Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309350 | XP_013457978.1 | 73.598 | 731 | 170 | 6 | 65 | 776 | 150 | 876 | 0.0 | 1057 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309350 | sp|P42730|CLPB1_ARATH | 69.780 | 728 | 197 | 7 | 65 | 776 | 150 | 870 | 0.0 | 998 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005350 | Msa0309350 | 0.804202 | 2.418885e-49 | -8.615850e-47 |
| Msa0011720 | Msa0309350 | 0.811869 | 5.641851e-51 | -8.615850e-47 |
| Msa0050760 | Msa0309350 | 0.810336 | 1.212776e-50 | -8.615850e-47 |
| Msa0053900 | Msa0309350 | 0.839366 | 1.654419e-57 | -8.615850e-47 |
| Msa0097990 | Msa0309350 | 0.810398 | 1.175858e-50 | -8.615850e-47 |
| Msa0099730 | Msa0309350 | 0.804896 | 1.733557e-49 | -8.615850e-47 |
| Msa0139720 | Msa0309350 | -0.808540 | 2.945856e-50 | -8.615850e-47 |
| Msa0141100 | Msa0309350 | 0.811983 | 5.328939e-51 | -8.615850e-47 |
| Msa0148340 | Msa0309350 | 0.842877 | 1.976990e-58 | -8.615850e-47 |
| Msa0148360 | Msa0309350 | 0.838053 | 3.614358e-57 | -8.615850e-47 |
| Msa0151690 | Msa0309350 | 0.800940 | 1.138517e-48 | -8.615850e-47 |
| Msa0172350 | Msa0309350 | 0.803118 | 4.061340e-49 | -8.615850e-47 |
| Msa0173090 | Msa0309350 | 0.802858 | 4.595740e-49 | -8.615850e-47 |
| Msa0188680 | Msa0309350 | -0.822111 | 2.820910e-53 | -8.615850e-47 |
| Msa0191040 | Msa0309350 | 0.826985 | 2.008627e-54 | -8.615850e-47 |
| Msa0223100 | Msa0309350 | 0.802322 | 5.927892e-49 | -8.615850e-47 |
| Msa0223290 | Msa0309350 | 0.805882 | 1.077050e-49 | -8.615850e-47 |
| Msa0223380 | Msa0309350 | 0.824544 | 7.620060e-54 | -8.615850e-47 |
| Msa0225600 | Msa0309350 | 0.802758 | 4.819737e-49 | -8.615850e-47 |
| Msa0233340 | Msa0309350 | 0.827598 | 1.432120e-54 | -8.615850e-47 |
| Msa0236440 | Msa0309350 | 0.923819 | 1.605687e-89 | -8.615850e-47 |
| Msa0243690 | Msa0309350 | 0.828593 | 8.249930e-55 | -8.615850e-47 |
| Msa0260810 | Msa0309350 | 0.800841 | 1.192898e-48 | -8.615850e-47 |
| Msa0266450 | Msa0309350 | 0.812802 | 3.530191e-51 | -8.615850e-47 |
| Msa0270220 | Msa0309350 | -0.827190 | 1.793503e-54 | -8.615850e-47 |
| Msa0271040 | Msa0309350 | 0.998504 | 4.878315e-267 | -8.615850e-47 |
| Msa0277530 | Msa0309350 | 0.807347 | 5.283692e-50 | -8.615850e-47 |
| Msa0304330 | Msa0309350 | 0.803618 | 3.199644e-49 | -8.615850e-47 |
| Msa0307830 | Msa0309350 | -0.830123 | 3.505201e-55 | -8.615850e-47 |
| Msa0309350 | Msa0311690 | 0.827105 | 1.880396e-54 | -8.615850e-47 |
| Msa0309350 | Msa0371420 | -0.812651 | 3.807921e-51 | -8.615850e-47 |
| Msa0309350 | Msa0371560 | 0.806846 | 6.745208e-50 | -8.615850e-47 |
| Msa0309350 | Msa0374850 | 0.812834 | 3.472337e-51 | -8.615850e-47 |
| Msa0309350 | Msa0375090 | 0.806554 | 7.775265e-50 | -8.615850e-47 |
| Msa0309350 | Msa0419620 | -0.806734 | 7.125261e-50 | -8.615850e-47 |
| Msa0309350 | Msa0426330 | 0.804756 | 1.854168e-49 | -8.615850e-47 |
| Msa0309350 | Msa0431830 | 0.811108 | 8.257365e-51 | -8.615850e-47 |
| Msa0309350 | Msa0464900 | 0.824395 | 8.263713e-54 | -8.615850e-47 |
| Msa0309350 | Msa0465680 | -0.816844 | 4.483931e-52 | -8.615850e-47 |
| Msa0309350 | Msa0470340 | 0.806852 | 6.725654e-50 | -8.615850e-47 |
| Msa0309350 | Msa0480950 | 0.802473 | 5.517619e-49 | -8.615850e-47 |
| Msa0309350 | Msa0484780 | 0.811004 | 8.694749e-51 | -8.615850e-47 |
| Msa0309350 | Msa0508200 | 0.800892 | 1.164388e-48 | -8.615850e-47 |
| Msa0309350 | Msa0508610 | 0.802059 | 6.713868e-49 | -8.615850e-47 |
| Msa0309350 | Msa0508650 | 0.806628 | 7.501941e-50 | -8.615850e-47 |
| Msa0309350 | Msa0511720 | -0.807936 | 3.961776e-50 | -8.615850e-47 |
| Msa0309350 | Msa0517330 | 0.808992 | 2.357532e-50 | -8.615850e-47 |
| Msa0309350 | Msa0517340 | 0.801317 | 9.534295e-49 | -8.615850e-47 |
| Msa0309350 | Msa0531430 | 0.816950 | 4.245426e-52 | -8.615850e-47 |
| Msa0309350 | Msa0534590 | 0.829788 | 4.230616e-55 | -8.615850e-47 |
| Msa0309350 | Msa0555950 | 0.807729 | 4.384165e-50 | -8.615850e-47 |
| Msa0309350 | Msa0579340 | 0.813330 | 2.702980e-51 | -8.615850e-47 |
| Msa0309350 | Msa0590800 | 0.814747 | 1.316285e-51 | -8.615850e-47 |
| Msa0309350 | Msa0610370 | 0.810294 | 1.238189e-50 | -8.615850e-47 |
| Msa0309350 | Msa0611380 | 0.817527 | 3.148983e-52 | -8.615850e-47 |
| Msa0309350 | Msa0621890 | 0.804850 | 1.772176e-49 | -8.615850e-47 |
| Msa0309350 | Msa0622340 | 0.808312 | 3.293984e-50 | -8.615850e-47 |
| Msa0309350 | Msa0628640 | 0.800367 | 1.490344e-48 | -8.615850e-47 |
| Msa0309350 | Msa0631120 | 0.835047 | 2.106216e-56 | -8.615850e-47 |
| Msa0309350 | Msa0638280 | 0.802347 | 5.857871e-49 | -8.615850e-47 |
| Msa0309350 | Msa0666030 | 0.814529 | 1.471131e-51 | -8.615850e-47 |
| Msa0309350 | Msa0669340 | 0.835036 | 2.119122e-56 | -8.615850e-47 |
| Msa0309350 | Msa0694250 | 0.801300 | 9.610625e-49 | -8.615850e-47 |
| Msa0309350 | Msa0717260 | 0.814859 | 1.243137e-51 | -8.615850e-47 |
| Msa0309350 | Msa0731710 | 0.815255 | 1.015342e-51 | -8.615850e-47 |
| Msa0309350 | Msa0758320 | 0.816421 | 5.578455e-52 | -8.615850e-47 |
| Msa0309350 | Msa0775440 | 0.809288 | 2.037713e-50 | -8.615850e-47 |
| Msa0309350 | Msa0790390 | -0.824172 | 9.322965e-54 | -8.615850e-47 |
| Msa0309350 | Msa0799700 | 0.826450 | 2.694853e-54 | -8.615850e-47 |
| Msa0309350 | Msa0810020 | 0.805483 | 1.306341e-49 | -8.615850e-47 |
| Msa0309350 | Msa0812820 | 0.824146 | 9.454441e-54 | -8.615850e-47 |
| Msa0309350 | Msa0837980 | 0.807793 | 4.250200e-50 | -8.615850e-47 |
| Msa0309350 | Msa0853320 | 0.836231 | 1.056231e-56 | -8.615850e-47 |
| Msa0309350 | Msa0855310 | 0.812113 | 4.992260e-51 | -8.615850e-47 |
| Msa0309350 | Msa0870620 | 0.804241 | 2.374736e-49 | -8.615850e-47 |
| Msa0309350 | Msa0870690 | 0.829028 | 6.473035e-55 | -8.615850e-47 |
| Msa0309350 | Msa0880710 | 0.826430 | 2.724837e-54 | -8.615850e-47 |
| Msa0309350 | Msa0882510 | 0.806539 | 7.830263e-50 | -8.615850e-47 |
| Msa0309350 | Msa0899230 | 0.803077 | 4.140801e-49 | -8.615850e-47 |
| Msa0309350 | Msa0908170 | 0.841491 | 4.601337e-58 | -8.615850e-47 |
| Msa0309350 | Msa0926800 | 0.817631 | 2.982679e-52 | -8.615850e-47 |
| Msa0309350 | Msa0927670 | 0.810586 | 1.070950e-50 | -8.615850e-47 |
| Msa0309350 | Msa0937240 | 0.804240 | 2.375499e-49 | -8.615850e-47 |
| Msa0309350 | Msa0946080 | 0.803298 | 3.726778e-49 | -8.615850e-47 |
| Msa0309350 | Msa0965520 | 0.802249 | 6.136018e-49 | -8.615850e-47 |
| Msa0309350 | Msa0974530 | 0.807751 | 4.338013e-50 | -8.615850e-47 |
| Msa0309350 | Msa0999040 | 0.805422 | 1.345072e-49 | -8.615850e-47 |
| Msa0309350 | Msa1033560 | 0.823000 | 1.753063e-53 | -8.615850e-47 |
| Msa0309350 | Msa1037700 | -0.818930 | 1.515439e-52 | -8.615850e-47 |
| Msa0309350 | Msa1073350 | 0.816384 | 5.687319e-52 | -8.615850e-47 |
| Msa0309350 | Msa1113850 | 0.817981 | 2.487175e-52 | -8.615850e-47 |
| Msa0309350 | Msa1130210 | -0.820142 | 8.018677e-53 | -8.615850e-47 |
| Msa0309350 | Msa1132560 | -0.814163 | 1.772378e-51 | -8.615850e-47 |
| Msa0309350 | Msa1142500 | 0.818749 | 1.666324e-52 | -8.615850e-47 |
| Msa0309350 | Msa1160400 | 0.805567 | 1.254108e-49 | -8.615850e-47 |
| Msa0309350 | Msa1187530 | 0.806138 | 9.513889e-50 | -8.615850e-47 |
| Msa0309350 | Msa1190120 | 0.803375 | 3.592358e-49 | -8.615850e-47 |
| Msa0309350 | Msa1214880 | 0.805636 | 1.213350e-49 | -8.615850e-47 |
| Msa0309350 | Msa1217810 | 0.805046 | 1.612739e-49 | -8.615850e-47 |
| Msa0309350 | Msa1218480 | 0.840267 | 9.640344e-58 | -8.615850e-47 |
| Msa0309350 | Msa1218650 | 0.806030 | 1.002714e-49 | -8.615850e-47 |
| Msa0309350 | Msa1219260 | 0.806642 | 7.449864e-50 | -8.615850e-47 |
| Msa0309350 | Msa1233500 | 0.810919 | 9.071688e-51 | -8.615850e-47 |
| Msa0309350 | Msa1255280 | 0.803422 | 3.513253e-49 | -8.615850e-47 |
| Msa0309350 | Msa1258050 | 0.814449 | 1.532135e-51 | -8.615850e-47 |
| Msa0309350 | Msa1266960 | 0.810698 | 1.013014e-50 | -8.615850e-47 |
| Msa0309350 | Msa1282920 | 0.805018 | 1.634519e-49 | -8.615850e-47 |
| Msa0309350 | Msa1291870 | 0.806736 | 7.116313e-50 | -8.615850e-47 |
| Msa0309350 | Msa1300860 | 0.805244 | 1.466206e-49 | -8.615850e-47 |
| Msa0309350 | Msa1331920 | 0.801337 | 9.444541e-49 | -8.615850e-47 |
| Msa0309350 | Msa1362510 | 0.815603 | 8.495444e-52 | -8.615850e-47 |
| Msa0309350 | Msa1397250 | 0.814871 | 1.235727e-51 | -8.615850e-47 |
| Msa0309350 | Msa1397340 | 0.998584 | 1.524702e-269 | -8.615850e-47 |
| Msa0309350 | Msa1399560 | 0.810061 | 1.389728e-50 | -8.615850e-47 |
| Msa0309350 | Msa1401150 | 0.801076 | 1.068102e-48 | -8.615850e-47 |
| Msa0309350 | Msa1403580 | -0.817878 | 2.624627e-52 | -8.615850e-47 |
| Msa0309350 | Msa1419110 | 0.812958 | 3.261583e-51 | -8.615850e-47 |
| Msa0309350 | Msa1429420 | 0.802452 | 5.573133e-49 | -8.615850e-47 |
| Msa0309350 | Msa1439230 | 0.807035 | 6.151268e-50 | -8.615850e-47 |
| Msa0309350 | Msa1440340 | 0.830158 | 3.437971e-55 | -8.615850e-47 |
| Msa0309350 | Msa1440600 | 0.808029 | 3.785799e-50 | -8.615850e-47 |
| Msa0309350 | Msa1443290 | -0.823577 | 1.285204e-53 | -8.615850e-47 |
| Msa0309350 | Msa1450020 | 0.806266 | 8.940978e-50 | -8.615850e-47 |
| Msa0309350 | Msa1454110 | 0.805997 | 1.018601e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309350 | MtrunA17_Chr4g0061371 | 73.598 | 731 | 170 | 6 | 65 | 776 | 150 | 876 | 0.0 | 1057 |
| Msa0309350 | MtrunA17_Chr7g0225161 | 73.007 | 715 | 173 | 6 | 81 | 776 | 162 | 875 | 0.0 | 1010 |
| Msa0309350 | MtrunA17_Chr7g0218421 | 48.373 | 707 | 339 | 7 | 73 | 753 | 233 | 939 | 0.0 | 639 |
| Msa0309350 | MtrunA17_Chr6g0454071 | 48.023 | 708 | 342 | 7 | 72 | 753 | 228 | 935 | 0.0 | 637 |
| Msa0309350 | MtrunA17_Chr3g0137071 | 46.713 | 715 | 354 | 7 | 72 | 759 | 240 | 954 | 0.0 | 609 |
| Msa0309350 | MtrunA17_Chr2g0329561 | 63.924 | 474 | 160 | 4 | 307 | 775 | 4 | 471 | 0.0 | 587 |
| Msa0309350 | MtrunA17_Chr2g0329561 | 65.152 | 66 | 14 | 2 | 1 | 57 | 1 | 66 | 2.85e-15 | 79.3 |
| Msa0309350 | MtrunA17_Chr3g0131711 | 40.084 | 711 | 336 | 12 | 82 | 761 | 254 | 905 | 2.04e-158 | 483 |
| Msa0309350 | MtrunA17_Chr3g0134631 | 39.324 | 740 | 355 | 13 | 59 | 761 | 228 | 910 | 3.77e-156 | 478 |
| Msa0309350 | MtrunA17_Chr8g0385811 | 38.679 | 742 | 357 | 14 | 59 | 761 | 227 | 909 | 1.07e-155 | 476 |
| Msa0309350 | MtrunA17_Chr3g0131351 | 37.483 | 715 | 352 | 14 | 82 | 761 | 297 | 951 | 5.13e-139 | 434 |
| Msa0309350 | MtrunA17_Chr2g0277781 | 68.562 | 299 | 83 | 4 | 447 | 740 | 2 | 294 | 3.00e-134 | 399 |
| Msa0309350 | MtrunA17_Chr3g0102771 | 43.168 | 322 | 174 | 4 | 438 | 752 | 453 | 772 | 2.62e-83 | 283 |
| Msa0309350 | MtrunA17_Chr3g0102771 | 41.270 | 252 | 125 | 6 | 73 | 311 | 197 | 438 | 2.80e-42 | 165 |
| Msa0309350 | MtrunA17_Chr2g0277771 | 76.433 | 157 | 32 | 1 | 620 | 776 | 1 | 152 | 2.49e-76 | 244 |
| Msa0309350 | MtrunA17_Chr3g0135231 | 48.560 | 243 | 103 | 7 | 102 | 330 | 261 | 495 | 2.72e-52 | 193 |
| Msa0309350 | MtrunA17_Chr3g0135231 | 40.206 | 97 | 58 | 0 | 577 | 673 | 546 | 642 | 3.81e-13 | 73.2 |
| Msa0309350 | MtrunA17_Chr7g0260941 | 54.140 | 157 | 27 | 2 | 620 | 776 | 1 | 112 | 1.88e-43 | 153 |
| Msa0309350 | MtrunA17_Chr7g0260931 | 66.316 | 95 | 28 | 1 | 434 | 524 | 1 | 95 | 2.36e-33 | 123 |
| Msa0309350 | MtrunA17_Chr1g0188061 | 48.837 | 86 | 44 | 0 | 531 | 616 | 232 | 317 | 1.45e-21 | 97.1 |
| Msa0309350 | MtrunA17_Chr2g0277791 | 61.111 | 72 | 27 | 1 | 368 | 439 | 1 | 71 | 4.85e-18 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309350 | AT1G74310.1 | 69.780 | 728 | 197 | 7 | 65 | 776 | 150 | 870 | 0.0 | 998 |
| Msa0309350 | AT1G74310.2 | 71.064 | 667 | 173 | 5 | 65 | 715 | 150 | 812 | 0.0 | 931 |
| Msa0309350 | AT5G15450.1 | 47.458 | 708 | 345 | 8 | 72 | 753 | 226 | 932 | 0.0 | 637 |
| Msa0309350 | AT2G25140.1 | 46.556 | 726 | 358 | 8 | 72 | 767 | 231 | 956 | 0.0 | 619 |
| Msa0309350 | AT4G14670.1 | 61.212 | 495 | 174 | 6 | 81 | 558 | 127 | 620 | 0.0 | 557 |
| Msa0309350 | AT5G50920.1 | 40.510 | 706 | 334 | 13 | 82 | 758 | 256 | 904 | 3.62e-157 | 481 |
| Msa0309350 | AT3G48870.2 | 40.395 | 708 | 336 | 16 | 83 | 761 | 247 | 897 | 1.09e-153 | 471 |
| Msa0309350 | AT3G48870.1 | 40.395 | 708 | 336 | 16 | 83 | 761 | 278 | 928 | 5.38e-153 | 471 |
| Msa0309350 | AT3G48870.4 | 40.395 | 708 | 336 | 16 | 83 | 761 | 278 | 928 | 5.38e-153 | 471 |
| Msa0309350 | AT3G48870.3 | 40.395 | 708 | 336 | 16 | 83 | 761 | 278 | 928 | 5.38e-153 | 471 |
| Msa0309350 | AT5G51070.1 | 35.944 | 715 | 368 | 12 | 71 | 751 | 259 | 917 | 2.32e-131 | 414 |
| Msa0309350 | AT4G14675.1 | 39.189 | 148 | 58 | 1 | 620 | 767 | 1 | 116 | 4.03e-31 | 119 |
| Msa0309350 | AT3G45450.1 | 39.459 | 185 | 84 | 5 | 95 | 267 | 151 | 319 | 1.44e-24 | 106 |
Find 174 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACCTTTCTTTATCATTT+TGG | 0.120981 | 2_4:+3803520 | None:intergenic |
| CGCAAAGCTTTGGAAATTTA+TGG | 0.135274 | 2_4:-3805091 | Msa0309350:CDS |
| CTGCTTGAAGTCTTAAATTA+TGG | 0.168550 | 2_4:-3802869 | Msa0309350:CDS |
| TTAAAACATCGTCAGCTTTC+TGG | 0.178386 | 2_4:+3802141 | None:intergenic |
| TATTCAAACATGTTATCTTT+AGG | 0.205522 | 2_4:+3802098 | None:intergenic |
| GAGAGTGAAACTTCTTTCTT+TGG | 0.210286 | 2_4:-3805413 | Msa0309350:CDS |
| GGCTAACAACCTCAGCTATT+TGG | 0.215789 | 2_4:+3803574 | None:intergenic |
| CATCTCATAAGTGGACTTTC+AGG | 0.227432 | 2_4:-3802767 | Msa0309350:CDS |
| ATTCAAACATGTTATCTTTA+GGG | 0.236416 | 2_4:+3802099 | None:intergenic |
| GGTAAAACAGCTGTTGTTAA+AGG | 0.241250 | 2_4:-3804944 | Msa0309350:CDS |
| CATGTTATCTTTAGGGTGTT+TGG | 0.241398 | 2_4:+3802106 | None:intergenic |
| AGAAGTGCAACTTTATTCTT+TGG | 0.244608 | 2_4:-3804218 | Msa0309350:CDS |
| AGTAACAATATTGTTCTTAT+AGG | 0.275043 | 2_4:-3804980 | Msa0309350:CDS |
| TTCACTCTCTTCCTTTCCTT+TGG | 0.285941 | 2_4:+3805427 | None:intergenic |
| GAGTGGATAGGAATACTTAT+AGG | 0.307426 | 2_4:-3804830 | Msa0309350:CDS |
| GTGAGATCTATAGCTGGTTT+TGG | 0.315276 | 2_4:-3803435 | Msa0309350:CDS |
| GATACGAGAGCATTAGTTTC+CGG | 0.328531 | 2_4:-3804857 | Msa0309350:CDS |
| ACGTGATGAAGAAATAATTA+AGG | 0.328816 | 2_4:-3805023 | Msa0309350:CDS |
| TTCCTATTCCTTGGACCAAC+TGG | 0.338075 | 2_4:-3803387 | Msa0309350:CDS |
| AGCTGGCTAGGATGCTTATA+AGG | 0.347885 | 2_4:-3802307 | Msa0309350:CDS |
| ATTGGTTCCTTCCTATTCCT+TGG | 0.353308 | 2_4:-3803396 | Msa0309350:CDS |
| AGAGTGAAACTTCTTTCTTT+GGG | 0.355201 | 2_4:-3805412 | Msa0309350:CDS |
| GGAAATTTATGGTCGAGATT+TGG | 0.362675 | 2_4:-3805080 | Msa0309350:CDS |
| TGCTTGAAGTCTTAAATTAT+GGG | 0.364404 | 2_4:-3802868 | Msa0309350:CDS |
| AGGAAGTGAGAAAGCATTTC+AGG | 0.372211 | 2_4:-3802706 | Msa0309350:CDS |
| TGAAGTTAAGTTAATTGCTT+TGG | 0.375671 | 2_4:-3804879 | Msa0309350:CDS |
| TTTGTTGTATTGTAGGAGTA+TGG | 0.377687 | 2_4:-3802374 | Msa0309350:intron |
| AATTGAATTGTTAGGTATGT+TGG | 0.377879 | 2_4:-3802995 | Msa0309350:intron |
| AATGATAAAGAAAGGTTGAT+TGG | 0.380463 | 2_4:-3803516 | Msa0309350:CDS |
| CTATGTACATGTCGGACTAC+TGG | 0.383161 | 2_4:-3803296 | Msa0309350:CDS |
| TTGTCTAGTCAGTACATATC+TGG | 0.387411 | 2_4:-3804479 | Msa0309350:intron |
| AAACAACACCTGATGAATAT+AGG | 0.391432 | 2_4:-3804667 | Msa0309350:CDS |
| AACTTTATTCTTTGGAGAAA+AGG | 0.394568 | 2_4:-3804210 | Msa0309350:CDS |
| GTAAAACAGCTGTTGTTAAA+GGG | 0.407230 | 2_4:-3804943 | Msa0309350:CDS |
| AGTGGATAGGAATACTTATA+GGG | 0.409625 | 2_4:-3804829 | Msa0309350:CDS |
| TTAGCCGATGGACTGGTATA+CGG | 0.410456 | 2_4:-3803557 | Msa0309350:CDS |
| ACATATTTCCTATATTCATC+AGG | 0.416945 | 2_4:+3804659 | None:intergenic |
| ACAACCTCAGCTATTTGGTT+TGG | 0.418309 | 2_4:+3803579 | None:intergenic |
| CGAGATTTGGTTGAAGAGGC+AGG | 0.431684 | 2_4:-3805067 | Msa0309350:CDS |
| AGGAAATTGCTATCCTCAAC+AGG | 0.434988 | 2_4:-3804255 | Msa0309350:CDS |
| CACCAGTTGGTCCAAGGAAT+AGG | 0.436137 | 2_4:+3803385 | None:intergenic |
| TCTTCATCACGTCCGACAAC+AGG | 0.439800 | 2_4:+3805034 | None:intergenic |
| GAAGCAGGAACGCAAAGCTT+TGG | 0.443169 | 2_4:-3805101 | Msa0309350:CDS |
| TCACTACAGCATTTATTGCT+TGG | 0.445015 | 2_4:+3803454 | None:intergenic |
| ACTAAATCAATTGCCTTGTC+AGG | 0.445782 | 2_4:+3804325 | None:intergenic |
| ACTTTATTCTTTGGAGAAAA+GGG | 0.451139 | 2_4:-3804209 | Msa0309350:CDS |
| AAAGGGTTGGCTCAGATGAT+AGG | 0.452018 | 2_4:-3804926 | Msa0309350:CDS |
| ACTTGAAAGGAGGTTTCAAC+AGG | 0.453211 | 2_4:-3804621 | Msa0309350:CDS |
| TGCTGAGAAAGGCATCGCTT+TGG | 0.455960 | 2_4:-3802576 | Msa0309350:CDS |
| GCCACAATTGTTGACTCTGC+TGG | 0.457766 | 2_4:-3802684 | Msa0309350:CDS |
| AGCTTCTAAATGTGTGCAAA+AGG | 0.459813 | 2_4:-3805180 | Msa0309350:CDS |
| CATACTTACATTTGCAAGAC+GGG | 0.460559 | 2_4:+3805363 | None:intergenic |
| TGAAGAGCTTGTCTTATCTC+TGG | 0.460699 | 2_4:-3803739 | Msa0309350:CDS |
| CTCTTTCTCGCGAGCCATTG+AGG | 0.464567 | 2_4:-3802640 | Msa0309350:CDS |
| AGATTGATTGGTGCTGCACC+AGG | 0.464646 | 2_4:-3803255 | Msa0309350:CDS |
| AGAGATTCAGACCTACGATA+TGG | 0.469603 | 2_4:-3803687 | Msa0309350:CDS |
| GGAAGACCTCGATATCCAAT+TGG | 0.469840 | 2_4:-3803414 | Msa0309350:CDS |
| GTTTGCAAGGTTGCATATGA+AGG | 0.471807 | 2_4:-3802615 | Msa0309350:CDS |
| TTGTTAAAGTTGTGTGTGAC+AGG | 0.473261 | 2_4:-3802039 | Msa0309350:three_prime_UTR |
| GTTGCATTCTCTTCCTGTTG+AGG | 0.477862 | 2_4:+3804242 | None:intergenic |
| GAGATTGTTAATGCTGAAAC+GGG | 0.478591 | 2_4:-3802200 | Msa0309350:CDS |
| TTGAGGATAGCAATTTCCTC+TGG | 0.479416 | 2_4:+3804259 | None:intergenic |
| CTCAATGGCTCGCGAGAAAG+AGG | 0.479438 | 2_4:+3802641 | None:intergenic |
| AGGAATAGGAAGGAACCAAT+TGG | 0.479821 | 2_4:+3803399 | None:intergenic |
| CACTCTGTGTCAAGATTGAT+TGG | 0.480315 | 2_4:-3803267 | Msa0309350:CDS |
| AGAGATTGTTAATGCTGAAA+CGG | 0.482511 | 2_4:-3802201 | Msa0309350:CDS |
| ATATAGGAAATATGTGGAAA+AGG | 0.487573 | 2_4:-3804651 | Msa0309350:CDS |
| TGAGAAAGGCATCGCTTTGG+CGG | 0.490554 | 2_4:-3802573 | Msa0309350:CDS |
| CAGCTTGAATGTAGCACTGA+TGG | 0.492920 | 2_4:-3803633 | Msa0309350:CDS |
| AAGAAGTGGAAGATGCTAAA+GGG | 0.493762 | 2_4:-3804787 | Msa0309350:CDS |
| GGCAATTGATTTAGTTGATG+AGG | 0.493813 | 2_4:-3804317 | Msa0309350:CDS |
| GGTATACGGGTGACCTGGCT+TGG | 0.494771 | 2_4:-3803543 | Msa0309350:CDS |
| TACGTTGATGCTGGTCAGAA+TGG | 0.496544 | 2_4:-3802257 | Msa0309350:CDS |
| GACGATTAACTGAAGCTGTA+AGG | 0.498021 | 2_4:-3802958 | Msa0309350:CDS |
| ATTATCATGACCTCAAACCT+TGG | 0.498059 | 2_4:-3802797 | Msa0309350:CDS |
| TGCTCGCGATAAAGTAATGC+AGG | 0.506751 | 2_4:-3802726 | Msa0309350:CDS |
| AACAGCTGTTGTTAAAGGGT+TGG | 0.511916 | 2_4:-3804939 | Msa0309350:CDS |
| AGCTTGAATGTAGCACTGAT+GGG | 0.513937 | 2_4:-3803632 | Msa0309350:CDS |
| TTATGAGATGCTCGGATCCA+AGG | 0.515420 | 2_4:+3802780 | None:intergenic |
| GGTTGATTGGACTTGGTGAC+AGG | 0.517013 | 2_4:-3803503 | Msa0309350:CDS |
| CTTATAGGTGAGACGGGTGT+TGG | 0.518084 | 2_4:-3804965 | Msa0309350:CDS |
| ATTGTTCTTATAGGTGAGAC+GGG | 0.519936 | 2_4:-3804971 | Msa0309350:CDS |
| ATTTCACCTCGATCAAACAT+AGG | 0.520140 | 2_4:+3804704 | None:intergenic |
| AAAGAAGTGGAAGATGCTAA+AGG | 0.521154 | 2_4:-3804788 | Msa0309350:CDS |
| ACGATATGGTGCAATTGATA+AGG | 0.521944 | 2_4:-3803673 | Msa0309350:CDS |
| AGTTTAGTAAAGAGAAAGAG+AGG | 0.523045 | 2_4:-3803794 | Msa0309350:CDS |
| AAAGAAAGGTTGATTGGACT+TGG | 0.524278 | 2_4:-3803510 | Msa0309350:CDS |
| GAGGTTGTTAGCCGATGGAC+TGG | 0.524764 | 2_4:-3803564 | Msa0309350:CDS |
| AACCTTGCAAACTTCCTCAA+TGG | 0.527609 | 2_4:+3802626 | None:intergenic |
| TATGTACATGTCGGACTACT+GGG | 0.531978 | 2_4:-3803295 | Msa0309350:CDS |
| TAGCCGATGGACTGGTATAC+GGG | 0.532823 | 2_4:-3803556 | Msa0309350:CDS |
| ACAACGGTTTACGTTGATGC+TGG | 0.534660 | 2_4:-3802266 | Msa0309350:CDS |
| CGGAAAGAACTTGACAACTT+AGG | 0.542188 | 2_4:-3803843 | Msa0309350:CDS |
| GATACTATTAGTATACTTCG+TGG | 0.545801 | 2_4:-3804572 | Msa0309350:CDS |
| GTTGGCTCAGATGATAGGTA+AGG | 0.546382 | 2_4:-3804921 | Msa0309350:CDS |
| GGATCCGAGCATCTCATAAG+TGG | 0.547581 | 2_4:-3802776 | Msa0309350:CDS |
| ATGCTGAAACGGGGTGAAGT+CGG | 0.548592 | 2_4:-3802190 | Msa0309350:exon |
| TGATGAATATAGGAAATATG+TGG | 0.549577 | 2_4:-3804657 | Msa0309350:CDS |
| TGACAACTTAGGAGACAAGC+TGG | 0.549649 | 2_4:-3803832 | Msa0309350:CDS |
| TTGGCCAAAATGATAAAGAA+AGG | 0.551097 | 2_4:-3803524 | Msa0309350:CDS |
| TATTGTTCTTATAGGTGAGA+CGG | 0.551849 | 2_4:-3804972 | Msa0309350:CDS |
| AATTGAACTCTAACACCAGC+AGG | 0.554311 | 2_4:+3805460 | None:intergenic |
| GAGTGAAACTTCTTTCTTTG+GGG | 0.554927 | 2_4:-3805411 | Msa0309350:CDS |
| GGGAAACTTGATCCTGTTGT+CGG | 0.555369 | 2_4:-3805046 | Msa0309350:CDS |
| TTCCTTGGACCAACTGGTGT+CGG | 0.556177 | 2_4:-3803381 | Msa0309350:CDS |
| AGCCATTGAGGAAGTTTGCA+AGG | 0.558014 | 2_4:-3802628 | Msa0309350:CDS |
| CGAGGTGAAATTAGATGCAT+CGG | 0.558598 | 2_4:-3804692 | Msa0309350:CDS |
| GTTTCCGGTGCTGAGTGGAT+AGG | 0.559043 | 2_4:-3804842 | Msa0309350:CDS |
| TACCGACACCAGTTGGTCCA+AGG | 0.560599 | 2_4:+3803379 | None:intergenic |
| GGACTGGTATACGGGTGACC+TGG | 0.563223 | 2_4:-3803548 | Msa0309350:CDS |
| AGTGGAAGATGCTAAAGGGA+AGG | 0.564506 | 2_4:-3804783 | Msa0309350:CDS |
| TAGCTGAGGTTGTTAGCCGA+TGG | 0.570098 | 2_4:-3803569 | Msa0309350:CDS |
| GCTTGTCTTATCTCTGGAGG+AGG | 0.572681 | 2_4:-3803733 | Msa0309350:CDS |
| AGGTTGCACAATATAGTTGT+GGG | 0.576981 | 2_4:-3803483 | Msa0309350:CDS |
| TGGTCGAGATTTGGTTGAAG+AGG | 0.577488 | 2_4:-3805071 | Msa0309350:CDS |
| AAGTCCACTTATGAGATGCT+CGG | 0.578688 | 2_4:+3802772 | None:intergenic |
| AGTTGATGAGGCTTGTGCAA+GGG | 0.584296 | 2_4:-3804305 | Msa0309350:CDS |
| TCAATTTGATAGTCAGCCAA+AGG | 0.587091 | 2_4:-3805443 | Msa0309350:CDS |
| TATTCCTATCCACTCAGCAC+CGG | 0.587977 | 2_4:+3804838 | None:intergenic |
| GCTGTAGTGAGATCTATAGC+TGG | 0.588552 | 2_4:-3803441 | Msa0309350:CDS |
| GAGATTTGGTTGAAGAGGCA+GGG | 0.590390 | 2_4:-3805066 | Msa0309350:CDS |
| AGGTAGTGTCAAAGCTGGCT+AGG | 0.590683 | 2_4:-3802319 | Msa0309350:CDS |
| TCCAGCAGAGTCAACAATTG+TGG | 0.593158 | 2_4:+3802683 | None:intergenic |
| GATGCTGGTCAGAATGGAAG+TGG | 0.593159 | 2_4:-3802251 | Msa0309350:CDS |
| TTTATCGCGAGCAACTTCCA+TGG | 0.593540 | 2_4:+3802736 | None:intergenic |
| AGAGGATTGATGAGATTCGA+AGG | 0.595177 | 2_4:-3803776 | Msa0309350:CDS |
| GAACAAGGTAGTGTCAAAGC+TGG | 0.596334 | 2_4:-3802324 | Msa0309350:CDS |
| ATTTGATGATGAAAATCAGT+TGG | 0.596906 | 2_4:-3803322 | Msa0309350:CDS |
| ATATGGTGCAATTGATAAGG+TGG | 0.598747 | 2_4:-3803670 | Msa0309350:CDS |
| CCATACTTACATTTGCAAGA+CGG | 0.598863 | 2_4:+3805362 | None:intergenic |
| TGGTCAGAATGGAAGTGGTT+TGG | 0.600627 | 2_4:-3802246 | Msa0309350:CDS |
| TTGATAGTCAGCCAAAGGAA+AGG | 0.601324 | 2_4:-3805438 | Msa0309350:CDS |
| TTGAAACCTATGTTTGATCG+AGG | 0.604726 | 2_4:-3804710 | Msa0309350:CDS |
| TAGTTGATGAGGCTTGTGCA+AGG | 0.606110 | 2_4:-3804306 | Msa0309350:CDS |
| AGGATACAGCACTTGAAAGG+AGG | 0.606188 | 2_4:-3804631 | Msa0309350:CDS |
| GAGAAATATGAGGTTCGTCA+TGG | 0.606189 | 2_4:-3804542 | Msa0309350:CDS |
| TGTTAGGTATGTTGGACATG+AGG | 0.606750 | 2_4:-3802987 | Msa0309350:intron |
| TAACTGAAGCTGTAAGGAGA+AGG | 0.608653 | 2_4:-3802952 | Msa0309350:CDS |
| AACTTAACTTCAGCAAGACA+AGG | 0.610443 | 2_4:+3804890 | None:intergenic |
| TTAAAGTTGTGTGTGACAGG+TGG | 0.614168 | 2_4:-3802036 | Msa0309350:three_prime_UTR |
| AAAAGGATACAGCACTTGAA+AGG | 0.614212 | 2_4:-3804634 | Msa0309350:CDS |
| CATTAGTTTCCGGTGCTGAG+TGG | 0.616510 | 2_4:-3804847 | Msa0309350:CDS |
| ATGCTCGGATCCAAGGTTTG+AGG | 0.618309 | 2_4:+3802787 | None:intergenic |
| CGGCTGCAACAACAATTGAA+CGG | 0.618525 | 2_4:+3804504 | None:intergenic |
| TTGGCTCAGATGATAGGTAA+GGG | 0.619613 | 2_4:-3804920 | Msa0309350:CDS |
| GGATAGGAATACTTATAGGG+AGG | 0.621133 | 2_4:-3804826 | Msa0309350:CDS |
| CTAATAGTATCAGACACACT+AGG | 0.627045 | 2_4:+3804584 | None:intergenic |
| CTCTGGAGGAGGCTGACAGT+CGG | 0.627164 | 2_4:-3803722 | Msa0309350:CDS |
| TGGACTACAAGAGAAATATG+AGG | 0.627910 | 2_4:-3804552 | Msa0309350:CDS |
| TTGAAGTCTTAAATTATGGG+AGG | 0.628820 | 2_4:-3802865 | Msa0309350:CDS |
| CAGGTTGCACAATATAGTTG+TGG | 0.632246 | 2_4:-3803484 | Msa0309350:CDS |
| CGGTAAAACAAAACTTGCTG+AGG | 0.633195 | 2_4:-3803361 | Msa0309350:CDS |
| TATCAATTGCACCATATCGT+AGG | 0.635478 | 2_4:+3803676 | None:intergenic |
| AGGTAAAAGATGAATCCTGC+TGG | 0.635506 | 2_4:-3805475 | Msa0309350:exon |
| AATTATGGGAGGCTAACTGA+TGG | 0.637108 | 2_4:-3802854 | Msa0309350:CDS |
| GCTTGAATGTAGCACTGATG+GGG | 0.639385 | 2_4:-3803631 | Msa0309350:CDS |
| AAGGAACCAATTGGATATCG+AGG | 0.641742 | 2_4:+3803408 | None:intergenic |
| TCAACTTCATAGTCAGCCAG+AGG | 0.642623 | 2_4:-3804275 | Msa0309350:CDS |
| AGAGCTTGTCTTATCTCTGG+AGG | 0.644174 | 2_4:-3803736 | Msa0309350:CDS |
| AGTTGGTCCAAGGAATAGGA+AGG | 0.649213 | 2_4:+3803389 | None:intergenic |
| AGGGCGTCATCTTCCTGACA+AGG | 0.655997 | 2_4:-3804338 | Msa0309350:CDS |
| TTGATGTTGACAGACTCTGT+CGG | 0.656139 | 2_4:-3803603 | Msa0309350:CDS |
| GGGAGGCTAACTGATGGACA+AGG | 0.656241 | 2_4:-3802848 | Msa0309350:CDS |
| AGAAATTGATGAGAATACAA+CGG | 0.667738 | 2_4:-3802282 | Msa0309350:CDS |
| GTTGGTGACTATGTACATGT+CGG | 0.670077 | 2_4:-3803304 | Msa0309350:CDS |
| TATGTACTGACTAGACAACT+CGG | 0.687782 | 2_4:+3804484 | None:intergenic |
| GATTGATTGGTGCTGCACCA+GGG | 0.689462 | 2_4:-3803254 | Msa0309350:intron |
| AGGTATGTTGGACATGAGGA+CGG | 0.689751 | 2_4:-3802983 | Msa0309350:CDS |
| CGGACCAAACCAAATAGCTG+AGG | 0.694161 | 2_4:-3803583 | Msa0309350:CDS |
| TGATGGACAAGGCAGAACTG+TGG | 0.696859 | 2_4:-3802837 | Msa0309350:CDS |
| TCACCCGTATACCAGTCCAT+CGG | 0.708490 | 2_4:+3803553 | None:intergenic |
| ACTTTCAGGAAAATGTACCA+TGG | 0.708787 | 2_4:-3802753 | Msa0309350:CDS |
| TATGTTGGACATGAGGACGG+TGG | 0.731698 | 2_4:-3802980 | Msa0309350:CDS |
| AGATTGTTAATGCTGAAACG+GGG | 0.756258 | 2_4:-3802199 | Msa0309350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTCTTTTTTTTTTTTTTTA+AGG | - | chr2_4:3802051-3802070 | Msa0309350:three_prime_UTR | 10.0% |
| !! | AAAAAACCTAAATATTAATT+CGG | + | chr2_4:3802279-3802298 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTAATGTTGT+AGG | - | chr2_4:3802379-3802398 | Msa0309350:intron | 10.0% |
| !! | AATAAGATATTATAAACTTA+AGG | + | chr2_4:3803882-3803901 | None:intergenic | 10.0% |
| !!! | TTATAGTTGATATTATTTAT+AGG | - | chr2_4:3804006-3804025 | Msa0309350:intron | 10.0% |
| !!! | GTTTTTGTTTTAACAATTTT+AGG | - | chr2_4:3802542-3802561 | Msa0309350:CDS | 15.0% |
| !!! | TCTTTTATATTAACTATTTG+TGG | - | chr2_4:3803456-3803475 | Msa0309350:CDS | 15.0% |
| !!! | TTTATTTATTTTGAGTTAGT+TGG | - | chr2_4:3803976-3803995 | Msa0309350:intron | 15.0% |
| !! | TAAAAGCTTAAATTAATACT+TGG | - | chr2_4:3804678-3804697 | Msa0309350:CDS | 15.0% |
| !!! | TTATATTTTTGTTGTATTGT+AGG | - | chr2_4:3805493-3805512 | Msa0309350:intron | 15.0% |
| !!! | TCTTTTGAAATCAAAATCAA+AGG | - | chr2_4:3802020-3802039 | Msa0309350:three_prime_UTR | 20.0% |
| !! | TTCCTTAAAAAAATCTGAAT+AGG | - | chr2_4:3802191-3802210 | Msa0309350:exon | 20.0% |
| !! | TCCTTAAAAAAATCTGAATA+GGG | - | chr2_4:3802192-3802211 | Msa0309350:exon | 20.0% |
| !!! | ACTTAACTATCTTTGTTTTA+AGG | + | chr2_4:3802246-3802265 | None:intergenic | 20.0% |
| !! | TAAAACAAAGATAGTTAAGT+AGG | - | chr2_4:3802246-3802265 | Msa0309350:CDS | 20.0% |
| !! | AAAACAAAGATAGTTAAGTA+GGG | - | chr2_4:3802247-3802266 | Msa0309350:CDS | 20.0% |
| !!! | TTTTCACCGAATTAATATTT+AGG | - | chr2_4:3802270-3802289 | Msa0309350:CDS | 20.0% |
| !! | AACTGTTGATATTTATTTGT+AGG | - | chr2_4:3802641-3802660 | Msa0309350:CDS | 20.0% |
| !! | AGTAACAATATTGTTCTTAT+AGG | - | chr2_4:3802894-3802913 | Msa0309350:CDS | 20.0% |
| !!! | TTGTAACTTTTATTTCACAT+GGG | + | chr2_4:3804727-3804746 | None:intergenic | 20.0% |
| !!! | TTTGTAACTTTTATTTCACA+TGG | + | chr2_4:3804728-3804747 | None:intergenic | 20.0% |
| !! | TATATATAAGATACACTTAC+AGG | + | chr2_4:3805371-3805390 | None:intergenic | 20.0% |
| !! | TTTCTTATAGAATAATGCTT+TGG | - | chr2_4:3805404-3805423 | Msa0309350:CDS | 20.0% |
| !! | ATTCAAACATGTTATCTTTA+GGG | + | chr2_4:3805778-3805797 | None:intergenic | 20.0% |
| !! | TATTCAAACATGTTATCTTT+AGG | + | chr2_4:3805779-3805798 | None:intergenic | 20.0% |
| !!! | ACCCTATTCAGATTTTTTTA+AGG | + | chr2_4:3802196-3802215 | None:intergenic | 25.0% |
| !!! | TTCCATGTTTTTAGTAAAGT+AGG | - | chr2_4:3802216-3802235 | Msa0309350:CDS | 25.0% |
| !!! | TCCATGTTTTTAGTAAAGTA+GGG | - | chr2_4:3802217-3802236 | Msa0309350:CDS | 25.0% |
| ! | CTAATCTATACTATGAAGAA+AGG | + | chr2_4:3802578-3802597 | None:intergenic | 25.0% |
| ! | TTGATATTTATTTGTAGGTG+CGG | - | chr2_4:3802646-3802665 | Msa0309350:CDS | 25.0% |
| ! | ACGTGATGAAGAAATAATTA+AGG | - | chr2_4:3802851-3802870 | Msa0309350:CDS | 25.0% |
| ! | TGAAGTTAAGTTAATTGCTT+TGG | - | chr2_4:3802995-3803014 | Msa0309350:intron | 25.0% |
| ! | ACATATTTCCTATATTCATC+AGG | + | chr2_4:3803218-3803237 | None:intergenic | 25.0% |
| ! | TGATGAATATAGGAAATATG+TGG | - | chr2_4:3803217-3803236 | Msa0309350:intron | 25.0% |
| ! | ATATAGGAAATATGTGGAAA+AGG | - | chr2_4:3803223-3803242 | Msa0309350:intron | 25.0% |
| ! | TTAACTATTTGTGGATGTAT+TGG | - | chr2_4:3803465-3803484 | Msa0309350:CDS | 25.0% |
| !!! | TTTGTGTTTTTTGTTTGTCA+AGG | - | chr2_4:3803516-3803535 | Msa0309350:CDS | 25.0% |
| !!! | TTGTGTTTTTTGTTTGTCAA+GGG | - | chr2_4:3803517-3803536 | Msa0309350:CDS | 25.0% |
| !! | AACTTTATTCTTTGGAGAAA+AGG | - | chr2_4:3803664-3803683 | Msa0309350:CDS | 25.0% |
| !! | ACTTTATTCTTTGGAGAAAA+GGG | - | chr2_4:3803665-3803684 | Msa0309350:CDS | 25.0% |
| ! | GATGACAAATTTGAATTAAG+AGG | + | chr2_4:3803760-3803779 | None:intergenic | 25.0% |
| !!! | TTTATTTTGAGTTAGTTGGA+AGG | - | chr2_4:3803980-3803999 | Msa0309350:intron | 25.0% |
| ! | GTTGATATTATTTATAGGTG+CGG | - | chr2_4:3804011-3804030 | Msa0309350:intron | 25.0% |
| !! | TCAACCTTTCTTTATCATTT+TGG | + | chr2_4:3804357-3804376 | None:intergenic | 25.0% |
| !! | AATGATAAAGAAAGGTTGAT+TGG | - | chr2_4:3804358-3804377 | Msa0309350:intron | 25.0% |
| !!! | ATTTGATGATGAAAATCAGT+TGG | - | chr2_4:3804552-3804571 | Msa0309350:CDS | 25.0% |
| ! | TCATTGTGAATTGAATTGTT+AGG | - | chr2_4:3804871-3804890 | Msa0309350:CDS | 25.0% |
| ! | AATTGAATTGTTAGGTATGT+TGG | - | chr2_4:3804879-3804898 | Msa0309350:CDS | 25.0% |
| ! | TGCTTGAAGTCTTAAATTAT+GGG | - | chr2_4:3805006-3805025 | Msa0309350:CDS | 25.0% |
| ! | AGAAATTGATGAGAATACAA+CGG | - | chr2_4:3805592-3805611 | Msa0309350:intron | 25.0% |
| !! | TCTCTTCATTATTTTCTACA+CGG | + | chr2_4:3805658-3805677 | None:intergenic | 25.0% |
| !!! | ATTTTGATGCAGATAACAAA+TGG | - | chr2_4:3805709-3805728 | Msa0309350:intron | 25.0% |
| !! | CATAAAACTGAGTATTGACA+CGG | - | chr2_4:3802149-3802168 | Msa0309350:three_prime_UTR | 30.0% |
| !! | ATAAAACTGAGTATTGACAC+GGG | - | chr2_4:3802150-3802169 | Msa0309350:three_prime_UTR | 30.0% |
| ACCCTACTTTACTAAAAACA+TGG | + | chr2_4:3802221-3802240 | None:intergenic | 30.0% | |
| ATATGATTATCTCGTCATGT+TGG | - | chr2_4:3802337-3802356 | Msa0309350:CDS | 30.0% | |
| AGAGTGAAACTTCTTTCTTT+GGG | - | chr2_4:3802462-3802481 | Msa0309350:intron | 30.0% | |
| !! | GTGTATATGTGTTATTTCGA+TGG | - | chr2_4:3802614-3802633 | Msa0309350:CDS | 30.0% |
| TACAAAAAGATGTGTGCAAA+AGG | - | chr2_4:3802735-3802754 | Msa0309350:CDS | 30.0% | |
| TATTGTTCTTATAGGTGAGA+CGG | - | chr2_4:3802902-3802921 | Msa0309350:CDS | 30.0% | |
| GTAAAACAGCTGTTGTTAAA+GGG | - | chr2_4:3802931-3802950 | Msa0309350:CDS | 30.0% | |
| AGTGGATAGGAATACTTATA+GGG | - | chr2_4:3803045-3803064 | Msa0309350:intron | 30.0% | |
| AAACAACACCTGATGAATAT+AGG | - | chr2_4:3803207-3803226 | Msa0309350:intron | 30.0% | |
| GATACTATTAGTATACTTCG+TGG | - | chr2_4:3803302-3803321 | Msa0309350:CDS | 30.0% | |
| ! | AGAAGTGCAACTTTATTCTT+TGG | - | chr2_4:3803656-3803675 | Msa0309350:CDS | 30.0% |
| AATTTGAATTAAGAGGTCGT+TGG | + | chr2_4:3803753-3803772 | None:intergenic | 30.0% | |
| AGTTTAGTAAAGAGAAAGAG+AGG | - | chr2_4:3804080-3804099 | Msa0309350:intron | 30.0% | |
| TTGGCCAAAATGATAAAGAA+AGG | - | chr2_4:3804350-3804369 | Msa0309350:intron | 30.0% | |
| AGATTAAACACACAAGTGTT+TGG | - | chr2_4:3804701-3804720 | Msa0309350:CDS | 30.0% | |
| ! | AAATGTCGACGTTTGAATTT+TGG | - | chr2_4:3804767-3804786 | Msa0309350:CDS | 30.0% |
| ACTATAGTCTACACTAGAAT+TGG | + | chr2_4:3804821-3804840 | None:intergenic | 30.0% | |
| CTGCTTGAAGTCTTAAATTA+TGG | - | chr2_4:3805005-3805024 | Msa0309350:CDS | 30.0% | |
| TTGAAGTCTTAAATTATGGG+AGG | - | chr2_4:3805009-3805028 | Msa0309350:CDS | 30.0% | |
| ! | TTTGTTGTATTGTAGGAGTA+TGG | - | chr2_4:3805500-3805519 | Msa0309350:intron | 30.0% |
| !!! | TTCTCAATCCACTTTTTAGT+TGG | + | chr2_4:3805533-3805552 | None:intergenic | 30.0% |
| !! | TAAAAAGTGGATTGAGAACA+AGG | - | chr2_4:3805535-3805554 | Msa0309350:intron | 30.0% |
| AGAGATTGTTAATGCTGAAA+CGG | - | chr2_4:3805673-3805692 | Msa0309350:intron | 30.0% | |
| ! | TCAATTTGATAGTCAGCCAA+AGG | - | chr2_4:3802431-3802450 | Msa0309350:intron | 35.0% |
| GAGAGTGAAACTTCTTTCTT+TGG | - | chr2_4:3802461-3802480 | Msa0309350:intron | 35.0% | |
| GAGTGAAACTTCTTTCTTTG+GGG | - | chr2_4:3802463-3802482 | Msa0309350:intron | 35.0% | |
| CATACTTACATTTGCAAGAC+GGG | + | chr2_4:3802514-3802533 | None:intergenic | 35.0% | |
| CCATACTTACATTTGCAAGA+CGG | + | chr2_4:3802515-3802534 | None:intergenic | 35.0% | |
| AGCTTCTAAATGTGTGCAAA+AGG | - | chr2_4:3802694-3802713 | Msa0309350:CDS | 35.0% | |
| !! | CGCAAAGCTTTGGAAATTTA+TGG | - | chr2_4:3802783-3802802 | Msa0309350:CDS | 35.0% |
| GGAAATTTATGGTCGAGATT+TGG | - | chr2_4:3802794-3802813 | Msa0309350:CDS | 35.0% | |
| ATTGTTCTTATAGGTGAGAC+GGG | - | chr2_4:3802903-3802922 | Msa0309350:CDS | 35.0% | |
| GGTAAAACAGCTGTTGTTAA+AGG | - | chr2_4:3802930-3802949 | Msa0309350:CDS | 35.0% | |
| AACTTAACTTCAGCAAGACA+AGG | + | chr2_4:3802987-3803006 | None:intergenic | 35.0% | |
| GAGTGGATAGGAATACTTAT+AGG | - | chr2_4:3803044-3803063 | Msa0309350:intron | 35.0% | |
| AAAGAAGTGGAAGATGCTAA+AGG | - | chr2_4:3803086-3803105 | Msa0309350:intron | 35.0% | |
| AAGAAGTGGAAGATGCTAAA+GGG | - | chr2_4:3803087-3803106 | Msa0309350:intron | 35.0% | |
| TTGAAACCTATGTTTGATCG+AGG | - | chr2_4:3803164-3803183 | Msa0309350:intron | 35.0% | |
| ATTTCACCTCGATCAAACAT+AGG | + | chr2_4:3803173-3803192 | None:intergenic | 35.0% | |
| AAAAGGATACAGCACTTGAA+AGG | - | chr2_4:3803240-3803259 | Msa0309350:intron | 35.0% | |
| CTAATAGTATCAGACACACT+AGG | + | chr2_4:3803293-3803312 | None:intergenic | 35.0% | |
| TGGACTACAAGAGAAATATG+AGG | - | chr2_4:3803322-3803341 | Msa0309350:CDS | 35.0% | |
| !! | TATGTACTGACTAGACAACT+CGG | + | chr2_4:3803393-3803412 | None:intergenic | 35.0% |
| TTGTCTAGTCAGTACATATC+TGG | - | chr2_4:3803395-3803414 | Msa0309350:CDS | 35.0% | |
| ATTTGTGGATGTATTGGATG+TGG | - | chr2_4:3803471-3803490 | Msa0309350:CDS | 35.0% | |
| ACTAAATCAATTGCCTTGTC+AGG | + | chr2_4:3803552-3803571 | None:intergenic | 35.0% | |
| ! | GGCAATTGATTTAGTTGATG+AGG | - | chr2_4:3803557-3803576 | Msa0309350:CDS | 35.0% |
| ATTGTGCTTCTGCAATTGTA+AGG | - | chr2_4:3803902-3803921 | Msa0309350:intron | 35.0% | |
| TATCAATTGCACCATATCGT+AGG | + | chr2_4:3804201-3804220 | None:intergenic | 35.0% | |
| ACGATATGGTGCAATTGATA+AGG | - | chr2_4:3804201-3804220 | Msa0309350:CDS | 35.0% | |
| ATATGGTGCAATTGATAAGG+TGG | - | chr2_4:3804204-3804223 | Msa0309350:CDS | 35.0% | |
| ! | AAAGAAAGGTTGATTGGACT+TGG | - | chr2_4:3804364-3804383 | Msa0309350:intron | 35.0% |
| AGGTTGCACAATATAGTTGT+GGG | - | chr2_4:3804391-3804410 | Msa0309350:intron | 35.0% | |
| TCACTACAGCATTTATTGCT+TGG | + | chr2_4:3804423-3804442 | None:intergenic | 35.0% | |
| !! | TCAAAAAGTATCACACTGTG+TGG | + | chr2_4:3804948-3804967 | None:intergenic | 35.0% |
| !! | TGTGATACTTTTTGAGCAAG+TGG | - | chr2_4:3804953-3804972 | Msa0309350:CDS | 35.0% |
| ATTATCATGACCTCAAACCT+TGG | - | chr2_4:3805077-3805096 | Msa0309350:CDS | 35.0% | |
| ACTTTCAGGAAAATGTACCA+TGG | - | chr2_4:3805121-3805140 | Msa0309350:CDS | 35.0% | |
| GAGATTGTTAATGCTGAAAC+GGG | - | chr2_4:3805674-3805693 | Msa0309350:intron | 35.0% | |
| AGATTGTTAATGCTGAAACG+GGG | - | chr2_4:3805675-3805694 | Msa0309350:intron | 35.0% | |
| TTAAAACATCGTCAGCTTTC+TGG | + | chr2_4:3805736-3805755 | None:intergenic | 35.0% | |
| !! | CATGTTATCTTTAGGGTGTT+TGG | + | chr2_4:3805771-3805790 | None:intergenic | 35.0% |
| TTGTTAAAGTTGTGTGTGAC+AGG | - | chr2_4:3805835-3805854 | Msa0309350:intron | 35.0% | |
| AGGTAAAAGATGAATCCTGC+TGG | - | chr2_4:3802399-3802418 | Msa0309350:intron | 40.0% | |
| AATTGAACTCTAACACCAGC+AGG | + | chr2_4:3802417-3802436 | None:intergenic | 40.0% | |
| ! | TTGATAGTCAGCCAAAGGAA+AGG | - | chr2_4:3802436-3802455 | Msa0309350:intron | 40.0% |
| TTCACTCTCTTCCTTTCCTT+TGG | + | chr2_4:3802450-3802469 | None:intergenic | 40.0% | |
| CCGTCTTGCAAATGTAAGTA+TGG | - | chr2_4:3802512-3802531 | Msa0309350:intron | 40.0% | |
| ATGTGACAAAAACGTGAAGC+AGG | - | chr2_4:3802758-3802777 | Msa0309350:CDS | 40.0% | |
| AACAGCTGTTGTTAAAGGGT+TGG | - | chr2_4:3802935-3802954 | Msa0309350:CDS | 40.0% | |
| TTGGCTCAGATGATAGGTAA+GGG | - | chr2_4:3802954-3802973 | Msa0309350:CDS | 40.0% | |
| !! | GATACGAGAGCATTAGTTTC+CGG | - | chr2_4:3803017-3803036 | Msa0309350:intron | 40.0% |
| GGATAGGAATACTTATAGGG+AGG | - | chr2_4:3803048-3803067 | Msa0309350:intron | 40.0% | |
| !!! | GAACGCTGTTTTGAAAGAAG+TGG | - | chr2_4:3803073-3803092 | Msa0309350:intron | 40.0% |
| CGAGGTGAAATTAGATGCAT+CGG | - | chr2_4:3803182-3803201 | Msa0309350:intron | 40.0% | |
| ACTTGAAAGGAGGTTTCAAC+AGG | - | chr2_4:3803253-3803272 | Msa0309350:intron | 40.0% | |
| GAGAAATATGAGGTTCGTCA+TGG | - | chr2_4:3803332-3803351 | Msa0309350:CDS | 40.0% | |
| ! | GTATTGGATGTGGATGGTTT+TGG | - | chr2_4:3803481-3803500 | Msa0309350:CDS | 40.0% |
| TTGAGGATAGCAATTTCCTC+TGG | + | chr2_4:3803618-3803637 | None:intergenic | 40.0% | |
| AGGAAATTGCTATCCTCAAC+AGG | - | chr2_4:3803619-3803638 | Msa0309350:CDS | 40.0% | |
| CTTCTGCAATTGTAAGGTAG+TGG | - | chr2_4:3803908-3803927 | Msa0309350:intron | 40.0% | |
| CGGAAAGAACTTGACAACTT+AGG | - | chr2_4:3804031-3804050 | Msa0309350:intron | 40.0% | |
| AGAGGATTGATGAGATTCGA+AGG | - | chr2_4:3804098-3804117 | Msa0309350:intron | 40.0% | |
| TGAAGAGCTTGTCTTATCTC+TGG | - | chr2_4:3804135-3804154 | Msa0309350:intron | 40.0% | |
| AGAGATTCAGACCTACGATA+TGG | - | chr2_4:3804187-3804206 | Msa0309350:CDS | 40.0% | |
| !! | AGCTTGAATGTAGCACTGAT+GGG | - | chr2_4:3804242-3804261 | Msa0309350:CDS | 40.0% |
| TTGATGTTGACAGACTCTGT+CGG | - | chr2_4:3804271-3804290 | Msa0309350:CDS | 40.0% | |
| ACAACCTCAGCTATTTGGTT+TGG | + | chr2_4:3804298-3804317 | None:intergenic | 40.0% | |
| !! | TTTATCATTTTGGCCAAGCC+AGG | + | chr2_4:3804347-3804366 | None:intergenic | 40.0% |
| CAGGTTGCACAATATAGTTG+TGG | - | chr2_4:3804390-3804409 | Msa0309350:intron | 40.0% | |
| !! | GTGAGATCTATAGCTGGTTT+TGG | - | chr2_4:3804439-3804458 | Msa0309350:intron | 40.0% |
| AAGGAACCAATTGGATATCG+AGG | + | chr2_4:3804469-3804488 | None:intergenic | 40.0% | |
| AGGAATAGGAAGGAACCAAT+TGG | + | chr2_4:3804478-3804497 | None:intergenic | 40.0% | |
| ! | ATTGGTTCCTTCCTATTCCT+TGG | - | chr2_4:3804478-3804497 | Msa0309350:intron | 40.0% |
| !!! | TTTGTTTTACCGACACCAGT+TGG | + | chr2_4:3804505-3804524 | None:intergenic | 40.0% |
| !! | CGGTAAAACAAAACTTGCTG+AGG | - | chr2_4:3804513-3804532 | Msa0309350:CDS | 40.0% |
| !! | GTTGGTGACTATGTACATGT+CGG | - | chr2_4:3804570-3804589 | Msa0309350:CDS | 40.0% |
| TATGTACATGTCGGACTACT+GGG | - | chr2_4:3804579-3804598 | Msa0309350:CDS | 40.0% | |
| CACTCTGTGTCAAGATTGAT+TGG | - | chr2_4:3804607-3804626 | Msa0309350:CDS | 40.0% | |
| GCTAACCTAATAACTTACCC+TGG | + | chr2_4:3804640-3804659 | None:intergenic | 40.0% | |
| TGTTAGGTATGTTGGACATG+AGG | - | chr2_4:3804887-3804906 | Msa0309350:CDS | 40.0% | |
| GACGATTAACTGAAGCTGTA+AGG | - | chr2_4:3804916-3804935 | Msa0309350:CDS | 40.0% | |
| TAACTGAAGCTGTAAGGAGA+AGG | - | chr2_4:3804922-3804941 | Msa0309350:CDS | 40.0% | |
| AATTATGGGAGGCTAACTGA+TGG | - | chr2_4:3805020-3805039 | Msa0309350:CDS | 40.0% | |
| ! | AAGGCAGAACTGTGGATTTT+AGG | - | chr2_4:3805045-3805064 | Msa0309350:CDS | 40.0% |
| AAGTCCACTTATGAGATGCT+CGG | + | chr2_4:3805105-3805124 | None:intergenic | 40.0% | |
| ! | CATCTCATAAGTGGACTTTC+AGG | - | chr2_4:3805107-3805126 | Msa0309350:CDS | 40.0% |
| !! | AGGAAGTGAGAAAGCATTTC+AGG | - | chr2_4:3805168-3805187 | Msa0309350:CDS | 40.0% |
| AACCTTGCAAACTTCCTCAA+TGG | + | chr2_4:3805251-3805270 | None:intergenic | 40.0% | |
| GTTTGCAAGGTTGCATATGA+AGG | - | chr2_4:3805259-3805278 | Msa0309350:intron | 40.0% | |
| ! | GCTAATCGTTTTGCTGAGAA+AGG | - | chr2_4:3805287-3805306 | Msa0309350:intron | 40.0% |
| GTGCTAGACCAACTAAAAAG+TGG | - | chr2_4:3805522-3805541 | Msa0309350:intron | 40.0% | |
| TTAAAGTTGTGTGTGACAGG+TGG | - | chr2_4:3805838-3805857 | Msa0309350:intron | 40.0% | |
| ! | ACACGGGCTATTAGTTAAGC+AGG | - | chr2_4:3802166-3802185 | Msa0309350:three_prime_UTR | 45.0% |
| ! | CACGGGCTATTAGTTAAGCA+GGG | - | chr2_4:3802167-3802186 | Msa0309350:three_prime_UTR | 45.0% |
| ! | TGGTCGAGATTTGGTTGAAG+AGG | - | chr2_4:3802803-3802822 | Msa0309350:CDS | 45.0% |
| ! | GAGATTTGGTTGAAGAGGCA+GGG | - | chr2_4:3802808-3802827 | Msa0309350:CDS | 45.0% |
| GGGAAACTTGATCCTGTTGT+CGG | - | chr2_4:3802828-3802847 | Msa0309350:CDS | 45.0% | |
| !! | AAAGGGTTGGCTCAGATGAT+AGG | - | chr2_4:3802948-3802967 | Msa0309350:CDS | 45.0% |
| ! | GTTGGCTCAGATGATAGGTA+AGG | - | chr2_4:3802953-3802972 | Msa0309350:CDS | 45.0% |
| TATTCCTATCCACTCAGCAC+CGG | + | chr2_4:3803039-3803058 | None:intergenic | 45.0% | |
| AGTGGAAGATGCTAAAGGGA+AGG | - | chr2_4:3803091-3803110 | Msa0309350:intron | 45.0% | |
| AGGATACAGCACTTGAAAGG+AGG | - | chr2_4:3803243-3803262 | Msa0309350:intron | 45.0% | |
| CGGCTGCAACAACAATTGAA+CGG | + | chr2_4:3803373-3803392 | None:intergenic | 45.0% | |
| GTGGATGTATTGGATGTGGA+TGG | - | chr2_4:3803475-3803494 | Msa0309350:CDS | 45.0% | |
| !! | TAGTTGATGAGGCTTGTGCA+AGG | - | chr2_4:3803568-3803587 | Msa0309350:CDS | 45.0% |
| !! | AGTTGATGAGGCTTGTGCAA+GGG | - | chr2_4:3803569-3803588 | Msa0309350:CDS | 45.0% |
| TCAACTTCATAGTCAGCCAG+AGG | - | chr2_4:3803599-3803618 | Msa0309350:CDS | 45.0% | |
| GTTGCATTCTCTTCCTGTTG+AGG | + | chr2_4:3803635-3803654 | None:intergenic | 45.0% | |
| TGACAACTTAGGAGACAAGC+TGG | - | chr2_4:3804042-3804061 | Msa0309350:intron | 45.0% | |
| AGAGCTTGTCTTATCTCTGG+AGG | - | chr2_4:3804138-3804157 | Msa0309350:intron | 45.0% | |
| ! | CAGCTTGAATGTAGCACTGA+TGG | - | chr2_4:3804241-3804260 | Msa0309350:CDS | 45.0% |
| !! | GCTTGAATGTAGCACTGATG+GGG | - | chr2_4:3804243-3804262 | Msa0309350:CDS | 45.0% |
| GGCTAACAACCTCAGCTATT+TGG | + | chr2_4:3804303-3804322 | None:intergenic | 45.0% | |
| !! | TTAGCCGATGGACTGGTATA+CGG | - | chr2_4:3804317-3804336 | Msa0309350:CDS | 45.0% |
| GCTGTAGTGAGATCTATAGC+TGG | - | chr2_4:3804433-3804452 | Msa0309350:intron | 45.0% | |
| GGAAGACCTCGATATCCAAT+TGG | - | chr2_4:3804460-3804479 | Msa0309350:intron | 45.0% | |
| AGTTGGTCCAAGGAATAGGA+AGG | + | chr2_4:3804488-3804507 | None:intergenic | 45.0% | |
| TTCCTATTCCTTGGACCAAC+TGG | - | chr2_4:3804487-3804506 | Msa0309350:CDS | 45.0% | |
| CTATGTACATGTCGGACTAC+TGG | - | chr2_4:3804578-3804597 | Msa0309350:CDS | 45.0% | |
| CTGCACCAGGGTAAGTTATT+AGG | - | chr2_4:3804632-3804651 | Msa0309350:CDS | 45.0% | |
| AGGTATGTTGGACATGAGGA+CGG | - | chr2_4:3804891-3804910 | Msa0309350:CDS | 45.0% | |
| TTATGAGATGCTCGGATCCA+AGG | + | chr2_4:3805097-3805116 | None:intergenic | 45.0% | |
| TTTATCGCGAGCAACTTCCA+TGG | + | chr2_4:3805141-3805160 | None:intergenic | 45.0% | |
| TGCTCGCGATAAAGTAATGC+AGG | - | chr2_4:3805148-3805167 | Msa0309350:CDS | 45.0% | |
| TCCAGCAGAGTCAACAATTG+TGG | + | chr2_4:3805194-3805213 | None:intergenic | 45.0% | |
| AGCCATTGAGGAAGTTTGCA+AGG | - | chr2_4:3805246-3805265 | Msa0309350:intron | 45.0% | |
| GAACAAGGTAGTGTCAAAGC+TGG | - | chr2_4:3805550-3805569 | Msa0309350:intron | 45.0% | |
| AGCTGGCTAGGATGCTTATA+AGG | - | chr2_4:3805567-3805586 | Msa0309350:intron | 45.0% | |
| ACAACGGTTTACGTTGATGC+TGG | - | chr2_4:3805608-3805627 | Msa0309350:intron | 45.0% | |
| TACGTTGATGCTGGTCAGAA+TGG | - | chr2_4:3805617-3805636 | Msa0309350:intron | 45.0% | |
| TGGTCAGAATGGAAGTGGTT+TGG | - | chr2_4:3805628-3805647 | Msa0309350:intron | 45.0% | |
| GAAGCAGGAACGCAAAGCTT+TGG | - | chr2_4:3802773-3802792 | Msa0309350:CDS | 50.0% | |
| ! | CGAGATTTGGTTGAAGAGGC+AGG | - | chr2_4:3802807-3802826 | Msa0309350:CDS | 50.0% |
| TCTTCATCACGTCCGACAAC+AGG | + | chr2_4:3802843-3802862 | None:intergenic | 50.0% | |
| CTTATAGGTGAGACGGGTGT+TGG | - | chr2_4:3802909-3802928 | Msa0309350:CDS | 50.0% | |
| ! | CATTAGTTTCCGGTGCTGAG+TGG | - | chr2_4:3803027-3803046 | Msa0309350:intron | 50.0% |
| ! | GCTTGTCTTATCTCTGGAGG+AGG | - | chr2_4:3804141-3804160 | Msa0309350:intron | 50.0% |
| CGGACCAAACCAAATAGCTG+AGG | - | chr2_4:3804291-3804310 | Msa0309350:CDS | 50.0% | |
| TAGCTGAGGTTGTTAGCCGA+TGG | - | chr2_4:3804305-3804324 | Msa0309350:CDS | 50.0% | |
| !! | TAGCCGATGGACTGGTATAC+GGG | - | chr2_4:3804318-3804337 | Msa0309350:CDS | 50.0% |
| TCACCCGTATACCAGTCCAT+CGG | + | chr2_4:3804324-3804343 | None:intergenic | 50.0% | |
| !! | GGTTGATTGGACTTGGTGAC+AGG | - | chr2_4:3804371-3804390 | Msa0309350:intron | 50.0% |
| CACCAGTTGGTCCAAGGAAT+AGG | + | chr2_4:3804492-3804511 | None:intergenic | 50.0% | |
| TTCCTTGGACCAACTGGTGT+CGG | - | chr2_4:3804493-3804512 | Msa0309350:CDS | 50.0% | |
| !! | AGATTGATTGGTGCTGCACC+AGG | - | chr2_4:3804619-3804638 | Msa0309350:CDS | 50.0% |
| !! | GATTGATTGGTGCTGCACCA+GGG | - | chr2_4:3804620-3804639 | Msa0309350:CDS | 50.0% |
| TATGTTGGACATGAGGACGG+TGG | - | chr2_4:3804894-3804913 | Msa0309350:CDS | 50.0% | |
| ! | TGATGGACAAGGCAGAACTG+TGG | - | chr2_4:3805037-3805056 | Msa0309350:CDS | 50.0% |
| ATGCTCGGATCCAAGGTTTG+AGG | + | chr2_4:3805090-3805109 | None:intergenic | 50.0% | |
| GGATCCGAGCATCTCATAAG+TGG | - | chr2_4:3805098-3805117 | Msa0309350:CDS | 50.0% | |
| !! | GCCACAATTGTTGACTCTGC+TGG | - | chr2_4:3805190-3805209 | Msa0309350:CDS | 50.0% |
| !! | TGCTGAGAAAGGCATCGCTT+TGG | - | chr2_4:3805298-3805317 | Msa0309350:intron | 50.0% |
| !! | TGAGAAAGGCATCGCTTTGG+CGG | - | chr2_4:3805301-3805320 | Msa0309350:intron | 50.0% |
| AGGTAGTGTCAAAGCTGGCT+AGG | - | chr2_4:3805555-3805574 | Msa0309350:intron | 50.0% | |
| GATGCTGGTCAGAATGGAAG+TGG | - | chr2_4:3805623-3805642 | Msa0309350:intron | 50.0% | |
| ATGCTGAAACGGGGTGAAGT+CGG | - | chr2_4:3805684-3805703 | Msa0309350:intron | 50.0% | |
| ! | GTTTCCGGTGCTGAGTGGAT+AGG | - | chr2_4:3803032-3803051 | Msa0309350:intron | 55.0% |
| ! | AGGGCGTCATCTTCCTGACA+AGG | - | chr2_4:3803536-3803555 | Msa0309350:CDS | 55.0% |
| GAGGTTGTTAGCCGATGGAC+TGG | - | chr2_4:3804310-3804329 | Msa0309350:CDS | 55.0% | |
| TACCGACACCAGTTGGTCCA+AGG | + | chr2_4:3804498-3804517 | None:intergenic | 55.0% | |
| ! | GGGAGGCTAACTGATGGACA+AGG | - | chr2_4:3805026-3805045 | Msa0309350:CDS | 55.0% |
| CTCAATGGCTCGCGAGAAAG+AGG | + | chr2_4:3805236-3805255 | None:intergenic | 55.0% | |
| CTCTTTCTCGCGAGCCATTG+AGG | - | chr2_4:3805234-3805253 | Msa0309350:intron | 55.0% | |
| ! | CTCTGGAGGAGGCTGACAGT+CGG | - | chr2_4:3804152-3804171 | Msa0309350:intron | 60.0% |
| ! | GGACTGGTATACGGGTGACC+TGG | - | chr2_4:3804326-3804345 | Msa0309350:CDS | 60.0% |
| GGTATACGGGTGACCTGGCT+TGG | - | chr2_4:3804331-3804350 | Msa0309350:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 3802008 | 3805888 | 3802008 | ID=Msa0309350;Name=Msa0309350 |
| chr2_4 | mRNA | 3802008 | 3805888 | 3802008 | ID=Msa0309350-mRNA-1;Parent=Msa0309350;Name=Msa0309350-mRNA-1;_AED=0.25;_eAED=0.25;_QI=41|1|0.85|1|0.83|0.71|7|188|776 |
| chr2_4 | exon | 3802008 | 3802381 | 3802008 | ID=Msa0309350-mRNA-1:exon:1334;Parent=Msa0309350-mRNA-1 |
| chr2_4 | exon | 3802526 | 3803003 | 3802526 | ID=Msa0309350-mRNA-1:exon:1333;Parent=Msa0309350-mRNA-1 |
| chr2_4 | exon | 3803255 | 3803868 | 3803255 | ID=Msa0309350-mRNA-1:exon:1332;Parent=Msa0309350-mRNA-1 |
| chr2_4 | exon | 3804177 | 3804358 | 3804177 | ID=Msa0309350-mRNA-1:exon:1331;Parent=Msa0309350-mRNA-1 |
| chr2_4 | exon | 3804480 | 3805233 | 3804480 | ID=Msa0309350-mRNA-1:exon:1330;Parent=Msa0309350-mRNA-1 |
| chr2_4 | exon | 3805372 | 3805495 | 3805372 | ID=Msa0309350-mRNA-1:exon:1329;Parent=Msa0309350-mRNA-1 |
| chr2_4 | exon | 3805855 | 3805888 | 3805855 | ID=Msa0309350-mRNA-1:exon:1328;Parent=Msa0309350-mRNA-1 |
| chr2_4 | five_prime_UTR | 3805855 | 3805888 | 3805855 | ID=Msa0309350-mRNA-1:five_prime_utr;Parent=Msa0309350-mRNA-1 |
| chr2_4 | five_prime_UTR | 3805489 | 3805495 | 3805489 | ID=Msa0309350-mRNA-1:five_prime_utr;Parent=Msa0309350-mRNA-1 |
| chr2_4 | CDS | 3805372 | 3805488 | 3805372 | ID=Msa0309350-mRNA-1:cds;Parent=Msa0309350-mRNA-1 |
| chr2_4 | CDS | 3804480 | 3805233 | 3804480 | ID=Msa0309350-mRNA-1:cds;Parent=Msa0309350-mRNA-1 |
| chr2_4 | CDS | 3804177 | 3804358 | 3804177 | ID=Msa0309350-mRNA-1:cds;Parent=Msa0309350-mRNA-1 |
| chr2_4 | CDS | 3803255 | 3803868 | 3803255 | ID=Msa0309350-mRNA-1:cds;Parent=Msa0309350-mRNA-1 |
| chr2_4 | CDS | 3802526 | 3803003 | 3802526 | ID=Msa0309350-mRNA-1:cds;Parent=Msa0309350-mRNA-1 |
| chr2_4 | CDS | 3802196 | 3802381 | 3802196 | ID=Msa0309350-mRNA-1:cds;Parent=Msa0309350-mRNA-1 |
| chr2_4 | three_prime_UTR | 3802008 | 3802195 | 3802008 | ID=Msa0309350-mRNA-1:three_prime_utr;Parent=Msa0309350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
