Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0271040 | XP_013457978.1 | 73.598 | 731 | 170 | 6 | 65 | 776 | 150 | 876 | 0.0 | 1057 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0271040 | sp|P42730|CLPB1_ARATH | 69.780 | 728 | 197 | 7 | 65 | 776 | 150 | 870 | 0.0 | 998 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0271040 | A0A072UQA8 | 73.598 | 731 | 170 | 6 | 65 | 776 | 150 | 876 | 0.0 | 1057 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005350 | Msa0271040 | 0.800014 | 1.757874e-48 | -8.615850e-47 |
| Msa0011720 | Msa0271040 | 0.808680 | 2.749613e-50 | -8.615850e-47 |
| Msa0050760 | Msa0271040 | 0.809480 | 1.853697e-50 | -8.615850e-47 |
| Msa0053900 | Msa0271040 | 0.836274 | 1.029795e-56 | -8.615850e-47 |
| Msa0097990 | Msa0271040 | 0.803344 | 3.646396e-49 | -8.615850e-47 |
| Msa0099730 | Msa0271040 | 0.801466 | 8.885008e-49 | -8.615850e-47 |
| Msa0139720 | Msa0271040 | -0.804205 | 2.415142e-49 | -8.615850e-47 |
| Msa0141100 | Msa0271040 | 0.805556 | 1.260813e-49 | -8.615850e-47 |
| Msa0148340 | Msa0271040 | 0.836759 | 7.752867e-57 | -8.615850e-47 |
| Msa0148360 | Msa0271040 | 0.834821 | 2.400739e-56 | -8.615850e-47 |
| Msa0173090 | Msa0271040 | 0.802303 | 5.980698e-49 | -8.615850e-47 |
| Msa0188680 | Msa0271040 | -0.816080 | 6.648062e-52 | -8.615850e-47 |
| Msa0191040 | Msa0271040 | 0.822570 | 2.207732e-53 | -8.615850e-47 |
| Msa0223380 | Msa0271040 | 0.817329 | 3.488847e-52 | -8.615850e-47 |
| Msa0233340 | Msa0271040 | 0.823202 | 1.572662e-53 | -8.615850e-47 |
| Msa0236440 | Msa0271040 | 0.919223 | 5.888430e-87 | -8.615850e-47 |
| Msa0243690 | Msa0271040 | 0.828504 | 8.668095e-55 | -8.615850e-47 |
| Msa0266450 | Msa0271040 | 0.808957 | 2.399022e-50 | -8.615850e-47 |
| Msa0270220 | Msa0271040 | -0.820877 | 5.436834e-53 | -8.615850e-47 |
| Msa0271040 | Msa0277530 | 0.802848 | 4.616615e-49 | -8.615850e-47 |
| Msa0271040 | Msa0307830 | -0.823685 | 1.212640e-53 | -8.615850e-47 |
| Msa0271040 | Msa0309350 | 0.998504 | 4.878315e-267 | -8.615850e-47 |
| Msa0271040 | Msa0311690 | 0.822265 | 2.598477e-53 | -8.615850e-47 |
| Msa0271040 | Msa0371420 | -0.809114 | 2.219998e-50 | -8.615850e-47 |
| Msa0271040 | Msa0371560 | 0.804339 | 2.265377e-49 | -8.615850e-47 |
| Msa0271040 | Msa0374850 | 0.806564 | 7.737884e-50 | -8.615850e-47 |
| Msa0271040 | Msa0419620 | -0.803074 | 4.146921e-49 | -8.615850e-47 |
| Msa0271040 | Msa0431830 | 0.803165 | 3.971198e-49 | -8.615850e-47 |
| Msa0271040 | Msa0464900 | 0.820859 | 5.489789e-53 | -8.615850e-47 |
| Msa0271040 | Msa0465680 | -0.816277 | 6.008029e-52 | -8.615850e-47 |
| Msa0271040 | Msa0484780 | 0.808099 | 3.656914e-50 | -8.615850e-47 |
| Msa0271040 | Msa0511720 | -0.802693 | 4.969348e-49 | -8.615850e-47 |
| Msa0271040 | Msa0517330 | 0.805504 | 1.292977e-49 | -8.615850e-47 |
| Msa0271040 | Msa0531430 | 0.811885 | 5.597773e-51 | -8.615850e-47 |
| Msa0271040 | Msa0534590 | 0.824574 | 7.498287e-54 | -8.615850e-47 |
| Msa0271040 | Msa0579340 | 0.805995 | 1.019811e-49 | -8.615850e-47 |
| Msa0271040 | Msa0590800 | 0.807011 | 6.226239e-50 | -8.615850e-47 |
| Msa0271040 | Msa0610370 | 0.801070 | 1.071138e-48 | -8.615850e-47 |
| Msa0271040 | Msa0611380 | 0.816185 | 6.298190e-52 | -8.615850e-47 |
| Msa0271040 | Msa0622340 | 0.802921 | 4.460031e-49 | -8.615850e-47 |
| Msa0271040 | Msa0631120 | 0.828647 | 8.001439e-55 | -8.615850e-47 |
| Msa0271040 | Msa0666030 | 0.813033 | 3.140473e-51 | -8.615850e-47 |
| Msa0271040 | Msa0669340 | 0.828089 | 1.091187e-54 | -8.615850e-47 |
| Msa0271040 | Msa0717260 | 0.808079 | 3.694029e-50 | -8.615850e-47 |
| Msa0271040 | Msa0731710 | 0.812348 | 4.436005e-51 | -8.615850e-47 |
| Msa0271040 | Msa0758320 | 0.809969 | 1.454826e-50 | -8.615850e-47 |
| Msa0271040 | Msa0775440 | 0.802157 | 6.409924e-49 | -8.615850e-47 |
| Msa0271040 | Msa0790390 | -0.817568 | 3.081828e-52 | -8.615850e-47 |
| Msa0271040 | Msa0799700 | 0.822383 | 2.440072e-53 | -8.615850e-47 |
| Msa0271040 | Msa0812820 | 0.817159 | 3.809847e-52 | -8.615850e-47 |
| Msa0271040 | Msa0837980 | 0.801419 | 9.086846e-49 | -8.615850e-47 |
| Msa0271040 | Msa0853320 | 0.829217 | 5.823017e-55 | -8.615850e-47 |
| Msa0271040 | Msa0855310 | 0.808161 | 3.547790e-50 | -8.615850e-47 |
| Msa0271040 | Msa0870690 | 0.823942 | 1.055288e-53 | -8.615850e-47 |
| Msa0271040 | Msa0880710 | 0.817445 | 3.285215e-52 | -8.615850e-47 |
| Msa0271040 | Msa0882510 | 0.803608 | 3.214890e-49 | -8.615850e-47 |
| Msa0271040 | Msa0908170 | 0.837585 | 4.764476e-57 | -8.615850e-47 |
| Msa0271040 | Msa0926800 | 0.814355 | 1.607412e-51 | -8.615850e-47 |
| Msa0271040 | Msa0927670 | 0.809457 | 1.874135e-50 | -8.615850e-47 |
| Msa0271040 | Msa0974530 | 0.803058 | 4.178285e-49 | -8.615850e-47 |
| Msa0271040 | Msa0999040 | 0.802908 | 4.487788e-49 | -8.615850e-47 |
| Msa0271040 | Msa1033560 | 0.812647 | 3.816302e-51 | -8.615850e-47 |
| Msa0271040 | Msa1037700 | -0.813898 | 2.027074e-51 | -8.615850e-47 |
| Msa0271040 | Msa1073350 | 0.807996 | 3.846583e-50 | -8.615850e-47 |
| Msa0271040 | Msa1113850 | 0.809742 | 1.628253e-50 | -8.615850e-47 |
| Msa0271040 | Msa1130210 | -0.811031 | 8.581207e-51 | -8.615850e-47 |
| Msa0271040 | Msa1132560 | -0.809948 | 1.470072e-50 | -8.615850e-47 |
| Msa0271040 | Msa1142500 | 0.817198 | 3.734031e-52 | -8.615850e-47 |
| Msa0271040 | Msa1187530 | 0.800448 | 1.434567e-48 | -8.615850e-47 |
| Msa0271040 | Msa1214880 | 0.804322 | 2.283765e-49 | -8.615850e-47 |
| Msa0271040 | Msa1217810 | 0.802263 | 6.095203e-49 | -8.615850e-47 |
| Msa0271040 | Msa1218480 | 0.831817 | 1.345984e-55 | -8.615850e-47 |
| Msa0271040 | Msa1219260 | 0.800352 | 1.500768e-48 | -8.615850e-47 |
| Msa0271040 | Msa1233500 | 0.806867 | 6.676854e-50 | -8.615850e-47 |
| Msa0271040 | Msa1258050 | 0.808069 | 3.711028e-50 | -8.615850e-47 |
| Msa0271040 | Msa1266960 | 0.805582 | 1.245116e-49 | -8.615850e-47 |
| Msa0271040 | Msa1291870 | 0.801605 | 8.321857e-49 | -8.615850e-47 |
| Msa0271040 | Msa1300860 | 0.800164 | 1.638496e-48 | -8.615850e-47 |
| Msa0271040 | Msa1362510 | 0.807210 | 5.648941e-50 | -8.615850e-47 |
| Msa0271040 | Msa1397250 | 0.811647 | 6.305275e-51 | -8.615850e-47 |
| Msa0271040 | Msa1397340 | 0.999871 | 0.000000e+00 | -8.615850e-47 |
| Msa0271040 | Msa1399560 | 0.804048 | 2.603834e-49 | -8.615850e-47 |
| Msa0271040 | Msa1403580 | -0.810233 | 1.276517e-50 | -8.615850e-47 |
| Msa0271040 | Msa1419110 | 0.808062 | 3.724326e-50 | -8.615850e-47 |
| Msa0271040 | Msa1439230 | 0.800571 | 1.354162e-48 | -8.615850e-47 |
| Msa0271040 | Msa1440340 | 0.821939 | 3.092900e-53 | -8.615850e-47 |
| Msa0271040 | Msa1440600 | 0.806991 | 6.286125e-50 | -8.615850e-47 |
| Msa0271040 | Msa1443290 | -0.816744 | 4.723200e-52 | -8.615850e-47 |
| Msa0271040 | Msa1450020 | 0.801555 | 8.519518e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0271040 | MtrunA17_Chr4g0061371 | 73.598 | 731 | 170 | 6 | 65 | 776 | 150 | 876 | 0.0 | 1057 |
| Msa0271040 | MtrunA17_Chr7g0225161 | 73.007 | 715 | 173 | 6 | 81 | 776 | 162 | 875 | 0.0 | 1010 |
| Msa0271040 | MtrunA17_Chr7g0218421 | 48.373 | 707 | 339 | 7 | 73 | 753 | 233 | 939 | 0.0 | 639 |
| Msa0271040 | MtrunA17_Chr6g0454071 | 48.023 | 708 | 342 | 7 | 72 | 753 | 228 | 935 | 0.0 | 637 |
| Msa0271040 | MtrunA17_Chr3g0137071 | 46.713 | 715 | 354 | 7 | 72 | 759 | 240 | 954 | 0.0 | 609 |
| Msa0271040 | MtrunA17_Chr2g0329561 | 63.924 | 474 | 160 | 4 | 307 | 775 | 4 | 471 | 0.0 | 587 |
| Msa0271040 | MtrunA17_Chr2g0329561 | 65.152 | 66 | 14 | 2 | 1 | 57 | 1 | 66 | 2.85e-15 | 79.3 |
| Msa0271040 | MtrunA17_Chr3g0131711 | 40.084 | 711 | 336 | 12 | 82 | 761 | 254 | 905 | 2.04e-158 | 483 |
| Msa0271040 | MtrunA17_Chr3g0134631 | 39.324 | 740 | 355 | 13 | 59 | 761 | 228 | 910 | 3.77e-156 | 478 |
| Msa0271040 | MtrunA17_Chr8g0385811 | 38.679 | 742 | 357 | 14 | 59 | 761 | 227 | 909 | 1.07e-155 | 476 |
| Msa0271040 | MtrunA17_Chr3g0131351 | 37.483 | 715 | 352 | 14 | 82 | 761 | 297 | 951 | 5.13e-139 | 434 |
| Msa0271040 | MtrunA17_Chr2g0277781 | 68.562 | 299 | 83 | 4 | 447 | 740 | 2 | 294 | 3.00e-134 | 399 |
| Msa0271040 | MtrunA17_Chr3g0102771 | 43.168 | 322 | 174 | 4 | 438 | 752 | 453 | 772 | 2.62e-83 | 283 |
| Msa0271040 | MtrunA17_Chr3g0102771 | 41.270 | 252 | 125 | 6 | 73 | 311 | 197 | 438 | 2.80e-42 | 165 |
| Msa0271040 | MtrunA17_Chr2g0277771 | 76.433 | 157 | 32 | 1 | 620 | 776 | 1 | 152 | 2.49e-76 | 244 |
| Msa0271040 | MtrunA17_Chr3g0135231 | 48.560 | 243 | 103 | 7 | 102 | 330 | 261 | 495 | 2.72e-52 | 193 |
| Msa0271040 | MtrunA17_Chr3g0135231 | 40.206 | 97 | 58 | 0 | 577 | 673 | 546 | 642 | 3.81e-13 | 73.2 |
| Msa0271040 | MtrunA17_Chr7g0260941 | 54.140 | 157 | 27 | 2 | 620 | 776 | 1 | 112 | 1.88e-43 | 153 |
| Msa0271040 | MtrunA17_Chr7g0260931 | 66.316 | 95 | 28 | 1 | 434 | 524 | 1 | 95 | 2.36e-33 | 123 |
| Msa0271040 | MtrunA17_Chr1g0188061 | 48.837 | 86 | 44 | 0 | 531 | 616 | 232 | 317 | 1.45e-21 | 97.1 |
| Msa0271040 | MtrunA17_Chr2g0277791 | 61.111 | 72 | 27 | 1 | 368 | 439 | 1 | 71 | 4.85e-18 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0271040 | AT1G74310.1 | 69.780 | 728 | 197 | 7 | 65 | 776 | 150 | 870 | 0.0 | 998 |
| Msa0271040 | AT1G74310.2 | 71.064 | 667 | 173 | 5 | 65 | 715 | 150 | 812 | 0.0 | 931 |
| Msa0271040 | AT5G15450.1 | 47.458 | 708 | 345 | 8 | 72 | 753 | 226 | 932 | 0.0 | 637 |
| Msa0271040 | AT2G25140.1 | 46.556 | 726 | 358 | 8 | 72 | 767 | 231 | 956 | 0.0 | 619 |
| Msa0271040 | AT4G14670.1 | 61.212 | 495 | 174 | 6 | 81 | 558 | 127 | 620 | 0.0 | 557 |
| Msa0271040 | AT5G50920.1 | 40.510 | 706 | 334 | 13 | 82 | 758 | 256 | 904 | 3.62e-157 | 481 |
| Msa0271040 | AT3G48870.2 | 40.395 | 708 | 336 | 16 | 83 | 761 | 247 | 897 | 1.09e-153 | 471 |
| Msa0271040 | AT3G48870.1 | 40.395 | 708 | 336 | 16 | 83 | 761 | 278 | 928 | 5.38e-153 | 471 |
| Msa0271040 | AT3G48870.4 | 40.395 | 708 | 336 | 16 | 83 | 761 | 278 | 928 | 5.38e-153 | 471 |
| Msa0271040 | AT3G48870.3 | 40.395 | 708 | 336 | 16 | 83 | 761 | 278 | 928 | 5.38e-153 | 471 |
| Msa0271040 | AT5G51070.1 | 35.944 | 715 | 368 | 12 | 71 | 751 | 259 | 917 | 2.32e-131 | 414 |
| Msa0271040 | AT4G14675.1 | 39.189 | 148 | 58 | 1 | 620 | 767 | 1 | 116 | 4.03e-31 | 119 |
| Msa0271040 | AT3G45450.1 | 39.459 | 185 | 84 | 5 | 95 | 267 | 151 | 319 | 1.44e-24 | 106 |
Find 174 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACCTTTCTTTATCATTT+TGG | 0.120981 | 2_3:+2347998 | None:intergenic |
| CGCAAAGCTTTGGAAATTTA+TGG | 0.135274 | 2_3:-2349569 | Msa0271040:CDS |
| CTGCTTGAAGTCTTAAATTA+TGG | 0.168550 | 2_3:-2347348 | Msa0271040:CDS |
| TTAAAACATCGTCAGCTTTC+TGG | 0.178386 | 2_3:+2346620 | None:intergenic |
| TATTCAAACATGTTATCTTT+AGG | 0.205522 | 2_3:+2346577 | None:intergenic |
| GAGAGTGAAACTTCTTTCTT+TGG | 0.210286 | 2_3:-2349891 | Msa0271040:CDS |
| GGCTAACAACCTCAGCTATT+TGG | 0.215789 | 2_3:+2348052 | None:intergenic |
| CATCTCATAAGTGGACTTTC+AGG | 0.227432 | 2_3:-2347246 | Msa0271040:CDS |
| ATTCAAACATGTTATCTTTA+GGG | 0.236416 | 2_3:+2346578 | None:intergenic |
| GGTAAAACAGCTGTTGTTAA+AGG | 0.241250 | 2_3:-2349422 | Msa0271040:CDS |
| CATGTTATCTTTAGGGTGTT+TGG | 0.241398 | 2_3:+2346585 | None:intergenic |
| AGAAGTGCAACTTTATTCTT+TGG | 0.244608 | 2_3:-2348696 | Msa0271040:CDS |
| AGTAACAATATTGTTCTTAT+AGG | 0.275043 | 2_3:-2349458 | Msa0271040:CDS |
| TTCACTCTCTTCCTTTCCTT+TGG | 0.285941 | 2_3:+2349905 | None:intergenic |
| GAGTGGATAGGAATACTTAT+AGG | 0.307426 | 2_3:-2349308 | Msa0271040:CDS |
| GTGAGATCTATAGCTGGTTT+TGG | 0.315276 | 2_3:-2347913 | Msa0271040:CDS |
| GATACGAGAGCATTAGTTTC+CGG | 0.328531 | 2_3:-2349335 | Msa0271040:CDS |
| ACGTGATGAAGAAATAATTA+AGG | 0.328816 | 2_3:-2349501 | Msa0271040:CDS |
| TTCCTATTCCTTGGACCAAC+TGG | 0.338075 | 2_3:-2347865 | Msa0271040:CDS |
| AGCTGGCTAGGATGCTTATA+AGG | 0.347885 | 2_3:-2346786 | Msa0271040:CDS |
| ATTGGTTCCTTCCTATTCCT+TGG | 0.353308 | 2_3:-2347874 | Msa0271040:CDS |
| AGAGTGAAACTTCTTTCTTT+GGG | 0.355201 | 2_3:-2349890 | Msa0271040:CDS |
| GGAAATTTATGGTCGAGATT+TGG | 0.362675 | 2_3:-2349558 | Msa0271040:CDS |
| TGCTTGAAGTCTTAAATTAT+GGG | 0.364404 | 2_3:-2347347 | Msa0271040:CDS |
| AGGAAGTGAGAAAGCATTTC+AGG | 0.372211 | 2_3:-2347185 | Msa0271040:CDS |
| TGAAGTTAAGTTAATTGCTT+TGG | 0.375671 | 2_3:-2349357 | Msa0271040:CDS |
| TTTGTTGTATTGTAGGAGTA+TGG | 0.377687 | 2_3:-2346853 | Msa0271040:intron |
| AATTGAATTGTTAGGTATGT+TGG | 0.377879 | 2_3:-2347474 | Msa0271040:intron |
| AATGATAAAGAAAGGTTGAT+TGG | 0.380463 | 2_3:-2347994 | Msa0271040:CDS |
| CTATGTACATGTCGGACTAC+TGG | 0.383161 | 2_3:-2347774 | Msa0271040:CDS |
| TTGTCTAGTCAGTACATATC+TGG | 0.387411 | 2_3:-2348957 | Msa0271040:intron |
| AAACAACACCTGATGAATAT+AGG | 0.391432 | 2_3:-2349145 | Msa0271040:CDS |
| AACTTTATTCTTTGGAGAAA+AGG | 0.394568 | 2_3:-2348688 | Msa0271040:CDS |
| GTAAAACAGCTGTTGTTAAA+GGG | 0.407230 | 2_3:-2349421 | Msa0271040:CDS |
| AGTGGATAGGAATACTTATA+GGG | 0.409625 | 2_3:-2349307 | Msa0271040:CDS |
| TTAGCCGATGGACTGGTATA+CGG | 0.410456 | 2_3:-2348035 | Msa0271040:CDS |
| ACATATTTCCTATATTCATC+AGG | 0.416945 | 2_3:+2349137 | None:intergenic |
| ACAACCTCAGCTATTTGGTT+TGG | 0.418309 | 2_3:+2348057 | None:intergenic |
| CGAGATTTGGTTGAAGAGGC+AGG | 0.431684 | 2_3:-2349545 | Msa0271040:CDS |
| AGGAAATTGCTATCCTCAAC+AGG | 0.434988 | 2_3:-2348733 | Msa0271040:CDS |
| CACCAGTTGGTCCAAGGAAT+AGG | 0.436137 | 2_3:+2347863 | None:intergenic |
| TCTTCATCACGTCCGACAAC+AGG | 0.439800 | 2_3:+2349512 | None:intergenic |
| GAAGCAGGAACGCAAAGCTT+TGG | 0.443169 | 2_3:-2349579 | Msa0271040:CDS |
| TCACTACAGCATTTATTGCT+TGG | 0.445015 | 2_3:+2347932 | None:intergenic |
| ACTAAATCAATTGCCTTGTC+AGG | 0.445782 | 2_3:+2348803 | None:intergenic |
| ACTTTATTCTTTGGAGAAAA+GGG | 0.451139 | 2_3:-2348687 | Msa0271040:CDS |
| AAAGGGTTGGCTCAGATGAT+AGG | 0.452018 | 2_3:-2349404 | Msa0271040:CDS |
| ACTTGAAAGGAGGTTTCAAC+AGG | 0.453211 | 2_3:-2349099 | Msa0271040:CDS |
| TGCTGAGAAAGGCATCGCTT+TGG | 0.455960 | 2_3:-2347055 | Msa0271040:CDS |
| GCCACAATTGTTGACTCTGC+TGG | 0.457766 | 2_3:-2347163 | Msa0271040:CDS |
| AGCTTCTAAATGTGTGCAAA+AGG | 0.459813 | 2_3:-2349658 | Msa0271040:CDS |
| CATACTTACATTTGCAAGAC+GGG | 0.460559 | 2_3:+2349841 | None:intergenic |
| TGAAGAGCTTGTCTTATCTC+TGG | 0.460699 | 2_3:-2348217 | Msa0271040:CDS |
| CTCTTTCTCGCGAGCCATTG+AGG | 0.464567 | 2_3:-2347119 | Msa0271040:CDS |
| AGATTGATTGGTGCTGCACC+AGG | 0.464646 | 2_3:-2347733 | Msa0271040:CDS |
| AGAGATTCAGACCTACGATA+TGG | 0.469603 | 2_3:-2348165 | Msa0271040:CDS |
| GGAAGACCTCGATATCCAAT+TGG | 0.469840 | 2_3:-2347892 | Msa0271040:CDS |
| GTTTGCAAGGTTGCATATGA+AGG | 0.471807 | 2_3:-2347094 | Msa0271040:CDS |
| TTGTTAAAGTTGTGTGTGAC+AGG | 0.473261 | 2_3:-2346518 | Msa0271040:three_prime_UTR |
| GTTGCATTCTCTTCCTGTTG+AGG | 0.477862 | 2_3:+2348720 | None:intergenic |
| GAGATTGTTAATGCTGAAAC+GGG | 0.478591 | 2_3:-2346679 | Msa0271040:CDS |
| TTGAGGATAGCAATTTCCTC+TGG | 0.479416 | 2_3:+2348737 | None:intergenic |
| CTCAATGGCTCGCGAGAAAG+AGG | 0.479438 | 2_3:+2347120 | None:intergenic |
| AGGAATAGGAAGGAACCAAT+TGG | 0.479821 | 2_3:+2347877 | None:intergenic |
| CACTCTGTGTCAAGATTGAT+TGG | 0.480315 | 2_3:-2347745 | Msa0271040:CDS |
| AGAGATTGTTAATGCTGAAA+CGG | 0.482511 | 2_3:-2346680 | Msa0271040:CDS |
| ATATAGGAAATATGTGGAAA+AGG | 0.487573 | 2_3:-2349129 | Msa0271040:CDS |
| TGAGAAAGGCATCGCTTTGG+CGG | 0.490554 | 2_3:-2347052 | Msa0271040:CDS |
| CAGCTTGAATGTAGCACTGA+TGG | 0.492920 | 2_3:-2348111 | Msa0271040:CDS |
| AAGAAGTGGAAGATGCTAAA+GGG | 0.493762 | 2_3:-2349265 | Msa0271040:CDS |
| GGCAATTGATTTAGTTGATG+AGG | 0.493813 | 2_3:-2348795 | Msa0271040:CDS |
| GGTATACGGGTGACCTGGCT+TGG | 0.494771 | 2_3:-2348021 | Msa0271040:CDS |
| TACGTTGATGCTGGTCAGAA+TGG | 0.496544 | 2_3:-2346736 | Msa0271040:CDS |
| GACGATTAACTGAAGCTGTA+AGG | 0.498021 | 2_3:-2347437 | Msa0271040:CDS |
| ATTATCATGACCTCAAACCT+TGG | 0.498059 | 2_3:-2347276 | Msa0271040:CDS |
| TGCTCGCGATAAAGTAATGC+AGG | 0.506751 | 2_3:-2347205 | Msa0271040:CDS |
| AACAGCTGTTGTTAAAGGGT+TGG | 0.511916 | 2_3:-2349417 | Msa0271040:CDS |
| AGCTTGAATGTAGCACTGAT+GGG | 0.513937 | 2_3:-2348110 | Msa0271040:CDS |
| TTATGAGATGCTCGGATCCA+AGG | 0.515420 | 2_3:+2347259 | None:intergenic |
| GGTTGATTGGACTTGGTGAC+AGG | 0.517013 | 2_3:-2347981 | Msa0271040:CDS |
| CTTATAGGTGAGACGGGTGT+TGG | 0.518084 | 2_3:-2349443 | Msa0271040:CDS |
| ATTGTTCTTATAGGTGAGAC+GGG | 0.519936 | 2_3:-2349449 | Msa0271040:CDS |
| ATTTCACCTCGATCAAACAT+AGG | 0.520140 | 2_3:+2349182 | None:intergenic |
| AAAGAAGTGGAAGATGCTAA+AGG | 0.521154 | 2_3:-2349266 | Msa0271040:CDS |
| ACGATATGGTGCAATTGATA+AGG | 0.521944 | 2_3:-2348151 | Msa0271040:CDS |
| AGTTTAGTAAAGAGAAAGAG+AGG | 0.523045 | 2_3:-2348272 | Msa0271040:CDS |
| AAAGAAAGGTTGATTGGACT+TGG | 0.524278 | 2_3:-2347988 | Msa0271040:CDS |
| GAGGTTGTTAGCCGATGGAC+TGG | 0.524764 | 2_3:-2348042 | Msa0271040:CDS |
| AACCTTGCAAACTTCCTCAA+TGG | 0.527609 | 2_3:+2347105 | None:intergenic |
| TATGTACATGTCGGACTACT+GGG | 0.531978 | 2_3:-2347773 | Msa0271040:CDS |
| TAGCCGATGGACTGGTATAC+GGG | 0.532823 | 2_3:-2348034 | Msa0271040:CDS |
| ACAACGGTTTACGTTGATGC+TGG | 0.534660 | 2_3:-2346745 | Msa0271040:CDS |
| CGGAAAGAACTTGACAACTT+AGG | 0.542188 | 2_3:-2348321 | Msa0271040:CDS |
| GATACTATTAGTATACTTCG+TGG | 0.545801 | 2_3:-2349050 | Msa0271040:CDS |
| GTTGGCTCAGATGATAGGTA+AGG | 0.546382 | 2_3:-2349399 | Msa0271040:CDS |
| GGATCCGAGCATCTCATAAG+TGG | 0.547581 | 2_3:-2347255 | Msa0271040:CDS |
| ATGCTGAAACGGGGTGAAGT+CGG | 0.548592 | 2_3:-2346669 | Msa0271040:exon |
| TGATGAATATAGGAAATATG+TGG | 0.549577 | 2_3:-2349135 | Msa0271040:CDS |
| TGACAACTTAGGAGACAAGC+TGG | 0.549649 | 2_3:-2348310 | Msa0271040:CDS |
| TTGGCCAAAATGATAAAGAA+AGG | 0.551097 | 2_3:-2348002 | Msa0271040:CDS |
| TATTGTTCTTATAGGTGAGA+CGG | 0.551849 | 2_3:-2349450 | Msa0271040:CDS |
| AATTGAACTCTAACACCAGC+AGG | 0.554311 | 2_3:+2349938 | None:intergenic |
| GAGTGAAACTTCTTTCTTTG+GGG | 0.554927 | 2_3:-2349889 | Msa0271040:CDS |
| GGGAAACTTGATCCTGTTGT+CGG | 0.555369 | 2_3:-2349524 | Msa0271040:CDS |
| TTCCTTGGACCAACTGGTGT+CGG | 0.556177 | 2_3:-2347859 | Msa0271040:CDS |
| AGCCATTGAGGAAGTTTGCA+AGG | 0.558014 | 2_3:-2347107 | Msa0271040:CDS |
| CGAGGTGAAATTAGATGCAT+CGG | 0.558598 | 2_3:-2349170 | Msa0271040:CDS |
| GTTTCCGGTGCTGAGTGGAT+AGG | 0.559043 | 2_3:-2349320 | Msa0271040:CDS |
| TACCGACACCAGTTGGTCCA+AGG | 0.560599 | 2_3:+2347857 | None:intergenic |
| GGACTGGTATACGGGTGACC+TGG | 0.563223 | 2_3:-2348026 | Msa0271040:CDS |
| AGTGGAAGATGCTAAAGGGA+AGG | 0.564506 | 2_3:-2349261 | Msa0271040:CDS |
| TAGCTGAGGTTGTTAGCCGA+TGG | 0.570098 | 2_3:-2348047 | Msa0271040:CDS |
| GCTTGTCTTATCTCTGGAGG+AGG | 0.572681 | 2_3:-2348211 | Msa0271040:CDS |
| AGGTTGCACAATATAGTTGT+GGG | 0.576981 | 2_3:-2347961 | Msa0271040:CDS |
| TGGTCGAGATTTGGTTGAAG+AGG | 0.577488 | 2_3:-2349549 | Msa0271040:CDS |
| AAGTCCACTTATGAGATGCT+CGG | 0.578688 | 2_3:+2347251 | None:intergenic |
| AGTTGATGAGGCTTGTGCAA+GGG | 0.584296 | 2_3:-2348783 | Msa0271040:CDS |
| TCAATTTGATAGTCAGCCAA+AGG | 0.587091 | 2_3:-2349921 | Msa0271040:CDS |
| TATTCCTATCCACTCAGCAC+CGG | 0.587977 | 2_3:+2349316 | None:intergenic |
| GCTGTAGTGAGATCTATAGC+TGG | 0.588552 | 2_3:-2347919 | Msa0271040:CDS |
| GAGATTTGGTTGAAGAGGCA+GGG | 0.590390 | 2_3:-2349544 | Msa0271040:CDS |
| AGGTAGTGTCAAAGCTGGCT+AGG | 0.590683 | 2_3:-2346798 | Msa0271040:CDS |
| TCCAGCAGAGTCAACAATTG+TGG | 0.593158 | 2_3:+2347162 | None:intergenic |
| GATGCTGGTCAGAATGGAAG+TGG | 0.593159 | 2_3:-2346730 | Msa0271040:CDS |
| TTTATCGCGAGCAACTTCCA+TGG | 0.593540 | 2_3:+2347215 | None:intergenic |
| AGAGGATTGATGAGATTCGA+AGG | 0.595177 | 2_3:-2348254 | Msa0271040:CDS |
| GAACAAGGTAGTGTCAAAGC+TGG | 0.596334 | 2_3:-2346803 | Msa0271040:CDS |
| ATTTGATGATGAAAATCAGT+TGG | 0.596906 | 2_3:-2347800 | Msa0271040:CDS |
| ATATGGTGCAATTGATAAGG+TGG | 0.598747 | 2_3:-2348148 | Msa0271040:CDS |
| CCATACTTACATTTGCAAGA+CGG | 0.598863 | 2_3:+2349840 | None:intergenic |
| TGGTCAGAATGGAAGTGGTT+TGG | 0.600627 | 2_3:-2346725 | Msa0271040:CDS |
| TTGATAGTCAGCCAAAGGAA+AGG | 0.601324 | 2_3:-2349916 | Msa0271040:CDS |
| TTGAAACCTATGTTTGATCG+AGG | 0.604726 | 2_3:-2349188 | Msa0271040:CDS |
| TAGTTGATGAGGCTTGTGCA+AGG | 0.606110 | 2_3:-2348784 | Msa0271040:CDS |
| AGGATACAGCACTTGAAAGG+AGG | 0.606188 | 2_3:-2349109 | Msa0271040:CDS |
| GAGAAATATGAGGTTCGTCA+TGG | 0.606189 | 2_3:-2349020 | Msa0271040:CDS |
| TGTTAGGTATGTTGGACATG+AGG | 0.606750 | 2_3:-2347466 | Msa0271040:intron |
| TAACTGAAGCTGTAAGGAGA+AGG | 0.608653 | 2_3:-2347431 | Msa0271040:CDS |
| AACTTAACTTCAGCAAGACA+AGG | 0.610443 | 2_3:+2349368 | None:intergenic |
| TTAAAGTTGTGTGTGACAGG+TGG | 0.614168 | 2_3:-2346515 | Msa0271040:three_prime_UTR |
| AAAAGGATACAGCACTTGAA+AGG | 0.614212 | 2_3:-2349112 | Msa0271040:CDS |
| CATTAGTTTCCGGTGCTGAG+TGG | 0.616510 | 2_3:-2349325 | Msa0271040:CDS |
| ATGCTCGGATCCAAGGTTTG+AGG | 0.618309 | 2_3:+2347266 | None:intergenic |
| CGGCTGCAACAACAATTGAA+CGG | 0.618525 | 2_3:+2348982 | None:intergenic |
| TTGGCTCAGATGATAGGTAA+GGG | 0.619613 | 2_3:-2349398 | Msa0271040:CDS |
| GGATAGGAATACTTATAGGG+AGG | 0.621133 | 2_3:-2349304 | Msa0271040:CDS |
| CTAATAGTATCAGACACACT+AGG | 0.627045 | 2_3:+2349062 | None:intergenic |
| CTCTGGAGGAGGCTGACAGT+CGG | 0.627164 | 2_3:-2348200 | Msa0271040:CDS |
| TGGACTACAAGAGAAATATG+AGG | 0.627910 | 2_3:-2349030 | Msa0271040:CDS |
| TTGAAGTCTTAAATTATGGG+AGG | 0.628820 | 2_3:-2347344 | Msa0271040:CDS |
| CAGGTTGCACAATATAGTTG+TGG | 0.632246 | 2_3:-2347962 | Msa0271040:CDS |
| CGGTAAAACAAAACTTGCTG+AGG | 0.633195 | 2_3:-2347839 | Msa0271040:CDS |
| TATCAATTGCACCATATCGT+AGG | 0.635478 | 2_3:+2348154 | None:intergenic |
| AGGTAAAAGATGAATCCTGC+TGG | 0.635506 | 2_3:-2349953 | Msa0271040:exon |
| AATTATGGGAGGCTAACTGA+TGG | 0.637108 | 2_3:-2347333 | Msa0271040:CDS |
| GCTTGAATGTAGCACTGATG+GGG | 0.639385 | 2_3:-2348109 | Msa0271040:CDS |
| AAGGAACCAATTGGATATCG+AGG | 0.641742 | 2_3:+2347886 | None:intergenic |
| TCAACTTCATAGTCAGCCAG+AGG | 0.642623 | 2_3:-2348753 | Msa0271040:CDS |
| AGAGCTTGTCTTATCTCTGG+AGG | 0.644174 | 2_3:-2348214 | Msa0271040:CDS |
| AGTTGGTCCAAGGAATAGGA+AGG | 0.649213 | 2_3:+2347867 | None:intergenic |
| AGGGCGTCATCTTCCTGACA+AGG | 0.655997 | 2_3:-2348816 | Msa0271040:CDS |
| TTGATGTTGACAGACTCTGT+CGG | 0.656139 | 2_3:-2348081 | Msa0271040:CDS |
| GGGAGGCTAACTGATGGACA+AGG | 0.656241 | 2_3:-2347327 | Msa0271040:CDS |
| AGAAATTGATGAGAATACAA+CGG | 0.667738 | 2_3:-2346761 | Msa0271040:CDS |
| GTTGGTGACTATGTACATGT+CGG | 0.670077 | 2_3:-2347782 | Msa0271040:CDS |
| TATGTACTGACTAGACAACT+CGG | 0.687782 | 2_3:+2348962 | None:intergenic |
| GATTGATTGGTGCTGCACCA+GGG | 0.689462 | 2_3:-2347732 | Msa0271040:intron |
| AGGTATGTTGGACATGAGGA+CGG | 0.689751 | 2_3:-2347462 | Msa0271040:CDS |
| CGGACCAAACCAAATAGCTG+AGG | 0.694161 | 2_3:-2348061 | Msa0271040:CDS |
| TGATGGACAAGGCAGAACTG+TGG | 0.696859 | 2_3:-2347316 | Msa0271040:CDS |
| TCACCCGTATACCAGTCCAT+CGG | 0.708490 | 2_3:+2348031 | None:intergenic |
| ACTTTCAGGAAAATGTACCA+TGG | 0.708787 | 2_3:-2347232 | Msa0271040:CDS |
| TATGTTGGACATGAGGACGG+TGG | 0.731698 | 2_3:-2347459 | Msa0271040:CDS |
| AGATTGTTAATGCTGAAACG+GGG | 0.756258 | 2_3:-2346678 | Msa0271040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACCTAAATATTAATT+CGG | + | chr2_3:2346757-2346776 | None:intergenic | 10.0% |
| !! | AATAAGATATTATAAACTTA+AGG | + | chr2_3:2348360-2348379 | None:intergenic | 10.0% |
| !!! | TTATAGTTGATATTATTTAT+AGG | - | chr2_3:2348484-2348503 | Msa0271040:intron | 10.0% |
| !!! | CACTCTTTTTTTTTTTTTTA+AGG | - | chr2_3:2346529-2346548 | Msa0271040:three_prime_UTR | 15.0% |
| !!! | TTTTTTTTTTGTAATGTTGT+AGG | - | chr2_3:2346857-2346876 | Msa0271040:intron | 15.0% |
| !!! | GTTTTTGTTTTAACAATTTT+AGG | - | chr2_3:2347020-2347039 | Msa0271040:CDS | 15.0% |
| !!! | TCTTTTATATTAACTATTTG+TGG | - | chr2_3:2347934-2347953 | Msa0271040:CDS | 15.0% |
| !!! | TTTATTTATTTTGAGTTAGT+TGG | - | chr2_3:2348454-2348473 | Msa0271040:intron | 15.0% |
| !! | TAAAAGCTTAAATTAATACT+TGG | - | chr2_3:2349156-2349175 | Msa0271040:CDS | 15.0% |
| !!! | TTATATTTTTGTTGTATTGT+AGG | - | chr2_3:2349970-2349989 | Msa0271040:intron | 15.0% |
| !!! | TCTTTTGAAATCAAAATCAA+AGG | - | chr2_3:2346499-2346518 | Msa0271040:three_prime_UTR | 20.0% |
| !! | TTCCTTAAAAAAATCTGAAT+AGG | - | chr2_3:2346669-2346688 | Msa0271040:exon | 20.0% |
| !! | TCCTTAAAAAAATCTGAATA+GGG | - | chr2_3:2346670-2346689 | Msa0271040:exon | 20.0% |
| !!! | ACTTAACTATCTTTGTTTTA+AGG | + | chr2_3:2346724-2346743 | None:intergenic | 20.0% |
| !! | TAAAACAAAGATAGTTAAGT+AGG | - | chr2_3:2346724-2346743 | Msa0271040:CDS | 20.0% |
| !! | AAAACAAAGATAGTTAAGTA+GGG | - | chr2_3:2346725-2346744 | Msa0271040:CDS | 20.0% |
| !!! | TTTTCACCGAATTAATATTT+AGG | - | chr2_3:2346748-2346767 | Msa0271040:CDS | 20.0% |
| !! | AACTGTTGATATTTATTTGT+AGG | - | chr2_3:2347119-2347138 | Msa0271040:CDS | 20.0% |
| !! | AGTAACAATATTGTTCTTAT+AGG | - | chr2_3:2347372-2347391 | Msa0271040:CDS | 20.0% |
| !!! | TTGTAACTTTTATTTCACAT+GGG | + | chr2_3:2349205-2349224 | None:intergenic | 20.0% |
| !!! | TTTGTAACTTTTATTTCACA+TGG | + | chr2_3:2349206-2349225 | None:intergenic | 20.0% |
| !! | TATATATAAGATACACTTAC+AGG | + | chr2_3:2349848-2349867 | None:intergenic | 20.0% |
| !! | TTTCTTATAGAATAATGCTT+TGG | - | chr2_3:2349881-2349900 | Msa0271040:CDS | 20.0% |
| !! | ATTCAAACATGTTATCTTTA+GGG | + | chr2_3:2350255-2350274 | None:intergenic | 20.0% |
| !! | TATTCAAACATGTTATCTTT+AGG | + | chr2_3:2350256-2350275 | None:intergenic | 20.0% |
| !!! | ACCCTATTCAGATTTTTTTA+AGG | + | chr2_3:2346674-2346693 | None:intergenic | 25.0% |
| !!! | TTCCATGTTTTTAGTAAAGT+AGG | - | chr2_3:2346694-2346713 | Msa0271040:CDS | 25.0% |
| !!! | TCCATGTTTTTAGTAAAGTA+GGG | - | chr2_3:2346695-2346714 | Msa0271040:CDS | 25.0% |
| ! | CTAATCTATACTATGAAGAA+AGG | + | chr2_3:2347056-2347075 | None:intergenic | 25.0% |
| ! | TTGATATTTATTTGTAGGTG+CGG | - | chr2_3:2347124-2347143 | Msa0271040:CDS | 25.0% |
| ! | ACGTGATGAAGAAATAATTA+AGG | - | chr2_3:2347329-2347348 | Msa0271040:CDS | 25.0% |
| ! | TGAAGTTAAGTTAATTGCTT+TGG | - | chr2_3:2347473-2347492 | Msa0271040:intron | 25.0% |
| ! | ACATATTTCCTATATTCATC+AGG | + | chr2_3:2347696-2347715 | None:intergenic | 25.0% |
| ! | TGATGAATATAGGAAATATG+TGG | - | chr2_3:2347695-2347714 | Msa0271040:intron | 25.0% |
| ! | ATATAGGAAATATGTGGAAA+AGG | - | chr2_3:2347701-2347720 | Msa0271040:intron | 25.0% |
| ! | TTAACTATTTGTGGATGTAT+TGG | - | chr2_3:2347943-2347962 | Msa0271040:CDS | 25.0% |
| !!! | TTTGTGTTTTTTGTTTGTCA+AGG | - | chr2_3:2347994-2348013 | Msa0271040:CDS | 25.0% |
| !!! | TTGTGTTTTTTGTTTGTCAA+GGG | - | chr2_3:2347995-2348014 | Msa0271040:CDS | 25.0% |
| !! | AACTTTATTCTTTGGAGAAA+AGG | - | chr2_3:2348142-2348161 | Msa0271040:CDS | 25.0% |
| !! | ACTTTATTCTTTGGAGAAAA+GGG | - | chr2_3:2348143-2348162 | Msa0271040:CDS | 25.0% |
| ! | GATGACAAATTTGAATTAAG+AGG | + | chr2_3:2348238-2348257 | None:intergenic | 25.0% |
| !!! | TTTATTTTGAGTTAGTTGGA+AGG | - | chr2_3:2348458-2348477 | Msa0271040:intron | 25.0% |
| ! | GTTGATATTATTTATAGGTG+CGG | - | chr2_3:2348489-2348508 | Msa0271040:intron | 25.0% |
| !! | TCAACCTTTCTTTATCATTT+TGG | + | chr2_3:2348835-2348854 | None:intergenic | 25.0% |
| !! | AATGATAAAGAAAGGTTGAT+TGG | - | chr2_3:2348836-2348855 | Msa0271040:intron | 25.0% |
| !!! | ATTTGATGATGAAAATCAGT+TGG | - | chr2_3:2349030-2349049 | Msa0271040:CDS | 25.0% |
| ! | TCATTGTGAATTGAATTGTT+AGG | - | chr2_3:2349348-2349367 | Msa0271040:CDS | 25.0% |
| ! | AATTGAATTGTTAGGTATGT+TGG | - | chr2_3:2349356-2349375 | Msa0271040:CDS | 25.0% |
| ! | TGCTTGAAGTCTTAAATTAT+GGG | - | chr2_3:2349483-2349502 | Msa0271040:CDS | 25.0% |
| ! | AGAAATTGATGAGAATACAA+CGG | - | chr2_3:2350069-2350088 | Msa0271040:intron | 25.0% |
| !! | TCTCTTCATTATTTTCTACA+CGG | + | chr2_3:2350135-2350154 | None:intergenic | 25.0% |
| !!! | ATTTTGATGCAGATAACAAA+TGG | - | chr2_3:2350186-2350205 | Msa0271040:intron | 25.0% |
| !! | CATAAAACTGAGTATTGACA+CGG | - | chr2_3:2346627-2346646 | Msa0271040:three_prime_UTR | 30.0% |
| !! | ATAAAACTGAGTATTGACAC+GGG | - | chr2_3:2346628-2346647 | Msa0271040:three_prime_UTR | 30.0% |
| ACCCTACTTTACTAAAAACA+TGG | + | chr2_3:2346699-2346718 | None:intergenic | 30.0% | |
| ATATGATTATCTCGTCATGT+TGG | - | chr2_3:2346815-2346834 | Msa0271040:CDS | 30.0% | |
| AGAGTGAAACTTCTTTCTTT+GGG | - | chr2_3:2346940-2346959 | Msa0271040:intron | 30.0% | |
| !! | GTGTATATGTGTTATTTCGA+TGG | - | chr2_3:2347092-2347111 | Msa0271040:CDS | 30.0% |
| TACAAAAAGATGTGTGCAAA+AGG | - | chr2_3:2347213-2347232 | Msa0271040:CDS | 30.0% | |
| TATTGTTCTTATAGGTGAGA+CGG | - | chr2_3:2347380-2347399 | Msa0271040:CDS | 30.0% | |
| GTAAAACAGCTGTTGTTAAA+GGG | - | chr2_3:2347409-2347428 | Msa0271040:CDS | 30.0% | |
| AGTGGATAGGAATACTTATA+GGG | - | chr2_3:2347523-2347542 | Msa0271040:intron | 30.0% | |
| AAACAACACCTGATGAATAT+AGG | - | chr2_3:2347685-2347704 | Msa0271040:intron | 30.0% | |
| GATACTATTAGTATACTTCG+TGG | - | chr2_3:2347780-2347799 | Msa0271040:CDS | 30.0% | |
| ! | AGAAGTGCAACTTTATTCTT+TGG | - | chr2_3:2348134-2348153 | Msa0271040:CDS | 30.0% |
| AATTTGAATTAAGAGGTCGT+TGG | + | chr2_3:2348231-2348250 | None:intergenic | 30.0% | |
| AGTTTAGTAAAGAGAAAGAG+AGG | - | chr2_3:2348558-2348577 | Msa0271040:intron | 30.0% | |
| TTGGCCAAAATGATAAAGAA+AGG | - | chr2_3:2348828-2348847 | Msa0271040:intron | 30.0% | |
| AGATTAAACACACAAGTGTT+TGG | - | chr2_3:2349179-2349198 | Msa0271040:CDS | 30.0% | |
| ! | AAATGTCGACGTTTGAATTT+TGG | - | chr2_3:2349245-2349264 | Msa0271040:CDS | 30.0% |
| ACTATAGTCTACACTAGAAT+TGG | + | chr2_3:2349298-2349317 | None:intergenic | 30.0% | |
| CTGCTTGAAGTCTTAAATTA+TGG | - | chr2_3:2349482-2349501 | Msa0271040:CDS | 30.0% | |
| TTGAAGTCTTAAATTATGGG+AGG | - | chr2_3:2349486-2349505 | Msa0271040:CDS | 30.0% | |
| ! | TTTGTTGTATTGTAGGAGTA+TGG | - | chr2_3:2349977-2349996 | Msa0271040:intron | 30.0% |
| !!! | TTCTCAATCCACTTTTTAGT+TGG | + | chr2_3:2350010-2350029 | None:intergenic | 30.0% |
| !! | TAAAAAGTGGATTGAGAACA+AGG | - | chr2_3:2350012-2350031 | Msa0271040:intron | 30.0% |
| AGAGATTGTTAATGCTGAAA+CGG | - | chr2_3:2350150-2350169 | Msa0271040:intron | 30.0% | |
| ! | TCAATTTGATAGTCAGCCAA+AGG | - | chr2_3:2346909-2346928 | Msa0271040:intron | 35.0% |
| GAGAGTGAAACTTCTTTCTT+TGG | - | chr2_3:2346939-2346958 | Msa0271040:intron | 35.0% | |
| GAGTGAAACTTCTTTCTTTG+GGG | - | chr2_3:2346941-2346960 | Msa0271040:intron | 35.0% | |
| CATACTTACATTTGCAAGAC+GGG | + | chr2_3:2346992-2347011 | None:intergenic | 35.0% | |
| CCATACTTACATTTGCAAGA+CGG | + | chr2_3:2346993-2347012 | None:intergenic | 35.0% | |
| AGCTTCTAAATGTGTGCAAA+AGG | - | chr2_3:2347172-2347191 | Msa0271040:CDS | 35.0% | |
| !! | CGCAAAGCTTTGGAAATTTA+TGG | - | chr2_3:2347261-2347280 | Msa0271040:CDS | 35.0% |
| GGAAATTTATGGTCGAGATT+TGG | - | chr2_3:2347272-2347291 | Msa0271040:CDS | 35.0% | |
| ATTGTTCTTATAGGTGAGAC+GGG | - | chr2_3:2347381-2347400 | Msa0271040:CDS | 35.0% | |
| GGTAAAACAGCTGTTGTTAA+AGG | - | chr2_3:2347408-2347427 | Msa0271040:CDS | 35.0% | |
| AACTTAACTTCAGCAAGACA+AGG | + | chr2_3:2347465-2347484 | None:intergenic | 35.0% | |
| GAGTGGATAGGAATACTTAT+AGG | - | chr2_3:2347522-2347541 | Msa0271040:intron | 35.0% | |
| AAAGAAGTGGAAGATGCTAA+AGG | - | chr2_3:2347564-2347583 | Msa0271040:intron | 35.0% | |
| AAGAAGTGGAAGATGCTAAA+GGG | - | chr2_3:2347565-2347584 | Msa0271040:intron | 35.0% | |
| TTGAAACCTATGTTTGATCG+AGG | - | chr2_3:2347642-2347661 | Msa0271040:intron | 35.0% | |
| ATTTCACCTCGATCAAACAT+AGG | + | chr2_3:2347651-2347670 | None:intergenic | 35.0% | |
| AAAAGGATACAGCACTTGAA+AGG | - | chr2_3:2347718-2347737 | Msa0271040:intron | 35.0% | |
| CTAATAGTATCAGACACACT+AGG | + | chr2_3:2347771-2347790 | None:intergenic | 35.0% | |
| TGGACTACAAGAGAAATATG+AGG | - | chr2_3:2347800-2347819 | Msa0271040:CDS | 35.0% | |
| !! | TATGTACTGACTAGACAACT+CGG | + | chr2_3:2347871-2347890 | None:intergenic | 35.0% |
| TTGTCTAGTCAGTACATATC+TGG | - | chr2_3:2347873-2347892 | Msa0271040:CDS | 35.0% | |
| ATTTGTGGATGTATTGGATG+TGG | - | chr2_3:2347949-2347968 | Msa0271040:CDS | 35.0% | |
| ACTAAATCAATTGCCTTGTC+AGG | + | chr2_3:2348030-2348049 | None:intergenic | 35.0% | |
| ! | GGCAATTGATTTAGTTGATG+AGG | - | chr2_3:2348035-2348054 | Msa0271040:CDS | 35.0% |
| ATTGTGCTTCTGCAATTGTA+AGG | - | chr2_3:2348380-2348399 | Msa0271040:intron | 35.0% | |
| TATCAATTGCACCATATCGT+AGG | + | chr2_3:2348679-2348698 | None:intergenic | 35.0% | |
| ACGATATGGTGCAATTGATA+AGG | - | chr2_3:2348679-2348698 | Msa0271040:CDS | 35.0% | |
| ATATGGTGCAATTGATAAGG+TGG | - | chr2_3:2348682-2348701 | Msa0271040:CDS | 35.0% | |
| ! | AAAGAAAGGTTGATTGGACT+TGG | - | chr2_3:2348842-2348861 | Msa0271040:intron | 35.0% |
| AGGTTGCACAATATAGTTGT+GGG | - | chr2_3:2348869-2348888 | Msa0271040:intron | 35.0% | |
| TCACTACAGCATTTATTGCT+TGG | + | chr2_3:2348901-2348920 | None:intergenic | 35.0% | |
| !! | TCAAAAAGTATCACACTGTG+TGG | + | chr2_3:2349425-2349444 | None:intergenic | 35.0% |
| !! | TGTGATACTTTTTGAGCAAG+TGG | - | chr2_3:2349430-2349449 | Msa0271040:CDS | 35.0% |
| ATTATCATGACCTCAAACCT+TGG | - | chr2_3:2349554-2349573 | Msa0271040:CDS | 35.0% | |
| ACTTTCAGGAAAATGTACCA+TGG | - | chr2_3:2349598-2349617 | Msa0271040:CDS | 35.0% | |
| GAGATTGTTAATGCTGAAAC+GGG | - | chr2_3:2350151-2350170 | Msa0271040:intron | 35.0% | |
| AGATTGTTAATGCTGAAACG+GGG | - | chr2_3:2350152-2350171 | Msa0271040:intron | 35.0% | |
| TTAAAACATCGTCAGCTTTC+TGG | + | chr2_3:2350213-2350232 | None:intergenic | 35.0% | |
| !! | CATGTTATCTTTAGGGTGTT+TGG | + | chr2_3:2350248-2350267 | None:intergenic | 35.0% |
| TTGTTAAAGTTGTGTGTGAC+AGG | - | chr2_3:2350312-2350331 | Msa0271040:intron | 35.0% | |
| AGGTAAAAGATGAATCCTGC+TGG | - | chr2_3:2346877-2346896 | Msa0271040:intron | 40.0% | |
| AATTGAACTCTAACACCAGC+AGG | + | chr2_3:2346895-2346914 | None:intergenic | 40.0% | |
| ! | TTGATAGTCAGCCAAAGGAA+AGG | - | chr2_3:2346914-2346933 | Msa0271040:intron | 40.0% |
| TTCACTCTCTTCCTTTCCTT+TGG | + | chr2_3:2346928-2346947 | None:intergenic | 40.0% | |
| CCGTCTTGCAAATGTAAGTA+TGG | - | chr2_3:2346990-2347009 | Msa0271040:intron | 40.0% | |
| ATGTGACAAAAACGTGAAGC+AGG | - | chr2_3:2347236-2347255 | Msa0271040:CDS | 40.0% | |
| AACAGCTGTTGTTAAAGGGT+TGG | - | chr2_3:2347413-2347432 | Msa0271040:CDS | 40.0% | |
| TTGGCTCAGATGATAGGTAA+GGG | - | chr2_3:2347432-2347451 | Msa0271040:CDS | 40.0% | |
| !! | GATACGAGAGCATTAGTTTC+CGG | - | chr2_3:2347495-2347514 | Msa0271040:intron | 40.0% |
| GGATAGGAATACTTATAGGG+AGG | - | chr2_3:2347526-2347545 | Msa0271040:intron | 40.0% | |
| !!! | GAACGCTGTTTTGAAAGAAG+TGG | - | chr2_3:2347551-2347570 | Msa0271040:intron | 40.0% |
| CGAGGTGAAATTAGATGCAT+CGG | - | chr2_3:2347660-2347679 | Msa0271040:intron | 40.0% | |
| ACTTGAAAGGAGGTTTCAAC+AGG | - | chr2_3:2347731-2347750 | Msa0271040:intron | 40.0% | |
| GAGAAATATGAGGTTCGTCA+TGG | - | chr2_3:2347810-2347829 | Msa0271040:CDS | 40.0% | |
| ! | GTATTGGATGTGGATGGTTT+TGG | - | chr2_3:2347959-2347978 | Msa0271040:CDS | 40.0% |
| TTGAGGATAGCAATTTCCTC+TGG | + | chr2_3:2348096-2348115 | None:intergenic | 40.0% | |
| AGGAAATTGCTATCCTCAAC+AGG | - | chr2_3:2348097-2348116 | Msa0271040:CDS | 40.0% | |
| CTTCTGCAATTGTAAGGTAG+TGG | - | chr2_3:2348386-2348405 | Msa0271040:intron | 40.0% | |
| CGGAAAGAACTTGACAACTT+AGG | - | chr2_3:2348509-2348528 | Msa0271040:intron | 40.0% | |
| AGAGGATTGATGAGATTCGA+AGG | - | chr2_3:2348576-2348595 | Msa0271040:intron | 40.0% | |
| TGAAGAGCTTGTCTTATCTC+TGG | - | chr2_3:2348613-2348632 | Msa0271040:intron | 40.0% | |
| AGAGATTCAGACCTACGATA+TGG | - | chr2_3:2348665-2348684 | Msa0271040:CDS | 40.0% | |
| !! | AGCTTGAATGTAGCACTGAT+GGG | - | chr2_3:2348720-2348739 | Msa0271040:CDS | 40.0% |
| TTGATGTTGACAGACTCTGT+CGG | - | chr2_3:2348749-2348768 | Msa0271040:CDS | 40.0% | |
| ACAACCTCAGCTATTTGGTT+TGG | + | chr2_3:2348776-2348795 | None:intergenic | 40.0% | |
| !! | TTTATCATTTTGGCCAAGCC+AGG | + | chr2_3:2348825-2348844 | None:intergenic | 40.0% |
| CAGGTTGCACAATATAGTTG+TGG | - | chr2_3:2348868-2348887 | Msa0271040:intron | 40.0% | |
| !! | GTGAGATCTATAGCTGGTTT+TGG | - | chr2_3:2348917-2348936 | Msa0271040:intron | 40.0% |
| AAGGAACCAATTGGATATCG+AGG | + | chr2_3:2348947-2348966 | None:intergenic | 40.0% | |
| AGGAATAGGAAGGAACCAAT+TGG | + | chr2_3:2348956-2348975 | None:intergenic | 40.0% | |
| ! | ATTGGTTCCTTCCTATTCCT+TGG | - | chr2_3:2348956-2348975 | Msa0271040:intron | 40.0% |
| !!! | TTTGTTTTACCGACACCAGT+TGG | + | chr2_3:2348983-2349002 | None:intergenic | 40.0% |
| !! | CGGTAAAACAAAACTTGCTG+AGG | - | chr2_3:2348991-2349010 | Msa0271040:CDS | 40.0% |
| !! | GTTGGTGACTATGTACATGT+CGG | - | chr2_3:2349048-2349067 | Msa0271040:CDS | 40.0% |
| TATGTACATGTCGGACTACT+GGG | - | chr2_3:2349057-2349076 | Msa0271040:CDS | 40.0% | |
| CACTCTGTGTCAAGATTGAT+TGG | - | chr2_3:2349085-2349104 | Msa0271040:CDS | 40.0% | |
| GCTAACCTAATAACTTACCC+TGG | + | chr2_3:2349118-2349137 | None:intergenic | 40.0% | |
| TGTTAGGTATGTTGGACATG+AGG | - | chr2_3:2349364-2349383 | Msa0271040:CDS | 40.0% | |
| GACGATTAACTGAAGCTGTA+AGG | - | chr2_3:2349393-2349412 | Msa0271040:CDS | 40.0% | |
| TAACTGAAGCTGTAAGGAGA+AGG | - | chr2_3:2349399-2349418 | Msa0271040:CDS | 40.0% | |
| AATTATGGGAGGCTAACTGA+TGG | - | chr2_3:2349497-2349516 | Msa0271040:CDS | 40.0% | |
| ! | AAGGCAGAACTGTGGATTTT+AGG | - | chr2_3:2349522-2349541 | Msa0271040:CDS | 40.0% |
| AAGTCCACTTATGAGATGCT+CGG | + | chr2_3:2349582-2349601 | None:intergenic | 40.0% | |
| ! | CATCTCATAAGTGGACTTTC+AGG | - | chr2_3:2349584-2349603 | Msa0271040:CDS | 40.0% |
| !! | AGGAAGTGAGAAAGCATTTC+AGG | - | chr2_3:2349645-2349664 | Msa0271040:CDS | 40.0% |
| AACCTTGCAAACTTCCTCAA+TGG | + | chr2_3:2349728-2349747 | None:intergenic | 40.0% | |
| GTTTGCAAGGTTGCATATGA+AGG | - | chr2_3:2349736-2349755 | Msa0271040:intron | 40.0% | |
| ! | GCTAATCGTTTTGCTGAGAA+AGG | - | chr2_3:2349764-2349783 | Msa0271040:intron | 40.0% |
| GTGCTAGACCAACTAAAAAG+TGG | - | chr2_3:2349999-2350018 | Msa0271040:intron | 40.0% | |
| TTAAAGTTGTGTGTGACAGG+TGG | - | chr2_3:2350315-2350334 | Msa0271040:intron | 40.0% | |
| ! | ACACGGGCTATTAGTTAAGC+AGG | - | chr2_3:2346644-2346663 | Msa0271040:three_prime_UTR | 45.0% |
| ! | CACGGGCTATTAGTTAAGCA+GGG | - | chr2_3:2346645-2346664 | Msa0271040:three_prime_UTR | 45.0% |
| ! | TGGTCGAGATTTGGTTGAAG+AGG | - | chr2_3:2347281-2347300 | Msa0271040:CDS | 45.0% |
| ! | GAGATTTGGTTGAAGAGGCA+GGG | - | chr2_3:2347286-2347305 | Msa0271040:CDS | 45.0% |
| GGGAAACTTGATCCTGTTGT+CGG | - | chr2_3:2347306-2347325 | Msa0271040:CDS | 45.0% | |
| !! | AAAGGGTTGGCTCAGATGAT+AGG | - | chr2_3:2347426-2347445 | Msa0271040:CDS | 45.0% |
| ! | GTTGGCTCAGATGATAGGTA+AGG | - | chr2_3:2347431-2347450 | Msa0271040:CDS | 45.0% |
| TATTCCTATCCACTCAGCAC+CGG | + | chr2_3:2347517-2347536 | None:intergenic | 45.0% | |
| AGTGGAAGATGCTAAAGGGA+AGG | - | chr2_3:2347569-2347588 | Msa0271040:intron | 45.0% | |
| AGGATACAGCACTTGAAAGG+AGG | - | chr2_3:2347721-2347740 | Msa0271040:intron | 45.0% | |
| CGGCTGCAACAACAATTGAA+CGG | + | chr2_3:2347851-2347870 | None:intergenic | 45.0% | |
| GTGGATGTATTGGATGTGGA+TGG | - | chr2_3:2347953-2347972 | Msa0271040:CDS | 45.0% | |
| !! | TAGTTGATGAGGCTTGTGCA+AGG | - | chr2_3:2348046-2348065 | Msa0271040:CDS | 45.0% |
| !! | AGTTGATGAGGCTTGTGCAA+GGG | - | chr2_3:2348047-2348066 | Msa0271040:CDS | 45.0% |
| TCAACTTCATAGTCAGCCAG+AGG | - | chr2_3:2348077-2348096 | Msa0271040:CDS | 45.0% | |
| GTTGCATTCTCTTCCTGTTG+AGG | + | chr2_3:2348113-2348132 | None:intergenic | 45.0% | |
| TGACAACTTAGGAGACAAGC+TGG | - | chr2_3:2348520-2348539 | Msa0271040:intron | 45.0% | |
| AGAGCTTGTCTTATCTCTGG+AGG | - | chr2_3:2348616-2348635 | Msa0271040:intron | 45.0% | |
| ! | CAGCTTGAATGTAGCACTGA+TGG | - | chr2_3:2348719-2348738 | Msa0271040:CDS | 45.0% |
| !! | GCTTGAATGTAGCACTGATG+GGG | - | chr2_3:2348721-2348740 | Msa0271040:CDS | 45.0% |
| GGCTAACAACCTCAGCTATT+TGG | + | chr2_3:2348781-2348800 | None:intergenic | 45.0% | |
| !! | TTAGCCGATGGACTGGTATA+CGG | - | chr2_3:2348795-2348814 | Msa0271040:CDS | 45.0% |
| GCTGTAGTGAGATCTATAGC+TGG | - | chr2_3:2348911-2348930 | Msa0271040:intron | 45.0% | |
| GGAAGACCTCGATATCCAAT+TGG | - | chr2_3:2348938-2348957 | Msa0271040:intron | 45.0% | |
| AGTTGGTCCAAGGAATAGGA+AGG | + | chr2_3:2348966-2348985 | None:intergenic | 45.0% | |
| TTCCTATTCCTTGGACCAAC+TGG | - | chr2_3:2348965-2348984 | Msa0271040:CDS | 45.0% | |
| CTATGTACATGTCGGACTAC+TGG | - | chr2_3:2349056-2349075 | Msa0271040:CDS | 45.0% | |
| CTGCACCAGGGTAAGTTATT+AGG | - | chr2_3:2349110-2349129 | Msa0271040:CDS | 45.0% | |
| AGGTATGTTGGACATGAGGA+CGG | - | chr2_3:2349368-2349387 | Msa0271040:CDS | 45.0% | |
| TTATGAGATGCTCGGATCCA+AGG | + | chr2_3:2349574-2349593 | None:intergenic | 45.0% | |
| TTTATCGCGAGCAACTTCCA+TGG | + | chr2_3:2349618-2349637 | None:intergenic | 45.0% | |
| TGCTCGCGATAAAGTAATGC+AGG | - | chr2_3:2349625-2349644 | Msa0271040:CDS | 45.0% | |
| TCCAGCAGAGTCAACAATTG+TGG | + | chr2_3:2349671-2349690 | None:intergenic | 45.0% | |
| AGCCATTGAGGAAGTTTGCA+AGG | - | chr2_3:2349723-2349742 | Msa0271040:intron | 45.0% | |
| GAACAAGGTAGTGTCAAAGC+TGG | - | chr2_3:2350027-2350046 | Msa0271040:intron | 45.0% | |
| AGCTGGCTAGGATGCTTATA+AGG | - | chr2_3:2350044-2350063 | Msa0271040:intron | 45.0% | |
| ACAACGGTTTACGTTGATGC+TGG | - | chr2_3:2350085-2350104 | Msa0271040:intron | 45.0% | |
| TACGTTGATGCTGGTCAGAA+TGG | - | chr2_3:2350094-2350113 | Msa0271040:intron | 45.0% | |
| TGGTCAGAATGGAAGTGGTT+TGG | - | chr2_3:2350105-2350124 | Msa0271040:intron | 45.0% | |
| GAAGCAGGAACGCAAAGCTT+TGG | - | chr2_3:2347251-2347270 | Msa0271040:CDS | 50.0% | |
| ! | CGAGATTTGGTTGAAGAGGC+AGG | - | chr2_3:2347285-2347304 | Msa0271040:CDS | 50.0% |
| TCTTCATCACGTCCGACAAC+AGG | + | chr2_3:2347321-2347340 | None:intergenic | 50.0% | |
| CTTATAGGTGAGACGGGTGT+TGG | - | chr2_3:2347387-2347406 | Msa0271040:CDS | 50.0% | |
| ! | CATTAGTTTCCGGTGCTGAG+TGG | - | chr2_3:2347505-2347524 | Msa0271040:intron | 50.0% |
| ! | GCTTGTCTTATCTCTGGAGG+AGG | - | chr2_3:2348619-2348638 | Msa0271040:intron | 50.0% |
| CGGACCAAACCAAATAGCTG+AGG | - | chr2_3:2348769-2348788 | Msa0271040:CDS | 50.0% | |
| TAGCTGAGGTTGTTAGCCGA+TGG | - | chr2_3:2348783-2348802 | Msa0271040:CDS | 50.0% | |
| !! | TAGCCGATGGACTGGTATAC+GGG | - | chr2_3:2348796-2348815 | Msa0271040:CDS | 50.0% |
| TCACCCGTATACCAGTCCAT+CGG | + | chr2_3:2348802-2348821 | None:intergenic | 50.0% | |
| !! | GGTTGATTGGACTTGGTGAC+AGG | - | chr2_3:2348849-2348868 | Msa0271040:intron | 50.0% |
| CACCAGTTGGTCCAAGGAAT+AGG | + | chr2_3:2348970-2348989 | None:intergenic | 50.0% | |
| TTCCTTGGACCAACTGGTGT+CGG | - | chr2_3:2348971-2348990 | Msa0271040:CDS | 50.0% | |
| !! | AGATTGATTGGTGCTGCACC+AGG | - | chr2_3:2349097-2349116 | Msa0271040:CDS | 50.0% |
| !! | GATTGATTGGTGCTGCACCA+GGG | - | chr2_3:2349098-2349117 | Msa0271040:CDS | 50.0% |
| TATGTTGGACATGAGGACGG+TGG | - | chr2_3:2349371-2349390 | Msa0271040:CDS | 50.0% | |
| ! | TGATGGACAAGGCAGAACTG+TGG | - | chr2_3:2349514-2349533 | Msa0271040:CDS | 50.0% |
| ATGCTCGGATCCAAGGTTTG+AGG | + | chr2_3:2349567-2349586 | None:intergenic | 50.0% | |
| GGATCCGAGCATCTCATAAG+TGG | - | chr2_3:2349575-2349594 | Msa0271040:CDS | 50.0% | |
| !! | GCCACAATTGTTGACTCTGC+TGG | - | chr2_3:2349667-2349686 | Msa0271040:CDS | 50.0% |
| !! | TGCTGAGAAAGGCATCGCTT+TGG | - | chr2_3:2349775-2349794 | Msa0271040:intron | 50.0% |
| !! | TGAGAAAGGCATCGCTTTGG+CGG | - | chr2_3:2349778-2349797 | Msa0271040:intron | 50.0% |
| AGGTAGTGTCAAAGCTGGCT+AGG | - | chr2_3:2350032-2350051 | Msa0271040:intron | 50.0% | |
| GATGCTGGTCAGAATGGAAG+TGG | - | chr2_3:2350100-2350119 | Msa0271040:intron | 50.0% | |
| ATGCTGAAACGGGGTGAAGT+CGG | - | chr2_3:2350161-2350180 | Msa0271040:intron | 50.0% | |
| ! | GTTTCCGGTGCTGAGTGGAT+AGG | - | chr2_3:2347510-2347529 | Msa0271040:intron | 55.0% |
| ! | AGGGCGTCATCTTCCTGACA+AGG | - | chr2_3:2348014-2348033 | Msa0271040:CDS | 55.0% |
| GAGGTTGTTAGCCGATGGAC+TGG | - | chr2_3:2348788-2348807 | Msa0271040:CDS | 55.0% | |
| TACCGACACCAGTTGGTCCA+AGG | + | chr2_3:2348976-2348995 | None:intergenic | 55.0% | |
| ! | GGGAGGCTAACTGATGGACA+AGG | - | chr2_3:2349503-2349522 | Msa0271040:CDS | 55.0% |
| CTCAATGGCTCGCGAGAAAG+AGG | + | chr2_3:2349713-2349732 | None:intergenic | 55.0% | |
| CTCTTTCTCGCGAGCCATTG+AGG | - | chr2_3:2349711-2349730 | Msa0271040:intron | 55.0% | |
| ! | CTCTGGAGGAGGCTGACAGT+CGG | - | chr2_3:2348630-2348649 | Msa0271040:intron | 60.0% |
| ! | GGACTGGTATACGGGTGACC+TGG | - | chr2_3:2348804-2348823 | Msa0271040:CDS | 60.0% |
| GGTATACGGGTGACCTGGCT+TGG | - | chr2_3:2348809-2348828 | Msa0271040:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 2346487 | 2350365 | 2346487 | ID=Msa0271040;Name=Msa0271040 |
| chr2_3 | mRNA | 2346487 | 2350365 | 2346487 | ID=Msa0271040-mRNA-1;Parent=Msa0271040;Name=Msa0271040-mRNA-1;_AED=0.30;_eAED=0.30;_QI=41|1|0.85|1|0.83|0.71|7|188|776 |
| chr2_3 | exon | 2346487 | 2346860 | 2346487 | ID=Msa0271040-mRNA-1:exon:1171;Parent=Msa0271040-mRNA-1 |
| chr2_3 | exon | 2347005 | 2347482 | 2347005 | ID=Msa0271040-mRNA-1:exon:1170;Parent=Msa0271040-mRNA-1 |
| chr2_3 | exon | 2347733 | 2348346 | 2347733 | ID=Msa0271040-mRNA-1:exon:1169;Parent=Msa0271040-mRNA-1 |
| chr2_3 | exon | 2348655 | 2348836 | 2348655 | ID=Msa0271040-mRNA-1:exon:1168;Parent=Msa0271040-mRNA-1 |
| chr2_3 | exon | 2348958 | 2349711 | 2348958 | ID=Msa0271040-mRNA-1:exon:1167;Parent=Msa0271040-mRNA-1 |
| chr2_3 | exon | 2349850 | 2349973 | 2349850 | ID=Msa0271040-mRNA-1:exon:1166;Parent=Msa0271040-mRNA-1 |
| chr2_3 | exon | 2350332 | 2350365 | 2350332 | ID=Msa0271040-mRNA-1:exon:1165;Parent=Msa0271040-mRNA-1 |
| chr2_3 | five_prime_UTR | 2350332 | 2350365 | 2350332 | ID=Msa0271040-mRNA-1:five_prime_utr;Parent=Msa0271040-mRNA-1 |
| chr2_3 | five_prime_UTR | 2349967 | 2349973 | 2349967 | ID=Msa0271040-mRNA-1:five_prime_utr;Parent=Msa0271040-mRNA-1 |
| chr2_3 | CDS | 2349850 | 2349966 | 2349850 | ID=Msa0271040-mRNA-1:cds;Parent=Msa0271040-mRNA-1 |
| chr2_3 | CDS | 2348958 | 2349711 | 2348958 | ID=Msa0271040-mRNA-1:cds;Parent=Msa0271040-mRNA-1 |
| chr2_3 | CDS | 2348655 | 2348836 | 2348655 | ID=Msa0271040-mRNA-1:cds;Parent=Msa0271040-mRNA-1 |
| chr2_3 | CDS | 2347733 | 2348346 | 2347733 | ID=Msa0271040-mRNA-1:cds;Parent=Msa0271040-mRNA-1 |
| chr2_3 | CDS | 2347005 | 2347482 | 2347005 | ID=Msa0271040-mRNA-1:cds;Parent=Msa0271040-mRNA-1 |
| chr2_3 | CDS | 2346675 | 2346860 | 2346675 | ID=Msa0271040-mRNA-1:cds;Parent=Msa0271040-mRNA-1 |
| chr2_3 | three_prime_UTR | 2346487 | 2346674 | 2346487 | ID=Msa0271040-mRNA-1:three_prime_utr;Parent=Msa0271040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
