr2_2:32499295-32499314 | Msa0248460:intron | 30.0% | |
| GCGGTTAAATATCAATGATA+CGG | - | chr2_2:32499314-32499333 | Msa0248460:intron | 30.0% | |
| TTATGGATAGTAGTTGTGAT+CGG | - | chr2_2:32499393-32499412 | Msa0248460:intron | 30.0% | |
| AAAATAGTGTAGAGAACAAG+TGG | - | chr2_2:32499462-32499481 | Msa0248460:intron | 30.0% | |
| GATTAAGTTAACACTGCATA+TGG | - | chr2_2:32499615-32499634 | Msa0248460:intron | 30.0% | |
| !!! | AGCACTACATCTGTTTTAAT+TGG | - | chr2_2:32499975-32499994 | Msa0248460:CDS | 30.0% |
| !!! | ACTACATCTGTTTTAATTGG+TGG | - | chr2_2:32499978-32499997 | Msa0248460:CDS | 30.0% |
| ! | TGTTTTCAATCCAAAACTCT+TGG | + | chr2_2:32500008-32500027 | None:intergenic | 30.0% |
| !! | TAGAGAGTATCAATCATTAC+TGG | + | chr2_2:32500035-32500054 | None:intergenic | 30.0% |
| ! | ATATCAAGGTGTATAGGTTT+TGG | + | chr2_2:32500115-32500134 | None:intergenic | 30.0% |
| ATTATATTAGCCCAGAATGT+AGG | - | chr2_2:32500229-32500248 | Msa0248460:CDS | 30.0% | |
| TTATATTAGCCCAGAATGTA+GGG | - | chr2_2:32500230-32500249 | Msa0248460:CDS | 30.0% | |
| AGTTACAAGAAAAGCCTTAA+AGG | + | chr2_2:32500266-32500285 | None:intergenic | 30.0% | |
| GAAAGAGGTCAAAAGATTTA+GGG | + | chr2_2:32500347-32500366 | None:intergenic | 30.0% | |
| GACACTTGGTTGATTAATTA+AGG | + | chr2_2:32500452-32500471 | None:intergenic | 30.0% | |
| !! | TAGGAGCATTTATACACAAA+AGG | - | chr2_2:32500512-32500531 | Msa0248460:intron | 30.0% |
| !! | AGGAGCATTTATACACAAAA+GGG | - | chr2_2:32500513-32500532 | Msa0248460:intron | 30.0% |
| AAATGCACTATTTCCAAGAA+AGG | - | chr2_2:32500629-32500648 | Msa0248460:intron | 30.0% | |
| GGATAAGTTATCTATGAATG+GGG | - | chr2_2:32500925-32500944 | Msa0248460:intron | 30.0% | |
| CAAGCTTCTTGAAAAAGAAA+AGG | - | chr2_2:32501039-32501058 | Msa0248460:intron | 30.0% | |
| ! | GTTTTTCTTTGTTGCAATGT+TGG | + | chr2_2:32501191-32501210 | None:intergenic | 30.0% |
| !!! | AGTAAATTCAGGTTGGTTTT+TGG | - | chr2_2:32501302-32501321 | Msa0248460:intron | 30.0% |
| !!! | GTAAATTCAGGTTGGTTTTT+GGG | - | chr2_2:32501303-32501322 | Msa0248460:intron | 30.0% |
| TGTTAAAAAGCTGTTTAGCT+AGG | - | chr2_2:32501413-32501432 | Msa0248460:intron | 30.0% | |
| !!! | CTAGTTCGTTGTGTTTTTTA+AGG | + | chr2_2:32501638-32501657 | None:intergenic | 30.0% |
| ! | ACGTTTAGAGCTTATTTGAT+TGG | + | chr2_2:32501714-32501733 | None:intergenic | 30.0% |
| TGACACTAACACTTAACAAA+GGG | + | chr2_2:32501787-32501806 | None:intergenic | 30.0% | |
| !!! | CTCCGCAATATTTGTTTTAT+TGG | + | chr2_2:32501881-32501900 | None:intergenic | 30.0% |
| CAATAAAACAAATATTGCGG+AGG | - | chr2_2:32501879-32501898 | Msa0248460:intron | 30.0% | |
| ! | TTGATCATTTGTGTATTGGT+AGG | + | chr2_2:32502339-32502358 | None:intergenic | 30.0% |
| GTTATCACTTGTTTATTGGT+AGG | + | chr2_2:32502465-32502484 | None:intergenic | 30.0% | |
| AACTTAGCACCAAAAATAAC+TGG | - | chr2_2:32502507-32502526 | Msa0248460:intron | 30.0% | |
| GCTGATAAGAATACTATTGA+TGG | - | chr2_2:32502696-32502715 | Msa0248460:intron | 30.0% | |
| TAGAATTGATGAAAACCACA+TGG | + | chr2_2:32503127-32503146 | None:intergenic | 30.0% | |
| !!! | AGAATTAACCCCATTTTTTG+GGG | - | chr2_2:32503239-32503258 | Msa0248460:exon | 30.0% |
| ! | GAACAGTTTTCGAATGTCAT+CGG | + | chr2_2:32497928-32497947 | None:intergenic | 35.0% |
| TCGAAAACTGTTCGAATCAT+TGG | - | chr2_2:32497935-32497954 | Msa0248460:three_prime_UTR | 35.0% | |
| CGAAAACTGTTCGAATCATT+GGG | - | chr2_2:32497936-32497955 | Msa0248460:three_prime_UTR | 35.0% | |
| TAGAATCAGCAAGGAAATCA+AGG | + | chr2_2:32498013-32498032 | None:intergenic | 35.0% | |
| ! | AAAGGGATTTAGAATCAGCA+AGG | + | chr2_2:32498022-32498041 | None:intergenic | 35.0% |
| CCTTACTGAAAAGTTTGGAA+AGG | + | chr2_2:32498040-32498059 | None:intergenic | 35.0% | |
| ! | CCTTTCCAAACTTTTCAGTA+AGG | - | chr2_2:32498037-32498056 | Msa0248460:three_prime_UTR | 35.0% |
| TGGTACCTTACTGAAAAGTT+TGG | + | chr2_2:32498045-32498064 | None:intergenic | 35.0% | |
| !! | GCCTTATTTGAGTTTATCTG+CGG | - | chr2_2:32498219-32498238 | Msa0248460:CDS | 35.0% |
| TCCGCAGATAAACTCAAATA+AGG | + | chr2_2:32498223-32498242 | None:intergenic | 35.0% | |
| !! | GAGAATTTTTGAGAGAGCTA+TGG | - | chr2_2:32498567-32498586 | Msa0248460:CDS | 35.0% |
| TTATCTTGATTCCGTAAGCT+AGG | - | chr2_2:32498665-32498684 | Msa0248460:CDS | 35.0% | |
| ATGTTGGCATTGCAGTATAA+TGG | - | chr2_2:32498881-32498900 | Msa0248460:CDS | 35.0% | |
| TGTTGGCATTGCAGTATAAT+GGG | - | chr2_2:32498882-32498901 | Msa0248460:CDS | 35.0% | |
| TGGAAAGCTGAAACTTGAAA+AGG | - | chr2_2:32498919-32498938 | Msa0248460:CDS | 35.0% | |
| TTCTGATGTTTCGACTCATA+AGG | - | chr2_2:32499015-32499034 | Msa0248460:CDS | 35.0% | |
| ! | TCATAAGGAGGATTTGGTAA+AGG | - | chr2_2:32499030-32499049 | Msa0248460:CDS | 35.0% |
| CTTGGGAAGTAAATATTGAG+AGG | + | chr2_2:32499097-32499116 | None:intergenic | 35.0% | |
| AACGAACCGTTCTTAATCTT+GGG | + | chr2_2:32499114-32499133 | None:intergenic | 35.0% | |
| TAACGAACCGTTCTTAATCT+TGG | + | chr2_2:32499115-32499134 | None:intergenic | 35.0% | |
| GCTATTTGTGGAAAAGTCTA+TGG | - | chr2_2:32499199-32499218 | Msa0248460:CDS | 35.0% | |
| TGCGATTCTTGATATATTGC+AGG | - | chr2_2:32499286-32499305 | Msa0248460:intron | 35.0% | |
| CATCAAAAGCCTTGACATTA+AGG | - | chr2_2:32499358-32499377 | Msa0248460:intron | 35.0% | |
| TATGGATAGTAGTTGTGATC+GGG | - | chr2_2:32499394-32499413 | Msa0248460:intron | 35.0% | |
| ! | TGGAATGATTAGGGTTTTCT+AGG | - | chr2_2:32499431-32499450 | Msa0248460:intron | 35.0% |
| ! | GGAATGATTAGGGTTTTCTA+GGG | - | chr2_2:32499432-32499451 | Msa0248460:intron | 35.0% |
| !! | ACAAGTGGATTGAAGGATAT+TGG | - | chr2_2:32499477-32499496 | Msa0248460:intron | 35.0% |
| !! | CAAGTGGATTGAAGGATATT+GGG | - | chr2_2:32499478-32499497 | Msa0248460:intron | 35.0% |
| AGGATATTGGGAATAGTTTG+AGG | - | chr2_2:32499490-32499509 | Msa0248460:intron | 35.0% | |
| GGATATTGGGAATAGTTTGA+GGG | - | chr2_2:32499491-32499510 | Msa0248460:intron | 35.0% | |
| CATAGTAGAACCGAGAATTA+TGG | - | chr2_2:32499539-32499558 | Msa0248460:intron | 35.0% | |
| GAAAATAGGAAAGGAAACCA+TGG | - | chr2_2:32499664-32499683 | Msa0248460:intron | 35.0% | |
| ! | TGGTTTACGATAGAGCATTA+TGG | + | chr2_2:32499761-32499780 | None:intergenic | 35.0% |
| TCGTAAACCAAACGAATTTG+CGG | - | chr2_2:32499771-32499790 | Msa0248460:intron | 35.0% | |
| AGATGTAGTGCTTTCAATCA+TGG | + | chr2_2:32499967-32499986 | None:intergenic | 35.0% | |
| TTTCAATCCAAAACTCTTGG+AGG | + | chr2_2:32500005-32500024 | None:intergenic | 35.0% | |
| AACCTATACACCTTGATATG+TGG | - | chr2_2:32500116-32500135 | Msa0248460:CDS | 35.0% | |
| ATAATTCGTGCCACATATCA+AGG | + | chr2_2:32500129-32500148 | None:intergenic | 35.0% | |
| CAAATATCTCCCTACATTCT+GGG | + | chr2_2:32500242-32500261 | None:intergenic | 35.0% | |
| TCAAATATCTCCCTACATTC+TGG | + | chr2_2:32500243-32500262 | None:intergenic | 35.0% | |
| AGGGAGATATTTGACCTTTA+AGG | - | chr2_2:32500249-32500268 | Msa0248460:CDS | 35.0% | |
| GTCAAAAGATTTAGGGATAG+AGG | + | chr2_2:32500340-32500359 | None:intergenic | 35.0% | |
| GGAAAGAGGTCAAAAGATTT+AGG | + | chr2_2:32500348-32500367 | None:intergenic | 35.0% | |
| CTCAACAAATTAAGGGAAAG+AGG | + | chr2_2:32500362-32500381 | None:intergenic | 35.0% | |
| TGAAAAGTGGCTTACACTAA+GGG | + | chr2_2:32500396-32500415 | None:intergenic | 35.0% | |
| TTGAAAAGTGGCTTACACTA+AGG | + | chr2_2:32500397-32500416 | None:intergenic | 35.0% | |
| CAAGAAAGGATTTCCACATT+GGG | - | chr2_2:32500643-32500662 | Msa0248460:intron | 35.0% | |
| ATGGAAATGCTAACATGTGA+GGG | + | chr2_2:32500683-32500702 | None:intergenic | 35.0% | |
| AATGGAAATGCTAACATGTG+AGG | + | chr2_2:32500684-32500703 | None:intergenic | 35.0% | |
| GAGGACCAACTTTAATATTC+TGG | + | chr2_2:32500850-32500869 | None:intergenic | 35.0% | |
| CACAATCACAAAAATGCACA+GGG | + | chr2_2:32500874-32500893 | None:intergenic | 35.0% | |
| TCACAATCACAAAAATGCAC+AGG | + | chr2_2:32500875-32500894 | None:intergenic | 35.0% | |
| ! | TGTGCATTTTTGTGATTGTG+AGG | - | chr2_2:32500874-32500893 | Msa0248460:intron | 35.0% |
| ! | CAGTCCTTTTATCGCAAAAA+AGG | - | chr2_2:32500904-32500923 | Msa0248460:intron | 35.0% |
| TATGAATGGGGAAACTGAAA+GGG | - | chr2_2:32500937-32500956 | Msa0248460:intron | 35.0% | |
| AGGGAAAAGTTATCTATGAG+TGG | - | chr2_2:32500956-32500975 | Msa0248460:intron | 35.0% | |
| GGGAAAAGTTATCTATGAGT+GGG | - | chr2_2:32500957-32500976 | Msa0248460:intron | 35.0% | |
| GGAAAAGTTATCTATGAGTG+GGG | - | chr2_2:32500958-32500977 | Msa0248460:intron | 35.0% | |
| ! | AAAAACAAAGCAGCTTTGAC+AGG | - | chr2_2:32501205-32501224 | Msa0248460:intron | 35.0% |
| ! | AAAACAAAGCAGCTTTGACA+GGG | - | chr2_2:32501206-32501225 | Msa0248460:intron | 35.0% |
| !! | CATGATCCTTTCAAGTTCTT+GGG | + | chr2_2:32501233-32501252 | None:intergenic | 35.0% |
| TTTGCCATAACTAGCTGATA+AGG | - | chr2_2:32501330-32501349 | Msa0248460:intron | 35.0% | |
| ACTACCTTATCAGCTAGTTA+TGG | + | chr2_2:32501337-32501356 | None:intergenic | 35.0% | |
| CTGACACTAACACTTAACAA+AGG | + | chr2_2:32501788-32501807 | None:intergenic | 35.0% | |
| !!! | AACTGTGATTTTTGGTCTTC+AGG | - | chr2_2:32501849-32501868 | Msa0248460:intron | 35.0% |
| !!! | TGATTTTTGGTCTTCAGGAA+TGG | - | chr2_2:32501854-32501873 | Msa0248460:intron | 35.0% |
| TAAAACAAATATTGCGGAGG+AGG | - | chr2_2:32501882-32501901 | Msa0248460:intron | 35.0% | |
| GAGAAAATCACTTCCCAAAT+CGG | - | chr2_2:32501957-32501976 | Msa0248460:intron | 35.0% | |
| TTGCTTTCACTTTCCGATTT+GGG | + | chr2_2:32501973-32501992 | None:intergenic | 35.0% | |
| ATTGCTTTCACTTTCCGATT+TGG | + | chr2_2:32501974-32501993 | None:intergenic | 35.0% | |
| AAATCGGAAAGTGAAAGCAA+TGG | - | chr2_2:32501973-32501992 | Msa0248460:intron | 35.0% | |
| AATCGGAAAGTGAAAGCAAT+GGG | - | chr2_2:32501974-32501993 | Msa0248460:intron | 35.0% | |
| !! | AAATCATGTTCTGGTTCAGT+AGG | + | chr2_2:32502072-32502091 | None:intergenic | 35.0% |
| ! | ACTGAACCAGAACATGATTT+TGG | - | chr2_2:32502072-32502091 | Msa0248460:CDS | 35.0% |
| ! | CTGAACCAGAACATGATTTT+GGG | - | chr2_2:32502073-32502092 | Msa0248460:CDS | 35.0% |
| ! | TGAACCAGAACATGATTTTG+GGG | - | chr2_2:32502074-32502093 | Msa0248460:CDS | 35.0% |
| TCTTCAGCAGTATCAAACTT+CGG | + | chr2_2:32502192-32502211 | None:intergenic | 35.0% | |
| AGTTTCATCGTTTGTAGAAG+AGG | + | chr2_2:32502244-32502263 | None:intergenic | 35.0% | |
| AAACGATGAAACTGAAGACA+TGG | - | chr2_2:32502251-32502270 | Msa0248460:intron | 35.0% | |
| ! | TGTATTGGTAGGTTGAGATT+CGG | + | chr2_2:32502328-32502347 | None:intergenic | 35.0% |
| ! | TCTATCACTCTTGTATTGGT+AGG | + | chr2_2:32502381-32502400 | None:intergenic | 35.0% |
| CTCTTCTATCACTCTTGTAT+TGG | + | chr2_2:32502385-32502404 | None:intergenic | 35.0% | |
| GTTATTCTCATTAGCCAACT+GGG | + | chr2_2:32502568-32502587 | None:intergenic | 35.0% | |
| TGTTATTCTCATTAGCCAAC+TGG | + | chr2_2:32502569-32502588 | None:intergenic | 35.0% | |
| AAAAGCTGTGAAAGGCTAAA+TGG | + | chr2_2:32502594-32502613 | None:intergenic | 35.0% | |
| ! | CATTAGTTTCCCAGAACAAA+CGG | - | chr2_2:32502620-32502639 | Msa0248460:intron | 35.0% |
| TACTATTGATGGAACTGTCA+CGG | - | chr2_2:32502707-32502726 | Msa0248460:intron | 35.0% | |
| TGGAGCAGAAACTATATCAT+CGG | + | chr2_2:32502784-32502803 | None:intergenic | 35.0% | |
| ! | TCAACGATTTTCTCAACTAC+TGG | + | chr2_2:32502804-32502823 | None:intergenic | 35.0% |
| AAATCGTTGAAACAAGTCCA+AGG | - | chr2_2:32502814-32502833 | Msa0248460:intron | 35.0% | |
| AATCGTTGAAACAAGTCCAA+GGG | - | chr2_2:32502815-32502834 | Msa0248460:intron | 35.0% | |
| CGATCTGCAAATGTTGAAAT+AGG | - | chr2_2:32502840-32502859 | Msa0248460:intron | 35.0% | |
| !!! | TACATGGTTTTGACTTCAAC+AGG | - | chr2_2:32503024-32503043 | Msa0248460:intron | 35.0% |
| ACACTAGGTGTAATGTTATG+AGG | - | chr2_2:32503070-32503089 | Msa0248460:CDS | 35.0% | |
| ATTCTATTGTTGACCACATG+AGG | + | chr2_2:32503224-32503243 | None:intergenic | 35.0% | |
| TGGAACTAACCCCAAAAAAT+GGG | + | chr2_2:32503251-32503270 | None:intergenic | 35.0% | |
| AAACAAACAGCTTGCAAGCA+TGG | - | chr2_2:32497836-32497855 | Msa0248460:three_prime_UTR | 40.0% | |
| AGAGCAGTGAGAATATTCGT+CGG | - | chr2_2:32497879-32497898 | Msa0248460:three_prime_UTR | 40.0% | |
| AGAATATTCGTCGGAGGATT+AGG | - | chr2_2:32497888-32497907 | Msa0248460:three_prime_UTR | 40.0% | |
| TAAACACCTACGAGACTGTT+TGG | - | chr2_2:32498245-32498264 | Msa0248460:CDS | 40.0% | |
| AAACACCTACGAGACTGTTT+GGG | - | chr2_2:32498246-32498265 | Msa0248460:CDS | 40.0% | |
| !! | TATAATGGGTGTGTGTGGAA+AGG | - | chr2_2:32498896-32498915 | Msa0248460:CDS | 40.0% |
| ACGATCAAGGTAATGCTCTT+TGG | + | chr2_2:32498945-32498964 | None:intergenic | 40.0% | |
| TGATGTTTCGACTCATAAGG+AGG | - | chr2_2:32499018-32499037 | Msa0248460:CDS | 40.0% | |
| TTCGACTCATAAGGAGGATT+TGG | - | chr2_2:32499024-32499043 | Msa0248460:CDS | 40.0% | |
| ! | TCTACAAAGCGTCTTGCATT+AGG | + | chr2_2:32499061-32499080 | None:intergenic | 40.0% |
| ATATTGAGAGGCTTTGCATC+TGG | + | chr2_2:32499085-32499104 | None:intergenic | 40.0% | |
| ! | TGATGAGATAGGTTTGGTCA+AGG | - | chr2_2:32499245-32499264 | Msa0248460:intron | 40.0% |
| ACTATCCATAACTGTGATCG+TGG | + | chr2_2:32499384-32499403 | None:intergenic | 40.0% | |
| ! | ATCGGGTGGAAGAATGATTT+TGG | - | chr2_2:32499411-32499430 | Msa0248460:intron | 40.0% |
| !! | ATGATTAGGGTTTTCTAGGG+TGG | - | chr2_2:32499435-32499454 | Msa0248460:intron | 40.0% |
| !! | GTAGAGAACAAGTGGATTGA+AGG | - | chr2_2:32499470-32499489 | Msa0248460:intron | 40.0% |
| !! | TTGTTGTTTGCTGAAGTCCA+TGG | + | chr2_2:32499684-32499703 | None:intergenic | 40.0% |
| TGCCACATATCAAGGTGTAT+AGG | + | chr2_2:32500121-32500140 | None:intergenic | 40.0% | |
| ACGAATTATTGTGTAGCGCT+AGG | - | chr2_2:32500140-32500159 | Msa0248460:CDS | 40.0% | |
| ATAAGGATGCAGTTAGCAAG+AGG | + | chr2_2:32500295-32500314 | None:intergenic | 40.0% | |
| TGCTAACTGCATCCTTATTC+AGG | - | chr2_2:32500297-32500316 | Msa0248460:intron | 40.0% | |
| TCTTCATCGTTCAAGACACT+TGG | + | chr2_2:32500466-32500485 | None:intergenic | 40.0% | |
| CCAATGTGGAAATCCTTTCT+TGG | + | chr2_2:32500645-32500664 | None:intergenic | 40.0% | |
| CCAAGAAAGGATTTCCACAT+TGG | - | chr2_2:32500642-32500661 | Msa0248460:intron | 40.0% | |
| ACATGTTAAGGAACCCAATG+TGG | + | chr2_2:32500659-32500678 | None:intergenic | 40.0% | |
| TGCTACAAATATACCTGTGC+AGG | - | chr2_2:32500778-32500797 | Msa0248460:intron | 40.0% | |
| GTTAAATCCATACCCTTCAG+TGG | - | chr2_2:32500800-32500819 | Msa0248460:intron | 40.0% | |
| CTATGAATGGGGAAACTGAA+AGG | - | chr2_2:32500936-32500955 | Msa0248460:intron | 40.0% | |
| GTTTCTAACACCAAGCATCT+TGG | - | chr2_2:32501061-32501080 | Msa0248460:intron | 40.0% | |
| GTAGATAGTGCAACAGATGA+TGG | - | chr2_2:32501139-32501158 | Msa0248460:intron | 40.0% | |
| !! | CCATGATCCTTTCAAGTTCT+TGG | + | chr2_2:32501234-32501253 | None:intergenic | 40.0% |
| CCAAGAACTTGAAAGGATCA+TGG | - | chr2_2:32501231-32501250 | Msa0248460:intron | 40.0% | |
| TGAAAGGATCATGGAAAGTC+AGG | - | chr2_2:32501240-32501259 | Msa0248460:intron | 40.0% | |
| GTTTAGCTAGGTTATTCAGC+TGG | - | chr2_2:32501425-32501444 | Msa0248460:intron | 40.0% | |
| TAACACTTAACAAAGGGCTG+TGG | + | chr2_2:32501781-32501800 | None:intergenic | 40.0% | |
| AACCCATTGAAGCGCAAAAA+AGG | - | chr2_2:32501905-32501924 | Msa0248460:intron | 40.0% | |
| !!! | CTCCTTTTTTGCGCTTCAAT+GGG | + | chr2_2:32501910-32501929 | None:intergenic | 40.0% |
| ATCGGAAAGTGAAAGCAATG+GGG | - | chr2_2:32501975-32501994 | Msa0248460:intron | 40.0% | |
| ! | CATTTTACTCTTGCCTACAG+GGG | + | chr2_2:32502013-32502032 | None:intergenic | 40.0% |
| ! | GCATTTTACTCTTGCCTACA+GGG | + | chr2_2:32502014-32502033 | None:intergenic | 40.0% |
| ! | TGCATTTTACTCTTGCCTAC+AGG | + | chr2_2:32502015-32502034 | None:intergenic | 40.0% |
| AAAATGCAGACCCTTCTAGA+TGG | - | chr2_2:32502027-32502046 | Msa0248460:CDS | 40.0% | |
| AAATGCAGACCCTTCTAGAT+GGG | - | chr2_2:32502028-32502047 | Msa0248460:CDS | 40.0% | |
| !! | CTTCTGAGACCATGAAACTT+TGG | + | chr2_2:32502106-32502125 | None:intergenic | 40.0% |
| !! | TGGAGAGAACTTGTTGGTAA+AGG | - | chr2_2:32502132-32502151 | Msa0248460:CDS | 40.0% |
| !! | AGAGAACTTGTTGGTAAAGG+AGG | - | chr2_2:32502135-32502154 | Msa0248460:CDS | 40.0% |
| AAACTTCGGCAATATGAGAG+AGG | + | chr2_2:32502178-32502197 | None:intergenic | 40.0% | |
| GAAGATCAGCAAAACTCTCA+TGG | - | chr2_2:32502207-32502226 | Msa0248460:intron | 40.0% | |
| ! | CTTTTGTAGGTTCGCTTTCT+GGG | + | chr2_2:32502290-32502309 | None:intergenic | 40.0% |
| ! | ACTTTTGTAGGTTCGCTTTC+TGG | + | chr2_2:32502291-32502310 | None:intergenic | 40.0% |
| !! | GGCTCTTCTATCACTTTTGT+AGG | + | chr2_2:32502303-32502322 | None:intergenic | 40.0% |
| TTCTTCTATCACCTGTGCAT+TGG | + | chr2_2:32502427-32502446 | None:intergenic | 40.0% | |
| AAGTTATGCTGAGTTTCAGC+AGG | + | chr2_2:32502492-32502511 | None:intergenic | 40.0% | |
| !! | ACACCTGTGCCAGTTATTTT+TGG | + | chr2_2:32502519-32502538 | None:intergenic | 40.0% |
| CATGGTGGCAAAAGAAATCT+TGG | - | chr2_2:32502541-32502560 | Msa0248460:intron | 40.0% | |
| AAAGAAATCTTGGACCCAGT+TGG | - | chr2_2:32502551-32502570 | Msa0248460:intron | 40.0% | |
| !! | TGTTCTGGGAAACTAATGTC+AGG | + | chr2_2:32502618-32502637 | None:intergenic | 40.0% |
| GTTCTTTAGCCGTTTGTTCT+GGG | + | chr2_2:32502632-32502651 | None:intergenic | 40.0% | |
| !! | GTGCTGATTCTTTGAAAGAG+TGG | - | chr2_2:32502886-32502905 | Msa0248460:intron | 40.0% |
| AAAGCTAAAGCTGCTGTTAG+TGG | - | chr2_2:32502912-32502931 | Msa0248460:intron | 40.0% | |
| AAACGCAGTGAGAAGAAGTA+AGG | - | chr2_2:32502948-32502967 | Msa0248460:intron | 40.0% | |
| AACGCAGTGAGAAGAAGTAA+GGG | - | chr2_2:32502949-32502968 | Msa0248460:intron | 40.0% | |
| AATTTCCATACAGCAGAAGC+AGG | - | chr2_2:32502976-32502995 | Msa0248460:intron | 40.0% | |
| TGACTTCAACAGGCATAAGT+TGG | - | chr2_2:32503034-32503053 | Msa0248460:intron | 40.0% | |
| !! | GGTCTTTGCTGTTATACACT+AGG | - | chr2_2:32503055-32503074 | Msa0248460:CDS | 40.0% |
| TGAGGCTTCATTAAGGAATC+TGG | + | chr2_2:32503206-32503225 | None:intergenic | 40.0% | |
| TTCCTTAATGAAGCCTCATG+TGG | - | chr2_2:32503208-32503227 | Msa0248460:CDS | 40.0% | |
| GGAACTAACCCCAAAAAATG+GGG | + | chr2_2:32503250-32503269 | None:intergenic | 40.0% | |
| CTGGAACTAACCCCAAAAAA+TGG | + | chr2_2:32503252-32503271 | None:intergenic | 40.0% | |
| TCGAATGTCATCGGTGGTTA+CGG | + | chr2_2:32497919-32497938 | None:intergenic | 45.0% | |
| ! | CAGTTTTCGAATGTCATCGG+TGG | + | chr2_2:32497925-32497944 | None:intergenic | 45.0% |
| CTCGAAACCATTCGTACCAA+AGG | - | chr2_2:32497972-32497991 | Msa0248460:three_prime_UTR | 45.0% | |
| TTAAGGGTTTAGGCCCTCTT+TGG | + | chr2_2:32498817-32498836 | None:intergenic | 45.0% | |
| !! | TGCAGTATAATGGGTGTGTG+TGG | - | chr2_2:32498891-32498910 | Msa0248460:CDS | 45.0% |
| TGAGTCGAAACATCAGAAGC+TGG | + | chr2_2:32499013-32499032 | None:intergenic | 45.0% | |
| ! | TGATCGTGGCCTTAATGTCA+AGG | + | chr2_2:32499370-32499389 | None:intergenic | 45.0% |
| TAAGGCCACGATCACAGTTA+TGG | - | chr2_2:32499376-32499395 | Msa0248460:intron | 45.0% | |
| TTGGGAATAGTTTGAGGGTG+AGG | - | chr2_2:32499496-32499515 | Msa0248460:intron | 45.0% | |
| TGGGAATAGTTTGAGGGTGA+GGG | - | chr2_2:32499497-32499516 | Msa0248460:intron | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr2_2:32499711-32499730 | Msa0248460:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr2_2:32499712-32499731 | Msa0248460:intron | 45.0% |
| TCAGACTGAAGATCTGAAGG+TGG | + | chr2_2:32499816-32499835 | None:intergenic | 45.0% | |
| !! | CTTTTGATTCACTCGAGTCG+CGG | + | chr2_2:32500065-32500084 | None:intergenic | 45.0% |
| ! | GGCGTAGAGTCACTTTACTA+TGG | + | chr2_2:32500094-32500113 | None:intergenic | 45.0% |
| ! | ACATGTGAGGGCACATGTTA+AGG | + | chr2_2:32500671-32500690 | None:intergenic | 45.0% |
| GGTATGGATTTAACCTGCAC+AGG | + | chr2_2:32500794-32500813 | None:intergenic | 45.0% | |
| TGCTTACCAGTTCCACTGAA+GGG | + | chr2_2:32500815-32500834 | None:intergenic | 45.0% | |
| TCACAAAAATGCACAGGGAG+AGG | + | chr2_2:32500869-32500888 | None:intergenic | 45.0% | |
| ATGAGTGGGGAAGCAGAAAT+TGG | - | chr2_2:32500971-32500990 | Msa0248460:intron | 45.0% | |
| GTGCTTCTTTCCAAGATGCT+TGG | + | chr2_2:32501074-32501093 | None:intergenic | 45.0% | |
| GGAAGGGAGGTAGTAAATTC+AGG | - | chr2_2:32501291-32501310 | Msa0248460:intron | 45.0% | |
| GGGAGGTAGTAAATTCAGGT+TGG | - | chr2_2:32501295-32501314 | Msa0248460:intron | 45.0% | |
| !!! | GCTCCTTTTTTGCGCTTCAA+TGG | + | chr2_2:32501911-32501930 | None:intergenic | 45.0% |
| GACTCCCCAAAATCATGTTC+TGG | + | chr2_2:32502081-32502100 | None:intergenic | 45.0% | |
| TCTTCGTGGAGAGAACTTGT+TGG | - | chr2_2:32502126-32502145 | Msa0248460:CDS | 45.0% | |
| ! | TCTATCACCTGTGCATTGGT+AGG | + | chr2_2:32502423-32502442 | None:intergenic | 45.0% |
| GCACCAAAAATAACTGGCAC+AGG | - | chr2_2:32502513-32502532 | Msa0248460:intron | 45.0% | |
| TAACTGGCACAGGTGTTTCA+TGG | - | chr2_2:32502523-32502542 | Msa0248460:intron | 45.0% | |
| TGTCAGGCAAAAGCTGTGAA+AGG | + | chr2_2:32502602-32502621 | None:intergenic | 45.0% | |
| GGTTCTTTAGCCGTTTGTTC+TGG | + | chr2_2:32502633-32502652 | None:intergenic | 45.0% | |
| TCCAGTGAGTGCAAGCATAA+TGG | - | chr2_2:32502672-32502691 | Msa0248460:intron | 45.0% | |
| ACCATTATGCTTGCACTCAC+TGG | + | chr2_2:32502676-32502695 | None:intergenic | 45.0% | |
| ATTGATGGAACTGTCACGGA+TGG | - | chr2_2:32502711-32502730 | Msa0248460:intron | 45.0% | |
| TCACGGATGGCTTCAACTTA+GGG | - | chr2_2:32502724-32502743 | Msa0248460:intron | 45.0% | |
| ACATTTGCAGATCGTTCCCT+TGG | + | chr2_2:32502834-32502853 | None:intergenic | 45.0% | |
| ACAATCCTGCTTCTGCTGTA+TGG | + | chr2_2:32502984-32503003 | None:intergenic | 45.0% | |
| TTGTAGTACATGTCCGTTCC+TGG | - | chr2_2:32503165-32503184 | Msa0248460:CDS | 45.0% | |
| TGTAGTACATGTCCGTTCCT+GGG | - | chr2_2:32503166-32503185 | Msa0248460:CDS | 45.0% | |
| TACCAAAACTTGCCCAGGAA+CGG | + | chr2_2:32503181-32503200 | None:intergenic | 45.0% | |
| TGGATTACCAAAACTTGCCC+AGG | + | chr2_2:32503186-32503205 | None:intergenic | 45.0% | |
| GACCACATGAGGCTTCATTA+AGG | + | chr2_2:32503213-32503232 | None:intergenic | 45.0% | |
| CAAACAGCTTGCAAGCATGG+AGG | - | chr2_2:32497839-32497858 | Msa0248460:three_prime_UTR | 50.0% | |
| GCAGTGAGAATATTCGTCGG+AGG | - | chr2_2:32497882-32497901 | Msa0248460:three_prime_UTR | 50.0% | |
| ACTGCGACCTTTGGTACGAA+TGG | + | chr2_2:32497982-32498001 | None:intergenic | 50.0% | |
| TCTCTCCCAAACAGTCTCGT+AGG | + | chr2_2:32498254-32498273 | None:intergenic | 50.0% | |
| AATGGGTGTGTGTGGAAAGG+TGG | - | chr2_2:32498899-32498918 | Msa0248460:CDS | 50.0% | |
| GTCGAAACATCAGAAGCTGG+TGG | + | chr2_2:32499010-32499029 | None:intergenic | 50.0% | |
| GGATAGTAGTTGTGATCGGG+TGG | - | chr2_2:32499397-32499416 | Msa0248460:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr2_2:32499713-32499732 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr2_2:32499710-32499729 | Msa0248460:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr2_2:32499716-32499735 | Msa0248460:intron | 50.0% | |
| ACGCTCACCGCAAATTCGTT+TGG | + | chr2_2:32499781-32499800 | None:intergenic | 50.0% | |
| AAACGAATTTGCGGTGAGCG+TGG | - | chr2_2:32499780-32499799 | Msa0248460:intron | 50.0% | |
| GCGTCAGACTGAAGATCTGA+AGG | + | chr2_2:32499819-32499838 | None:intergenic | 50.0% | |
| ! | TGGTGGTCCTCCAAGAGTTT+TGG | - | chr2_2:32499995-32500014 | Msa0248460:CDS | 50.0% |
| TCCATACCCTTCAGTGGAAC+TGG | - | chr2_2:32500806-32500825 | Msa0248460:intron | 50.0% | |
| ACCAGTTCCACTGAAGGGTA+TGG | + | chr2_2:32500810-32500829 | None:intergenic | 50.0% | |
| GTGCTTACCAGTTCCACTGA+AGG | + | chr2_2:32500816-32500835 | None:intergenic | 50.0% | |
| AGTGGGGAAGCAGAAATTGG+TGG | - | chr2_2:32500974-32500993 | Msa0248460:intron | 50.0% | |
| CAGGGACCCAAGAACTTGAA+AGG | - | chr2_2:32501224-32501243 | Msa0248460:intron | 50.0% | |
| GAGCAAGAGCGATTCTAGCA+AGG | - | chr2_2:32501927-32501946 | Msa0248460:intron | 50.0% | |
| AGATCCCAGCCCATCTAGAA+GGG | + | chr2_2:32502040-32502059 | None:intergenic | 50.0% | |
| GGGAGTCTGCCAAAGTTTCA+TGG | - | chr2_2:32502094-32502113 | Msa0248460:CDS | 50.0% | |
| CATGGTCTCAGAAGTCTTCG+TGG | - | chr2_2:32502112-32502131 | Msa0248460:CDS | 50.0% | |
| ! | TTGGTAGGTTGAGATTCGGC+AGG | + | chr2_2:32502324-32502343 | None:intergenic | 50.0% |
| TTGGTAGGCAGAGATTCAGC+AGG | + | chr2_2:32502408-32502427 | None:intergenic | 50.0% | |
| ATCTCTGCCTACCAATGCAC+AGG | - | chr2_2:32502413-32502432 | Msa0248460:intron | 50.0% | |
| ! | TTGGTAGGTTGAGCTTCAGC+AGG | + | chr2_2:32502366-32502385 | None:intergenic | 50.0% |
| ! | GAACCCATTTTGTACCCTGC+CGG | - | chr2_2:32502648-32502667 | Msa0248460:intron | 50.0% |
| GAACCGGCAGGGTACAAAAT+GGG | + | chr2_2:32502654-32502673 | None:intergenic | 50.0% | |
| ATGCTTGCACTCACTGGAAC+CGG | + | chr2_2:32502670-32502689 | None:intergenic | 50.0% | |
| GTCACGGATGGCTTCAACTT+AGG | - | chr2_2:32502723-32502742 | Msa0248460:intron | 50.0% | |
| CACGGATGGCTTCAACTTAG+GGG | - | chr2_2:32502725-32502744 | Msa0248460:intron | 50.0% | |
| CCAGCATGCTCACTATGTTC+TGG | + | chr2_2:32502759-32502778 | None:intergenic | 50.0% | |
| CCAGAACATAGTGAGCATGC+TGG | - | chr2_2:32502756-32502775 | Msa0248460:intron | 50.0% | |
| GTAAGCGAGACTGCGACCTT+TGG | + | chr2_2:32497991-32498010 | None:intergenic | 55.0% | |
| AGTTTGAGGGTGAGGGAGTG+TGG | - | chr2_2:32499504-32499523 | Msa0248460:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr2_2:32499718-32499737 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr2_2:32499724-32499743 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr2_2:32499725-32499744 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr2_2:32499724-32499743 | Msa0248460:intron | 55.0% | |
| GTTACGGGGATAGCTCAGTC+GGG | + | chr2_2:32499845-32499864 | None:intergenic | 55.0% | |
| CGTTACGGGGATAGCTCAGT+CGG | + | chr2_2:32499846-32499865 | None:intergenic | 55.0% | |
| GTTGCGTCTAGTACCCCTGT+AGG | - | chr2_2:32501997-32502016 | Msa0248460:CDS | 55.0% | |
| ! | CAGACCCTTCTAGATGGGCT+GGG | - | chr2_2:32502033-32502052 | Msa0248460:CDS | 55.0% |
| CAGATCCCAGCCCATCTAGA+AGG | + | chr2_2:32502041-32502060 | None:intergenic | 55.0% | |
| !! | CTTCTAGATGGGCTGGGATC+TGG | - | chr2_2:32502039-32502058 | Msa0248460:CDS | 55.0% |
| CTGGCACAGGTGTTTCATGG+TGG | - | chr2_2:32502526-32502545 | Msa0248460:intron | 55.0% | |
| GGAACCGGCAGGGTACAAAA+TGG | + | chr2_2:32502655-32502674 | None:intergenic | 55.0% | |
| ! | GTCCGTTCCTGGGCAAGTTT+TGG | - | chr2_2:32503176-32503195 | Msa0248460:CDS | 55.0% |
| GCAGACCCTTCTAGATGGGC+TGG | - | chr2_2:32502032-32502051 | Msa0248460:CDS | 60.0% | |
| TGCACTCACTGGAACCGGCA+GGG | + | chr2_2:32502665-32502684 | None:intergenic | 60.0% | |
| TTGCACTCACTGGAACCGGC+AGG | + | chr2_2:32502666-32502685 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 32497831 | 32503277 | 32497831 | ID=Msa0248460;Name=Msa0248460 |
| chr2_2 | mRNA | 32497831 | 32503277 | 32497831 | ID=Msa0248460-mRNA-1;Parent=Msa0248460;Name=Msa0248460-mRNA-1;_AED=0.07;_eAED=0.07;_QI=24|1|1|1|1|1|4|309|664 |
| chr2_2 | exon | 32497831 | 32499237 | 32497831 | ID=Msa0248460-mRNA-1:exon:11086;Parent=Msa0248460-mRNA-1 |
| chr2_2 | exon | 32499847 | 32500308 | 32499847 | ID=Msa0248460-mRNA-1:exon:11085;Parent=Msa0248460-mRNA-1 |
| chr2_2 | exon | 32501982 | 32502212 | 32501982 | ID=Msa0248460-mRNA-1:exon:11084;Parent=Msa0248460-mRNA-1 |
| chr2_2 | exon | 32503050 | 32503277 | 32503050 | ID=Msa0248460-mRNA-1:exon:11083;Parent=Msa0248460-mRNA-1 |
| chr2_2 | five_prime_UTR | 32503254 | 32503277 | 32503254 | ID=Msa0248460-mRNA-1:five_prime_utr;Parent=Msa0248460-mRNA-1 |
| chr2_2 | CDS | 32503050 | 32503253 | 32503050 | ID=Msa0248460-mRNA-1:cds;Parent=Msa0248460-mRNA-1 |
| chr2_2 | CDS | 32501982 | 32502212 | 32501982 | ID=Msa0248460-mRNA-1:cds;Parent=Msa0248460-mRNA-1 |
| chr2_2 | CDS | 32499847 | 32500308 | 32499847 | ID=Msa0248460-mRNA-1:cds;Parent=Msa0248460-mRNA-1 |
| chr2_2 | CDS | 32498140 | 32499237 | 32498140 | ID=Msa0248460-mRNA-1:cds;Parent=Msa0248460-mRNA-1 |
| chr2_2 | three_prime_UTR | 32497831 | 32498139 | 32497831 | ID=Msa0248460-mRNA-1:three_prime_utr;Parent=Msa0248460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
