Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731590 | XP_003615062.1 | 95.652 | 322 | 14 | 0 | 175 | 496 | 355 | 676 | 0.0 | 644 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731590 | sp|Q9MAH1|TTL1_ARATH | 43.119 | 327 | 180 | 3 | 175 | 495 | 372 | 698 | 8.22e-78 | 260 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731590 | G7KAB8 | 95.652 | 322 | 14 | 0 | 175 | 496 | 355 | 676 | 0.0 | 644 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0060670 | Msa0731590 | 0.826905 | 2.098992e-54 | -8.615850e-47 |
| Msa0072180 | Msa0731590 | 0.813069 | 3.084962e-51 | -8.615850e-47 |
| Msa0657710 | Msa0731590 | 0.847594 | 1.047648e-59 | -8.615850e-47 |
| Msa0657720 | Msa0731590 | 0.831346 | 1.758481e-55 | -8.615850e-47 |
| Msa0682110 | Msa0731590 | 0.833534 | 5.048165e-56 | -8.615850e-47 |
| Msa0682160 | Msa0731590 | 0.844058 | 9.564367e-59 | -8.615850e-47 |
| Msa0687580 | Msa0731590 | 0.805165 | 1.522850e-49 | -8.615850e-47 |
| Msa0702790 | Msa0731590 | 0.833077 | 6.561565e-56 | -8.615850e-47 |
| Msa0702800 | Msa0731590 | 0.847666 | 1.001173e-59 | -8.615850e-47 |
| Msa0712880 | Msa0731590 | 0.834998 | 2.166631e-56 | -8.615850e-47 |
| Msa0722890 | Msa0731590 | 0.813303 | 2.740091e-51 | -8.615850e-47 |
| Msa0723090 | Msa0731590 | 0.847366 | 1.210214e-59 | -8.615850e-47 |
| Msa0731590 | Msa0731680 | 0.863032 | 3.324105e-64 | -8.615850e-47 |
| Msa0731590 | Msa0736920 | 0.802444 | 5.593557e-49 | -8.615850e-47 |
| Msa0731590 | Msa0771790 | 0.885118 | 1.070581e-71 | -8.615850e-47 |
| Msa0731590 | Msa0778570 | 0.804330 | 2.275229e-49 | -8.615850e-47 |
| Msa0731590 | Msa0809930 | 0.836253 | 1.042890e-56 | -8.615850e-47 |
| Msa0731590 | Msa0828950 | 0.826035 | 3.382587e-54 | -8.615850e-47 |
| Msa0731590 | Msa0828960 | 0.850540 | 1.589678e-60 | -8.615850e-47 |
| Msa0731590 | Msa0848910 | 0.890629 | 8.285609e-74 | -8.615850e-47 |
| Msa0731590 | Msa0867660 | -0.829032 | 6.458420e-55 | -8.615850e-47 |
| Msa0731590 | Msa0873910 | 0.821343 | 4.245840e-53 | -8.615850e-47 |
| Msa0731590 | Msa0906660 | 0.809277 | 2.048370e-50 | -8.615850e-47 |
| Msa0731590 | Msa0908260 | -0.802228 | 6.197792e-49 | -8.615850e-47 |
| Msa0731590 | Msa0908270 | -0.810604 | 1.061477e-50 | -8.615850e-47 |
| Msa0731590 | Msa0908350 | -0.809786 | 1.593230e-50 | -8.615850e-47 |
| Msa0731590 | Msa0908470 | -0.816385 | 5.684078e-52 | -8.615850e-47 |
| Msa0731590 | Msa0908510 | -0.811638 | 6.333225e-51 | -8.615850e-47 |
| Msa0731590 | Msa0908630 | -0.809092 | 2.245032e-50 | -8.615850e-47 |
| Msa0731590 | Msa0908690 | -0.805300 | 1.426721e-49 | -8.615850e-47 |
| Msa0731590 | Msa0908700 | -0.811219 | 7.810140e-51 | -8.615850e-47 |
| Msa0731590 | Msa0909260 | 0.808959 | 2.397105e-50 | -8.615850e-47 |
| Msa0731590 | Msa0924900 | -0.817300 | 3.541646e-52 | -8.615850e-47 |
| Msa0731590 | Msa0942220 | 0.812871 | 3.408989e-51 | -8.615850e-47 |
| Msa0731590 | Msa0975960 | 0.811399 | 7.140327e-51 | -8.615850e-47 |
| Msa0731590 | Msa0983600 | -0.820763 | 5.777416e-53 | -8.615850e-47 |
| Msa0731590 | Msa0983610 | -0.824891 | 6.313239e-54 | -8.615850e-47 |
| Msa0731590 | Msa1086760 | -0.804124 | 2.511594e-49 | -8.615850e-47 |
| Msa0731590 | Msa1086770 | -0.816578 | 5.143727e-52 | -8.615850e-47 |
| Msa0731590 | Msa1086940 | -0.816554 | 5.207965e-52 | -8.615850e-47 |
| Msa0731590 | Msa1087070 | -0.810876 | 9.268767e-51 | -8.615850e-47 |
| Msa0731590 | Msa1087080 | -0.801982 | 6.962458e-49 | -8.615850e-47 |
| Msa0731590 | Msa1087090 | -0.816643 | 4.975146e-52 | -8.615850e-47 |
| Msa0731590 | Msa1106590 | 0.824107 | 9.655498e-54 | -8.615850e-47 |
| Msa0731590 | Msa1136760 | 0.800230 | 1.588516e-48 | -8.615850e-47 |
| Msa0731590 | Msa1154320 | 0.800874 | 1.174273e-48 | -8.615850e-47 |
| Msa0731590 | Msa1187480 | 0.808605 | 2.853583e-50 | -8.615850e-47 |
| Msa0731590 | Msa1202800 | 0.841565 | 4.399084e-58 | -8.615850e-47 |
| Msa0731590 | Msa1214310 | 0.805324 | 1.410257e-49 | -8.615850e-47 |
| Msa0731590 | Msa1238600 | 0.810613 | 1.056805e-50 | -8.615850e-47 |
| Msa0731590 | Msa1250610 | 0.802140 | 6.461904e-49 | -8.615850e-47 |
| Msa0731590 | Msa1255210 | 0.837959 | 3.820470e-57 | -8.615850e-47 |
| Msa0731590 | Msa1255690 | 0.804245 | 2.369392e-49 | -8.615850e-47 |
| Msa0731590 | Msa1283930 | 0.815783 | 7.746448e-52 | -8.615850e-47 |
| Msa0731590 | Msa1295650 | 0.835730 | 1.415843e-56 | -8.615850e-47 |
| Msa0731590 | Msa1322960 | 0.807517 | 4.862363e-50 | -8.615850e-47 |
| Msa0731590 | Msa1326680 | 0.802284 | 6.035629e-49 | -8.615850e-47 |
| Msa0731590 | Msa1343600 | 0.804525 | 2.071396e-49 | -8.615850e-47 |
| Msa0731590 | Msa1354360 | -0.820683 | 6.026571e-53 | -8.615850e-47 |
| Msa0731590 | Msa1354370 | -0.807696 | 4.455557e-50 | -8.615850e-47 |
| Msa0731590 | Msa1354400 | -0.817585 | 3.055143e-52 | -8.615850e-47 |
| Msa0731590 | Msa1354520 | -0.820727 | 5.886869e-53 | -8.615850e-47 |
| Msa0731590 | Msa1354530 | -0.819467 | 1.143835e-52 | -8.615850e-47 |
| Msa0731590 | Msa1354650 | -0.820930 | 5.287914e-53 | -8.615850e-47 |
| Msa0731590 | Msa1354660 | -0.820565 | 6.413897e-53 | -8.615850e-47 |
| Msa0731590 | Msa1354780 | -0.812460 | 4.192463e-51 | -8.615850e-47 |
| Msa0731590 | Msa1354790 | -0.822587 | 2.186823e-53 | -8.615850e-47 |
| Msa0731590 | Msa1354960 | -0.826991 | 2.002246e-54 | -8.615850e-47 |
| Msa0731590 | Msa1365820 | 0.822620 | 2.148604e-53 | -8.615850e-47 |
| Msa0731590 | Msa1365990 | -0.814566 | 1.443257e-51 | -8.615850e-47 |
| Msa0731590 | Msa1366020 | -0.815789 | 7.719784e-52 | -8.615850e-47 |
| Msa0731590 | Msa1366030 | -0.818639 | 1.765036e-52 | -8.615850e-47 |
| Msa0731590 | Msa1366060 | -0.817281 | 3.576675e-52 | -8.615850e-47 |
| Msa0731590 | Msa1368260 | -0.816468 | 5.444431e-52 | -8.615850e-47 |
| Msa0731590 | Msa1368390 | 0.814267 | 1.680449e-51 | -8.615850e-47 |
| Msa0731590 | Msa1385360 | -0.814334 | 1.624035e-51 | -8.615850e-47 |
| Msa0731590 | Msa1385390 | -0.818061 | 2.385281e-52 | -8.615850e-47 |
| Msa0731590 | Msa1391130 | -0.814642 | 1.388430e-51 | -8.615850e-47 |
| Msa0731590 | Msa1391140 | -0.822976 | 1.775412e-53 | -8.615850e-47 |
| Msa0731590 | Msa1391260 | -0.818360 | 2.041315e-52 | -8.615850e-47 |
| Msa0731590 | Msa1398140 | 0.803931 | 2.754223e-49 | -8.615850e-47 |
| Msa0731590 | Msa1433360 | 0.821709 | 3.495320e-53 | -8.615850e-47 |
| Msa0731590 | Msa1445530 | 0.810260 | 1.259207e-50 | -8.615850e-47 |
| Msa0731590 | Msa1461370 | 0.815069 | 1.116633e-51 | -8.615850e-47 |
| Msa0139680 | Msa0731590 | 0.800368 | 1.489429e-48 | -8.615850e-47 |
| Msa0151660 | Msa0731590 | 0.820545 | 6.482090e-53 | -8.615850e-47 |
| Msa0187540 | Msa0731590 | 0.802756 | 4.823828e-49 | -8.615850e-47 |
| Msa0226310 | Msa0731590 | 0.837291 | 5.667793e-57 | -8.615850e-47 |
| Msa0405460 | Msa0731590 | -0.801226 | 9.949503e-49 | -8.615850e-47 |
| Msa0405470 | Msa0731590 | -0.807477 | 4.959210e-50 | -8.615850e-47 |
| Msa0405550 | Msa0731590 | -0.810668 | 1.027899e-50 | -8.615850e-47 |
| Msa0481630 | Msa0731590 | 0.805461 | 1.320177e-49 | -8.615850e-47 |
| Msa0254260 | Msa0731590 | 0.811612 | 6.418111e-51 | -8.615850e-47 |
| Msa0269170 | Msa0731590 | -0.824812 | 6.588293e-54 | -8.615850e-47 |
| Msa0304570 | Msa0731590 | 0.838171 | 3.368742e-57 | -8.615850e-47 |
| Msa0304680 | Msa0731590 | 0.840734 | 7.272197e-58 | -8.615850e-47 |
| Msa0334630 | Msa0731590 | 0.804066 | 2.582333e-49 | -8.615850e-47 |
| Msa0345050 | Msa0731590 | 0.814952 | 1.185125e-51 | -8.615850e-47 |
| Msa0483970 | Msa0731590 | -0.812246 | 4.668812e-51 | -8.615850e-47 |
| Msa0512630 | Msa0731590 | 0.800718 | 1.263469e-48 | -8.615850e-47 |
| Msa0546590 | Msa0731590 | 0.802094 | 6.603840e-49 | -8.615850e-47 |
| Msa0591250 | Msa0731590 | -0.804648 | 1.953000e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731590 | MtrunA17_Chr5g0425741 | 95.652 | 322 | 14 | 0 | 175 | 496 | 355 | 676 | 0.0 | 644 |
| Msa0731590 | MtrunA17_Chr3g0115681 | 79.814 | 322 | 65 | 0 | 175 | 496 | 335 | 656 | 0.0 | 531 |
| Msa0731590 | MtrunA17_Chr2g0316221 | 45.152 | 330 | 172 | 2 | 175 | 495 | 366 | 695 | 7.21e-87 | 281 |
| Msa0731590 | MtrunA17_Chr3g0124261 | 61.429 | 210 | 81 | 0 | 175 | 384 | 367 | 576 | 1.31e-83 | 269 |
| Msa0731590 | MtrunA17_Chr5g0430691 | 73.571 | 140 | 37 | 0 | 1 | 140 | 1 | 140 | 1.90e-67 | 220 |
| Msa0731590 | MtrunA17_Chr4g0002791 | 77.206 | 136 | 31 | 0 | 1 | 136 | 1 | 136 | 4.35e-65 | 218 |
| Msa0731590 | MtrunA17_Chr8g0359381 | 80.147 | 136 | 27 | 0 | 1 | 136 | 411 | 546 | 4.06e-64 | 224 |
| Msa0731590 | MtrunA17_Chr5g0431011 | 79.412 | 136 | 28 | 0 | 1 | 136 | 63 | 198 | 1.05e-63 | 218 |
| Msa0731590 | MtrunA17_Chr6g0469141 | 69.286 | 140 | 43 | 0 | 1 | 140 | 85 | 224 | 4.52e-61 | 201 |
| Msa0731590 | MtrunA17_Chr3g0085661 | 67.143 | 140 | 46 | 0 | 1 | 140 | 63 | 202 | 2.95e-58 | 200 |
| Msa0731590 | MtrunA17_Chr2g0296731 | 66.429 | 140 | 47 | 0 | 1 | 140 | 1 | 140 | 2.63e-55 | 192 |
| Msa0731590 | MtrunA17_Chr4g0023831 | 63.971 | 136 | 49 | 0 | 1 | 136 | 1180 | 1315 | 1.98e-50 | 186 |
| Msa0731590 | MtrunA17_Chr4g0020731 | 62.143 | 140 | 53 | 0 | 1 | 140 | 292 | 431 | 2.62e-50 | 182 |
| Msa0731590 | MtrunA17_Chr3g0085761 | 59.574 | 141 | 57 | 0 | 1 | 141 | 467 | 607 | 6.62e-48 | 176 |
| Msa0731590 | MtrunA17_Chr6g0452011 | 59.286 | 140 | 57 | 0 | 1 | 140 | 293 | 432 | 1.01e-47 | 171 |
| Msa0731590 | MtrunA17_Chr8g0363541 | 69.474 | 95 | 29 | 0 | 46 | 140 | 1 | 95 | 1.29e-37 | 139 |
| Msa0731590 | MtrunA17_Chr6g0479961 | 64.211 | 95 | 34 | 0 | 46 | 140 | 1 | 95 | 5.16e-37 | 132 |
| Msa0731590 | MtrunA17_Chr3g0131371 | 76.471 | 85 | 20 | 0 | 56 | 140 | 1 | 85 | 6.68e-37 | 142 |
| Msa0731590 | MtrunA17_Chr6g0488181 | 65.657 | 99 | 33 | 1 | 46 | 144 | 1 | 98 | 1.07e-34 | 129 |
| Msa0731590 | MtrunA17_Chr5g0411291 | 44.853 | 136 | 74 | 1 | 1 | 136 | 217 | 351 | 5.55e-31 | 127 |
| Msa0731590 | MtrunA17_Chr4g0031641 | 71.622 | 74 | 21 | 0 | 67 | 140 | 1 | 74 | 1.38e-30 | 120 |
| Msa0731590 | MtrunA17_Chr8g0341191 | 44.118 | 136 | 75 | 1 | 1 | 136 | 269 | 403 | 1.13e-28 | 120 |
| Msa0731590 | MtrunA17_Chr4g0075191 | 42.647 | 136 | 77 | 1 | 1 | 136 | 240 | 374 | 1.65e-28 | 119 |
| Msa0731590 | MtrunA17_Chr8g0392081 | 42.647 | 136 | 77 | 1 | 1 | 136 | 1 | 135 | 7.67e-28 | 114 |
| Msa0731590 | MtrunA17_Chr4g0058441 | 41.111 | 90 | 53 | 0 | 49 | 138 | 1 | 90 | 1.85e-17 | 84.7 |
| Msa0731590 | MtrunA17_Chr4g0006871 | 31.200 | 125 | 86 | 0 | 16 | 140 | 676 | 800 | 2.56e-14 | 76.3 |
| Msa0731590 | MtrunA17_Chr7g0237741 | 34.483 | 116 | 69 | 1 | 264 | 372 | 95 | 210 | 1.15e-12 | 68.2 |
| Msa0731590 | MtrunA17_Chr2g0323971 | 33.628 | 113 | 68 | 1 | 267 | 372 | 101 | 213 | 1.52e-12 | 67.8 |
| Msa0731590 | MtrunA17_Chr6g0450501 | 32.500 | 120 | 73 | 2 | 25 | 140 | 293 | 408 | 6.25e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0731590 | AT1G53300.1 | 43.119 | 327 | 180 | 3 | 175 | 495 | 372 | 698 | 8.36e-79 | 260 |
| Msa0731590 | AT5G65160.1 | 56.132 | 212 | 93 | 0 | 175 | 386 | 381 | 592 | 8.52e-75 | 247 |
| Msa0731590 | AT1G78120.1 | 58.744 | 223 | 91 | 1 | 176 | 397 | 305 | 527 | 5.34e-72 | 238 |
| Msa0731590 | AT2G42580.1 | 41.718 | 326 | 183 | 3 | 175 | 494 | 365 | 689 | 5.79e-72 | 242 |
| Msa0731590 | AT3G14950.1 | 41.433 | 321 | 182 | 3 | 180 | 494 | 408 | 728 | 2.93e-71 | 241 |
| Msa0731590 | AT5G10090.1 | 53.774 | 212 | 98 | 0 | 175 | 386 | 382 | 593 | 1.33e-67 | 228 |
| Msa0731590 | AT3G58620.1 | 39.264 | 326 | 191 | 4 | 175 | 494 | 356 | 680 | 1.43e-64 | 222 |
| Msa0731590 | AT1G78120.2 | 61.404 | 171 | 65 | 1 | 176 | 345 | 305 | 475 | 8.38e-54 | 188 |
| Msa0731590 | AT3G58620.2 | 38.351 | 279 | 165 | 4 | 175 | 447 | 356 | 633 | 5.96e-49 | 179 |
| Msa0731590 | AT1G04190.1 | 30.534 | 131 | 90 | 1 | 262 | 391 | 13 | 143 | 1.68e-13 | 72.0 |
| Msa0731590 | AT3G24255.7 | 29.752 | 121 | 79 | 2 | 21 | 138 | 6 | 123 | 9.70e-11 | 65.1 |
Find 102 sgRNAs with CRISPR-Local
Find 719 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAGTCGATTCCTGTCTTT+TGG | 0.132504 | 5_1:-42731189 | Msa0731590:CDS |
| GATATTAAGGATTTAAAATT+TGG | 0.140223 | 5_1:-42720577 | Msa0731590:CDS |
| CACCAATCAACTGAAAATTT+TGG | 0.179108 | 5_1:+42721859 | None:intergenic |
| AATATTAAGTCTAGACTTTC+GGG | 0.192182 | 5_1:-42731216 | Msa0731590:CDS |
| GAACTTTCATAAAAGCTTAT+TGG | 0.236183 | 5_1:-42731382 | Msa0731590:CDS |
| TATTGGTTGGTGTTAATATT+GGG | 0.243071 | 5_1:-42731365 | Msa0731590:CDS |
| AAATAATCAATTCGAAGTTT+TGG | 0.258392 | 5_1:-42723158 | Msa0731590:CDS |
| GATTGGTGTAACAAGATATT+TGG | 0.264113 | 5_1:-42721844 | Msa0731590:CDS |
| TTATTGGTTGGTGTTAATAT+TGG | 0.266834 | 5_1:-42731366 | Msa0731590:CDS |
| GCTGATGATACACTACTTCT+TGG | 0.279400 | 5_1:-42731480 | Msa0731590:CDS |
| TTCCAAAATGCAATGGAAAA+AGG | 0.284276 | 5_1:-42719807 | Msa0731590:three_prime_UTR |
| GTGTTAATATTGGGGATTCT+TGG | 0.303169 | 5_1:-42731356 | Msa0731590:CDS |
| TAATATTAAGTCTAGACTTT+CGG | 0.319481 | 5_1:-42731217 | Msa0731590:CDS |
| TCAAGAGTTAAAGAGATTTC+AGG | 0.320539 | 5_1:-42719937 | Msa0731590:CDS |
| GCTACGTGGTGAAGATATTA+AGG | 0.330275 | 5_1:-42720590 | Msa0731590:CDS |
| TCTAGCTGATGTTACTGCTT+TGG | 0.346144 | 5_1:+42721314 | None:intergenic |
| AATTTATTTGCGGAAATGTC+TGG | 0.346326 | 5_1:-42731414 | Msa0731590:CDS |
| AAAATTCCGTTTGTGTATCT+TGG | 0.351444 | 5_1:-42731294 | Msa0731590:CDS |
| TGCGGAAATGTCTGGCCTTA+AGG | 0.351779 | 5_1:-42731406 | Msa0731590:CDS |
| TAGGAAATTGCTCGATTATC+AGG | 0.352936 | 5_1:-42723241 | Msa0731590:CDS |
| CTTGCCACTTCTTCATCCCC+TGG | 0.357092 | 5_1:+42720646 | None:intergenic |
| AACAGATGGGAATCTCTTGC+TGG | 0.367982 | 5_1:+42720340 | None:intergenic |
| CTTCAAGGCATCAAAATTCA+TGG | 0.378167 | 5_1:-42721274 | Msa0731590:CDS |
| GTGTATCTTGGCTTGTCAAT+TGG | 0.382560 | 5_1:-42731282 | Msa0731590:CDS |
| GCATTTACCTCTCTGTTGCT+TGG | 0.397607 | 5_1:+42721351 | None:intergenic |
| GGCCAATGTCCGAGCATTAC+GGG | 0.400623 | 5_1:-42731445 | Msa0731590:CDS |
| AAATATAATGTTCCATTTGA+AGG | 0.401037 | 5_1:+42719850 | None:intergenic |
| CAACATTTCATAGTCTTGAA+TGG | 0.407126 | 5_1:+42720681 | None:intergenic |
| GGGCCAATGTCCGAGCATTA+CGG | 0.410923 | 5_1:-42731446 | Msa0731590:CDS |
| AATAATTTGTACACGGGCTA+TGG | 0.423672 | 5_1:-42731546 | Msa0731590:CDS |
| AAATATTACACTCCTTCAAA+TGG | 0.438222 | 5_1:-42719862 | Msa0731590:three_prime_UTR |
| AGTGCTTACCTGTTGATGAT+AGG | 0.450235 | 5_1:-42721811 | Msa0731590:CDS |
| ATTGGTTGGTGTTAATATTG+GGG | 0.450591 | 5_1:-42731364 | Msa0731590:CDS |
| AGTGGCAAGGGCTTTGTTTG+AGG | 0.452462 | 5_1:-42720632 | Msa0731590:CDS |
| CGCCCGTAATGCTCGGACAT+TGG | 0.459649 | 5_1:+42731443 | None:intergenic |
| CAAGGGCTTTGTTTGAGGCT+CGG | 0.466961 | 5_1:-42720627 | Msa0731590:CDS |
| TTTGTTTGTTTATAGGTTTG+AGG | 0.469251 | 5_1:-42721412 | Msa0731590:intron |
| GAGTGGAAACTTACTCTTCA+AGG | 0.469684 | 5_1:-42721289 | Msa0731590:CDS |
| GGCGGTCTTGAATTTATTTG+CGG | 0.471223 | 5_1:-42731424 | Msa0731590:CDS |
| GCAGCATGTCGTTCTAAGCT+AGG | 0.476776 | 5_1:-42721183 | Msa0731590:CDS |
| GAGAGGTAAATGCAGTGTTA+AGG | 0.483205 | 5_1:-42721341 | Msa0731590:CDS |
| TTATCAGGTCTATTTGCTGA+TGG | 0.483677 | 5_1:-42723226 | Msa0731590:CDS |
| CAAGCAAGTGTCGATGGTGC+TGG | 0.487932 | 5_1:-42720369 | Msa0731590:CDS |
| TACTTCTTGGAGAAAAGAGC+TGG | 0.488182 | 5_1:-42731467 | Msa0731590:CDS |
| GATTGAAGACCATCCCTACT+TGG | 0.492258 | 5_1:-42720013 | Msa0731590:CDS |
| CCTGTTGATGATAGGCGCAC+TGG | 0.501335 | 5_1:-42721803 | Msa0731590:CDS |
| CCAGTGCGCCTATCATCAAC+AGG | 0.502823 | 5_1:+42721803 | None:intergenic |
| TATCTTGGCTTGTCAATTGG+AGG | 0.516359 | 5_1:-42731279 | Msa0731590:CDS |
| TCAAGACCGCCCGTAATGCT+CGG | 0.520493 | 5_1:+42731436 | None:intergenic |
| TTTCATAAAAGCTTATTGGT+TGG | 0.523060 | 5_1:-42731378 | Msa0731590:CDS |
| CATACACGGCATATGCCTCT+TGG | 0.523385 | 5_1:+42721890 | None:intergenic |
| AGACATTACGTAACCTCACC+TGG | 0.525280 | 5_1:-42720517 | Msa0731590:intron |
| AAGCGTTGCTGAAGCTCGTA+AGG | 0.526613 | 5_1:-42721915 | Msa0731590:CDS |
| AATTAATCTTCATGTCATGT+TGG | 0.532710 | 5_1:-42723191 | Msa0731590:CDS |
| GGGAACATCAAGGTCGGTTG+TGG | 0.533452 | 5_1:-42731520 | Msa0731590:CDS |
| GCACTGGTTTACTTAGCATC+CGG | 0.538412 | 5_1:-42721787 | Msa0731590:CDS |
| CCCATCTGTTAATTTCCTCA+AGG | 0.541662 | 5_1:-42720327 | Msa0731590:intron |
| GTTCATGTAGTTGGAACGAT+GGG | 0.548608 | 5_1:-42720710 | Msa0731590:intron |
| GACAAGCCAAGATACACAAA+CGG | 0.548743 | 5_1:+42731288 | None:intergenic |
| TGGTTTACTTAGCATCCGGC+AGG | 0.553577 | 5_1:-42721783 | Msa0731590:intron |
| GTGTAACAAGATATTTGGTA+CGG | 0.556854 | 5_1:-42721839 | Msa0731590:CDS |
| GTGGAAAATAATTTGTACAC+GGG | 0.561428 | 5_1:-42731552 | Msa0731590:CDS |
| TGTGATGATGCAATCGTTGG+TGG | 0.562406 | 5_1:-42731571 | None:intergenic |
| GTAACATCAGCTAGAATGAG+TGG | 0.563164 | 5_1:-42721306 | Msa0731590:CDS |
| CAGCATGTCGTTCTAAGCTA+GGG | 0.566141 | 5_1:-42721182 | Msa0731590:CDS |
| ATAGCAAAGCAAGGCTAAGG+AGG | 0.574323 | 5_1:-42721104 | Msa0731590:CDS |
| CACCACGTAGCATCTTGAGT+TGG | 0.574730 | 5_1:+42720602 | None:intergenic |
| GTTATAGCAAAGCAAGGCTA+AGG | 0.577740 | 5_1:-42721107 | Msa0731590:CDS |
| ATTCATGTTATAGCAAAGCA+AGG | 0.578425 | 5_1:-42721113 | Msa0731590:CDS |
| TGTTGTGCTCTTCAGTAACA+AGG | 0.578964 | 5_1:-42720399 | Msa0731590:CDS |
| ACCTTGAGGAAATTAACAGA+TGG | 0.580115 | 5_1:+42720326 | None:intergenic |
| GCATGTGCAGTATACAATGA+AGG | 0.586516 | 5_1:-42721249 | Msa0731590:CDS |
| CCCTACTTGGCAAAATCAGA+AGG | 0.591318 | 5_1:-42720000 | Msa0731590:CDS |
| TTGTACACGGGCTATGGAGT+GGG | 0.594136 | 5_1:-42731540 | Msa0731590:CDS |
| CCTTGAGGAAATTAACAGAT+GGG | 0.594305 | 5_1:+42720327 | None:intergenic |
| CAGGGGATGAAGAAGTGGCA+AGG | 0.598230 | 5_1:-42720645 | Msa0731590:CDS |
| TGTTCATGTAGTTGGAACGA+TGG | 0.598462 | 5_1:-42720711 | Msa0731590:intron |
| GACTTAATATTAGACACCAC+AGG | 0.599726 | 5_1:+42731228 | None:intergenic |
| TGTTGATAAGAGAAAAGCCA+GGG | 0.605338 | 5_1:-42720663 | Msa0731590:CDS |
| TTTGTACACGGGCTATGGAG+TGG | 0.606582 | 5_1:-42731541 | Msa0731590:CDS |
| AGGGGATGAAGAAGTGGCAA+GGG | 0.610194 | 5_1:-42720644 | Msa0731590:CDS |
| AAAGCCAGGGGATGAAGAAG+TGG | 0.612053 | 5_1:-42720650 | Msa0731590:CDS |
| AACACACAAGCAAGTGTCGA+TGG | 0.612307 | 5_1:-42720375 | Msa0731590:CDS |
| ATGTTGATAAGAGAAAAGCC+AGG | 0.618320 | 5_1:-42720664 | Msa0731590:CDS |
| GCAAGTGTCGATGGTGCTGG+AGG | 0.619498 | 5_1:-42720366 | Msa0731590:CDS |
| GAGGGCATATTGTAATGCCA+AGG | 0.628743 | 5_1:-42721085 | Msa0731590:intron |
| GAATGTGATGATGCAATCGT+TGG | 0.633567 | 5_1:-42731574 | None:intergenic |
| ATATTGTGCCTTACCAGGTG+AGG | 0.633902 | 5_1:+42720504 | None:intergenic |
| ACTTCTTGGAGAAAAGAGCT+GGG | 0.634977 | 5_1:-42731466 | Msa0731590:CDS |
| CATAACAGAACTGAGTTGTG+TGG | 0.640314 | 5_1:+42721213 | None:intergenic |
| GGTGGAAAATAATTTGTACA+CGG | 0.647562 | 5_1:-42731553 | Msa0731590:CDS |
| TAGCAAAGCAAGGCTAAGGA+GGG | 0.656318 | 5_1:-42721103 | Msa0731590:CDS |
| TGGAGTGGGAACATCAAGGT+CGG | 0.660790 | 5_1:-42731526 | Msa0731590:CDS |
| CTCCAACTCAAGATGCTACG+TGG | 0.662963 | 5_1:-42720604 | Msa0731590:CDS |
| GCTATGGAGTGGGAACATCA+AGG | 0.669114 | 5_1:-42731530 | Msa0731590:CDS |
| ATATTAAGTCTAGACTTTCG+GGG | 0.675854 | 5_1:-42731215 | Msa0731590:CDS |
| AGTTGATCCAAGCAACAGAG+AGG | 0.695069 | 5_1:-42721358 | Msa0731590:CDS |
| GTTGTGCTCTTCAGTAACAA+GGG | 0.695733 | 5_1:-42720398 | Msa0731590:CDS |
| GAAGCTCGTAAGGTACCAAG+AGG | 0.704320 | 5_1:-42721905 | Msa0731590:CDS |
| TTAAGTCTAGACTTTCGGGG+TGG | 0.721711 | 5_1:-42731212 | Msa0731590:CDS |
| CAATGTCCGAGCATTACGGG+CGG | 0.729563 | 5_1:-42731442 | Msa0731590:CDS |
| GTTGATAAGAGAAAAGCCAG+GGG | 0.744650 | 5_1:-42720662 | Msa0731590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTATAAATATTT+TGG | + | chr5_1:42728691-42728710 | None:intergenic | 0.0% |
| !!! | TACAAAATTTTAATACTAAT+CGG | + | chr5_1:42720197-42720216 | None:intergenic | 10.0% |
| !!! | ATTAGTATTAAAATTTTGTA+GGG | - | chr5_1:42720197-42720216 | Msa0731590:intron | 10.0% |
| !!! | CTTTAATGATTAATTTTTTT+AGG | - | chr5_1:42720323-42720342 | Msa0731590:intron | 10.0% |
| !!! | CTCTTTTTTTTTTTTTTTTA+AGG | - | chr5_1:42720614-42720633 | Msa0731590:CDS | 10.0% |
| !! | TTAAATTGATAAAAAAAAAC+TGG | + | chr5_1:42721019-42721038 | None:intergenic | 10.0% |
| !! | GAATTTCTTAATTAAAAAAA+AGG | - | chr5_1:42721040-42721059 | Msa0731590:intron | 10.0% |
| !!! | TAAGTAAATTTTTTTTTATG+GGG | - | chr5_1:42721593-42721612 | Msa0731590:intron | 10.0% |
| !! | GTAGATTTAAATAAAAATTA+GGG | + | chr5_1:42721696-42721715 | None:intergenic | 10.0% |
| !! | TGTAGATTTAAATAAAAATT+AGG | + | chr5_1:42721697-42721716 | None:intergenic | 10.0% |
| !!! | CATAATAAATATTCAATTTT+TGG | - | chr5_1:42722009-42722028 | Msa0731590:intron | 10.0% |
| !! | TTAATTATAAATAAATGCAT+TGG | - | chr5_1:42722817-42722836 | Msa0731590:intron | 10.0% |
| !! | ATATAAAATGTAGTATAAAT+GGG | + | chr5_1:42723020-42723039 | None:intergenic | 10.0% |
| !! | AATATAAAATGTAGTATAAA+TGG | + | chr5_1:42723021-42723040 | None:intergenic | 10.0% |
| !! | ATATTATATTATTAATGCAA+TGG | - | chr5_1:42723082-42723101 | Msa0731590:intron | 10.0% |
| !! | AATTATATTAAATTTATCGT+TGG | - | chr5_1:42723137-42723156 | Msa0731590:intron | 10.0% |
| !! | AAAATAAATTACAAATTAAG+GGG | + | chr5_1:42723497-42723516 | None:intergenic | 10.0% |
| !!! | TCTCTATTTATTTTAATAAA+TGG | - | chr5_1:42725849-42725868 | Msa0731590:intron | 10.0% |
| !!! | AATTAATTTATTTCTTATTG+TGG | - | chr5_1:42726169-42726188 | Msa0731590:intron | 10.0% |
| !!! | ATTAATTTATTTCTTATTGT+GGG | - | chr5_1:42726170-42726189 | Msa0731590:intron | 10.0% |
| !!! | AAATAAAAATATTTGGTTTA+TGG | + | chr5_1:42726913-42726932 | None:intergenic | 10.0% |
| !! | AAAATAAAAATAAAATAGAC+GGG | + | chr5_1:42727217-42727236 | None:intergenic | 10.0% |
| !!! | TTCAGTTTTATTAATAATAT+AGG | - | chr5_1:42727242-42727261 | Msa0731590:intron | 10.0% |
| !! | TTCATATTAAAGATATTAAA+TGG | - | chr5_1:42727541-42727560 | Msa0731590:intron | 10.0% |
| !!! | CATTTATTTTTTTTTAAGTA+AGG | - | chr5_1:42728944-42728963 | Msa0731590:intron | 10.0% |
| !!! | TTTATTTTTAAGAGTTTAAT+TGG | - | chr5_1:42731057-42731076 | Msa0731590:intron | 10.0% |
| !!! | GATTAGTATTAAAATTTTGT+AGG | - | chr5_1:42720196-42720215 | Msa0731590:intron | 15.0% |
| !!! | TTGAATTGTATGTTTTATTT+TGG | + | chr5_1:42720387-42720406 | None:intergenic | 15.0% |
| !!! | TCATTAAAGATTTTTTTTGA+GGG | + | chr5_1:42720424-42720443 | None:intergenic | 15.0% |
| !!! | ATCATTAAAGATTTTTTTTG+AGG | + | chr5_1:42720425-42720444 | None:intergenic | 15.0% |
| !!! | GAAAATATGAACTTTTTTTT+TGG | + | chr5_1:42720529-42720548 | None:intergenic | 15.0% |
| !!! | AAATATTTGAACTTTTTTTG+AGG | + | chr5_1:42720554-42720573 | None:intergenic | 15.0% |
| !!! | CTGTAAAATATTTTTTATCT+AGG | - | chr5_1:42720719-42720738 | Msa0731590:intron | 15.0% |
| !!! | TTAACTTTTGGAAAAAAAAA+AGG | - | chr5_1:42720889-42720908 | Msa0731590:intron | 15.0% |
| !! | TAATTAACCCTAAAAATTAA+GGG | + | chr5_1:42721144-42721163 | None:intergenic | 15.0% |
| !! | ATAATTAACCCTAAAAATTA+AGG | + | chr5_1:42721145-42721164 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr5_1:42721622-42721641 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr5_1:42721621-42721640 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | + | chr5_1:42721400-42721419 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr5_1:42721531-42721550 | Msa0731590:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr5_1:42721621-42721640 | Msa0731590:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr5_1:42721622-42721641 | Msa0731590:intron | 15.0% |
| !! | TTATACTATTTAGTGAAAAA+TGG | - | chr5_1:42721841-42721860 | Msa0731590:CDS | 15.0% |
| !! | GGATATATACAAAAAAAATT+AGG | - | chr5_1:42722327-42722346 | Msa0731590:intron | 15.0% |
| !!! | ACAATCATCATTTTTTTTTA+GGG | + | chr5_1:42722611-42722630 | None:intergenic | 15.0% |
| !!! | TTATACCATTTTTTTGTTAA+AGG | - | chr5_1:42722667-42722686 | Msa0731590:intron | 15.0% |
| !!! | TATACCATTTTTTTGTTAAA+GGG | - | chr5_1:42722668-42722687 | Msa0731590:intron | 15.0% |
| !! | TTACTTTACAATTATACTAA+TGG | + | chr5_1:42722974-42722993 | None:intergenic | 15.0% |
| !!! | TAATATAATTTGTAAACTTC+TGG | + | chr5_1:42723127-42723146 | None:intergenic | 15.0% |
| !! | AAATAATTTATTTGAACTTC+AGG | + | chr5_1:42723747-42723766 | None:intergenic | 15.0% |
| !! | GTTCAAATAAATTATTTGAA+AGG | - | chr5_1:42723750-42723769 | Msa0731590:intron | 15.0% |
| !! | ATTAATATTTCATAAGTTTC+AGG | + | chr5_1:42724066-42724085 | None:intergenic | 15.0% |
| !! | ATATGTTTCTTAAAAACAAA+TGG | + | chr5_1:42724581-42724600 | None:intergenic | 15.0% |
| !!! | TATAATCGATTTTATAATAG+CGG | - | chr5_1:42724840-42724859 | Msa0731590:intron | 15.0% |
| !! | AAATTATAAACAACTTGAAT+TGG | - | chr5_1:42725078-42725097 | Msa0731590:intron | 15.0% |
| !! | AGTTACTCAAAATATTTAAT+TGG | + | chr5_1:42725439-42725458 | None:intergenic | 15.0% |
| !! | TTGAAAATAATTAATAATGG+TGG | - | chr5_1:42725765-42725784 | Msa0731590:intron | 15.0% |
| !! | AATAAATAGAGATTTCAATT+AGG | + | chr5_1:42725841-42725860 | None:intergenic | 15.0% |
| !!! | ATTTATTTTAATAAATGGAG+AGG | - | chr5_1:42725854-42725873 | Msa0731590:intron | 15.0% |
| !! | AAAATATGAGTCATATTTAT+AGG | + | chr5_1:42726028-42726047 | None:intergenic | 15.0% |
| !! | ATCTATTATCATAAATTGAA+TGG | - | chr5_1:42726348-42726367 | Msa0731590:intron | 15.0% |
| !!! | ATTTTAACTAATGAAATGTT+GGG | + | chr5_1:42726826-42726845 | None:intergenic | 15.0% |
| !!! | AATTTTAACTAATGAAATGT+TGG | + | chr5_1:42726827-42726846 | None:intergenic | 15.0% |
| !! | ATAAAAAAAATTCATGTTAC+AGG | - | chr5_1:42727015-42727034 | Msa0731590:intron | 15.0% |
| !! | TAAAAAAAATTCATGTTACA+GGG | - | chr5_1:42727016-42727035 | Msa0731590:intron | 15.0% |
| !! | TTTATAATATTATGGATTTG+TGG | - | chr5_1:42727055-42727074 | Msa0731590:intron | 15.0% |
| !! | TTATAATATTATGGATTTGT+GGG | - | chr5_1:42727056-42727075 | Msa0731590:intron | 15.0% |
| !! | AATGAAACTTATATAAAGTT+TGG | - | chr5_1:42727147-42727166 | Msa0731590:intron | 15.0% |
| !! | TAATATCTTTAATATGAAGT+AGG | + | chr5_1:42727539-42727558 | None:intergenic | 15.0% |
| !!! | ATTTTATCTACTTCTAAATA+GGG | - | chr5_1:42727567-42727586 | Msa0731590:intron | 15.0% |
| !! | AATAATATCAATAAACAAGT+CGG | - | chr5_1:42727764-42727783 | Msa0731590:intron | 15.0% |
| !! | AAAAAAAAACTATATTTGAG+AGG | - | chr5_1:42728709-42728728 | Msa0731590:intron | 15.0% |
| !!! | TATTTTCATAAGTTTATGTT+TGG | - | chr5_1:42728916-42728935 | Msa0731590:intron | 15.0% |
| !!! | ATTTTTTTTTAAGTAAGGTT+TGG | - | chr5_1:42728949-42728968 | Msa0731590:intron | 15.0% |
| !! | AAAATTATAAAGTTGTATGA+AGG | - | chr5_1:42729142-42729161 | Msa0731590:intron | 15.0% |
| !! | AAATTATAAAGTTGTATGAA+GGG | - | chr5_1:42729143-42729162 | Msa0731590:intron | 15.0% |
| !! | NNNNNNNNNGACAAATATAG+CGG | + | chr5_1:42729201-42729220 | None:intergenic | 15.0% |
| !! | AATAAAATTGTTTATTGCTA+AGG | + | chr5_1:42729323-42729342 | None:intergenic | 15.0% |
| !!! | AATTTTGATAAGATATACAT+TGG | + | chr5_1:42729357-42729376 | None:intergenic | 15.0% |
| !!! | GATATTAAGGATTTAAAATT+TGG | - | chr5_1:42730780-42730799 | Msa0731590:intron | 15.0% |
| !! | TTAATACAACAATGATATAA+TGG | - | chr5_1:42731166-42731185 | Msa0731590:intron | 15.0% |
| !! | TAATATTAAGTCTAGACTTT+CGG | - | chr5_1:42720140-42720159 | Msa0731590:intron | 20.0% |
| !!! | TTAAGGGTTAATTATGTTTT+TGG | + | chr5_1:42720224-42720243 | None:intergenic | 20.0% |
| !!! | TTTTTTAGGGAAATCTTTAA+TGG | - | chr5_1:42720309-42720328 | Msa0731590:intron | 20.0% |
| !!! | AAAAAATATTTTACAGAGAC+AGG | + | chr5_1:42720715-42720734 | None:intergenic | 20.0% |
| !! | AAAAAACAAAACATTTGAGA+TGG | + | chr5_1:42720827-42720846 | None:intergenic | 20.0% |
| !!! | TTTTTTTCCAAAAGTTAAAC+TGG | + | chr5_1:42720887-42720906 | None:intergenic | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | + | chr5_1:42721270-42721289 | None:intergenic | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | + | chr5_1:42721271-42721290 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | + | chr5_1:42721365-42721384 | None:intergenic | 20.0% |
| !!! | TTTAGTGAAAAATGGATTAA+TGG | - | chr5_1:42721849-42721868 | Msa0731590:CDS | 20.0% |
| !!! | AATATTCAATTTTTGGATGA+AGG | - | chr5_1:42722016-42722035 | Msa0731590:intron | 20.0% |
| !! | AAAAATTAGGTTTAGTAGTA+AGG | - | chr5_1:42722340-42722359 | Msa0731590:intron | 20.0% |
| !!! | AGTGTTTAGTTTAAAATTAG+AGG | - | chr5_1:42722536-42722555 | Msa0731590:intron | 20.0% |
| !!! | GTGTTTAGTTTAAAATTAGA+GGG | - | chr5_1:42722537-42722556 | Msa0731590:intron | 20.0% |
| !!! | TGTTTAGTTTAAAATTAGAG+GGG | - | chr5_1:42722538-42722557 | Msa0731590:intron | 20.0% |
| !!! | CACAATCATCATTTTTTTTT+AGG | + | chr5_1:42722612-42722631 | None:intergenic | 20.0% |
| !!! | ACTTTCTTTTTGTTTTTTGA+GGG | - | chr5_1:42722754-42722773 | Msa0731590:intron | 20.0% |
| !! | AAATGCATTGGAAATTAATT+TGG | - | chr5_1:42722829-42722848 | Msa0731590:intron | 20.0% |
| !! | ATTTGGAAAATGTTTAATGA+AGG | - | chr5_1:42722846-42722865 | Msa0731590:intron | 20.0% |
| !! | TAGATAGATTGAAAGAATAT+TGG | - | chr5_1:42723584-42723603 | Msa0731590:intron | 20.0% |
| !! | AGATAGATTGAAAGAATATT+GGG | - | chr5_1:42723585-42723604 | Msa0731590:intron | 20.0% |
| !!! | TTTTTATATTTGGAATCGAT+TGG | + | chr5_1:42723928-42723947 | None:intergenic | 20.0% |
| !!! | TGTTTGAGGATTTTTATATT+TGG | + | chr5_1:42723938-42723957 | None:intergenic | 20.0% |
| !! | AAAAAGAAAATATTTGCAGA+TGG | - | chr5_1:42724230-42724249 | Msa0731590:intron | 20.0% |
| !!! | GTTGTTTATAATTTTCTTGA+GGG | + | chr5_1:42725072-42725091 | None:intergenic | 20.0% |
| !!! | AGTTGTTTATAATTTTCTTG+AGG | + | chr5_1:42725073-42725092 | None:intergenic | 20.0% |
| !! | TACTCAAAATATTTAATTGG+CGG | + | chr5_1:42725436-42725455 | None:intergenic | 20.0% |
| !! | AAGAGATAGACATAAAAAAT+AGG | + | chr5_1:42725817-42725836 | None:intergenic | 20.0% |
| !! | TTGAATGATCAAAGTAATTA+AGG | + | chr5_1:42725990-42726009 | None:intergenic | 20.0% |
| !!! | AATTATGAGTTTCTTTTTTG+TGG | + | chr5_1:42726300-42726319 | None:intergenic | 20.0% |
| !!! | TCTATTTTATCCTCAATTTT+TGG | - | chr5_1:42726378-42726397 | Msa0731590:intron | 20.0% |
| !!! | CTATTTTATCCTCAATTTTT+GGG | - | chr5_1:42726379-42726398 | Msa0731590:intron | 20.0% |
| !! | CCAAATCTTTATATTTATAG+TGG | + | chr5_1:42726455-42726474 | None:intergenic | 20.0% |
| !! | CCACTATAAATATAAAGATT+TGG | - | chr5_1:42726452-42726471 | Msa0731590:intron | 20.0% |
| !! | CTATAAATATAAAGATTTGG+TGG | - | chr5_1:42726455-42726474 | Msa0731590:intron | 20.0% |
| !!! | ATTTTCCTTAAAAAAAAGAG+TGG | + | chr5_1:42726505-42726524 | None:intergenic | 20.0% |
| !!! | AGTTTTTACCCTTTTTTAAA+GGG | - | chr5_1:42726666-42726685 | Msa0731590:intron | 20.0% |
| !!! | AAAATATTTGGTTTATGGTA+AGG | + | chr5_1:42726908-42726927 | None:intergenic | 20.0% |
| !! | TATAATATTATGGATTTGTG+GGG | - | chr5_1:42727057-42727076 | Msa0731590:intron | 20.0% |
| !!! | CTTTTAAATAGGTCTATAAA+AGG | + | chr5_1:42727486-42727505 | None:intergenic | 20.0% |
| !! | TATAGACCTATTTAAAAGTA+TGG | - | chr5_1:42727488-42727507 | Msa0731590:intron | 20.0% |
| !! | CTATTTAGAAGTAGATAAAA+TGG | + | chr5_1:42727568-42727587 | None:intergenic | 20.0% |
| !!! | CATTTTATCTACTTCTAAAT+AGG | - | chr5_1:42727566-42727585 | Msa0731590:intron | 20.0% |
| !!! | GATTTTTTAAACAGACTTTA+AGG | + | chr5_1:42727671-42727690 | None:intergenic | 20.0% |
| !!! | GCTTTTTTATAACTTAAGTT+TGG | - | chr5_1:42727804-42727823 | Msa0731590:intron | 20.0% |
| !!! | TTACATAGGCTTTTTTAAAT+AGG | - | chr5_1:42727836-42727855 | Msa0731590:intron | 20.0% |
| !! | ACATGTTTATTTAAAAGGTT+AGG | + | chr5_1:42727880-42727899 | None:intergenic | 20.0% |
| !! | AATATGAATCCCTAAAATTT+AGG | + | chr5_1:42728047-42728066 | None:intergenic | 20.0% |
| !!! | AAATAATCAATTCGAAGTTT+TGG | - | chr5_1:42728199-42728218 | Msa0731590:intron | 20.0% |
| !! | AAATCAAATTTGCCAAATAA+TGG | - | chr5_1:42728239-42728258 | Msa0731590:intron | 20.0% |
| !!! | TATTTTATTCCAAACATAGT+GGG | + | chr5_1:42728327-42728346 | None:intergenic | 20.0% |
| !!! | TTTTGAATGGTAAATATCAT+TGG | + | chr5_1:42728409-42728428 | None:intergenic | 20.0% |
| !! | GTAATTTAGTCCAATTATAT+AGG | + | chr5_1:42728599-42728618 | None:intergenic | 20.0% |
| !! | GAATATTTGAACTTTATTGT+TGG | - | chr5_1:42728621-42728640 | Msa0731590:intron | 20.0% |
| !!! | TAAATTTCTGAAATCGATAT+AGG | - | chr5_1:42728646-42728665 | Msa0731590:intron | 20.0% |
| !!! | TAAATATTTTGGAAGAAAGT+TGG | + | chr5_1:42728680-42728699 | None:intergenic | 20.0% |
| !!! | TCAAATAATTTTGATTCTTG+TGG | - | chr5_1:42728886-42728905 | Msa0731590:intron | 20.0% |
| !! | ATTGTGCATTAAGAATAAAT+TGG | - | chr5_1:42729002-42729021 | Msa0731590:intron | 20.0% |
| !! | AATTATAAAGTTGTATGAAG+GGG | - | chr5_1:42729144-42729163 | Msa0731590:intron | 20.0% |
| !!! | ATTGAACTTTGTTTGTTTAT+AGG | - | chr5_1:42729938-42729957 | Msa0731590:intron | 20.0% |
| !!! | TATTATTTTGTTCATGTAGT+TGG | - | chr5_1:42730638-42730657 | Msa0731590:intron | 20.0% |
| !!! | TATTTAACAGCATTTGAAAT+CGG | + | chr5_1:42730930-42730949 | None:intergenic | 20.0% |
| !! | GTTATATAAGTAAGAAACAA+TGG | + | chr5_1:42731301-42731320 | None:intergenic | 20.0% |
| !!! | TCCATTTTTGTATATTTTGA+AGG | + | chr5_1:42731400-42731419 | None:intergenic | 20.0% |
| !! | AAATATAATGTTCCATTTGA+AGG | + | chr5_1:42731510-42731529 | None:intergenic | 20.0% |
| !! | TTTTATGAAAGTTCACCTTA+AGG | + | chr5_1:42719969-42719988 | None:intergenic | 25.0% |
| ! | GAACTTTCATAAAAGCTTAT+TGG | - | chr5_1:42719975-42719994 | Msa0731590:CDS | 25.0% |
| ! | TTTCATAAAAGCTTATTGGT+TGG | - | chr5_1:42719979-42719998 | Msa0731590:CDS | 25.0% |
| !!! | TTATTGGTTGGTGTTAATAT+TGG | - | chr5_1:42719991-42720010 | Msa0731590:CDS | 25.0% |
| !!! | TATTGGTTGGTGTTAATATT+GGG | - | chr5_1:42719992-42720011 | Msa0731590:CDS | 25.0% |
| !!! | AGCATCTATTTTAAATTGCA+AGG | - | chr5_1:42720035-42720054 | Msa0731590:intron | 25.0% |
| !!! | ATCTATTTTAAATTGCAAGG+TGG | - | chr5_1:42720038-42720057 | Msa0731590:intron | 25.0% |
| !!! | TCTATTTTAAATTGCAAGGT+GGG | - | chr5_1:42720039-42720058 | Msa0731590:intron | 25.0% |
| ! | AATATTAAGTCTAGACTTTC+GGG | - | chr5_1:42720141-42720160 | Msa0731590:intron | 25.0% |
| !!! | TTTTTTTAAGGACACTCAAT+TGG | - | chr5_1:42720626-42720645 | Msa0731590:CDS | 25.0% |
| !!! | GACTCTCTTTATTTTTTTTG+AGG | - | chr5_1:42720751-42720770 | Msa0731590:intron | 25.0% |
| !!! | TCTCTTTATTTTTTTTGAGG+AGG | - | chr5_1:42720754-42720773 | Msa0731590:intron | 25.0% |
| ! | AAACTGGCTGAATATATTAT+AGG | + | chr5_1:42720871-42720890 | None:intergenic | 25.0% |
| !!! | TTTTGGAAAAAAAAAAGGCA+TGG | - | chr5_1:42720894-42720913 | Msa0731590:intron | 25.0% |
| ! | AACTGGAATTGAAATTAGTA+AGG | + | chr5_1:42721002-42721021 | None:intergenic | 25.0% |
| ! | TGTTTAGTTAAAAACTAGAG+GGG | + | chr5_1:42721114-42721133 | None:intergenic | 25.0% |
| ! | GTGTTTAGTTAAAAACTAGA+GGG | + | chr5_1:42721115-42721134 | None:intergenic | 25.0% |
| ! | AGTGTTTAGTTAAAAACTAG+AGG | + | chr5_1:42721116-42721135 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | + | chr5_1:42721237-42721256 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr5_1:42721559-42721578 | Msa0731590:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr5_1:42721560-42721579 | Msa0731590:intron | 25.0% |
| ! | CTTCTATCTAGTGAAAAAAA+AGG | - | chr5_1:42721926-42721945 | Msa0731590:CDS | 25.0% |
| !!! | AAAAGTTAAGGTTTTATCTC+AGG | + | chr5_1:42721965-42721984 | None:intergenic | 25.0% |
| !! | AGATAAAACCTTAACTTTTG+AGG | - | chr5_1:42721966-42721985 | Msa0731590:intron | 25.0% |
| ! | TTGATAGAAACTGAAATTCT+AGG | - | chr5_1:42722072-42722091 | Msa0731590:intron | 25.0% |
| ! | AGCATATATTGTTGAAATCA+AGG | - | chr5_1:42722176-42722195 | Msa0731590:intron | 25.0% |
| !!! | ATCAAGAGAAATTTGCTAAT+TGG | - | chr5_1:42722212-42722231 | Msa0731590:intron | 25.0% |
| ! | GTTTGAACACTGTTTAATTA+AGG | - | chr5_1:42722306-42722325 | Msa0731590:intron | 25.0% |
| !!! | CTAATCTCTAAAATTCTTGT+CGG | - | chr5_1:42722481-42722500 | Msa0731590:intron | 25.0% |
| !! | ATCAATTTATAGAGTATCCA+CGG | + | chr5_1:42722635-42722654 | None:intergenic | 25.0% |
| !!! | GTTTGACTTTCTTTCTTTTT+TGG | - | chr5_1:42722720-42722739 | Msa0731590:intron | 25.0% |
| !!! | CACTTTCTTTTTGTTTTTTG+AGG | - | chr5_1:42722753-42722772 | Msa0731590:intron | 25.0% |
| !!! | CTTTCTTTTTGTTTTTTGAG+GGG | - | chr5_1:42722755-42722774 | Msa0731590:intron | 25.0% |
| !! | AATGTGAAAATCAAAAGTAC+CGG | - | chr5_1:42722873-42722892 | Msa0731590:intron | 25.0% |
| !!! | TAGACCAAATTATTTTGTTC+CGG | + | chr5_1:42722895-42722914 | None:intergenic | 25.0% |
| ! | TATTAAATTTATCGTTGGCA+AGG | - | chr5_1:42723142-42723161 | Msa0731590:intron | 25.0% |
| ! | TTCTGCATCATAATAAATCT+GGG | + | chr5_1:42723181-42723200 | None:intergenic | 25.0% |
| ! | TTTCTGCATCATAATAAATC+TGG | + | chr5_1:42723182-42723201 | None:intergenic | 25.0% |
| ! | AACTTTAGACGTTTAAAGAA+CGG | + | chr5_1:42723362-42723381 | None:intergenic | 25.0% |
| ! | AAAGTAGAATTTAGAAGGTA+TGG | + | chr5_1:42723410-42723429 | None:intergenic | 25.0% |
| ! | ATACCTTCTAAATTCTACTT+TGG | - | chr5_1:42723409-42723428 | Msa0731590:intron | 25.0% |
| ! | TACCTTCTAAATTCTACTTT+GGG | - | chr5_1:42723410-42723429 | Msa0731590:intron | 25.0% |
| ! | ATAAATTACAAATTAAGGGG+AGG | + | chr5_1:42723494-42723513 | None:intergenic | 25.0% |
| !! | TTCTCATCTGAGTAAATTTT+TGG | - | chr5_1:42723521-42723540 | Msa0731590:intron | 25.0% |
| ! | TCTATCTAAGTGCATTATAT+TGG | + | chr5_1:42723572-42723591 | None:intergenic | 25.0% |
| !! | GATCAGTTTTCTCAATATTA+GGG | - | chr5_1:42723693-42723712 | Msa0731590:intron | 25.0% |
| !! | ATCAGTTTTCTCAATATTAG+GGG | - | chr5_1:42723694-42723713 | Msa0731590:intron | 25.0% |
| ! | AAACAAGAAAATGAGCTAAA+AGG | - | chr5_1:42723953-42723972 | Msa0731590:intron | 25.0% |
| ! | AAGTTTATATATCCTCGTTT+GGG | + | chr5_1:42723988-42724007 | None:intergenic | 25.0% |
| ! | AAAGTTTATATATCCTCGTT+TGG | + | chr5_1:42723989-42724008 | None:intergenic | 25.0% |
| ! | AATATAGCACTATATGTGAT+TGG | - | chr5_1:42724165-42724184 | Msa0731590:intron | 25.0% |
| !! | CTTTGTAAAGCTGAAATTTT+TGG | - | chr5_1:42724283-42724302 | Msa0731590:intron | 25.0% |
| !! | TATGATTTTTCGCATGAATA+AGG | - | chr5_1:42724350-42724369 | Msa0731590:intron | 25.0% |
| !!! | ATTTGTCGATTTTAAGGATT+TGG | - | chr5_1:42724805-42724824 | Msa0731590:intron | 25.0% |
| !!! | ACAAATTTTAGAATCTCTTC+AGG | + | chr5_1:42724886-42724905 | None:intergenic | 25.0% |
| ! | TTATACATACAAGAAACTTG+CGG | - | chr5_1:42725301-42725320 | Msa0731590:intron | 25.0% |
| !! | TGCGGTTTTCTAATTTTAAA+AGG | - | chr5_1:42725319-42725338 | Msa0731590:intron | 25.0% |
| !!! | GGTTTTCTAATTTTAAAAGG+AGG | - | chr5_1:42725322-42725341 | Msa0731590:intron | 25.0% |
| ! | TTACTAAGAAAAAACCCAAT+GGG | + | chr5_1:42725641-42725660 | None:intergenic | 25.0% |
| !!! | TTCTTAGTAAGGTTTTAATG+AGG | - | chr5_1:42725651-42725670 | Msa0731590:intron | 25.0% |
| ! | GAAATGGAAAAGAGATTAAA+TGG | + | chr5_1:42725713-42725732 | None:intergenic | 25.0% |
| ! | ATATCTTCAAATGGAAGAAA+TGG | + | chr5_1:42725729-42725748 | None:intergenic | 25.0% |
| ! | TGTGTCTATATATCTTCAAA+TGG | + | chr5_1:42725738-42725757 | None:intergenic | 25.0% |
| ! | AGATAGACATAAAAAATAGG+TGG | + | chr5_1:42725814-42725833 | None:intergenic | 25.0% |
| ! | ATATAACTCCTATAAGTGAA+TGG | - | chr5_1:42725952-42725971 | Msa0731590:intron | 25.0% |
| ! | TAGAGACATAAAATAAGAGA+AGG | + | chr5_1:42726427-42726446 | None:intergenic | 25.0% |
| !!! | TCTTACCACTCTTTTTTTTA+AGG | - | chr5_1:42726497-42726516 | Msa0731590:intron | 25.0% |
| !!! | GAGTTTTTACCCTTTTTTAA+AGG | - | chr5_1:42726665-42726684 | Msa0731590:intron | 25.0% |
| !!! | GTTTTTACCCTTTTTTAAAG+GGG | - | chr5_1:42726667-42726686 | Msa0731590:intron | 25.0% |
| !!! | TTTTTACCCTTTTTTAAAGG+GGG | - | chr5_1:42726668-42726687 | Msa0731590:intron | 25.0% |
| ! | TAAAAGCTTATTTCACTGTA+AGG | - | chr5_1:42727645-42727664 | Msa0731590:intron | 25.0% |
| ! | TCAAGAAACAACTCAAATAA+CGG | + | chr5_1:42727693-42727712 | None:intergenic | 25.0% |
| !!! | TATTTGAGTTGTTTCTTGAT+TGG | - | chr5_1:42727694-42727713 | Msa0731590:intron | 25.0% |
| ! | TTTGGTCTATTTACTTACAT+AGG | - | chr5_1:42727822-42727841 | Msa0731590:intron | 25.0% |
| ! | TTATTTAAAAGGTTAGGCTT+AGG | + | chr5_1:42727874-42727893 | None:intergenic | 25.0% |
| !! | ACCTTTTAAATAAACATGTC+AGG | - | chr5_1:42727881-42727900 | Msa0731590:intron | 25.0% |
| ! | ACCTGACATGTTTATTTAAA+AGG | + | chr5_1:42727885-42727904 | None:intergenic | 25.0% |
| ! | ATACAATGAAACTGAAGTAT+AGG | - | chr5_1:42727955-42727974 | Msa0731590:intron | 25.0% |
| ! | AATTAATCTTCATGTCATGT+TGG | - | chr5_1:42728166-42728185 | Msa0731590:intron | 25.0% |
| !! | TTTTTATAACTTCGTTTTCG+AGG | - | chr5_1:42728276-42728295 | Msa0731590:intron | 25.0% |
| !! | GTATTTTATTCCAAACATAG+TGG | + | chr5_1:42728328-42728347 | None:intergenic | 25.0% |
| !! | AAGAACATCATCTTTTTGAA+TGG | + | chr5_1:42728422-42728441 | None:intergenic | 25.0% |
| ! | CATCAATTTGTAAAGATTGT+TGG | + | chr5_1:42728448-42728467 | None:intergenic | 25.0% |
| !!! | TCATGCTTTTTTTGGTTTTT+TGG | - | chr5_1:42728485-42728504 | Msa0731590:intron | 25.0% |
| ! | ATTTGATCTGCCTATATAAT+TGG | - | chr5_1:42728586-42728605 | Msa0731590:intron | 25.0% |
| !!! | TTGATGATGAATCAATCAAA+AGG | + | chr5_1:42728866-42728885 | None:intergenic | 25.0% |
| ! | ATTTATGTATATTTCGCCAT+TGG | - | chr5_1:42729639-42729658 | Msa0731590:intron | 25.0% |
| ! | ACAAGATAAGTCTCAAAAAA+CGG | + | chr5_1:42729702-42729721 | None:intergenic | 25.0% |
| ! | TTTGTTTGTTTATAGGTTTG+AGG | - | chr5_1:42729945-42729964 | Msa0731590:intron | 25.0% |
| !! | ATCTAACATTTAAAGTACCT+TGG | + | chr5_1:42730292-42730311 | None:intergenic | 25.0% |
| !!! | GTTTTAGAAAAAAAGGACAT+CGG | + | chr5_1:42730581-42730600 | None:intergenic | 25.0% |
| !!! | ACGAAGAGTTTTAGAAAAAA+AGG | + | chr5_1:42730588-42730607 | None:intergenic | 25.0% |
| ! | GATTTCAAATGCTGTTAAAT+AGG | - | chr5_1:42730929-42730948 | Msa0731590:intron | 25.0% |
| ! | TTAAAAATAAACCAACCTTG+AGG | + | chr5_1:42731048-42731067 | None:intergenic | 25.0% |
| !! | GTTATTTCAATATCGAAACT+AGG | - | chr5_1:42731275-42731294 | Msa0731590:CDS | 25.0% |
| !!! | TTTTGTATATTTTGAAGGCT+GGG | + | chr5_1:42731395-42731414 | None:intergenic | 25.0% |
| !!! | TTTTTGTATATTTTGAAGGC+TGG | + | chr5_1:42731396-42731415 | None:intergenic | 25.0% |
| ! | GCCTTCAAAATATACAAAAA+TGG | - | chr5_1:42731396-42731415 | Msa0731590:CDS | 25.0% |
| ! | AAATATTACACTCCTTCAAA+TGG | - | chr5_1:42731495-42731514 | Msa0731590:CDS | 25.0% |
| ! | GGTGGAAAATAATTTGTACA+CGG | - | chr5_1:42719804-42719823 | Msa0731590:three_prime_UTR | 30.0% |
| ! | GTGGAAAATAATTTGTACAC+GGG | - | chr5_1:42719805-42719824 | Msa0731590:three_prime_UTR | 30.0% |
| AATTTATTTGCGGAAATGTC+TGG | - | chr5_1:42719943-42719962 | Msa0731590:CDS | 30.0% | |
| !! | ATTGGTTGGTGTTAATATTG+GGG | - | chr5_1:42719993-42720012 | Msa0731590:CDS | 30.0% |
| AAAATTCCGTTTGTGTATCT+TGG | - | chr5_1:42720063-42720082 | Msa0731590:intron | 30.0% | |
| !!! | ATCCTCACAGATTAGTTTTT+TGG | - | chr5_1:42720103-42720122 | Msa0731590:intron | 30.0% |
| !!! | TCCTCACAGATTAGTTTTTT+GGG | - | chr5_1:42720104-42720123 | Msa0731590:intron | 30.0% |
| ATATTAAGTCTAGACTTTCG+GGG | - | chr5_1:42720142-42720161 | Msa0731590:intron | 30.0% | |
| TTTGGACTAAATCACTCAAT+TGG | - | chr5_1:42720589-42720608 | Msa0731590:CDS | 30.0% | |
| !! | TATTCAGCCAGTTTAACTTT+TGG | - | chr5_1:42720877-42720896 | Msa0731590:intron | 30.0% |
| !! | TAGATAGTTCGATGGATTTT+AGG | + | chr5_1:42720976-42720995 | None:intergenic | 30.0% |
| !!! | TAAGGTTTTAGATAGTTCGA+TGG | + | chr5_1:42720984-42721003 | None:intergenic | 30.0% |
| GTTATTTAAGAAGACCTCAA+GGG | + | chr5_1:42722569-42722588 | None:intergenic | 30.0% | |
| ! | TGTTATTTAAGAAGACCTCA+AGG | + | chr5_1:42722568-42722587 | None:intergenic | 30.0% |
| ! | ACTTACCTCCCTTAATTTTT+AGG | - | chr5_1:42721133-42721152 | Msa0731590:CDS | 30.0% |
| ! | CTTACCTCCCTTAATTTTTA+GGG | - | chr5_1:42721134-42721153 | Msa0731590:CDS | 30.0% |
| TTAACCCTAAAAATTAAGGG+AGG | + | chr5_1:42721141-42721160 | None:intergenic | 30.0% | |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr5_1:42721177-42721196 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr5_1:42721178-42721197 | None:intergenic | 30.0% |
| CAGTGCAGAAAAACAAAATT+AGG | + | chr5_1:42721238-42721257 | None:intergenic | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | + | chr5_1:42721497-42721516 | None:intergenic | 30.0% | |
| !! | TTTCAAGGTCGCTATTTTAT+AGG | - | chr5_1:42721652-42721671 | Msa0731590:intron | 30.0% |
| !! | TTCAAGGTCGCTATTTTATA+GGG | - | chr5_1:42721653-42721672 | Msa0731590:intron | 30.0% |
| ACTAACAGTGTTACATGATA+GGG | + | chr5_1:42721728-42721747 | None:intergenic | 30.0% | |
| AACTAACAGTGTTACATGAT+AGG | + | chr5_1:42721729-42721748 | None:intergenic | 30.0% | |
| !! | GTGAAAAATGGATTAATGGA+AGG | - | chr5_1:42721853-42721872 | Msa0731590:CDS | 30.0% |
| CTAGATAAACCAAATTCAAG+AGG | - | chr5_1:42722103-42722122 | Msa0731590:intron | 30.0% | |
| ATTCTTCATCCTCTTGAATT+TGG | + | chr5_1:42722115-42722134 | None:intergenic | 30.0% | |
| GAAATCTTAGAAGAAGAAGA+GGG | - | chr5_1:42722234-42722253 | Msa0731590:intron | 30.0% | |
| CTAACAGTGTTACAATAGAA+GGG | - | chr5_1:42722508-42722527 | Msa0731590:intron | 30.0% | |
| ! | TTAGTTTAAAATTAGAGGGG+AGG | - | chr5_1:42722541-42722560 | Msa0731590:intron | 30.0% |
| ! | TGTTATTTAAGAAGACCTCA+AGG | - | chr5_1:42722568-42722587 | Msa0731590:intron | 30.0% |
| GTTATTTAAGAAGACCTCAA+GGG | - | chr5_1:42722569-42722588 | Msa0731590:intron | 30.0% | |
| ! | AGTACCGGAACAAAATAATT+TGG | - | chr5_1:42722888-42722907 | Msa0731590:intron | 30.0% |
| !!! | TTTGGTCTAGTGTTTTTTTG+AGG | - | chr5_1:42722906-42722925 | Msa0731590:intron | 30.0% |
| !!! | TTGGTCTAGTGTTTTTTTGA+GGG | - | chr5_1:42722907-42722926 | Msa0731590:intron | 30.0% |
| ATGCAGAAACTAGTTGAATT+AGG | - | chr5_1:42723193-42723212 | Msa0731590:CDS | 30.0% | |
| GTAGCATATGCTCATAAAAA+TGG | - | chr5_1:42723326-42723345 | Msa0731590:intron | 30.0% | |
| TTCCCAAAGTAGAATTTAGA+AGG | + | chr5_1:42723415-42723434 | None:intergenic | 30.0% | |
| AACCTCCGTATCATTAATTA+TGG | - | chr5_1:42723625-42723644 | Msa0731590:intron | 30.0% | |
| GCTCACCATAATTAATGATA+CGG | + | chr5_1:42723633-42723652 | None:intergenic | 30.0% | |
| ! | GGATCAGTTTTCTCAATATT+AGG | - | chr5_1:42723692-42723711 | Msa0731590:intron | 30.0% |
| ! | TCAGTTTTCTCAATATTAGG+GGG | - | chr5_1:42723695-42723714 | Msa0731590:intron | 30.0% |
| TCATTTGCAATAATTCGACA+AGG | + | chr5_1:42723877-42723896 | None:intergenic | 30.0% | |
| !! | TTAGCTCATTTTCTTGTTTG+AGG | + | chr5_1:42723952-42723971 | None:intergenic | 30.0% |
| AGTTTATATATCCTCGTTTG+GGG | + | chr5_1:42723987-42724006 | None:intergenic | 30.0% | |
| TAATTCCAGAAGAACTAATC+AGG | - | chr5_1:42724038-42724057 | Msa0731590:intron | 30.0% | |
| TCATGAATGAAAGATCTCAA+TGG | - | chr5_1:42724094-42724113 | Msa0731590:intron | 30.0% | |
| ! | ATATGTGATTGGTGATAATG+AGG | - | chr5_1:42724176-42724195 | Msa0731590:intron | 30.0% |
| CTAAAAGACACCTTCATAAA+AGG | + | chr5_1:42724439-42724458 | None:intergenic | 30.0% | |
| TATGCAAATGAAATCCTTCA+GGG | + | chr5_1:42724750-42724769 | None:intergenic | 30.0% | |
| TTATGCAAATGAAATCCTTC+AGG | + | chr5_1:42724751-42724770 | None:intergenic | 30.0% | |
| !!! | GACATCATTTGTCGATTTTA+AGG | - | chr5_1:42724799-42724818 | Msa0731590:intron | 30.0% |
| !!! | TGATGTCACTTTTTGTTTTG+AGG | - | chr5_1:42725009-42725028 | Msa0731590:intron | 30.0% |
| TAAGGTACAAATCTTATGCT+TGG | + | chr5_1:42725195-42725214 | None:intergenic | 30.0% | |
| GTGATATTGTTCTTTCTCTA+AGG | + | chr5_1:42725213-42725232 | None:intergenic | 30.0% | |
| AAAATGCTAACACCACATAA+AGG | - | chr5_1:42725244-42725263 | Msa0731590:intron | 30.0% | |
| ! | ACTTCTTTGTTGTCTTTATG+AGG | - | chr5_1:42725478-42725497 | Msa0731590:intron | 30.0% |
| ! | CTTCTTTGTTGTCTTTATGA+GGG | - | chr5_1:42725479-42725498 | Msa0731590:intron | 30.0% |
| ! | TTCTTTGTTGTCTTTATGAG+GGG | - | chr5_1:42725480-42725499 | Msa0731590:intron | 30.0% |
| CTTACTAAGAAAAAACCCAA+TGG | + | chr5_1:42725642-42725661 | None:intergenic | 30.0% | |
| !!! | CATTGGGTTTTTTCTTAGTA+AGG | - | chr5_1:42725640-42725659 | Msa0731590:intron | 30.0% |
| GGTGGAACCTATTTAATAAT+AGG | - | chr5_1:42725783-42725802 | Msa0731590:intron | 30.0% | |
| ! | GGTTGGTCCTATTATTAAAT+AGG | + | chr5_1:42725793-42725812 | None:intergenic | 30.0% |
| AGACATAAAAAATAGGTGGT+TGG | + | chr5_1:42725810-42725829 | None:intergenic | 30.0% | |
| TTATAGGAGTTATATGAAGG+TGG | + | chr5_1:42725947-42725966 | None:intergenic | 30.0% | |
| CACTTATAGGAGTTATATGA+AGG | + | chr5_1:42725950-42725969 | None:intergenic | 30.0% | |
| !!! | TATGAGTTTCTTTTTTGTGG+TGG | + | chr5_1:42726297-42726316 | None:intergenic | 30.0% |
| GACATAAAATAAGAGAAGGA+GGG | + | chr5_1:42726423-42726442 | None:intergenic | 30.0% | |
| AGACATAAAATAAGAGAAGG+AGG | + | chr5_1:42726424-42726443 | None:intergenic | 30.0% | |
| ! | GATATACCCCCTTTAAAAAA+GGG | + | chr5_1:42726677-42726696 | None:intergenic | 30.0% |
| ! | AGATATACCCCCTTTAAAAA+AGG | + | chr5_1:42726678-42726697 | None:intergenic | 30.0% |
| TCTAGCAATAAATGCAAAGA+AGG | - | chr5_1:42726695-42726714 | Msa0731590:intron | 30.0% | |
| CTGAAGTCTAGTAAATGTTA+GGG | + | chr5_1:42726721-42726740 | None:intergenic | 30.0% | |
| !! | GAAGTGAAAATGAAAGTGTT+GGG | + | chr5_1:42726804-42726823 | None:intergenic | 30.0% |
| !! | AGCTCTTTGAGAACTTTTAT+AGG | - | chr5_1:42727094-42727113 | Msa0731590:intron | 30.0% |
| !! | TATTTCAAAGCATCGTGTTA+TGG | - | chr5_1:42727314-42727333 | Msa0731590:intron | 30.0% |
| TCTATAAAAGGTCATAGATC+AGG | + | chr5_1:42727474-42727493 | None:intergenic | 30.0% | |
| !! | TGTAAATATGTTTTCAGGCT+AGG | + | chr5_1:42727514-42727533 | None:intergenic | 30.0% |
| ! | AGGCTTGTAAATATGTTTTC+AGG | + | chr5_1:42727519-42727538 | None:intergenic | 30.0% |
| ! | TTACAGTGAAATGGACTTTA+AGG | + | chr5_1:42727601-42727620 | None:intergenic | 30.0% |
| TTAAAGTCCATTTCACTGTA+AGG | - | chr5_1:42727600-42727619 | Msa0731590:intron | 30.0% | |
| ATATAAGCCTTACAGTGAAA+TGG | + | chr5_1:42727610-42727629 | None:intergenic | 30.0% | |
| TTAAATAAACATGTCAGGTC+AGG | - | chr5_1:42727886-42727905 | Msa0731590:intron | 30.0% | |
| CAGTTTCATTGTATCAAGTA+GGG | + | chr5_1:42727949-42727968 | None:intergenic | 30.0% | |
| TCAGTTTCATTGTATCAAGT+AGG | + | chr5_1:42727950-42727969 | None:intergenic | 30.0% | |
| AATGAACGTCAAATTCAACA+TGG | + | chr5_1:42727986-42728005 | None:intergenic | 30.0% | |
| ! | TCCCTTGATACCTAAATTTT+AGG | - | chr5_1:42728034-42728053 | Msa0731590:intron | 30.0% |
| CCCTAAAATTTAGGTATCAA+GGG | + | chr5_1:42728038-42728057 | None:intergenic | 30.0% | |
| ! | CCCTTGATACCTAAATTTTA+GGG | - | chr5_1:42728035-42728054 | Msa0731590:intron | 30.0% |
| TCCCTAAAATTTAGGTATCA+AGG | + | chr5_1:42728039-42728058 | None:intergenic | 30.0% | |
| TGTTTGATGTTTGTGCATAT+AGG | - | chr5_1:42728097-42728116 | Msa0731590:intron | 30.0% | |
| !!! | AGTTTTGGTTGAGAAAAAAG+AGG | - | chr5_1:42728214-42728233 | Msa0731590:intron | 30.0% |
| TGAATGGTAAATATCATTGG+AGG | + | chr5_1:42728406-42728425 | None:intergenic | 30.0% | |
| !!! | TGAGATGTTCATGCTTTTTT+TGG | - | chr5_1:42728477-42728496 | Msa0731590:intron | 30.0% |
| !!! | TTTTTTGGTGTTGCATGTTT+TGG | - | chr5_1:42728500-42728519 | Msa0731590:intron | 30.0% |
| !! | TTGTGAGCCTTTGAAAATTT+TGG | + | chr5_1:42728738-42728757 | None:intergenic | 30.0% |
| ! | CAAAGCTGAAGTAAAAGTAT+TGG | + | chr5_1:42728784-42728803 | None:intergenic | 30.0% |
| !! | GTTTGGTTTGACATTGTTAT+TGG | - | chr5_1:42728966-42728985 | Msa0731590:intron | 30.0% |
| AAATATAGCGGTAATCTAGA+GGG | + | chr5_1:42729189-42729208 | None:intergenic | 30.0% | |
| ! | TGCCAAAATTTTCAGTTGAT+TGG | - | chr5_1:42729496-42729515 | Msa0731590:intron | 30.0% |
| ! | CACCAATCAACTGAAAATTT+TGG | + | chr5_1:42729501-42729520 | None:intergenic | 30.0% |
| GATTGGTGTAACAAGATATT+TGG | - | chr5_1:42729513-42729532 | Msa0731590:intron | 30.0% | |
| GTGTAACAAGATATTTGGTA+CGG | - | chr5_1:42729518-42729537 | Msa0731590:intron | 30.0% | |
| !! | ATTTATTTTCACAAACCTGC+CGG | + | chr5_1:42729592-42729611 | None:intergenic | 30.0% |
| CAAGATAAGTCTCAAAAAAC+GGG | + | chr5_1:42729701-42729720 | None:intergenic | 30.0% | |
| GATACTATTAAACAGCTTAG+AGG | - | chr5_1:42729749-42729768 | Msa0731590:intron | 30.0% | |
| CAAATGCGGTTCAAATATTA+AGG | + | chr5_1:42729843-42729862 | None:intergenic | 30.0% | |
| ATTCATGTTATAGCAAAGCA+AGG | - | chr5_1:42730244-42730263 | Msa0731590:intron | 30.0% | |
| TGGAGAATCACAATCAAATA+TGG | - | chr5_1:42730481-42730500 | Msa0731590:intron | 30.0% | |
| ! | CAACATTTCATAGTCTTGAA+TGG | + | chr5_1:42730679-42730698 | None:intergenic | 30.0% |
| CAAATGCTGTTAAATAGGTA+TGG | - | chr5_1:42730934-42730953 | Msa0731590:intron | 30.0% | |
| ! | GATAATTGTGCAGATGTTTT+AGG | - | chr5_1:42731141-42731160 | Msa0731590:intron | 30.0% |
| CTTGAGAAACAGATATGATT+TGG | + | chr5_1:42731240-42731259 | None:intergenic | 30.0% | |
| TAACTGAACTACGATTATTC+AGG | - | chr5_1:42731317-42731336 | Msa0731590:CDS | 30.0% | |
| TCAAGAGTTAAAGAGATTTC+AGG | - | chr5_1:42731420-42731439 | Msa0731590:CDS | 30.0% | |
| !! | CCACGAGTTTTTAGAAAAAT+CGG | - | chr5_1:42731449-42731468 | Msa0731590:CDS | 30.0% |
| !! | GTTGATTTTCCAAAATGCAA+TGG | - | chr5_1:42731543-42731562 | Msa0731590:CDS | 30.0% |
| TTCCAAAATGCAATGGAAAA+AGG | - | chr5_1:42731550-42731569 | Msa0731590:CDS | 30.0% | |
| ! | AATAATTTGTACACGGGCTA+TGG | - | chr5_1:42719811-42719830 | Msa0731590:three_prime_UTR | 35.0% |
| GTGTTAATATTGGGGATTCT+TGG | - | chr5_1:42720001-42720020 | Msa0731590:CDS | 35.0% | |
| TCCCAAAAAACTAATCTGTG+AGG | + | chr5_1:42720108-42720127 | None:intergenic | 35.0% | |
| !!! | ATTAGTTTTTTGGGAACCTG+TGG | - | chr5_1:42720113-42720132 | Msa0731590:intron | 35.0% |
| GACTTAATATTAGACACCAC+AGG | + | chr5_1:42720132-42720151 | None:intergenic | 35.0% | |
| !!! | AGTTCGATGGATTTTAGGTT+GGG | + | chr5_1:42720971-42720990 | None:intergenic | 35.0% |
| !! | TAGTTCGATGGATTTTAGGT+TGG | + | chr5_1:42720972-42720991 | None:intergenic | 35.0% |
| AAGTAGGGACTAAACTTACA+AGG | + | chr5_1:42721193-42721212 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTTCA+AGG | - | chr5_1:42721637-42721656 | Msa0731590:intron | 35.0% | |
| CTAACAGTGTTACATGATAG+GGG | + | chr5_1:42721727-42721746 | None:intergenic | 35.0% | |
| TGAAGCAAAGATGAATGGTA+GGG | + | chr5_1:42721794-42721813 | None:intergenic | 35.0% | |
| TTGAAGCAAAGATGAATGGT+AGG | + | chr5_1:42721795-42721814 | None:intergenic | 35.0% | |
| TTCGTTGAAGCAAAGATGAA+TGG | + | chr5_1:42721799-42721818 | None:intergenic | 35.0% | |
| GGAAATCTTAGAAGAAGAAG+AGG | - | chr5_1:42722233-42722252 | Msa0731590:intron | 35.0% | |
| AACATAGTGTGATCGATTGA+GGG | - | chr5_1:42722370-42722389 | Msa0731590:intron | 35.0% | |
| GCTAACAGTGTTACAATAGA+AGG | - | chr5_1:42722507-42722526 | Msa0731590:intron | 35.0% | |
| AAAAAATGATGATTGTGCCG+TGG | - | chr5_1:42722615-42722634 | Msa0731590:intron | 35.0% | |
| TGCGCCCTTTAACAAAAAAA+TGG | + | chr5_1:42722675-42722694 | None:intergenic | 35.0% | |
| !! | TTTTTGTTAAAGGGCGCAAA+AGG | - | chr5_1:42722677-42722696 | Msa0731590:intron | 35.0% |
| !!! | TGGTCTAGTGTTTTTTTGAG+GGG | - | chr5_1:42722908-42722927 | Msa0731590:intron | 35.0% |
| CTAGTTGAATTAGGTTATCC+CGG | - | chr5_1:42723202-42723221 | Msa0731590:CDS | 35.0% | |
| CACCATAATTAATGATACGG+AGG | + | chr5_1:42723630-42723649 | None:intergenic | 35.0% | |
| ATGGTGAGCCAACTTATTTA+CGG | - | chr5_1:42723644-42723663 | Msa0731590:intron | 35.0% | |
| ! | CAATTGATAATCAGCCTACT+GGG | + | chr5_1:42723670-42723689 | None:intergenic | 35.0% |
| ! | TCAATTGATAATCAGCCTAC+TGG | + | chr5_1:42723671-42723690 | None:intergenic | 35.0% |
| GTAGGCTGATTATCAATTGA+TGG | - | chr5_1:42723671-42723690 | Msa0731590:intron | 35.0% | |
| TCAGCTGCTTATTATCTTGA+GGG | + | chr5_1:42723798-42723817 | None:intergenic | 35.0% | |
| TTCAGCTGCTTATTATCTTG+AGG | + | chr5_1:42723799-42723818 | None:intergenic | 35.0% | |
| ! | ACAACTGCTATTTGAACTTC+AGG | + | chr5_1:42723830-42723849 | None:intergenic | 35.0% |
| AAGATCTCAATGGAATGAGA+TGG | - | chr5_1:42724104-42724123 | Msa0731590:intron | 35.0% | |
| !! | CATCAACGTTGACTTCATTT+CGG | + | chr5_1:42724132-42724151 | None:intergenic | 35.0% |
| ! | CAAAGCAAGTTTGATTTCAC+TGG | + | chr5_1:42724268-42724287 | None:intergenic | 35.0% |
| ! | CTAGAAGACACCTTTTATGA+AGG | - | chr5_1:42724426-42724445 | Msa0731590:intron | 35.0% |
| TATGTTCACCTGAAGTGAAT+AGG | - | chr5_1:42724545-42724564 | Msa0731590:intron | 35.0% | |
| GACATTTACCTATTCACTTC+AGG | + | chr5_1:42724556-42724575 | None:intergenic | 35.0% | |
| TAATTTGAGCCTTTCATGTG+CGG | + | chr5_1:42724669-42724688 | None:intergenic | 35.0% | |
| ! | TCTTTGTTGTCTTTATGAGG+GGG | - | chr5_1:42725481-42725500 | Msa0731590:intron | 35.0% |
| TGGGATAAAACCATGGTTAA+GGG | + | chr5_1:42725535-42725554 | None:intergenic | 35.0% | |
| ATGGGAAAAAATCTCAGTGA+AGG | + | chr5_1:42725623-42725642 | None:intergenic | 35.0% | |
| !!! | TCACTGAGATTTTTTCCCAT+TGG | - | chr5_1:42725623-42725642 | Msa0731590:intron | 35.0% |
| !!! | CACTGAGATTTTTTCCCATT+GGG | - | chr5_1:42725624-42725643 | Msa0731590:intron | 35.0% |
| TTAACTCCTTGAATGTCATC+AGG | + | chr5_1:42725682-42725701 | None:intergenic | 35.0% | |
| GGAAAAGAGATTAAATGGAG+AGG | + | chr5_1:42725708-42725727 | None:intergenic | 35.0% | |
| TATATGAAGGTGGAAGACTA+AGG | + | chr5_1:42725937-42725956 | None:intergenic | 35.0% | |
| AACTCCTATAAGTGAATGGA+TGG | - | chr5_1:42725956-42725975 | Msa0731590:intron | 35.0% | |
| CAAACCATCCATTCACTTAT+AGG | + | chr5_1:42725963-42725982 | None:intergenic | 35.0% | |
| ATAAGTGAATGGATGGTTTG+TGG | - | chr5_1:42725963-42725982 | Msa0731590:intron | 35.0% | |
| ACCATCTATAGCATAAACGT+AGG | - | chr5_1:42726196-42726215 | Msa0731590:intron | 35.0% | |
| TCCTACGTTTATGCTATAGA+TGG | + | chr5_1:42726200-42726219 | None:intergenic | 35.0% | |
| GACAATGCATGATATATGCA+AGG | - | chr5_1:42726252-42726271 | Msa0731590:intron | 35.0% | |
| AACTAAGTGCCCAAAAATTG+AGG | + | chr5_1:42726391-42726410 | None:intergenic | 35.0% | |
| TGAAAGATGTGAGATAAGAG+TGG | + | chr5_1:42726536-42726555 | None:intergenic | 35.0% | |
| ACATCTTTCATCACAATCCA+GGG | - | chr5_1:42726546-42726565 | Msa0731590:intron | 35.0% | |
| !!! | AGAGGGCCCAATTTTTTTTT+CGG | - | chr5_1:42726618-42726637 | Msa0731590:intron | 35.0% |
| CCCTTCCCGAAAAAAAAATT+GGG | + | chr5_1:42726627-42726646 | None:intergenic | 35.0% | |
| !!! | CCCAATTTTTTTTTCGGGAA+GGG | - | chr5_1:42726624-42726643 | Msa0731590:intron | 35.0% |
| !!! | CCAATTTTTTTTTCGGGAAG+GGG | - | chr5_1:42726625-42726644 | Msa0731590:intron | 35.0% |
| !!! | CAATTTTTTTTTCGGGAAGG+GGG | - | chr5_1:42726626-42726645 | Msa0731590:intron | 35.0% |
| GCTGAAGTCTAGTAAATGTT+AGG | + | chr5_1:42726722-42726741 | None:intergenic | 35.0% | |
| !!! | ACTCTTTTTTACAATCCAGC+AGG | - | chr5_1:42726757-42726776 | Msa0731590:intron | 35.0% |
| !! | AAAATGAAAGTGTTGGGTTG+GGG | + | chr5_1:42726798-42726817 | None:intergenic | 35.0% |
| !! | GAAAATGAAAGTGTTGGGTT+GGG | + | chr5_1:42726799-42726818 | None:intergenic | 35.0% |
| !! | TGAAAATGAAAGTGTTGGGT+TGG | + | chr5_1:42726800-42726819 | None:intergenic | 35.0% |
| ! | GGAAGTGAAAATGAAAGTGT+TGG | + | chr5_1:42726805-42726824 | None:intergenic | 35.0% |
| AATTCATGTTACAGGGTATG+AGG | - | chr5_1:42727023-42727042 | Msa0731590:intron | 35.0% | |
| ATTCATGTTACAGGGTATGA+GGG | - | chr5_1:42727024-42727043 | Msa0731590:intron | 35.0% | |
| ! | ATCGTTTCACTAAGCTTTGT+TGG | - | chr5_1:42727180-42727199 | Msa0731590:intron | 35.0% |
| !! | TCGTTTCACTAAGCTTTGTT+GGG | - | chr5_1:42727181-42727200 | Msa0731590:intron | 35.0% |
| ! | GCATTTGAGACACGATATTT+CGG | - | chr5_1:42727274-42727293 | Msa0731590:intron | 35.0% |
| AAAAAGATGTAGGAACCAAG+GGG | + | chr5_1:42727354-42727373 | None:intergenic | 35.0% | |
| GAAAAAGATGTAGGAACCAA+GGG | + | chr5_1:42727355-42727374 | None:intergenic | 35.0% | |
| ! | CTTGGTTCCTACATCTTTTT+CGG | - | chr5_1:42727354-42727373 | Msa0731590:intron | 35.0% |
| TTGTTGTCCGAAAAAGATGT+AGG | + | chr5_1:42727364-42727383 | None:intergenic | 35.0% | |
| ACAACACATATCTTGAGAGT+AGG | - | chr5_1:42727380-42727399 | Msa0731590:intron | 35.0% | |
| CAACACATATCTTGAGAGTA+GGG | - | chr5_1:42727381-42727400 | Msa0731590:intron | 35.0% | |
| !!! | AGGCATGCAAATTTTTTCGT+AGG | + | chr5_1:42727454-42727473 | None:intergenic | 35.0% |
| ! | GCTAGGCCATACTTTTAAAT+AGG | + | chr5_1:42727497-42727516 | None:intergenic | 35.0% |
| AATAAACAAGTCGGTCTATC+AGG | - | chr5_1:42727773-42727792 | Msa0731590:intron | 35.0% | |
| TAGGAAATTGCTCGATTATC+AGG | - | chr5_1:42728116-42728135 | Msa0731590:intron | 35.0% | |
| ! | TTATCAGGTCTATTTGCTGA+TGG | - | chr5_1:42728131-42728150 | Msa0731590:intron | 35.0% |
| ! | ACAGAGAGCATACCATTATT+TGG | + | chr5_1:42728254-42728273 | None:intergenic | 35.0% |
| !! | TATAACTTCGTTTTCGAGGA+TGG | - | chr5_1:42728280-42728299 | Msa0731590:intron | 35.0% |
| !! | ATAACTTCGTTTTCGAGGAT+GGG | - | chr5_1:42728281-42728300 | Msa0731590:intron | 35.0% |
| TATCTATGTCCCACTATGTT+TGG | - | chr5_1:42728315-42728334 | Msa0731590:intron | 35.0% | |
| ATCATTGGAGGATCAAAAGT+AGG | + | chr5_1:42728394-42728413 | None:intergenic | 35.0% | |
| !! | AGTATTGGTCACAAAGAAGA+GGG | + | chr5_1:42728769-42728788 | None:intergenic | 35.0% |
| !! | AAGTATTGGTCACAAAGAAG+AGG | + | chr5_1:42728770-42728789 | None:intergenic | 35.0% |
| !! | TGACATTGTTATTGGTTTCG+TGG | - | chr5_1:42728974-42728993 | Msa0731590:intron | 35.0% |
| AATATAGCGGTAATCTAGAG+GGG | + | chr5_1:42729188-42729207 | None:intergenic | 35.0% | |
| CAAATATAGCGGTAATCTAG+AGG | + | chr5_1:42729190-42729209 | None:intergenic | 35.0% | |
| CAAACAACTCTAATCAGCTT+AGG | + | chr5_1:42729391-42729410 | None:intergenic | 35.0% | |
| ! | TTTTGGCATGTTGTCATACA+CGG | + | chr5_1:42729484-42729503 | None:intergenic | 35.0% |
| TCTCAAAAAACGGGACTTAA+AGG | + | chr5_1:42729692-42729711 | None:intergenic | 35.0% | |
| ! | TACATTTTCCGAGTCTAGTT+TGG | - | chr5_1:42729899-42729918 | Msa0731590:intron | 35.0% |
| AGTTCATTCCAAACTAGACT+CGG | + | chr5_1:42729910-42729929 | None:intergenic | 35.0% | |
| ! | CTTCAAGGCATCAAAATTCA+TGG | - | chr5_1:42730083-42730102 | Msa0731590:intron | 35.0% |
| ACAATCAAATATGGCTGATG+TGG | - | chr5_1:42730490-42730509 | Msa0731590:intron | 35.0% | |
| ACATCAAAACCTTGATGTAG+CGG | - | chr5_1:42730543-42730562 | Msa0731590:intron | 35.0% | |
| ! | ATGTTGATAAGAGAAAAGCC+AGG | - | chr5_1:42730693-42730712 | Msa0731590:intron | 35.0% |
| ! | TGTTGATAAGAGAAAAGCCA+GGG | - | chr5_1:42730694-42730713 | Msa0731590:intron | 35.0% |
| AAACTATATTGTGCCTTACC+AGG | + | chr5_1:42730861-42730880 | None:intergenic | 35.0% | |
| CCTTGAGGAAATTAACAGAT+GGG | + | chr5_1:42731033-42731052 | None:intergenic | 35.0% | |
| ACCTTGAGGAAATTAACAGA+TGG | + | chr5_1:42731034-42731053 | None:intergenic | 35.0% | |
| TCTGTTAATTTCCTCAAGGT+TGG | - | chr5_1:42731034-42731053 | Msa0731590:intron | 35.0% | |
| GTTTAATTGGTATGCACAGT+CGG | - | chr5_1:42731070-42731089 | Msa0731590:intron | 35.0% | |
| CTGCACAATTATCTTCTACA+TGG | + | chr5_1:42731134-42731153 | None:intergenic | 35.0% | |
| !! | CCGATTTTTCTAAAAACTCG+TGG | + | chr5_1:42731452-42731471 | None:intergenic | 35.0% |
| ! | GACCTTTTTCCATTGCATTT+TGG | + | chr5_1:42731555-42731574 | None:intergenic | 35.0% |
| GCTGATGATACACTACTTCT+TGG | - | chr5_1:42719877-42719896 | Msa0731590:exon | 40.0% | |
| TACTTCTTGGAGAAAAGAGC+TGG | - | chr5_1:42719890-42719909 | Msa0731590:CDS | 40.0% | |
| ACTTCTTGGAGAAAAGAGCT+GGG | - | chr5_1:42719891-42719910 | Msa0731590:CDS | 40.0% | |
| GGCGGTCTTGAATTTATTTG+CGG | - | chr5_1:42719933-42719952 | Msa0731590:CDS | 40.0% | |
| GACAAGCCAAGATACACAAA+CGG | + | chr5_1:42720072-42720091 | None:intergenic | 40.0% | |
| !! | GTGTATCTTGGCTTGTCAAT+TGG | - | chr5_1:42720075-42720094 | Msa0731590:intron | 40.0% |
| !! | TATCTTGGCTTGTCAATTGG+AGG | - | chr5_1:42720078-42720097 | Msa0731590:intron | 40.0% |
| !! | ACAGTCGATTCCTGTCTTTT+GGG | - | chr5_1:42720169-42720188 | Msa0731590:intron | 40.0% |
| AATTACACTTACCTCCCTTG+AGG | - | chr5_1:42721066-42721085 | Msa0731590:intron | 40.0% | |
| ATTTAAGAAGACCTCAAGGG+AGG | + | chr5_1:42722572-42722591 | None:intergenic | 40.0% | |
| AAGCAAAGATGAATGGTAGG+GGG | + | chr5_1:42721792-42721811 | None:intergenic | 40.0% | |
| GAAGCAAAGATGAATGGTAG+GGG | + | chr5_1:42721793-42721812 | None:intergenic | 40.0% | |
| ACTTCACGCCTCAAAAGTTA+AGG | + | chr5_1:42721977-42721996 | None:intergenic | 40.0% | |
| ! | AAGAAGAGGGTGTGAATTGA+AGG | - | chr5_1:42722247-42722266 | Msa0731590:intron | 40.0% |
| GAACATAGTGTGATCGATTG+AGG | - | chr5_1:42722369-42722388 | Msa0731590:intron | 40.0% | |
| ! | AATTTTGCTACCACTACCTG+GGG | + | chr5_1:42722456-42722475 | None:intergenic | 40.0% |
| ! | CAATTTTGCTACCACTACCT+GGG | + | chr5_1:42722457-42722476 | None:intergenic | 40.0% |
| ACAGTGTTACAATAGAAGGG+AGG | - | chr5_1:42722511-42722530 | Msa0731590:intron | 40.0% | |
| ATTTAAGAAGACCTCAAGGG+AGG | - | chr5_1:42722572-42722591 | Msa0731590:intron | 40.0% | |
| AAATTTATCGTTGGCAAGGC+CGG | - | chr5_1:42723146-42723165 | Msa0731590:CDS | 40.0% | |
| ! | TAAATCTGGGATAACCCAAC+CGG | + | chr5_1:42723168-42723187 | None:intergenic | 40.0% |
| TTGAATTAGGTTATCCCGGT+TGG | - | chr5_1:42723206-42723225 | Msa0731590:CDS | 40.0% | |
| TGAATTAGGTTATCCCGGTT+GGG | - | chr5_1:42723207-42723226 | Msa0731590:CDS | 40.0% | |
| TTAGTTGAGAAAACCCAACC+GGG | + | chr5_1:42723223-42723242 | None:intergenic | 40.0% | |
| CTTAGTTGAGAAAACCCAAC+CGG | + | chr5_1:42723224-42723243 | None:intergenic | 40.0% | |
| ! | GTTGGGTTTTCTCAACTAAG+TGG | - | chr5_1:42723224-42723243 | Msa0731590:CDS | 40.0% |
| !! | TGGTAACTTGTTCGCTTGAT+GGG | + | chr5_1:42723462-42723481 | None:intergenic | 40.0% |
| !! | ATGGTAACTTGTTCGCTTGA+TGG | + | chr5_1:42723463-42723482 | None:intergenic | 40.0% |
| TTAAGGGGAGGACTTACATA+TGG | + | chr5_1:42723482-42723501 | None:intergenic | 40.0% | |
| ! | AGGTACCTGATTAGTTCTTC+TGG | + | chr5_1:42724046-42724065 | None:intergenic | 40.0% |
| ! | ATGTCACTTGATGCGAGTAA+AGG | - | chr5_1:42725041-42725060 | Msa0731590:intron | 40.0% |
| CTAACACCACATAAAGGAAG+TGG | - | chr5_1:42725250-42725269 | Msa0731590:intron | 40.0% | |
| CATTCTCCACTTCCTTTATG+TGG | + | chr5_1:42725259-42725278 | None:intergenic | 40.0% | |
| ! | CACTCTTTTTCCCTTAACCA+TGG | - | chr5_1:42725522-42725541 | Msa0731590:intron | 40.0% |
| GTGGGATAAAACCATGGTTA+AGG | + | chr5_1:42725536-42725555 | None:intergenic | 40.0% | |
| !!! | AACCATGGTTTTATCCCACT+AGG | - | chr5_1:42725537-42725556 | Msa0731590:intron | 40.0% |
| AACCTAGTGGGATAAAACCA+TGG | + | chr5_1:42725542-42725561 | None:intergenic | 40.0% | |
| ! | TTTATCCCACTAGGTTTTCC+TGG | - | chr5_1:42725546-42725565 | Msa0731590:intron | 40.0% |
| !!! | TCCTGGTATGGTTTTGAATG+AGG | - | chr5_1:42725563-42725582 | Msa0731590:intron | 40.0% |
| GCATATCCTGATGACATTCA+AGG | - | chr5_1:42725673-42725692 | Msa0731590:intron | 40.0% | |
| TTGAGCTTAGCTCAGTTGAT+AGG | - | chr5_1:42726229-42726248 | Msa0731590:intron | 40.0% | |
| ! | TGAGCTTAGCTCAGTTGATA+GGG | - | chr5_1:42726230-42726249 | Msa0731590:intron | 40.0% |
| TGCATGATATATGCAAGGTC+TGG | - | chr5_1:42726257-42726276 | Msa0731590:intron | 40.0% | |
| GCATGATATATGCAAGGTCT+GGG | - | chr5_1:42726258-42726277 | Msa0731590:intron | 40.0% | |
| CATGATATATGCAAGGTCTG+GGG | - | chr5_1:42726259-42726278 | Msa0731590:intron | 40.0% | |
| !!! | AGTTTCTTTTTTGTGGTGGC+CGG | + | chr5_1:42726293-42726312 | None:intergenic | 40.0% |
| TAAGAGAAGGAGGGCAAAAT+TGG | + | chr5_1:42726414-42726433 | None:intergenic | 40.0% | |
| AGATGTGAGATAAGAGTGGT+AGG | + | chr5_1:42726532-42726551 | None:intergenic | 40.0% | |
| CACATCTTTCATCACAATCC+AGG | - | chr5_1:42726545-42726564 | Msa0731590:intron | 40.0% | |
| AAAAAAATTGGGCCCTCTAC+AGG | + | chr5_1:42726616-42726635 | None:intergenic | 40.0% | |
| !!! | GAGGGCCCAATTTTTTTTTC+GGG | - | chr5_1:42726619-42726638 | Msa0731590:intron | 40.0% |
| !!! | GCCCAATTTTTTTTTCGGGA+AGG | - | chr5_1:42726623-42726642 | Msa0731590:intron | 40.0% |
| CCCCTTCCCGAAAAAAAAAT+TGG | + | chr5_1:42726628-42726647 | None:intergenic | 40.0% | |
| GTGTGAAAATGAAATCCTGC+TGG | + | chr5_1:42726775-42726794 | None:intergenic | 40.0% | |
| !! | AAATGAAAGTGTTGGGTTGG+GGG | + | chr5_1:42726797-42726816 | None:intergenic | 40.0% |
| !! | TCACTAAGCTTTGTTGGGTT+TGG | - | chr5_1:42727186-42727205 | Msa0731590:intron | 40.0% |
| !! | AAGCTTTGTTGGGTTTGGTT+CGG | - | chr5_1:42727191-42727210 | Msa0731590:intron | 40.0% |
| AAAAGATGTAGGAACCAAGG+GGG | + | chr5_1:42727353-42727372 | None:intergenic | 40.0% | |
| CGAAAAAGATGTAGGAACCA+AGG | + | chr5_1:42727356-42727375 | None:intergenic | 40.0% | |
| ! | TTGAGAGTAGGGTTTAGAGT+AGG | - | chr5_1:42727392-42727411 | Msa0731590:intron | 40.0% |
| ! | GAGGCAGCCAAAATTTTCAA+AGG | - | chr5_1:42728728-42728747 | Msa0731590:intron | 40.0% |
| TATTGGTCACAAAGAAGAGG+GGG | + | chr5_1:42728767-42728786 | None:intergenic | 40.0% | |
| ! | GTATTGGTCACAAAGAAGAG+GGG | + | chr5_1:42728768-42728787 | None:intergenic | 40.0% |
| ATATAGCGGTAATCTAGAGG+GGG | + | chr5_1:42729187-42729206 | None:intergenic | 40.0% | |
| !! | AGTGCTTACCTGTTGATGAT+AGG | - | chr5_1:42729546-42729565 | Msa0731590:intron | 40.0% |
| GAGAGGTAAATGCAGTGTTA+AGG | - | chr5_1:42730016-42730035 | Msa0731590:intron | 40.0% | |
| TCTAGCTGATGTTACTGCTT+TGG | + | chr5_1:42730046-42730065 | None:intergenic | 40.0% | |
| GTAACATCAGCTAGAATGAG+TGG | - | chr5_1:42730051-42730070 | Msa0731590:intron | 40.0% | |
| GAGTGGAAACTTACTCTTCA+AGG | - | chr5_1:42730068-42730087 | Msa0731590:intron | 40.0% | |
| GCATGTGCAGTATACAATGA+AGG | - | chr5_1:42730108-42730127 | Msa0731590:intron | 40.0% | |
| CATAACAGAACTGAGTTGTG+TGG | + | chr5_1:42730147-42730166 | None:intergenic | 40.0% | |
| GTTATAGCAAAGCAAGGCTA+AGG | - | chr5_1:42730250-42730269 | Msa0731590:intron | 40.0% | |
| CATGTGTTAGTGTTCAGTGT+AGG | + | chr5_1:42730418-42730437 | None:intergenic | 40.0% | |
| TTGTGATTCTCCACGTTTGA+AGG | + | chr5_1:42730474-42730493 | None:intergenic | 40.0% | |
| TGTTCATGTAGTTGGAACGA+TGG | - | chr5_1:42730646-42730665 | Msa0731590:intron | 40.0% | |
| GTTCATGTAGTTGGAACGAT+GGG | - | chr5_1:42730647-42730666 | Msa0731590:intron | 40.0% | |
| ! | GTTGATAAGAGAAAAGCCAG+GGG | - | chr5_1:42730695-42730714 | Msa0731590:intron | 40.0% |
| GCTACGTGGTGAAGATATTA+AGG | - | chr5_1:42730767-42730786 | Msa0731590:intron | 40.0% | |
| TGTTGTGCTCTTCAGTAACA+AGG | - | chr5_1:42730958-42730977 | Msa0731590:intron | 40.0% | |
| GTTGTGCTCTTCAGTAACAA+GGG | - | chr5_1:42730959-42730978 | Msa0731590:intron | 40.0% | |
| CCCATCTGTTAATTTCCTCA+AGG | - | chr5_1:42731030-42731049 | Msa0731590:intron | 40.0% | |
| ! | CCTTCTGATTTTGCCAAGTA+GGG | + | chr5_1:42731360-42731379 | None:intergenic | 40.0% |
| ! | ACCTTCTGATTTTGCCAAGT+AGG | + | chr5_1:42731361-42731380 | None:intergenic | 40.0% |
| TTAAGTCTAGACTTTCGGGG+TGG | - | chr5_1:42720145-42720164 | Msa0731590:intron | 45.0% | |
| !! | CACAGTCGATTCCTGTCTTT+TGG | - | chr5_1:42720168-42720187 | Msa0731590:intron | 45.0% |
| !! | CAGTCGATTCCTGTCTTTTG+GGG | - | chr5_1:42720170-42720189 | Msa0731590:intron | 45.0% |
| !! | AGTCGATTCCTGTCTTTTGG+GGG | - | chr5_1:42720171-42720190 | Msa0731590:intron | 45.0% |
| ACAGTGTTACATGATAGGGG+AGG | + | chr5_1:42721724-42721743 | None:intergenic | 45.0% | |
| !!! | GGTAGGGGGAGTAGTTTTTT+CGG | + | chr5_1:42721778-42721797 | None:intergenic | 45.0% |
| ! | AGAGGGTGTGAATTGAAGGA+AGG | - | chr5_1:42722251-42722270 | Msa0731590:intron | 45.0% |
| ! | CCAATTTTGCTACCACTACC+TGG | + | chr5_1:42722458-42722477 | None:intergenic | 45.0% |
| ! | CCAGGTAGTGGTAGCAAAAT+TGG | - | chr5_1:42722455-42722474 | Msa0731590:intron | 45.0% |
| AATTACACTCACCTCCCTTG+AGG | + | chr5_1:42722586-42722605 | None:intergenic | 45.0% | |
| ! | TTGTTAAAGGGCGCAAAAGG+TGG | - | chr5_1:42722680-42722699 | Msa0731590:intron | 45.0% |
| ! | TGTTAAAGGGCGCAAAAGGT+GGG | - | chr5_1:42722681-42722700 | Msa0731590:intron | 45.0% |
| !!! | TGTTTTTTTGAGGGGACCTG+TGG | - | chr5_1:42722916-42722935 | Msa0731590:intron | 45.0% |
| CCAACTCATAACTACACCAC+AGG | + | chr5_1:42722935-42722954 | None:intergenic | 45.0% | |
| CCTGTGGTGTAGTTATGAGT+TGG | - | chr5_1:42722932-42722951 | Msa0731590:intron | 45.0% | |
| CTACTGGGCCGTAAATAAGT+TGG | + | chr5_1:42723655-42723674 | None:intergenic | 45.0% | |
| CAACTTATTTACGGCCCAGT+AGG | - | chr5_1:42723653-42723672 | Msa0731590:intron | 45.0% | |
| TCTCAACTGCACATGAAGTG+TGG | - | chr5_1:42723898-42723917 | Msa0731590:intron | 45.0% | |
| AGGATAGATAACCCCAAACG+AGG | - | chr5_1:42723973-42723992 | Msa0731590:intron | 45.0% | |
| TAAGTTCAGCCGCACATGAA+AGG | - | chr5_1:42724657-42724676 | Msa0731590:intron | 45.0% | |
| TGACATATGAAGCTCCCTGA+AGG | - | chr5_1:42724733-42724752 | Msa0731590:intron | 45.0% | |
| ! | TAGCTCAAGAGTCGCTGATT+TGG | - | chr5_1:42725370-42725389 | Msa0731590:intron | 45.0% |
| !! | CGCTGATTTGGAGAAGAGTA+TGG | - | chr5_1:42725382-42725401 | Msa0731590:intron | 45.0% |
| CCATACCAGGAAAACCTAGT+GGG | + | chr5_1:42725554-42725573 | None:intergenic | 45.0% | |
| ACCATACCAGGAAAACCTAG+TGG | + | chr5_1:42725555-42725574 | None:intergenic | 45.0% | |
| GCCTCATTCAAAACCATACC+AGG | + | chr5_1:42725567-42725586 | None:intergenic | 45.0% | |
| AGGATCTCAACCCACATTCA+AGG | - | chr5_1:42725874-42725893 | Msa0731590:intron | 45.0% | |
| GGATCTCAACCCACATTCAA+GGG | - | chr5_1:42725875-42725894 | Msa0731590:intron | 45.0% | |
| GATCTCAACCCACATTCAAG+GGG | - | chr5_1:42725876-42725895 | Msa0731590:intron | 45.0% | |
| ATCTCAACCCACATTCAAGG+GGG | - | chr5_1:42725877-42725896 | Msa0731590:intron | 45.0% | |
| TAACACTCCCCCTTGAATGT+GGG | + | chr5_1:42725887-42725906 | None:intergenic | 45.0% | |
| ATAACACTCCCCCTTGAATG+TGG | + | chr5_1:42725888-42725907 | None:intergenic | 45.0% | |
| !!! | TTTCTTTTTTGTGGTGGCCG+GGG | + | chr5_1:42726291-42726310 | None:intergenic | 45.0% |
| !!! | GTTTCTTTTTTGTGGTGGCC+GGG | + | chr5_1:42726292-42726311 | None:intergenic | 45.0% |
| CTTTCATCACAATCCAGGGT+CGG | - | chr5_1:42726550-42726569 | Msa0731590:intron | 45.0% | |
| GACACGATATTTCGGAGTGT+CGG | - | chr5_1:42727282-42727301 | Msa0731590:intron | 45.0% | |
| !! | TTTCGGAGTGTCGGTATAGT+TGG | - | chr5_1:42727291-42727310 | Msa0731590:intron | 45.0% |
| ! | AAGTCAGACCAGGCTTTGAT+AGG | - | chr5_1:42727417-42727436 | Msa0731590:intron | 45.0% |
| GTCGGTCTATCAGGATTTGT+AGG | - | chr5_1:42727782-42727801 | Msa0731590:intron | 45.0% | |
| AGTAGGGTTGCGAATAAGTC+AGG | + | chr5_1:42727933-42727952 | None:intergenic | 45.0% | |
| GTATCAAGGGAGCAAAGTCA+TGG | + | chr5_1:42728025-42728044 | None:intergenic | 45.0% | |
| TATAGCGGTAATCTAGAGGG+GGG | + | chr5_1:42729186-42729205 | None:intergenic | 45.0% | |
| !! | GCACTGGTTTACTTAGCATC+CGG | - | chr5_1:42729570-42729589 | Msa0731590:intron | 45.0% |
| TTCGCCATTGGCATGCAATA+TGG | - | chr5_1:42729651-42729670 | Msa0731590:intron | 45.0% | |
| ACCACCATATTGCATGCCAA+TGG | + | chr5_1:42729658-42729677 | None:intergenic | 45.0% | |
| GTAGACCACATCTTGTGATG+TGG | - | chr5_1:42729817-42729836 | Msa0731590:intron | 45.0% | |
| TAAGGCCACATCACAAGATG+TGG | + | chr5_1:42729825-42729844 | None:intergenic | 45.0% | |
| GAACCGCATTTGCATCACAA+CGG | - | chr5_1:42729851-42729870 | Msa0731590:intron | 45.0% | |
| ACACCGTTGTGATGCAAATG+CGG | + | chr5_1:42729857-42729876 | None:intergenic | 45.0% | |
| AGTTGATCCAAGCAACAGAG+AGG | - | chr5_1:42729999-42730018 | Msa0731590:intron | 45.0% | |
| GCATTTACCTCTCTGTTGCT+TGG | + | chr5_1:42730009-42730028 | None:intergenic | 45.0% | |
| ! | CAGCATGTCGTTCTAAGCTA+GGG | - | chr5_1:42730175-42730194 | Msa0731590:intron | 45.0% |
| ATAGCAAAGCAAGGCTAAGG+AGG | - | chr5_1:42730253-42730272 | Msa0731590:intron | 45.0% | |
| TAGCAAAGCAAGGCTAAGGA+GGG | - | chr5_1:42730254-42730273 | Msa0731590:intron | 45.0% | |
| ! | GAGGGCATATTGTAATGCCA+AGG | - | chr5_1:42730272-42730291 | Msa0731590:intron | 45.0% |
| CAATCTGAACCGCTACATCA+AGG | + | chr5_1:42730555-42730574 | None:intergenic | 45.0% | |
| AGACATTACGTAACCTCACC+TGG | - | chr5_1:42730840-42730859 | Msa0731590:intron | 45.0% | |
| TTACGTAACCTCACCTGGTA+AGG | - | chr5_1:42730845-42730864 | Msa0731590:intron | 45.0% | |
| ATATTGTGCCTTACCAGGTG+AGG | + | chr5_1:42730856-42730875 | None:intergenic | 45.0% | |
| !! | AACACACAAGCAAGTGTCGA+TGG | - | chr5_1:42730982-42731001 | Msa0731590:intron | 45.0% |
| AACAGATGGGAATCTCTTGC+TGG | + | chr5_1:42731020-42731039 | None:intergenic | 45.0% | |
| GATTGAAGACCATCCCTACT+TGG | - | chr5_1:42731344-42731363 | Msa0731590:CDS | 45.0% | |
| ! | CTGATTTTGCCAAGTAGGGA+TGG | + | chr5_1:42731356-42731375 | None:intergenic | 45.0% |
| CCCTACTTGGCAAAATCAGA+AGG | - | chr5_1:42731357-42731376 | Msa0731590:CDS | 45.0% | |
| !!! | ATTATATGTTTTATATTTAA+GGG | + | chr5_1:42720240-42720259 | None:intergenic | 5.0% |
| !!! | AATTATATGTTTTATATTTA+AGG | + | chr5_1:42720241-42720260 | None:intergenic | 5.0% |
| !!! | TTTAATGATTAATTTTTTTT+AGG | - | chr5_1:42720295-42720314 | Msa0731590:intron | 5.0% |
| !!! | TTAATGATTAATTTTTTTTA+GGG | - | chr5_1:42720296-42720315 | Msa0731590:intron | 5.0% |
| !!! | TTTAATGATTAATTTTTTTT+AGG | - | chr5_1:42720295-42720314 | Msa0731590:intron | 5.0% |
| !!! | TTAATGATTAATTTTTTTTA+GGG | - | chr5_1:42720296-42720315 | Msa0731590:intron | 5.0% |
| !!! | TTTAATGATTTATTTTTTTT+AGG | - | chr5_1:42720465-42720484 | Msa0731590:intron | 5.0% |
| !!! | TTAATGATTTATTTTTTTTA+GGG | - | chr5_1:42720466-42720485 | Msa0731590:intron | 5.0% |
| !!! | TTTTTTTCTTAATATTTTTT+TGG | - | chr5_1:42720571-42720590 | Msa0731590:CDS | 5.0% |
| !! | AATTTCTTAATTAAAAAAAA+GGG | - | chr5_1:42721041-42721060 | Msa0731590:intron | 5.0% |
| !!! | TATAAGTAAATTTTTTTTTA+TGG | - | chr5_1:42721591-42721610 | Msa0731590:intron | 5.0% |
| !!! | ATAAGTAAATTTTTTTTTAT+GGG | - | chr5_1:42721592-42721611 | Msa0731590:intron | 5.0% |
| !! | GATAATATTTAAAAAAAATA+TGG | - | chr5_1:42721882-42721901 | Msa0731590:CDS | 5.0% |
| !! | TAAAATAAATTACAAATTAA+GGG | + | chr5_1:42723498-42723517 | None:intergenic | 5.0% |
| !! | ATAAAATAAATTACAAATTA+AGG | + | chr5_1:42723499-42723518 | None:intergenic | 5.0% |
| !! | ATATTGAAAATAATTAATAA+TGG | - | chr5_1:42725762-42725781 | Msa0731590:intron | 5.0% |
| !! | CAAAATAAAATAAAAATATT+TGG | + | chr5_1:42726920-42726939 | None:intergenic | 5.0% |
| !!! | AATATTTTTATTTTATTTTG+AGG | - | chr5_1:42726920-42726939 | Msa0731590:intron | 5.0% |
| !!! | AATTGTATTTTATAATATTA+TGG | - | chr5_1:42727047-42727066 | Msa0731590:intron | 5.0% |
| !! | AAAAATAAAAATAAAATAGA+CGG | + | chr5_1:42727218-42727237 | None:intergenic | 5.0% |
| ! | TTTGTACACGGGCTATGGAG+TGG | - | chr5_1:42719816-42719835 | Msa0731590:three_prime_UTR | 50.0% |
| ! | TTGTACACGGGCTATGGAGT+GGG | - | chr5_1:42719817-42719836 | Msa0731590:three_prime_UTR | 50.0% |
| GCTATGGAGTGGGAACATCA+AGG | - | chr5_1:42719827-42719846 | Msa0731590:three_prime_UTR | 50.0% | |
| TGGAGTGGGAACATCAAGGT+CGG | - | chr5_1:42719831-42719850 | Msa0731590:three_prime_UTR | 50.0% | |
| !! | TGCGGAAATGTCTGGCCTTA+AGG | - | chr5_1:42719951-42719970 | Msa0731590:CDS | 50.0% |
| ATCAGTGAGTTAACCACCCC+AGG | - | chr5_1:42722437-42722456 | Msa0731590:intron | 50.0% | |
| ! | CCCACTAGGTTTTCCTGGTA+TGG | - | chr5_1:42725551-42725570 | Msa0731590:intron | 50.0% |
| AGAGTAGGTCAAGTCAGACC+AGG | - | chr5_1:42727407-42727426 | Msa0731590:intron | 50.0% | |
| GACTCAAGCCTATCAAAGCC+TGG | + | chr5_1:42727428-42727447 | None:intergenic | 50.0% | |
| ! | GGCTTTGATAGGCTTGAGTC+TGG | - | chr5_1:42727428-42727447 | Msa0731590:intron | 50.0% |
| ! | GTCAGGTTGTAAGCCCATCT+AGG | - | chr5_1:42727903-42727922 | Msa0731590:intron | 50.0% |
| ! | AAGCGTTGCTGAAGCTCGTA+AGG | - | chr5_1:42729442-42729461 | Msa0731590:intron | 50.0% |
| ! | GAAGCTCGTAAGGTACCAAG+AGG | - | chr5_1:42729452-42729471 | Msa0731590:intron | 50.0% |
| CATACACGGCATATGCCTCT+TGG | + | chr5_1:42729470-42729489 | None:intergenic | 50.0% | |
| TGGTTTACTTAGCATCCGGC+AGG | - | chr5_1:42729574-42729593 | Msa0731590:intron | 50.0% | |
| GCCATTGGCATGCAATATGG+TGG | - | chr5_1:42729654-42729673 | Msa0731590:intron | 50.0% | |
| ! | GCAGCATGTCGTTCTAAGCT+AGG | - | chr5_1:42730174-42730193 | Msa0731590:intron | 50.0% |
| TGACACAACACTGGCACATG+TGG | + | chr5_1:42730391-42730410 | None:intergenic | 50.0% | |
| GTAGGACACTGACACAACAC+TGG | + | chr5_1:42730400-42730419 | None:intergenic | 50.0% | |
| ACCAAACACGCCTTCAAACG+TGG | - | chr5_1:42730461-42730480 | Msa0731590:intron | 50.0% | |
| ! | TCCACGTTTGAAGGCGTGTT+TGG | + | chr5_1:42730465-42730484 | None:intergenic | 50.0% |
| GTCCCAACGCAGTCACATTA+CGG | - | chr5_1:42730512-42730531 | Msa0731590:intron | 50.0% | |
| GACCGTAATGTGACTGCGTT+GGG | + | chr5_1:42730517-42730536 | None:intergenic | 50.0% | |
| TGACCGTAATGTGACTGCGT+TGG | + | chr5_1:42730518-42730537 | None:intergenic | 50.0% | |
| AAAGCCAGGGGATGAAGAAG+TGG | - | chr5_1:42730707-42730726 | Msa0731590:intron | 50.0% | |
| AGGGGATGAAGAAGTGGCAA+GGG | - | chr5_1:42730713-42730732 | Msa0731590:intron | 50.0% | |
| !! | AGTGGCAAGGGCTTTGTTTG+AGG | - | chr5_1:42730725-42730744 | Msa0731590:intron | 50.0% |
| !! | CAAGGGCTTTGTTTGAGGCT+CGG | - | chr5_1:42730730-42730749 | Msa0731590:intron | 50.0% |
| CTCCAACTCAAGATGCTACG+TGG | - | chr5_1:42730753-42730772 | Msa0731590:intron | 50.0% | |
| CACCACGTAGCATCTTGAGT+TGG | + | chr5_1:42730758-42730777 | None:intergenic | 50.0% | |
| GACGCACGTGTGAATCGTTT+CGG | - | chr5_1:42731202-42731221 | Msa0731590:CDS | 50.0% | |
| GGGAACATCAAGGTCGGTTG+TGG | - | chr5_1:42719837-42719856 | Msa0731590:three_prime_UTR | 55.0% | |
| GGGCCAATGTCCGAGCATTA+CGG | - | chr5_1:42719911-42719930 | Msa0731590:CDS | 55.0% | |
| GGCCAATGTCCGAGCATTAC+GGG | - | chr5_1:42719912-42719931 | Msa0731590:CDS | 55.0% | |
| CAATGTCCGAGCATTACGGG+CGG | - | chr5_1:42719915-42719934 | Msa0731590:CDS | 55.0% | |
| TCAAGACCGCCCGTAATGCT+CGG | + | chr5_1:42719924-42719943 | None:intergenic | 55.0% | |
| CTAATCGGCCCCCAAAAGAC+AGG | + | chr5_1:42720182-42720201 | None:intergenic | 55.0% | |
| GAGTTAACCACCCCAGGTAG+TGG | - | chr5_1:42722443-42722462 | Msa0731590:intron | 55.0% | |
| TTTGCTACCACTACCTGGGG+TGG | + | chr5_1:42722453-42722472 | None:intergenic | 55.0% | |
| ! | GGGCGCAAAAGGTGGGATTT+TGG | - | chr5_1:42722688-42722707 | Msa0731590:intron | 55.0% |
| TTATCGTTGGCAAGGCCGGT+TGG | - | chr5_1:42723150-42723169 | Msa0731590:CDS | 55.0% | |
| TATCGTTGGCAAGGCCGGTT+GGG | - | chr5_1:42723151-42723170 | Msa0731590:CDS | 55.0% | |
| ! | AAGGTCTGGGGTTCAAACCC+CGG | - | chr5_1:42726271-42726290 | Msa0731590:intron | 55.0% |
| GGTTGTAAGCCCATCTAGGC+CGG | - | chr5_1:42727907-42727926 | Msa0731590:intron | 55.0% | |
| TAAGTCAGGCCGGCCTAGAT+GGG | + | chr5_1:42727919-42727938 | None:intergenic | 55.0% | |
| ATAAGTCAGGCCGGCCTAGA+TGG | + | chr5_1:42727920-42727939 | None:intergenic | 55.0% | |
| GGGTTGCGAATAAGTCAGGC+CGG | + | chr5_1:42727929-42727948 | None:intergenic | 55.0% | |
| CCAGTGCGCCTATCATCAAC+AGG | + | chr5_1:42729557-42729576 | None:intergenic | 55.0% | |
| !! | CCTGTTGATGATAGGCGCAC+TGG | - | chr5_1:42729554-42729573 | Msa0731590:intron | 55.0% |
| ! | CTTGCCACTTCTTCATCCCC+TGG | + | chr5_1:42730714-42730733 | None:intergenic | 55.0% |
| CAGGGGATGAAGAAGTGGCA+AGG | - | chr5_1:42730712-42730731 | Msa0731590:intron | 55.0% | |
| !! | CAAGCAAGTGTCGATGGTGC+TGG | - | chr5_1:42730988-42731007 | Msa0731590:intron | 55.0% |
| CGCCCGTAATGCTCGGACAT+TGG | + | chr5_1:42719917-42719936 | None:intergenic | 60.0% | |
| CACAATCCAGGGTCGGTCCA+AGG | - | chr5_1:42726557-42726576 | Msa0731590:intron | 60.0% | |
| AATTGGGCCCTCTACAGGCG+TGG | + | chr5_1:42726611-42726630 | None:intergenic | 60.0% | |
| GTGACCACTTGTAGCCCCCT+TGG | - | chr5_1:42727336-42727355 | Msa0731590:intron | 60.0% | |
| GGAACCAAGGGGGCTACAAG+TGG | + | chr5_1:42727343-42727362 | None:intergenic | 60.0% | |
| TAATCTAGAGGGGGGAGGGG+GGG | + | chr5_1:42729178-42729197 | None:intergenic | 60.0% | |
| GTAATCTAGAGGGGGGAGGG+GGG | + | chr5_1:42729179-42729198 | None:intergenic | 60.0% | |
| GGTAATCTAGAGGGGGGAGG+GGG | + | chr5_1:42729180-42729199 | None:intergenic | 60.0% | |
| CGGTAATCTAGAGGGGGGAG+GGG | + | chr5_1:42729181-42729200 | None:intergenic | 60.0% | |
| GCGGTAATCTAGAGGGGGGA+GGG | + | chr5_1:42729182-42729201 | None:intergenic | 60.0% | |
| AGCGGTAATCTAGAGGGGGG+AGG | + | chr5_1:42729183-42729202 | None:intergenic | 60.0% | |
| !! | GCAAGTGTCGATGGTGCTGG+AGG | - | chr5_1:42730991-42731010 | Msa0731590:intron | 60.0% |
| CCTATGCCTTGGACCGACCC+TGG | + | chr5_1:42726566-42726585 | None:intergenic | 65.0% | |
| CCAGGGTCGGTCCAAGGCAT+AGG | - | chr5_1:42726563-42726582 | Msa0731590:intron | 65.0% | |
| GGTCGGTCCAAGGCATAGGC+CGG | - | chr5_1:42726567-42726586 | Msa0731590:intron | 65.0% | |
| GTCGGTCCAAGGCATAGGCC+GGG | - | chr5_1:42726568-42726587 | Msa0731590:intron | 65.0% | |
| TCGGTCCAAGGCATAGGCCG+GGG | - | chr5_1:42726569-42726588 | Msa0731590:intron | 65.0% | |
| CGGTCCAAGGCATAGGCCGG+GGG | - | chr5_1:42726570-42726589 | Msa0731590:intron | 70.0% | |
| CAAGGCATAGGCCGGGGGTG+CGG | - | chr5_1:42726575-42726594 | Msa0731590:intron | 70.0% | |
| CCTGGGGCCACGCCTGTAGA+GGG | - | chr5_1:42726601-42726620 | Msa0731590:intron | 70.0% | |
| CGCACCCCCGGCCTATGCCT+TGG | + | chr5_1:42726577-42726596 | None:intergenic | 75.0% | |
| GCCTGGGGCCACGCCTGTAG+AGG | - | chr5_1:42726600-42726619 | Msa0731590:intron | 75.0% | |
| CCCTCTACAGGCGTGGCCCC+AGG | + | chr5_1:42726604-42726623 | None:intergenic | 75.0% | |
| !! | GGCATAGGCCGGGGGTGCGG+CGG | - | chr5_1:42726578-42726597 | Msa0731590:intron | 80.0% |
| !! | AGGCCGGGGGTGCGGCGGCC+TGG | - | chr5_1:42726583-42726602 | Msa0731590:intron | 90.0% |
| !! | GGCCGGGGGTGCGGCGGCCT+GGG | - | chr5_1:42726584-42726603 | Msa0731590:intron | 90.0% |
| !! | GCCGGGGGTGCGGCGGCCTG+GGG | - | chr5_1:42726585-42726604 | Msa0731590:intron | 90.0% |
| ! | GCCCCAGGCCGCCGCACCCC+CGG | + | chr5_1:42726589-42726608 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 42719793 | 42731586 | 42719793 | ID=Msa0731590;Name=Msa0731590 |
| chr5_1 | mRNA | 42719793 | 42731586 | 42719793 | ID=Msa0731590-mRNA-1;Parent=Msa0731590;Name=Msa0731590-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.66|0.57|0.71|1|1|7|95|496 |
| chr5_1 | exon | 42719793 | 42720040 | 42719793 | ID=Msa0731590-mRNA-1:exon:12300;Parent=Msa0731590-mRNA-1 |
| chr5_1 | exon | 42720328 | 42720428 | 42720328 | ID=Msa0731590-mRNA-1:exon:12299;Parent=Msa0731590-mRNA-1 |
| chr5_1 | exon | 42720518 | 42720722 | 42720518 | ID=Msa0731590-mRNA-1:exon:12298;Parent=Msa0731590-mRNA-1 |
| chr5_1 | exon | 42721086 | 42721419 | 42721086 | ID=Msa0731590-mRNA-1:exon:12297;Parent=Msa0731590-mRNA-1 |
| chr5_1 | exon | 42721784 | 42721956 | 42721784 | ID=Msa0731590-mRNA-1:exon:12296;Parent=Msa0731590-mRNA-1 |
| chr5_1 | exon | 42723144 | 42723260 | 42723144 | ID=Msa0731590-mRNA-1:exon:12295;Parent=Msa0731590-mRNA-1 |
| chr5_1 | exon | 42731179 | 42731586 | 42731179 | ID=Msa0731590-mRNA-1:exon:12294;Parent=Msa0731590-mRNA-1 |
| chr5_1 | CDS | 42731179 | 42731586 | 42731179 | ID=Msa0731590-mRNA-1:cds;Parent=Msa0731590-mRNA-1 |
| chr5_1 | CDS | 42723144 | 42723260 | 42723144 | ID=Msa0731590-mRNA-1:cds;Parent=Msa0731590-mRNA-1 |
| chr5_1 | CDS | 42721784 | 42721956 | 42721784 | ID=Msa0731590-mRNA-1:cds;Parent=Msa0731590-mRNA-1 |
| chr5_1 | CDS | 42721086 | 42721419 | 42721086 | ID=Msa0731590-mRNA-1:cds;Parent=Msa0731590-mRNA-1 |
| chr5_1 | CDS | 42720518 | 42720722 | 42720518 | ID=Msa0731590-mRNA-1:cds;Parent=Msa0731590-mRNA-1 |
| chr5_1 | CDS | 42720328 | 42720428 | 42720328 | ID=Msa0731590-mRNA-1:cds;Parent=Msa0731590-mRNA-1 |
| chr5_1 | CDS | 42719888 | 42720040 | 42719888 | ID=Msa0731590-mRNA-1:cds;Parent=Msa0731590-mRNA-1 |
| chr5_1 | three_prime_UTR | 42719793 | 42719887 | 42719793 | ID=Msa0731590-mRNA-1:three_prime_utr;Parent=Msa0731590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
