Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1187530 | sp|H1A981|C7263_MEDTR | 72.581 | 186 | 34 | 1 | 1 | 169 | 67 | 252 | 5.61e-90 | 275 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1187530 | G7LJ50 | 81.383 | 188 | 18 | 1 | 1 | 171 | 67 | 254 | 2.74e-104 | 314 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008850 | Msa1187530 | 0.801645 | 8.167504e-49 | -8.615850e-47 |
| Msa0041970 | Msa1187530 | 0.819555 | 1.092086e-52 | -8.615850e-47 |
| Msa0044710 | Msa1187530 | 0.806952 | 6.406245e-50 | -8.615850e-47 |
| Msa0050760 | Msa1187530 | 0.805557 | 1.260395e-49 | -8.615850e-47 |
| Msa0617830 | Msa1187530 | 0.813880 | 2.045399e-51 | -8.615850e-47 |
| Msa0622340 | Msa1187530 | 0.806382 | 8.451062e-50 | -8.615850e-47 |
| Msa0650650 | Msa1187530 | 0.807828 | 4.176924e-50 | -8.615850e-47 |
| Msa0650740 | Msa1187530 | 0.801393 | 9.197826e-49 | -8.615850e-47 |
| Msa0789270 | Msa1187530 | 0.818717 | 1.693983e-52 | -8.615850e-47 |
| Msa0789280 | Msa1187530 | 0.812307 | 4.528029e-51 | -8.615850e-47 |
| Msa0789290 | Msa1187530 | 0.813453 | 2.540134e-51 | -8.615850e-47 |
| Msa0789300 | Msa1187530 | 0.811736 | 6.030802e-51 | -8.615850e-47 |
| Msa0148360 | Msa1187530 | 0.802014 | 6.859480e-49 | -8.615850e-47 |
| Msa0151690 | Msa1187530 | 0.831007 | 2.130627e-55 | -8.615850e-47 |
| Msa0164360 | Msa1187530 | 0.802377 | 5.774180e-49 | -8.615850e-47 |
| Msa0182930 | Msa1187530 | 0.806069 | 9.836369e-50 | -8.615850e-47 |
| Msa0188630 | Msa1187530 | 0.814670 | 1.368923e-51 | -8.615850e-47 |
| Msa0223100 | Msa1187530 | 0.813634 | 2.318217e-51 | -8.615850e-47 |
| Msa0223290 | Msa1187530 | 0.816440 | 5.523319e-52 | -8.615850e-47 |
| Msa0223380 | Msa1187530 | 0.834651 | 2.649658e-56 | -8.615850e-47 |
| Msa0236440 | Msa1187530 | 0.806907 | 6.549813e-50 | -8.615850e-47 |
| Msa0419620 | Msa1187530 | -0.819481 | 1.135234e-52 | -8.615850e-47 |
| Msa0431830 | Msa1187530 | 0.805842 | 1.098155e-49 | -8.615850e-47 |
| Msa1092090 | Msa1187530 | 0.803075 | 4.143696e-49 | -8.615850e-47 |
| Msa0271040 | Msa1187530 | 0.800448 | 1.434567e-48 | -8.615850e-47 |
| Msa0282170 | Msa1187530 | 0.808387 | 3.175372e-50 | -8.615850e-47 |
| Msa0292180 | Msa1187530 | 0.805808 | 1.116422e-49 | -8.615850e-47 |
| Msa0302650 | Msa1187530 | 0.808842 | 2.539040e-50 | -8.615850e-47 |
| Msa0309350 | Msa1187530 | 0.806138 | 9.513889e-50 | -8.615850e-47 |
| Msa1130110 | Msa1187530 | 0.800112 | 1.678896e-48 | -8.615850e-47 |
| Msa1187520 | Msa1187530 | 0.841662 | 4.146584e-58 | -8.615850e-47 |
| Msa1187530 | Msa1217810 | 0.801881 | 7.304184e-49 | -8.615850e-47 |
| Msa1187530 | Msa1218650 | 0.806410 | 8.337046e-50 | -8.615850e-47 |
| Msa1187530 | Msa1233500 | 0.809505 | 1.830966e-50 | -8.615850e-47 |
| Msa1187530 | Msa1241820 | 0.809308 | 2.017997e-50 | -8.615850e-47 |
| Msa1187530 | Msa1282920 | 0.882267 | 1.202394e-70 | -8.615850e-47 |
| Msa1187530 | Msa1322190 | 0.818355 | 2.046613e-52 | -8.615850e-47 |
| Msa1187530 | Msa1397340 | 0.800799 | 1.216524e-48 | -8.615850e-47 |
| Msa1187530 | Msa1397970 | 0.800024 | 1.749297e-48 | -8.615850e-47 |
| Msa1187530 | Msa1419110 | 0.802666 | 5.034674e-49 | -8.615850e-47 |
| Msa1187530 | Msa1423450 | 0.805562 | 1.257355e-49 | -8.615850e-47 |
| Msa1187530 | Msa1427830 | 0.816232 | 6.148122e-52 | -8.615850e-47 |
| Msa1187530 | Msa1439230 | 0.806067 | 9.847908e-50 | -8.615850e-47 |
| Msa1187530 | Msa1440600 | 0.804852 | 1.770230e-49 | -8.615850e-47 |
| Msa1187530 | Msa1450020 | 0.807761 | 4.316120e-50 | -8.615850e-47 |
| Msa1187530 | Msa1454110 | 0.816730 | 4.757588e-52 | -8.615850e-47 |
| Msa0511720 | Msa1187530 | -0.812290 | 4.566583e-51 | -8.615850e-47 |
| Msa0576600 | Msa1187530 | 0.808560 | 2.916653e-50 | -8.615850e-47 |
| Msa0579340 | Msa1187530 | 0.819412 | 1.177617e-52 | -8.615850e-47 |
| Msa0847200 | Msa1187530 | 0.805325 | 1.409576e-49 | -8.615850e-47 |
| Msa0870690 | Msa1187530 | 0.800478 | 1.414294e-48 | -8.615850e-47 |
| Msa0908170 | Msa1187530 | 0.833372 | 5.539554e-56 | -8.615850e-47 |
| Msa0944770 | Msa1187530 | 0.805675 | 1.190235e-49 | -8.615850e-47 |
| Msa0959010 | Msa1187530 | 0.808847 | 2.532371e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1187530 | MtrunA17_Chr8g0354511 | 81.383 | 188 | 18 | 1 | 1 | 171 | 67 | 254 | 1.16e-106 | 315 |
| Msa1187530 | MtrunA17_Chr8g0354571 | 75.269 | 186 | 29 | 1 | 1 | 169 | 67 | 252 | 5.68e-95 | 285 |
| Msa1187530 | MtrunA17_Chr8g0354531 | 71.505 | 186 | 36 | 1 | 1 | 169 | 189 | 374 | 1.13e-89 | 275 |
| Msa1187530 | MtrunA17_Chr8g0354561 | 63.978 | 186 | 30 | 2 | 1 | 169 | 149 | 314 | 1.63e-74 | 229 |
| Msa1187530 | MtrunA17_Chr2g0313821 | 52.000 | 175 | 67 | 1 | 1 | 158 | 58 | 232 | 8.09e-57 | 186 |
| Msa1187530 | MtrunA17_Chr2g0313831 | 51.136 | 176 | 69 | 1 | 2 | 160 | 59 | 234 | 8.43e-57 | 186 |
| Msa1187530 | MtrunA17_Chr2g0313801 | 49.714 | 175 | 71 | 1 | 1 | 158 | 58 | 232 | 2.67e-56 | 185 |
| Msa1187530 | MtrunA17_Chr2g0313811 | 47.594 | 187 | 69 | 2 | 1 | 158 | 58 | 244 | 1.51e-54 | 180 |
| Msa1187530 | MtrunA17_Chr2g0313791 | 46.316 | 190 | 79 | 3 | 1 | 172 | 58 | 242 | 1.40e-53 | 177 |
| Msa1187530 | MtrunA17_Chr2g0313751 | 45.989 | 187 | 82 | 3 | 1 | 169 | 86 | 271 | 1.21e-52 | 176 |
| Msa1187530 | MtrunA17_Chr2g0313761 | 46.774 | 186 | 80 | 3 | 2 | 169 | 55 | 239 | 1.72e-52 | 174 |
| Msa1187530 | MtrunA17_Chr2g0307301 | 45.455 | 187 | 83 | 3 | 4 | 172 | 64 | 249 | 1.26e-51 | 172 |
| Msa1187530 | MtrunA17_Chr2g0313781 | 43.564 | 202 | 84 | 3 | 1 | 172 | 58 | 259 | 3.84e-51 | 171 |
| Msa1187530 | MtrunA17_Chr2g0313771 | 46.392 | 194 | 81 | 3 | 1 | 172 | 62 | 254 | 7.09e-50 | 168 |
| Msa1187530 | MtrunA17_Chr2g0307291 | 44.920 | 187 | 84 | 3 | 4 | 172 | 64 | 249 | 1.19e-49 | 167 |
| Msa1187530 | MtrunA17_Chr5g0446131 | 46.073 | 191 | 82 | 4 | 1 | 172 | 57 | 245 | 2.05e-49 | 167 |
| Msa1187530 | MtrunA17_Chr2g0288661 | 42.021 | 188 | 90 | 3 | 3 | 172 | 63 | 249 | 3.37e-42 | 147 |
| Msa1187530 | MtrunA17_Chr4g0014051 | 40.000 | 180 | 89 | 3 | 1 | 161 | 70 | 249 | 3.92e-41 | 145 |
| Msa1187530 | MtrunA17_Chr4g0063221 | 44.615 | 130 | 69 | 3 | 35 | 162 | 112 | 240 | 1.07e-26 | 105 |
| Msa1187530 | MtrunA17_Chr7g0262111 | 41.096 | 146 | 73 | 3 | 35 | 172 | 108 | 248 | 1.00e-23 | 97.1 |
| Msa1187530 | MtrunA17_Chr2g0307321 | 51.220 | 82 | 39 | 1 | 92 | 172 | 1 | 82 | 2.98e-23 | 89.0 |
| Msa1187530 | MtrunA17_Chr7g0235261 | 29.101 | 189 | 110 | 6 | 5 | 172 | 61 | 246 | 1.33e-17 | 79.7 |
| Msa1187530 | MtrunA17_Chr1g0154731 | 36.111 | 144 | 83 | 3 | 35 | 172 | 106 | 246 | 1.38e-16 | 76.6 |
| Msa1187530 | MtrunA17_Chr8g0362731 | 36.000 | 125 | 75 | 3 | 61 | 181 | 33 | 156 | 1.89e-16 | 75.9 |
| Msa1187530 | MtrunA17_Chr4g0004601 | 33.099 | 142 | 90 | 4 | 35 | 172 | 127 | 267 | 6.75e-16 | 74.7 |
| Msa1187530 | MtrunA17_Chr8g0336361 | 35.772 | 123 | 76 | 2 | 35 | 154 | 116 | 238 | 2.25e-15 | 73.2 |
| Msa1187530 | MtrunA17_Chr1g0193811 | 31.092 | 119 | 78 | 3 | 35 | 149 | 110 | 228 | 6.17e-14 | 68.9 |
| Msa1187530 | MtrunA17_Chr3g0128461 | 28.276 | 145 | 92 | 4 | 27 | 159 | 110 | 254 | 1.00e-13 | 68.6 |
| Msa1187530 | MtrunA17_Chr6g0457421 | 32.609 | 138 | 89 | 3 | 39 | 172 | 112 | 249 | 2.87e-13 | 67.0 |
| Msa1187530 | MtrunA17_Chr7g0215181 | 40.179 | 112 | 63 | 3 | 55 | 164 | 132 | 241 | 4.41e-13 | 66.6 |
| Msa1187530 | MtrunA17_Chr8g0364081 | 32.283 | 127 | 82 | 3 | 27 | 149 | 110 | 236 | 9.93e-13 | 65.5 |
| Msa1187530 | MtrunA17_Chr6g0472221 | 32.836 | 134 | 85 | 3 | 35 | 164 | 121 | 253 | 1.63e-12 | 64.7 |
| Msa1187530 | MtrunA17_Chr1g0203141 | 30.088 | 113 | 77 | 2 | 61 | 172 | 142 | 253 | 3.14e-12 | 63.9 |
| Msa1187530 | MtrunA17_Chr2g0307311 | 34.737 | 95 | 44 | 2 | 4 | 81 | 29 | 122 | 3.74e-12 | 60.8 |
| Msa1187530 | MtrunA17_Chr6g0479681 | 31.897 | 116 | 71 | 3 | 61 | 172 | 140 | 251 | 4.74e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1187530 | AT3G14620.1 | 45.161 | 186 | 83 | 3 | 6 | 172 | 68 | 253 | 1.17e-48 | 165 |
| Msa1187530 | AT3G14690.1 | 44.633 | 177 | 78 | 3 | 7 | 164 | 65 | 240 | 6.09e-46 | 157 |
| Msa1187530 | AT3G14690.2 | 44.633 | 177 | 78 | 3 | 7 | 164 | 100 | 275 | 1.30e-45 | 157 |
| Msa1187530 | AT3G14660.3 | 41.935 | 186 | 87 | 4 | 7 | 172 | 65 | 249 | 4.52e-45 | 153 |
| Msa1187530 | AT3G14640.1 | 43.011 | 186 | 86 | 3 | 7 | 172 | 65 | 250 | 1.67e-44 | 154 |
| Msa1187530 | AT3G14640.2 | 41.885 | 191 | 91 | 3 | 2 | 172 | 82 | 272 | 1.94e-44 | 154 |
| Msa1187530 | AT3G14660.1 | 41.935 | 186 | 87 | 4 | 7 | 172 | 65 | 249 | 4.23e-44 | 153 |
| Msa1187530 | AT3G14680.1 | 52.713 | 129 | 60 | 1 | 35 | 162 | 110 | 238 | 4.75e-43 | 150 |
| Msa1187530 | AT3G14650.1 | 41.341 | 179 | 87 | 3 | 4 | 164 | 62 | 240 | 8.40e-42 | 147 |
| Msa1187530 | AT3G14630.1 | 48.966 | 145 | 72 | 2 | 30 | 172 | 101 | 245 | 8.88e-40 | 141 |
| Msa1187530 | AT3G14610.1 | 37.895 | 190 | 99 | 3 | 2 | 172 | 59 | 248 | 9.23e-40 | 141 |
| Msa1187530 | AT3G14630.2 | 48.966 | 145 | 72 | 2 | 30 | 172 | 156 | 300 | 1.11e-39 | 142 |
| Msa1187530 | AT1G17060.1 | 45.038 | 131 | 72 | 0 | 35 | 165 | 112 | 242 | 3.62e-35 | 125 |
| Msa1187530 | AT2G26710.1 | 45.000 | 140 | 75 | 2 | 35 | 172 | 113 | 252 | 4.57e-31 | 117 |
| Msa1187530 | AT3G14660.2 | 46.512 | 86 | 44 | 2 | 89 | 172 | 18 | 103 | 6.49e-19 | 83.2 |
| Msa1187530 | AT1G75130.1 | 34.127 | 126 | 82 | 1 | 30 | 154 | 102 | 227 | 1.95e-17 | 79.3 |
| Msa1187530 | AT5G24910.1 | 35.644 | 101 | 63 | 1 | 55 | 153 | 142 | 242 | 6.85e-15 | 72.0 |
| Msa1187530 | AT5G24910.2 | 35.644 | 101 | 63 | 1 | 55 | 153 | 142 | 242 | 7.16e-15 | 72.0 |
| Msa1187530 | AT4G27710.1 | 34.831 | 89 | 57 | 1 | 61 | 148 | 140 | 228 | 1.02e-13 | 68.6 |
| Msa1187530 | AT4G27710.2 | 34.831 | 89 | 57 | 1 | 61 | 148 | 140 | 228 | 1.20e-13 | 68.2 |
| Msa1187530 | AT2G46960.2 | 31.707 | 123 | 77 | 3 | 35 | 150 | 110 | 232 | 1.57e-13 | 68.2 |
| Msa1187530 | AT2G46960.1 | 35.165 | 91 | 55 | 1 | 64 | 150 | 26 | 116 | 1.60e-13 | 68.2 |
| Msa1187530 | AT5G24900.2 | 30.579 | 121 | 78 | 2 | 55 | 173 | 21 | 137 | 6.77e-13 | 66.2 |
| Msa1187530 | AT5G24900.1 | 30.579 | 121 | 78 | 2 | 55 | 173 | 138 | 254 | 8.10e-13 | 66.2 |
| Msa1187530 | AT2G46950.1 | 36.634 | 101 | 60 | 2 | 51 | 150 | 188 | 285 | 3.18e-12 | 64.3 |
| Msa1187530 | AT5G52400.1 | 29.167 | 120 | 82 | 2 | 47 | 164 | 133 | 251 | 3.45e-12 | 64.3 |
| Msa1187530 | AT2G46950.2 | 36.634 | 101 | 60 | 2 | 51 | 150 | 188 | 285 | 3.91e-12 | 63.9 |
Find 35 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCCATTTCCAAGTATTT+TGG | 0.185600 | 8_1:-27422371 | Msa1187530:CDS |
| ATGACTATAATATATTATTT+TGG | 0.220872 | 8_1:-27421931 | Msa1187530:CDS |
| GATAGATGGTGCAACTTCTT+TGG | 0.289005 | 8_1:+27423596 | None:intergenic |
| CACAGACCCTGATCAAATTA+AGG | 0.326883 | 8_1:-27422435 | Msa1187530:intron |
| TTATAGTCATACCGCAATAT+TGG | 0.330539 | 8_1:+27421944 | None:intergenic |
| AAGACTTCCTTAATTTGATC+AGG | 0.347685 | 8_1:+27422428 | None:intergenic |
| CATCAAGCTGTACACAAATA+TGG | 0.350284 | 8_1:-27423561 | Msa1187530:intron |
| GTAATTTCTAGAACAGCATT+TGG | 0.387911 | 8_1:-27422052 | Msa1187530:CDS |
| ATTTACACTTATCTTCTTGT+TGG | 0.391812 | 8_1:+27423631 | None:intergenic |
| AACACCAAAATACTTGGAAA+TGG | 0.394891 | 8_1:+27422367 | None:intergenic |
| TAGCCCATTTCTCACCCTCT+AGG | 0.444005 | 8_1:+27422333 | None:intergenic |
| CACACCTAGAGGGTGAGAAA+TGG | 0.444754 | 8_1:-27422337 | Msa1187530:CDS |
| ATTTCAACTTCTAAAGAAGC+AGG | 0.445049 | 8_1:-27422002 | Msa1187530:CDS |
| GAACATGTGAGCTTGATGTT+TGG | 0.456813 | 8_1:-27422102 | Msa1187530:CDS |
| GGAAGTCTTTAACAAGATCA+AGG | 0.465885 | 8_1:-27422414 | Msa1187530:CDS |
| ACACCTAGAGGGTGAGAAAT+GGG | 0.472998 | 8_1:-27422336 | Msa1187530:CDS |
| TGAAGAGGTGAGAAGATAGA+TGG | 0.483390 | 8_1:+27423582 | None:intergenic |
| ACATCGAAAGATAGTCAATC+CGG | 0.494202 | 8_1:-27422309 | Msa1187530:CDS |
| TATACCAACACCAAAATACT+TGG | 0.519483 | 8_1:+27422361 | None:intergenic |
| GCAATGAAATGATAAGCAAA+TGG | 0.519697 | 8_1:-27422147 | Msa1187530:CDS |
| GAAGATAAGTGTAAATCCAT+TGG | 0.534390 | 8_1:-27423624 | Msa1187530:CDS |
| CATGTCAAATTCTGAAGGAA+AGG | 0.546715 | 8_1:+27422079 | None:intergenic |
| AGACTTCCTTAATTTGATCA+GGG | 0.547319 | 8_1:+27422429 | None:intergenic |
| AACTTCTTTGGTGAGACCAA+TGG | 0.558077 | 8_1:+27423608 | None:intergenic |
| AAAGGATTATTGTCATCAGA+TGG | 0.562183 | 8_1:-27422124 | Msa1187530:CDS |
| TTTCAACTTCTAAAGAAGCA+GGG | 0.564584 | 8_1:-27422001 | Msa1187530:CDS |
| CATCACATGTCAAATTCTGA+AGG | 0.582232 | 8_1:+27422074 | None:intergenic |
| TTGTGTACAGCTTGATGAAG+AGG | 0.584589 | 8_1:+27423567 | None:intergenic |
| TTGCAACTGTAAGAAAATGC+AGG | 0.592722 | 8_1:+27422166 | None:intergenic |
| TTTGGAAGCAGCTATGCAGA+AGG | 0.613215 | 8_1:-27422034 | Msa1187530:CDS |
| GAAATGATAAGCAAATGGAA+AGG | 0.626989 | 8_1:-27422142 | Msa1187530:CDS |
| GCACGAACATTCCAATATTG+CGG | 0.638481 | 8_1:-27421955 | Msa1187530:CDS |
| GTTGGTATAGCACACCTAGA+GGG | 0.666418 | 8_1:-27422347 | Msa1187530:CDS |
| AATATTGGAATGTTCGTGCG+TGG | 0.674030 | 8_1:+27421959 | None:intergenic |
| TGTTGGTATAGCACACCTAG+AGG | 0.689668 | 8_1:-27422348 | Msa1187530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGACTATAATATATTATTT+TGG | - | chr8_1:27423633-27423652 | Msa1187530:CDS | 10.0% |
| !!! | ATGACTATAATATATTATTT+TGG | - | chr8_1:27423633-27423652 | Msa1187530:CDS | 10.0% |
| !!! | TCAATTTTAATTGTTATTGA+TGG | - | chr8_1:27422063-27422082 | Msa1187530:CDS | 15.0% |
| !!! | TTGTAATTTTTTTTCTTAGA+GGG | + | chr8_1:27422200-27422219 | None:intergenic | 15.0% |
| !!! | TTTGTAATTTTTTTTCTTAG+AGG | + | chr8_1:27422201-27422220 | None:intergenic | 15.0% |
| !!! | TCAATTTTAATTGTTATTGA+TGG | - | chr8_1:27422063-27422082 | Msa1187530:CDS | 15.0% |
| !!! | TTGTAATTTTTTTTCTTAGA+GGG | + | chr8_1:27422200-27422219 | None:intergenic | 15.0% |
| !!! | TTTGTAATTTTTTTTCTTAG+AGG | + | chr8_1:27422201-27422220 | None:intergenic | 15.0% |
| !!! | TCATTGTTGTTTATTAATAC+TGG | - | chr8_1:27422125-27422144 | Msa1187530:CDS | 20.0% |
| !!! | CATTGTTGTTTATTAATACT+GGG | - | chr8_1:27422126-27422145 | Msa1187530:CDS | 20.0% |
| !!! | ATTTTTATTTTTTGCCTTGA+GGG | + | chr8_1:27422260-27422279 | None:intergenic | 20.0% |
| !!! | TATTTTTATTTTTTGCCTTG+AGG | + | chr8_1:27422261-27422280 | None:intergenic | 20.0% |
| !! | TCCATTATAAGATAGTATTA+AGG | + | chr8_1:27422461-27422480 | None:intergenic | 20.0% |
| !! | AATCAAATTAACCATTAGTA+AGG | - | chr8_1:27422542-27422561 | Msa1187530:intron | 20.0% |
| !!! | AAAGTTTTAAAAAGTGTTTG+TGG | + | chr8_1:27422672-27422691 | None:intergenic | 20.0% |
| !! | TTATACAAGTATATCTACAA+GGG | + | chr8_1:27422742-27422761 | None:intergenic | 20.0% |
| !! | ATTATACAAGTATATCTACA+AGG | + | chr8_1:27422743-27422762 | None:intergenic | 20.0% |
| !!! | AATTTGTTGTTCTAACATAA+AGG | - | chr8_1:27423048-27423067 | Msa1187530:intron | 20.0% |
| !!! | TTACTTTCAATTTTTCAATG+TGG | + | chr8_1:27423285-27423304 | None:intergenic | 20.0% |
| !! | ACATTGAAAAATTGAAAGTA+AGG | - | chr8_1:27423284-27423303 | Msa1187530:intron | 20.0% |
| !! | TATGATTTACATTATACTGT+AGG | - | chr8_1:27423367-27423386 | Msa1187530:intron | 20.0% |
| !! | ATGATTTACATTATACTGTA+GGG | - | chr8_1:27423368-27423387 | Msa1187530:intron | 20.0% |
| !!! | TCATTGTTGTTTATTAATAC+TGG | - | chr8_1:27422125-27422144 | Msa1187530:CDS | 20.0% |
| !!! | CATTGTTGTTTATTAATACT+GGG | - | chr8_1:27422126-27422145 | Msa1187530:CDS | 20.0% |
| !!! | ATTTTTATTTTTTGCCTTGA+GGG | + | chr8_1:27422260-27422279 | None:intergenic | 20.0% |
| !!! | TATTTTTATTTTTTGCCTTG+AGG | + | chr8_1:27422261-27422280 | None:intergenic | 20.0% |
| !! | TCCATTATAAGATAGTATTA+AGG | + | chr8_1:27422461-27422480 | None:intergenic | 20.0% |
| !! | AATCAAATTAACCATTAGTA+AGG | - | chr8_1:27422542-27422561 | Msa1187530:intron | 20.0% |
| !!! | AAAGTTTTAAAAAGTGTTTG+TGG | + | chr8_1:27422672-27422691 | None:intergenic | 20.0% |
| !! | TTATACAAGTATATCTACAA+GGG | + | chr8_1:27422742-27422761 | None:intergenic | 20.0% |
| !! | ATTATACAAGTATATCTACA+AGG | + | chr8_1:27422743-27422762 | None:intergenic | 20.0% |
| !!! | AATTTGTTGTTCTAACATAA+AGG | - | chr8_1:27423048-27423067 | Msa1187530:intron | 20.0% |
| !!! | TTACTTTCAATTTTTCAATG+TGG | + | chr8_1:27423285-27423304 | None:intergenic | 20.0% |
| !! | ACATTGAAAAATTGAAAGTA+AGG | - | chr8_1:27423284-27423303 | Msa1187530:intron | 20.0% |
| !! | TATGATTTACATTATACTGT+AGG | - | chr8_1:27423367-27423386 | Msa1187530:intron | 20.0% |
| !! | ATGATTTACATTATACTGTA+GGG | - | chr8_1:27423368-27423387 | Msa1187530:intron | 20.0% |
| ! | ATTTACACTTATCTTCTTGT+TGG | + | chr8_1:27421936-27421955 | None:intergenic | 25.0% |
| !!! | GGTTTTGTAGTTTTTTTCTT+AGG | - | chr8_1:27422384-27422403 | Msa1187530:CDS | 25.0% |
| ! | GCCTTAATACTATCTTATAA+TGG | - | chr8_1:27422457-27422476 | Msa1187530:intron | 25.0% |
| ! | AGAAACAAATTCCTTACTAA+TGG | + | chr8_1:27422556-27422575 | None:intergenic | 25.0% |
| ! | GTTTATCTATCTGTTTACTT+TGG | - | chr8_1:27423015-27423034 | Msa1187530:intron | 25.0% |
| ! | AACATAAAGGATATATATGC+AGG | - | chr8_1:27423061-27423080 | Msa1187530:intron | 25.0% |
| !! | AGGAAAGAATTCCTTTTTAT+GGG | - | chr8_1:27423081-27423100 | Msa1187530:intron | 25.0% |
| !! | AAATCCATTTCCAAGTATTT+TGG | - | chr8_1:27423193-27423212 | Msa1187530:intron | 25.0% |
| ! | ATTTACACTTATCTTCTTGT+TGG | + | chr8_1:27421936-27421955 | None:intergenic | 25.0% |
| !!! | GGTTTTGTAGTTTTTTTCTT+AGG | - | chr8_1:27422384-27422403 | Msa1187530:CDS | 25.0% |
| ! | GCCTTAATACTATCTTATAA+TGG | - | chr8_1:27422457-27422476 | Msa1187530:intron | 25.0% |
| ! | AGAAACAAATTCCTTACTAA+TGG | + | chr8_1:27422556-27422575 | None:intergenic | 25.0% |
| ! | GTTTATCTATCTGTTTACTT+TGG | - | chr8_1:27423015-27423034 | Msa1187530:intron | 25.0% |
| ! | AACATAAAGGATATATATGC+AGG | - | chr8_1:27423061-27423080 | Msa1187530:intron | 25.0% |
| !! | AGGAAAGAATTCCTTTTTAT+GGG | - | chr8_1:27423081-27423100 | Msa1187530:intron | 25.0% |
| !! | AAATCCATTTCCAAGTATTT+TGG | - | chr8_1:27423193-27423212 | Msa1187530:intron | 25.0% |
| GAAGATAAGTGTAAATCCAT+TGG | - | chr8_1:27421940-27421959 | Msa1187530:CDS | 30.0% | |
| ! | CTTTCACAAAGTTGTGATTT+TGG | + | chr8_1:27422412-27422431 | None:intergenic | 30.0% |
| ATCACAACTTTGTGAAAGTT+AGG | - | chr8_1:27422414-27422433 | Msa1187530:CDS | 30.0% | |
| GTTTCTTCATAATTGTGTTG+CGG | - | chr8_1:27422570-27422589 | Msa1187530:intron | 30.0% | |
| TATCTCTTCAATCTCAATTG+AGG | + | chr8_1:27422616-27422635 | None:intergenic | 30.0% | |
| TGACATGATTCTCAACTAAA+AGG | - | chr8_1:27422703-27422722 | Msa1187530:intron | 30.0% | |
| AATGTAAACTAAACTCCTCT+AGG | + | chr8_1:27422786-27422805 | None:intergenic | 30.0% | |
| AGTTTACATTATCAGATGCA+AGG | - | chr8_1:27422796-27422815 | Msa1187530:intron | 30.0% | |
| ! | CAGGAAAGAATTCCTTTTTA+TGG | - | chr8_1:27423080-27423099 | Msa1187530:intron | 30.0% |
| ! | AAGAATTCCTTTTTATGGGA+CGG | - | chr8_1:27423085-27423104 | Msa1187530:intron | 30.0% |
| ! | AGACTTCCTTAATTTGATCA+GGG | + | chr8_1:27423138-27423157 | None:intergenic | 30.0% |
| ! | AAGACTTCCTTAATTTGATC+AGG | + | chr8_1:27423139-27423158 | None:intergenic | 30.0% |
| !!! | ATGGATTTTAACTCTGGTTT+GGG | + | chr8_1:27423181-27423200 | None:intergenic | 30.0% |
| !!! | AATGGATTTTAACTCTGGTT+TGG | + | chr8_1:27423182-27423201 | None:intergenic | 30.0% |
| !!! | TTGGAAATGGATTTTAACTC+TGG | + | chr8_1:27423187-27423206 | None:intergenic | 30.0% |
| AACACCAAAATACTTGGAAA+TGG | + | chr8_1:27423200-27423219 | None:intergenic | 30.0% | |
| !!! | ATTTCCAAGTATTTTGGTGT+TGG | - | chr8_1:27423199-27423218 | Msa1187530:intron | 30.0% |
| TATACCAACACCAAAATACT+TGG | + | chr8_1:27423206-27423225 | None:intergenic | 30.0% | |
| !! | AATTTTTCAATGTGGAATGC+CGG | + | chr8_1:27423277-27423296 | None:intergenic | 30.0% |
| GCAATGAAATGATAAGCAAA+TGG | - | chr8_1:27423417-27423436 | Msa1187530:intron | 30.0% | |
| GAAATGATAAGCAAATGGAA+AGG | - | chr8_1:27423422-27423441 | Msa1187530:intron | 30.0% | |
| AAAGGATTATTGTCATCAGA+TGG | - | chr8_1:27423440-27423459 | Msa1187530:intron | 30.0% | |
| !! | GTAATTTCTAGAACAGCATT+TGG | - | chr8_1:27423512-27423531 | Msa1187530:intron | 30.0% |
| ! | ATTTCAACTTCTAAAGAAGC+AGG | - | chr8_1:27423562-27423581 | Msa1187530:CDS | 30.0% |
| ! | TTTCAACTTCTAAAGAAGCA+GGG | - | chr8_1:27423563-27423582 | Msa1187530:CDS | 30.0% |
| TTATAGTCATACCGCAATAT+TGG | + | chr8_1:27423623-27423642 | None:intergenic | 30.0% | |
| GAAGATAAGTGTAAATCCAT+TGG | - | chr8_1:27421940-27421959 | Msa1187530:CDS | 30.0% | |
| ! | CTTTCACAAAGTTGTGATTT+TGG | + | chr8_1:27422412-27422431 | None:intergenic | 30.0% |
| ATCACAACTTTGTGAAAGTT+AGG | - | chr8_1:27422414-27422433 | Msa1187530:CDS | 30.0% | |
| GTTTCTTCATAATTGTGTTG+CGG | - | chr8_1:27422570-27422589 | Msa1187530:intron | 30.0% | |
| TATCTCTTCAATCTCAATTG+AGG | + | chr8_1:27422616-27422635 | None:intergenic | 30.0% | |
| TGACATGATTCTCAACTAAA+AGG | - | chr8_1:27422703-27422722 | Msa1187530:intron | 30.0% | |
| AATGTAAACTAAACTCCTCT+AGG | + | chr8_1:27422786-27422805 | None:intergenic | 30.0% | |
| AGTTTACATTATCAGATGCA+AGG | - | chr8_1:27422796-27422815 | Msa1187530:intron | 30.0% | |
| ! | CAGGAAAGAATTCCTTTTTA+TGG | - | chr8_1:27423080-27423099 | Msa1187530:intron | 30.0% |
| ! | AAGAATTCCTTTTTATGGGA+CGG | - | chr8_1:27423085-27423104 | Msa1187530:intron | 30.0% |
| ! | AGACTTCCTTAATTTGATCA+GGG | + | chr8_1:27423138-27423157 | None:intergenic | 30.0% |
| ! | AAGACTTCCTTAATTTGATC+AGG | + | chr8_1:27423139-27423158 | None:intergenic | 30.0% |
| !!! | ATGGATTTTAACTCTGGTTT+GGG | + | chr8_1:27423181-27423200 | None:intergenic | 30.0% |
| !!! | AATGGATTTTAACTCTGGTT+TGG | + | chr8_1:27423182-27423201 | None:intergenic | 30.0% |
| !!! | TTGGAAATGGATTTTAACTC+TGG | + | chr8_1:27423187-27423206 | None:intergenic | 30.0% |
| AACACCAAAATACTTGGAAA+TGG | + | chr8_1:27423200-27423219 | None:intergenic | 30.0% | |
| !!! | ATTTCCAAGTATTTTGGTGT+TGG | - | chr8_1:27423199-27423218 | Msa1187530:intron | 30.0% |
| TATACCAACACCAAAATACT+TGG | + | chr8_1:27423206-27423225 | None:intergenic | 30.0% | |
| !! | AATTTTTCAATGTGGAATGC+CGG | + | chr8_1:27423277-27423296 | None:intergenic | 30.0% |
| GCAATGAAATGATAAGCAAA+TGG | - | chr8_1:27423417-27423436 | Msa1187530:intron | 30.0% | |
| GAAATGATAAGCAAATGGAA+AGG | - | chr8_1:27423422-27423441 | Msa1187530:intron | 30.0% | |
| AAAGGATTATTGTCATCAGA+TGG | - | chr8_1:27423440-27423459 | Msa1187530:intron | 30.0% | |
| !! | GTAATTTCTAGAACAGCATT+TGG | - | chr8_1:27423512-27423531 | Msa1187530:intron | 30.0% |
| ! | ATTTCAACTTCTAAAGAAGC+AGG | - | chr8_1:27423562-27423581 | Msa1187530:CDS | 30.0% |
| ! | TTTCAACTTCTAAAGAAGCA+GGG | - | chr8_1:27423563-27423582 | Msa1187530:CDS | 30.0% |
| TTATAGTCATACCGCAATAT+TGG | + | chr8_1:27423623-27423642 | None:intergenic | 30.0% | |
| CATCAAGCTGTACACAAATA+TGG | - | chr8_1:27422003-27422022 | Msa1187530:CDS | 35.0% | |
| ! | TGATGGTACTTTACCGATTA+TGG | - | chr8_1:27422080-27422099 | Msa1187530:CDS | 35.0% |
| TCGCAACTTCGTAAAAGTTA+GGG | + | chr8_1:27422171-27422190 | None:intergenic | 35.0% | |
| ATCGCAACTTCGTAAAAGTT+AGG | + | chr8_1:27422172-27422191 | None:intergenic | 35.0% | |
| TGCTACAGTTGCAAAACTTA+GGG | + | chr8_1:27422230-27422249 | None:intergenic | 35.0% | |
| ! | TTTTGCAACTGTAGCAGTTA+TGG | - | chr8_1:27422234-27422253 | Msa1187530:intron | 35.0% |
| ! | ACCGAGTCAAAATTGACTTT+GGG | - | chr8_1:27422327-27422346 | Msa1187530:CDS | 35.0% |
| !!! | TCCCAAAGTCAATTTTGACT+CGG | + | chr8_1:27422331-27422350 | None:intergenic | 35.0% |
| ACAACTTTGTGAAAGTTAGG+TGG | - | chr8_1:27422417-27422436 | Msa1187530:CDS | 35.0% | |
| CAACTTTGTGAAAGTTAGGT+GGG | - | chr8_1:27422418-27422437 | Msa1187530:CDS | 35.0% | |
| ! | CTAGAGCATCTTATCATGTT+TGG | + | chr8_1:27422823-27422842 | None:intergenic | 35.0% |
| !! | CTATCTGTTTACTTTGGAGT+CGG | - | chr8_1:27423021-27423040 | Msa1187530:intron | 35.0% |
| !! | TATCTGTTTACTTTGGAGTC+GGG | - | chr8_1:27423022-27423041 | Msa1187530:intron | 35.0% |
| GGAAGTCTTTAACAAGATCA+AGG | - | chr8_1:27423150-27423169 | Msa1187530:intron | 35.0% | |
| !!! | TGGATTTTAACTCTGGTTTG+GGG | + | chr8_1:27423180-27423199 | None:intergenic | 35.0% |
| ACATCGAAAGATAGTCAATC+CGG | - | chr8_1:27423255-27423274 | Msa1187530:intron | 35.0% | |
| TTGCAACTGTAAGAAAATGC+AGG | + | chr8_1:27423401-27423420 | None:intergenic | 35.0% | |
| ! | CATGTCAAATTCTGAAGGAA+AGG | + | chr8_1:27423488-27423507 | None:intergenic | 35.0% |
| CATCACATGTCAAATTCTGA+AGG | + | chr8_1:27423493-27423512 | None:intergenic | 35.0% | |
| CATCAAGCTGTACACAAATA+TGG | - | chr8_1:27422003-27422022 | Msa1187530:CDS | 35.0% | |
| ! | TGATGGTACTTTACCGATTA+TGG | - | chr8_1:27422080-27422099 | Msa1187530:CDS | 35.0% |
| TCGCAACTTCGTAAAAGTTA+GGG | + | chr8_1:27422171-27422190 | None:intergenic | 35.0% | |
| ATCGCAACTTCGTAAAAGTT+AGG | + | chr8_1:27422172-27422191 | None:intergenic | 35.0% | |
| TGCTACAGTTGCAAAACTTA+GGG | + | chr8_1:27422230-27422249 | None:intergenic | 35.0% | |
| ! | TTTTGCAACTGTAGCAGTTA+TGG | - | chr8_1:27422234-27422253 | Msa1187530:intron | 35.0% |
| ! | ACCGAGTCAAAATTGACTTT+GGG | - | chr8_1:27422327-27422346 | Msa1187530:CDS | 35.0% |
| !!! | TCCCAAAGTCAATTTTGACT+CGG | + | chr8_1:27422331-27422350 | None:intergenic | 35.0% |
| ACAACTTTGTGAAAGTTAGG+TGG | - | chr8_1:27422417-27422436 | Msa1187530:CDS | 35.0% | |
| CAACTTTGTGAAAGTTAGGT+GGG | - | chr8_1:27422418-27422437 | Msa1187530:CDS | 35.0% | |
| ! | CTAGAGCATCTTATCATGTT+TGG | + | chr8_1:27422823-27422842 | None:intergenic | 35.0% |
| !! | CTATCTGTTTACTTTGGAGT+CGG | - | chr8_1:27423021-27423040 | Msa1187530:intron | 35.0% |
| !! | TATCTGTTTACTTTGGAGTC+GGG | - | chr8_1:27423022-27423041 | Msa1187530:intron | 35.0% |
| GGAAGTCTTTAACAAGATCA+AGG | - | chr8_1:27423150-27423169 | Msa1187530:intron | 35.0% | |
| !!! | TGGATTTTAACTCTGGTTTG+GGG | + | chr8_1:27423180-27423199 | None:intergenic | 35.0% |
| ACATCGAAAGATAGTCAATC+CGG | - | chr8_1:27423255-27423274 | Msa1187530:intron | 35.0% | |
| TTGCAACTGTAAGAAAATGC+AGG | + | chr8_1:27423401-27423420 | None:intergenic | 35.0% | |
| ! | CATGTCAAATTCTGAAGGAA+AGG | + | chr8_1:27423488-27423507 | None:intergenic | 35.0% |
| CATCACATGTCAAATTCTGA+AGG | + | chr8_1:27423493-27423512 | None:intergenic | 35.0% | |
| AACTTCTTTGGTGAGACCAA+TGG | + | chr8_1:27421959-27421978 | None:intergenic | 40.0% | |
| GATAGATGGTGCAACTTCTT+TGG | + | chr8_1:27421971-27421990 | None:intergenic | 40.0% | |
| TGAAGAGGTGAGAAGATAGA+TGG | + | chr8_1:27421985-27422004 | None:intergenic | 40.0% | |
| TTGTGTACAGCTTGATGAAG+AGG | + | chr8_1:27422000-27422019 | None:intergenic | 40.0% | |
| ! | ACTTTACCGATTATGGTCGT+TGG | - | chr8_1:27422087-27422106 | Msa1187530:CDS | 40.0% |
| ! | CTTTACCGATTATGGTCGTT+GGG | - | chr8_1:27422088-27422107 | Msa1187530:CDS | 40.0% |
| ! | TTTACCGATTATGGTCGTTG+GGG | - | chr8_1:27422089-27422108 | Msa1187530:CDS | 40.0% |
| AATTCCCCAACGACCATAAT+CGG | + | chr8_1:27422096-27422115 | None:intergenic | 40.0% | |
| CGCAACTTCGTAAAAGTTAG+GGG | + | chr8_1:27422170-27422189 | None:intergenic | 40.0% | |
| CTACAGTTGCAAAACTTAGG+GGG | + | chr8_1:27422228-27422247 | None:intergenic | 40.0% | |
| GCTACAGTTGCAAAACTTAG+GGG | + | chr8_1:27422229-27422248 | None:intergenic | 40.0% | |
| CTGCTACAGTTGCAAAACTT+AGG | + | chr8_1:27422231-27422250 | None:intergenic | 40.0% | |
| ! | GACCGAGTCAAAATTGACTT+TGG | - | chr8_1:27422326-27422345 | Msa1187530:CDS | 40.0% |
| ! | TTTTGCAACTGTGGCAGTTT+TGG | + | chr8_1:27422354-27422373 | None:intergenic | 40.0% |
| TGCCACAGTTGCAAAACTTA+GGG | - | chr8_1:27422358-27422377 | Msa1187530:CDS | 40.0% | |
| !!! | TGTGGCTGTGATTTTAGTTG+CGG | + | chr8_1:27422654-27422673 | None:intergenic | 40.0% |
| AGAAAAAAGCAGAGTCCTAG+AGG | - | chr8_1:27422768-27422787 | Msa1187530:intron | 40.0% | |
| AATAGAGCAAGTAGAGCTGA+AGG | - | chr8_1:27422846-27422865 | Msa1187530:intron | 40.0% | |
| CTCAGATACGTAGACACAAT+TGG | - | chr8_1:27422958-27422977 | Msa1187530:intron | 40.0% | |
| GGGTCTGTGATGATAACATT+TGG | + | chr8_1:27423118-27423137 | None:intergenic | 40.0% | |
| CACAGACCCTGATCAAATTA+AGG | - | chr8_1:27423129-27423148 | Msa1187530:intron | 40.0% | |
| GAACATGTGAGCTTGATGTT+TGG | - | chr8_1:27423462-27423481 | Msa1187530:intron | 40.0% | |
| AATATTGGAATGTTCGTGCG+TGG | + | chr8_1:27423608-27423627 | None:intergenic | 40.0% | |
| GCACGAACATTCCAATATTG+CGG | - | chr8_1:27423609-27423628 | Msa1187530:CDS | 40.0% | |
| AACTTCTTTGGTGAGACCAA+TGG | + | chr8_1:27421959-27421978 | None:intergenic | 40.0% | |
| GATAGATGGTGCAACTTCTT+TGG | + | chr8_1:27421971-27421990 | None:intergenic | 40.0% | |
| TGAAGAGGTGAGAAGATAGA+TGG | + | chr8_1:27421985-27422004 | None:intergenic | 40.0% | |
| TTGTGTACAGCTTGATGAAG+AGG | + | chr8_1:27422000-27422019 | None:intergenic | 40.0% | |
| ! | ACTTTACCGATTATGGTCGT+TGG | - | chr8_1:27422087-27422106 | Msa1187530:CDS | 40.0% |
| ! | CTTTACCGATTATGGTCGTT+GGG | - | chr8_1:27422088-27422107 | Msa1187530:CDS | 40.0% |
| ! | TTTACCGATTATGGTCGTTG+GGG | - | chr8_1:27422089-27422108 | Msa1187530:CDS | 40.0% |
| AATTCCCCAACGACCATAAT+CGG | + | chr8_1:27422096-27422115 | None:intergenic | 40.0% | |
| CGCAACTTCGTAAAAGTTAG+GGG | + | chr8_1:27422170-27422189 | None:intergenic | 40.0% | |
| CTACAGTTGCAAAACTTAGG+GGG | + | chr8_1:27422228-27422247 | None:intergenic | 40.0% | |
| GCTACAGTTGCAAAACTTAG+GGG | + | chr8_1:27422229-27422248 | None:intergenic | 40.0% | |
| CTGCTACAGTTGCAAAACTT+AGG | + | chr8_1:27422231-27422250 | None:intergenic | 40.0% | |
| ! | GACCGAGTCAAAATTGACTT+TGG | - | chr8_1:27422326-27422345 | Msa1187530:CDS | 40.0% |
| ! | TTTTGCAACTGTGGCAGTTT+TGG | + | chr8_1:27422354-27422373 | None:intergenic | 40.0% |
| TGCCACAGTTGCAAAACTTA+GGG | - | chr8_1:27422358-27422377 | Msa1187530:CDS | 40.0% | |
| !!! | TGTGGCTGTGATTTTAGTTG+CGG | + | chr8_1:27422654-27422673 | None:intergenic | 40.0% |
| AGAAAAAAGCAGAGTCCTAG+AGG | - | chr8_1:27422768-27422787 | Msa1187530:intron | 40.0% | |
| AATAGAGCAAGTAGAGCTGA+AGG | - | chr8_1:27422846-27422865 | Msa1187530:intron | 40.0% | |
| CTCAGATACGTAGACACAAT+TGG | - | chr8_1:27422958-27422977 | Msa1187530:intron | 40.0% | |
| GGGTCTGTGATGATAACATT+TGG | + | chr8_1:27423118-27423137 | None:intergenic | 40.0% | |
| CACAGACCCTGATCAAATTA+AGG | - | chr8_1:27423129-27423148 | Msa1187530:intron | 40.0% | |
| GAACATGTGAGCTTGATGTT+TGG | - | chr8_1:27423462-27423481 | Msa1187530:intron | 40.0% | |
| AATATTGGAATGTTCGTGCG+TGG | + | chr8_1:27423608-27423627 | None:intergenic | 40.0% | |
| GCACGAACATTCCAATATTG+CGG | - | chr8_1:27423609-27423628 | Msa1187530:CDS | 40.0% | |
| TAACACGTAGCACCTCACTT+AGG | - | chr8_1:27422287-27422306 | Msa1187530:CDS | 45.0% | |
| AACACGTAGCACCTCACTTA+GGG | - | chr8_1:27422288-27422307 | Msa1187530:CDS | 45.0% | |
| CTGCCACAGTTGCAAAACTT+AGG | - | chr8_1:27422357-27422376 | Msa1187530:CDS | 45.0% | |
| GCCACAGTTGCAAAACTTAG+GGG | - | chr8_1:27422359-27422378 | Msa1187530:CDS | 45.0% | |
| CCACAGTTGCAAAACTTAGG+GGG | - | chr8_1:27422360-27422379 | Msa1187530:CDS | 45.0% | |
| CGGTGAATTGCTAGTAGATG+CGG | - | chr8_1:27422590-27422609 | Msa1187530:intron | 45.0% | |
| CTACGTATCTGAGAGCAAAG+TGG | + | chr8_1:27422951-27422970 | None:intergenic | 45.0% | |
| TGTTGCACCGTCCCATAAAA+AGG | + | chr8_1:27423095-27423114 | None:intergenic | 45.0% | |
| TGTTGGTATAGCACACCTAG+AGG | - | chr8_1:27423216-27423235 | Msa1187530:intron | 45.0% | |
| GTTGGTATAGCACACCTAGA+GGG | - | chr8_1:27423217-27423236 | Msa1187530:intron | 45.0% | |
| ACACCTAGAGGGTGAGAAAT+GGG | - | chr8_1:27423228-27423247 | Msa1187530:intron | 45.0% | |
| TTTGGAAGCAGCTATGCAGA+AGG | - | chr8_1:27423530-27423549 | Msa1187530:intron | 45.0% | |
| TAACACGTAGCACCTCACTT+AGG | - | chr8_1:27422287-27422306 | Msa1187530:CDS | 45.0% | |
| AACACGTAGCACCTCACTTA+GGG | - | chr8_1:27422288-27422307 | Msa1187530:CDS | 45.0% | |
| CTGCCACAGTTGCAAAACTT+AGG | - | chr8_1:27422357-27422376 | Msa1187530:CDS | 45.0% | |
| GCCACAGTTGCAAAACTTAG+GGG | - | chr8_1:27422359-27422378 | Msa1187530:CDS | 45.0% | |
| CCACAGTTGCAAAACTTAGG+GGG | - | chr8_1:27422360-27422379 | Msa1187530:CDS | 45.0% | |
| CGGTGAATTGCTAGTAGATG+CGG | - | chr8_1:27422590-27422609 | Msa1187530:intron | 45.0% | |
| CTACGTATCTGAGAGCAAAG+TGG | + | chr8_1:27422951-27422970 | None:intergenic | 45.0% | |
| TGTTGCACCGTCCCATAAAA+AGG | + | chr8_1:27423095-27423114 | None:intergenic | 45.0% | |
| TGTTGGTATAGCACACCTAG+AGG | - | chr8_1:27423216-27423235 | Msa1187530:intron | 45.0% | |
| GTTGGTATAGCACACCTAGA+GGG | - | chr8_1:27423217-27423236 | Msa1187530:intron | 45.0% | |
| ACACCTAGAGGGTGAGAAAT+GGG | - | chr8_1:27423228-27423247 | Msa1187530:intron | 45.0% | |
| TTTGGAAGCAGCTATGCAGA+AGG | - | chr8_1:27423530-27423549 | Msa1187530:intron | 45.0% | |
| TGTAGCAGTTATGGCCCTCA+AGG | - | chr8_1:27422243-27422262 | Msa1187530:intron | 50.0% | |
| ! | CCCCCTAAGTTTTGCAACTG+TGG | + | chr8_1:27422225-27422244 | None:intergenic | 50.0% |
| CAGTTGCAAAACTTAGGGGG+CGG | - | chr8_1:27422363-27422382 | Msa1187530:CDS | 50.0% | |
| ! | TGAAGGCACAACATGCGTAG+CGG | - | chr8_1:27422863-27422882 | Msa1187530:intron | 50.0% |
| CACACCTAGAGGGTGAGAAA+TGG | - | chr8_1:27423227-27423246 | Msa1187530:intron | 50.0% | |
| TAGCCCATTTCTCACCCTCT+AGG | + | chr8_1:27423234-27423253 | None:intergenic | 50.0% | |
| TGTAGCAGTTATGGCCCTCA+AGG | - | chr8_1:27422243-27422262 | Msa1187530:intron | 50.0% | |
| ! | CCCCCTAAGTTTTGCAACTG+TGG | + | chr8_1:27422225-27422244 | None:intergenic | 50.0% |
| CAGTTGCAAAACTTAGGGGG+CGG | - | chr8_1:27422363-27422382 | Msa1187530:CDS | 50.0% | |
| ! | TGAAGGCACAACATGCGTAG+CGG | - | chr8_1:27422863-27422882 | Msa1187530:intron | 50.0% |
| CACACCTAGAGGGTGAGAAA+TGG | - | chr8_1:27423227-27423246 | Msa1187530:intron | 50.0% | |
| TAGCCCATTTCTCACCCTCT+AGG | + | chr8_1:27423234-27423253 | None:intergenic | 50.0% | |
| !! | TGACTCGGTCTATGCTGACG+TGG | + | chr8_1:27422316-27422335 | None:intergenic | 55.0% |
| !! | TGACTCGGTCTATGCTGACG+TGG | + | chr8_1:27422316-27422335 | None:intergenic | 55.0% |
| CTGACGTGGCACCCTAAGTG+AGG | + | chr8_1:27422302-27422321 | None:intergenic | 60.0% | |
| CTGACGTGGCACCCTAAGTG+AGG | + | chr8_1:27422302-27422321 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 27421922 | 27423664 | 27421922 | ID=Msa1187530;Name=Msa1187530 |
| chr8_1 | mRNA | 27421922 | 27423664 | 27421922 | ID=Msa1187530-mRNA-1;Parent=Msa1187530;Name=Msa1187530-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|1|1|3|0|181 |
| chr8_1 | exon | 27423562 | 27423664 | 27423562 | ID=Msa1187530-mRNA-1:exon:9606;Parent=Msa1187530-mRNA-1 |
| chr8_1 | exon | 27422286 | 27422452 | 27422286 | ID=Msa1187530-mRNA-1:exon:9605;Parent=Msa1187530-mRNA-1 |
| chr8_1 | exon | 27421922 | 27422197 | 27421922 | ID=Msa1187530-mRNA-1:exon:9604;Parent=Msa1187530-mRNA-1 |
| chr8_1 | CDS | 27423562 | 27423664 | 27423562 | ID=Msa1187530-mRNA-1:cds;Parent=Msa1187530-mRNA-1 |
| chr8_1 | CDS | 27422286 | 27422452 | 27422286 | ID=Msa1187530-mRNA-1:cds;Parent=Msa1187530-mRNA-1 |
| chr8_1 | CDS | 27421922 | 27422197 | 27421922 | ID=Msa1187530-mRNA-1:cds;Parent=Msa1187530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
