AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0365210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0365210 MtrunA17_Chr3g0104551 96.868 894 18 1 1 894 1 884 0.0 1790
Msa0365210 MtrunA17_Chr2g0298121 46.058 964 448 12 1 894 1 962 0.0 817
Msa0365210 MtrunA17_Chr1g0173371 39.139 976 506 14 6 894 6 980 0.0 693
Msa0365210 MtrunA17_Chr7g0257461 43.478 759 415 9 1 747 1 757 0.0 639
Msa0365210 MtrunA17_Chr7g0257461 44.318 88 49 0 807 894 896 983 6.74e-15 79.3
Msa0365210 MtrunA17_Chr4g0072071 42.234 573 270 8 383 894 32 604 2.13e-145 443
Msa0365210 MtrunA17_Chr4g0072061 50.581 344 152 8 57 391 6 340 7.02e-106 331
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0365210 AT2G29890.2 54.376 914 394 6 1 894 1 911 0.0 1024
Msa0365210 AT2G29890.1 54.386 912 395 5 1 894 1 909 0.0 1024
Msa0365210 AT2G29890.5 54.386 912 395 5 1 894 1 909 0.0 1024
Msa0365210 AT2G29890.3 53.483 933 395 7 1 894 1 933 0.0 1015
Msa0365210 AT2G29890.4 53.180 912 389 6 1 894 1 892 0.0 989
Msa0365210 AT4G30160.3 45.492 976 448 13 1 894 1 974 0.0 822
Msa0365210 AT4G30160.4 45.492 976 448 13 1 894 1 974 0.0 822
Msa0365210 AT4G30160.1 45.492 976 448 13 1 894 1 974 0.0 822
Msa0365210 AT4G30160.2 45.076 985 448 14 1 894 1 983 0.0 816
Msa0365210 AT5G57320.2 43.672 964 471 12 1 894 1 962 0.0 806
Msa0365210 AT5G57320.1 43.672 964 471 12 1 894 1 962 0.0 806
Msa0365210 AT2G41740.2 45.737 739 387 7 6 734 4 738 0.0 660
Msa0365210 AT2G41740.2 41.129 124 69 2 775 894 853 976 3.74e-16 84.0
Msa0365210 AT2G41740.1 45.737 739 387 7 6 734 4 738 0.0 660
Msa0365210 AT2G41740.1 41.129 124 69 2 775 894 853 976 3.74e-16 84.0
Msa0365210 AT3G57410.4 45.306 735 396 3 6 734 6 740 0.0 658
Msa0365210 AT3G57410.4 55.000 60 27 0 835 894 906 965 2.55e-12 71.6
Msa0365210 AT3G57410.1 45.306 735 396 3 6 734 6 740 0.0 658
Msa0365210 AT3G57410.1 55.000 60 27 0 835 894 906 965 2.55e-12 71.6
Msa0365210 AT3G57410.9 45.306 735 396 3 6 734 6 740 0.0 658
Msa0365210 AT3G57410.9 55.000 60 27 0 835 894 906 965 2.55e-12 71.6
Msa0365210 AT3G57410.5 45.306 735 396 3 6 734 6 740 0.0 658
Msa0365210 AT3G57410.5 55.000 60 27 0 835 894 906 965 2.55e-12 71.6
Msa0365210 AT3G57410.3 45.306 735 396 3 6 734 6 740 0.0 658
Msa0365210 AT3G57410.3 55.000 60 27 0 835 894 906 965 2.55e-12 71.6
Msa0365210 AT3G57410.2 45.306 735 396 3 6 734 6 740 0.0 658
Msa0365210 AT3G57410.2 55.000 60 27 0 835 894 906 965 2.55e-12 71.6
Msa0365210 AT3G57410.7 45.306 735 396 3 6 734 6 740 0.0 658
Msa0365210 AT3G57410.7 55.000 60 27 0 835 894 906 965 2.55e-12 71.6
Msa0365210 AT3G57410.8 45.306 735 396 3 6 734 6 740 0.0 658
Msa0365210 AT3G57410.8 55.000 60 27 0 835 894 906 965 2.55e-12 71.6
Msa0365210 AT3G57410.6 45.306 735 396 3 6 734 6 740 0.0 657
Msa0365210 AT3G57410.10 45.291 722 389 3 6 721 6 727 0.0 640

Find 197 sgRNAs with CRISPR-Local

Find 450 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAATAGGCATTATCTTTA+TGG 0.120321 3_1:+58991249 None:intergenic
CTCATTATGACATTCATTAT+TGG 0.143351 3_1:-58990710 Msa0365210:CDS
CTCCAATTGTAAAGCTATTT+TGG 0.146225 3_1:-58989767 Msa0365210:intron
CCTTCCATTACAACATAAAT+AGG 0.191577 3_1:+58986578 None:intergenic
GCCAAAGAGAGATTTATATT+TGG 0.210127 3_1:-58986919 Msa0365210:CDS
GTCTCGTCCCTTGCATTTCC+TGG 0.239598 3_1:+58988695 None:intergenic
ATAGAAACTTCTGTGATTCT+TGG 0.247886 3_1:+58990429 None:intergenic
TTAGGTCGCACTTTACTAAT+TGG 0.251499 3_1:-58989146 Msa0365210:CDS
ATGGTATTGTTGCAGATTAT+TGG 0.260452 3_1:-58986383 Msa0365210:intron
AGTTTGTAGAAAGCAGATTT+TGG 0.272885 3_1:+58985435 None:intergenic
GGAGAGTTCTGGAGTTTATT+TGG 0.279925 3_1:-58989840 Msa0365210:CDS
TTAAGGAATTACCTCTCTTT+TGG 0.280881 3_1:+58985580 None:intergenic
TTCTCAGTGGATTGGAAGTT+TGG 0.281543 3_1:-58990933 Msa0365210:intron
CCAAAGAGAGATTTATATTT+GGG 0.291213 3_1:-58986918 Msa0365210:CDS
CGAAGGTCTGACTCTGAAAC+TGG 0.317373 3_1:+58990886 None:intergenic
AAACAGAAACTAACCATAAC+TGG 0.332152 3_1:+58988221 None:intergenic
TTTGATCGCTGTTCTTCTTT+CGG 0.335184 3_1:+58989487 None:intergenic
CCCAAATATAAATCTCTCTT+TGG 0.338138 3_1:+58986918 None:intergenic
GATTGGAAAGTACCAACTTT+AGG 0.341579 3_1:-58989164 Msa0365210:CDS
TCCAAGTCTTTATTGATAAT+AGG 0.343729 3_1:+58991235 None:intergenic
GATCCTGCAGCGTTCAATAT+AGG 0.353176 3_1:-58990463 Msa0365210:CDS
ATAACCCTGATGCTTGAATA+TGG 0.353928 3_1:+58988975 None:intergenic
CAGAACTATGTATGCACTTC+CGG 0.358688 3_1:+58990852 None:intergenic
ATTCTGATGTCGGAGAGTTC+TGG 0.367136 3_1:-58989851 Msa0365210:CDS
AGATTCTTCAAAGAGCTTCT+TGG 0.369550 3_1:+58986175 None:intergenic
CTCAGCCATATTCAAGCATC+AGG 0.370488 3_1:-58988980 Msa0365210:intron
TTCCCTTCCCTCACAGATAC+AGG 0.377925 3_1:+58987346 None:intergenic
GTAGAGGATGGAAAATTTGT+TGG 0.378462 3_1:-58989876 Msa0365210:intron
CACCAAAATAGCTTTACAAT+TGG 0.387240 3_1:+58989765 None:intergenic
GAAGGCGGGTCTCGAGGAAT+TGG 0.392914 3_1:+58989807 None:intergenic
CAGGGAAAACTTTGTCCAAC+TGG 0.393144 3_1:-58989611 Msa0365210:CDS
TGTTCTTCTTTCGGTCAATA+AGG 0.393207 3_1:+58989496 None:intergenic
CTTTCTACAAACTCCCTAGA+TGG 0.394348 3_1:-58985425 Msa0365210:CDS
ATCCTGCAGCGTTCAATATA+GGG 0.395581 3_1:-58990462 Msa0365210:CDS
TTGATGCCTGTCACTGGATT+CGG 0.399822 3_1:+58985608 None:intergenic
CATAGTATTGATGTGGGAAA+TGG 0.408159 3_1:+58988265 None:intergenic
ACCTTTGGCTCTTTCTTGAA+TGG 0.408574 3_1:+58990066 None:intergenic
ACGGATTCGCTCCTGCAGTT+TGG 0.409113 3_1:+58991203 None:intergenic
CATTTCCCACATCAATACTA+TGG 0.410826 3_1:-58988264 Msa0365210:CDS
CCTTGAATATGATTAACCTT+TGG 0.412244 3_1:+58987931 None:intergenic
GGCTCAGACTATAGGCAATT+AGG 0.413950 3_1:-58986230 Msa0365210:CDS
CTTGAGTTGGATGCAGCCTT+AGG 0.418274 3_1:-58990485 Msa0365210:CDS
TAAACTTGCAGTCTCGTTTG+AGG 0.418377 3_1:+58985703 None:intergenic
CTTCCATTACAACATAAATA+GGG 0.420812 3_1:+58986579 None:intergenic
AATCAAGTGTTGCTTTAAGT+TGG 0.421407 3_1:-58991285 Msa0365210:five_prime_UTR
AGAACGTCCCAGAAAATATC+AGG 0.421877 3_1:+58987319 None:intergenic
TCAAGAAAGAGCCAAAGGTT+TGG 0.424877 3_1:-58990062 Msa0365210:CDS
GTAGTACAGTATACATTTCC+AGG 0.425304 3_1:-58988713 Msa0365210:CDS
TCGAGACCCGCCTTCTAGTC+AGG 0.426033 3_1:-58989799 Msa0365210:CDS
TTGAACAACCTCCAAACCTT+TGG 0.426187 3_1:+58990051 None:intergenic
AGTTTGCAGAATATAGCAAT+AGG 0.429248 3_1:+58987569 None:intergenic
TTATGACATTCATTATTGGC+TGG 0.432853 3_1:-58990706 Msa0365210:CDS
ACTGTAAAGTCTTGTGTGTT+CGG 0.433785 3_1:+58988748 None:intergenic
GTAGCACTGTTTCGAGTTCA+AGG 0.436359 3_1:-58987744 Msa0365210:CDS
ATCTAGAAGTAATCCAGTTA+TGG 0.440446 3_1:-58988234 Msa0365210:intron
AGTCCCTATTTATGTTGTAA+TGG 0.441768 3_1:-58986582 Msa0365210:CDS
GCCACAGATTCCTGACTAGA+AGG 0.442065 3_1:+58989789 None:intergenic
TATTTGGGTTGGATTGCATT+CGG 0.445728 3_1:-58986903 Msa0365210:CDS
GGCTCATCATCCACTTCATC+AGG 0.445910 3_1:+58988937 None:intergenic
AAATGCGAGGTGGCCACAAT+AGG 0.446540 3_1:-58990001 Msa0365210:intron
CCTCGACAGGATAAATCTAC+AGG 0.451682 3_1:-58989630 Msa0365210:intron
CTGGGACGTTCTTGGTGGAA+AGG 0.455929 3_1:-58987308 Msa0365210:CDS
TCAAAGAGCTTCTTGGCCGC+TGG 0.456525 3_1:+58986182 None:intergenic
ACTTTATATTCTCAGTGGAT+TGG 0.458509 3_1:-58990941 Msa0365210:intron
CAGTTCTGTTGCTGAAGAAT+CGG 0.458599 3_1:+58985730 None:intergenic
CCATTCTATCAAGAAGAGTA+TGG 0.460217 3_1:+58987499 None:intergenic
ACTACTTCTTCGACGGCCAT+TGG 0.461985 3_1:+58986274 None:intergenic
CCAAAGGTTAATCATATTCA+AGG 0.462892 3_1:-58987931 Msa0365210:intron
GGAGGTTGTTCAATATATCA+AGG 0.463674 3_1:-58990041 Msa0365210:CDS
ATCAAGCAATAAAACATCTT+CGG 0.464078 3_1:+58986943 None:intergenic
TTACCAGCACTGTTATTAGC+AGG 0.464732 3_1:+58986152 None:intergenic
ACCGTTAGGGGTAGAGTCCC+TGG 0.464907 3_1:+58986319 None:intergenic
GTTAAATTGATGCCTGTCAC+TGG 0.465308 3_1:+58985602 None:intergenic
GGAGTGCAGGCTCAGACTAT+AGG 0.467038 3_1:-58986238 Msa0365210:CDS
GTGCCGCTGCGATCTATAGA+TGG 0.468107 3_1:+58988916 None:intergenic
GAAATGGATGTCCTTGTTGA+AGG 0.468405 3_1:-58986617 Msa0365210:CDS
TACATTCAGCAAAGAAATGC+TGG 0.469130 3_1:-58989582 Msa0365210:CDS
TTCCCTATATTGAACGCTGC+AGG 0.470458 3_1:+58990460 None:intergenic
CCTTGTTTAATACCGATTGA+AGG 0.471785 3_1:-58990395 Msa0365210:CDS
AGAGAGATTTATATTTGGGT+TGG 0.471935 3_1:-58986914 Msa0365210:CDS
GCTTCTTGGCCGCTGGAGTA+GGG 0.472604 3_1:+58986189 None:intergenic
CCTATTTATGTTGTAATGGA+AGG 0.475164 3_1:-58986578 Msa0365210:CDS
TAGTCTGAGCCTGCACTCCT+AGG 0.476520 3_1:+58986242 None:intergenic
ACCACTCGAAGTTGCTCGTA+AGG 0.476879 3_1:+58985635 None:intergenic
GCAGCTATGTATACATGGAT+TGG 0.478295 3_1:-58987543 Msa0365210:CDS
CTTCAACTCAGGAGACTTCA+AGG 0.479650 3_1:-58987095 Msa0365210:intron
CTGAAGCAGCTATGTATACA+TGG 0.481079 3_1:-58987548 Msa0365210:CDS
CAAGTGTTGCTTTAAGTTGG+CGG 0.484713 3_1:-58991282 Msa0365210:five_prime_UTR
GAAGTAAACACTCCTTCAAT+CGG 0.485588 3_1:+58990383 None:intergenic
CCATACTCTTCTTGATAGAA+TGG 0.486081 3_1:-58987499 Msa0365210:CDS
CGCTCCTGCAGTTTGGAATG+CGG 0.486778 3_1:+58991210 None:intergenic
TATGACATTCATTATTGGCT+GGG 0.489091 3_1:-58990705 Msa0365210:CDS
AGTCAGCCTGTACACATGTA+AGG 0.489217 3_1:-58990330 Msa0365210:CDS
TCAAAGCAAGGGAATTTGAA+TGG 0.490607 3_1:-58990362 Msa0365210:CDS
ACCATTCTTGCTTTACTATG+TGG 0.492980 3_1:-58992287 Msa0365210:five_prime_UTR
CAATTCTGAAAGGAAACTCC+AGG 0.494273 3_1:-58986337 Msa0365210:CDS
GCCACATAGTAAAGCAAGAA+TGG 0.494650 3_1:+58992286 None:intergenic
GGCGGAATATCCAAAAGAAA+AGG 0.498002 3_1:-58987287 Msa0365210:CDS
CCAAAAGAAAAGGAGATTCA+AGG 0.498307 3_1:-58987277 Msa0365210:CDS
TTCAATGATGACCTCAGAAA+AGG 0.498549 3_1:+58990154 None:intergenic
GAGACTAGGCTTTACGAAGA+AGG 0.499203 3_1:-58989111 Msa0365210:CDS
GCTCCTGCAGTTTGGAATGC+GGG 0.505209 3_1:+58991211 None:intergenic
ACTATAGGCAATTAGGCAAT+CGG 0.505338 3_1:-58986223 Msa0365210:CDS
AGAAAGAGCCAAAGGTTTGG+AGG 0.505490 3_1:-58990059 Msa0365210:CDS
CTGAAACTGGAACCAACTGC+TGG 0.506411 3_1:+58990899 None:intergenic
AGCTTCTTGGCCGCTGGAGT+AGG 0.512626 3_1:+58986188 None:intergenic
TTGAACGCTGCAGGATCCTA+AGG 0.513188 3_1:+58990469 None:intergenic
CTATGTTGTCCACGTGAAAG+AGG 0.515019 3_1:-58990303 Msa0365210:intron
TATGGTCTCTTGCTGAAGAA+AGG 0.515763 3_1:+58987517 None:intergenic
TTTGTTGGCGATTCTGATGT+CGG 0.520132 3_1:-58989861 Msa0365210:CDS
GACCTTCGAAAATTCTATAC+CGG 0.522930 3_1:-58990871 Msa0365210:CDS
CCATACTTGATCGACTTGGA+TGG 0.530773 3_1:+58987698 None:intergenic
GCCTATTATCAATAAAGACT+TGG 0.530965 3_1:-58991236 Msa0365210:CDS
CCTTCAATCGGTATTAAACA+AGG 0.533777 3_1:+58990395 None:intergenic
CTTCAGGTTTGGCGAGTCGA+TGG 0.534248 3_1:-58988797 Msa0365210:intron
TCACCTCTACCTAGGAGTGC+AGG 0.534318 3_1:-58986251 Msa0365210:CDS
AAGTGCCTTGTCTGATGCCA+AGG 0.543362 3_1:+58990505 None:intergenic
GCTGGGAAATGACACAAAGA+AGG 0.546293 3_1:-58990688 Msa0365210:intron
TTTGCAGGTGGATTCAACCT+TGG 0.549662 3_1:-58990522 Msa0365210:intron
GGCTCAAATTCATGAGGGCA+AGG 0.552861 3_1:-58987979 Msa0365210:CDS
TACATGTGTACAGGCTGACT+TGG 0.553621 3_1:+58990333 None:intergenic
GTTCAATATAGGGAAATTCA+AGG 0.553914 3_1:-58990452 Msa0365210:CDS
GAACTCGAAACAGTGCTACC+AGG 0.554752 3_1:+58987748 None:intergenic
TGTGTTCGGTAACTGAAAGA+AGG 0.555340 3_1:+58988762 None:intergenic
TCTCCTGCTAATAACAGTGC+TGG 0.556720 3_1:-58986155 Msa0365210:intron
ATCAGACAAGGCACTTGAGT+TGG 0.559150 3_1:-58990498 Msa0365210:CDS
AGAAGCTCTCAACCTCGGCT+TGG 0.559559 3_1:-58986864 Msa0365210:intron
GTTTCTCCGAATCCAGTGAC+AGG 0.560444 3_1:-58985614 Msa0365210:CDS
GAGTTCTGGAGTTTATTTGG+TGG 0.561657 3_1:-58989837 Msa0365210:CDS
CAGATTCCTGACTAGAAGGC+GGG 0.562202 3_1:+58989793 None:intergenic
AAGAAGCGTATAGAAGAAAA+CGG 0.563901 3_1:-58987798 Msa0365210:CDS
TAAACCATACTTGATCGACT+TGG 0.564066 3_1:+58987694 None:intergenic
GAGCCTGCACTCCTAGGTAG+AGG 0.564574 3_1:+58986248 None:intergenic
CTGAATGTATTGCTTCCAGT+TGG 0.566123 3_1:+58989596 None:intergenic
GAAAGAACTTCCTGATGAAG+TGG 0.566535 3_1:-58988947 Msa0365210:CDS
AGTAAAGTGCGACCTAAAGT+TGG 0.566921 3_1:+58989152 None:intergenic
TACCTGTATCTGTGAGGGAA+GGG 0.569592 3_1:-58987348 Msa0365210:CDS
AGTCTCCCTTACATGTGTAC+AGG 0.572174 3_1:+58990324 None:intergenic
AAACAAGCTGAAGATGTCAC+TGG 0.572603 3_1:-58985397 Msa0365210:CDS
GGAGTGTTTACTTCAAAGCA+AGG 0.574599 3_1:-58990374 Msa0365210:CDS
ACCATTCAAGAAAGAGCCAA+AGG 0.574717 3_1:-58990067 Msa0365210:CDS
AATCAGCCATAGTATTGATG+TGG 0.575918 3_1:+58988258 None:intergenic
CTACCTGTATCTGTGAGGGA+AGG 0.575928 3_1:-58987349 Msa0365210:CDS
AGCGGTTCTATCATTTCCAA+TGG 0.578457 3_1:-58986290 Msa0365210:CDS
CCCTTACGAGCAACTTCGAG+TGG 0.581361 3_1:-58985636 Msa0365210:CDS
AAACTAAGAACTAAGAGTGA+TGG 0.581669 3_1:+58992202 None:intergenic
GTGTATTGAAAACCAGCAGT+TGG 0.581938 3_1:-58990911 Msa0365210:CDS
AGAAAGCTTGCAATTCTGAA+AGG 0.583090 3_1:-58986347 Msa0365210:CDS
GATCCCGCATTCCAAACTGC+AGG 0.587803 3_1:-58991214 Msa0365210:CDS
GTGTTCGGTAACTGAAAGAA+GGG 0.592436 3_1:+58988763 None:intergenic
TGACTAGAAGGCGGGTCTCG+AGG 0.593017 3_1:+58989801 None:intergenic
TGAAACTCAAAATGAAAACC+TGG 0.595055 3_1:-58987766 Msa0365210:CDS
TTCAACCTTGGCATCAGACA+AGG 0.595130 3_1:-58990510 Msa0365210:CDS
ATACATTTCCAGGAAATGCA+AGG 0.596306 3_1:-58988703 Msa0365210:CDS
TCCAGGGACTCTACCCCTAA+CGG 0.597480 3_1:-58986320 Msa0365210:CDS
CTCGACAGGATAAATCTACA+GGG 0.599233 3_1:-58989629 Msa0365210:intron
TATATCAAGGATAATAAGCA+TGG 0.599943 3_1:-58990028 Msa0365210:CDS
GCCTTCTAGTCAGGAATCTG+TGG 0.600268 3_1:-58989790 Msa0365210:CDS
GCTTGGCAGTAGATGTGTAA+TGG 0.601151 3_1:-58988657 Msa0365210:intron
ACCCCTAACGGTCACAAAAG+CGG 0.603179 3_1:-58986308 Msa0365210:CDS
TTTGCATTGAAAATAACCAA+AGG 0.603205 3_1:-58987232 Msa0365210:intron
CAATAATGAATGTCATAATG+AGG 0.605850 3_1:+58990711 None:intergenic
GAAGTAGTTCACCTCTACCT+AGG 0.605938 3_1:-58986259 Msa0365210:CDS
GGCCTAAAACAGTTGAGACT+AGG 0.609206 3_1:-58989125 Msa0365210:CDS
ACAGATACAGGTAGCTGTGT+CGG 0.609783 3_1:+58987358 None:intergenic
GTCAGCCTGTACACATGTAA+GGG 0.612700 3_1:-58990329 Msa0365210:CDS
CATCAATTTAACCAAAAGAG+AGG 0.613671 3_1:-58985591 Msa0365210:intron
AATGAATGTCATAATGAGGA+GGG 0.613936 3_1:+58990715 None:intergenic
GTATATATTCCAACCTATTG+TGG 0.614583 3_1:+58989988 None:intergenic
GAGGTGAACTACTTCTTCGA+CGG 0.616812 3_1:+58986267 None:intergenic
AAACAAGAAGCTCTCAACCT+CGG 0.620869 3_1:-58986869 Msa0365210:CDS
TAATGAATGTCATAATGAGG+AGG 0.621615 3_1:+58990714 None:intergenic
CCACTCGAAGTTGCTCGTAA+GGG 0.623058 3_1:+58985636 None:intergenic
CACAACTCACCTCTTTCACG+TGG 0.627739 3_1:+58990294 None:intergenic
GGACGTTCTTGGTGGAAAGG+CGG 0.631780 3_1:-58987305 Msa0365210:CDS
TACTCTTCTTGATAGAATGG+TGG 0.633256 3_1:-58987496 Msa0365210:CDS
ATCAGCCATAGTATTGATGT+GGG 0.636013 3_1:+58988259 None:intergenic
GAGTGTTTACTTCAAAGCAA+GGG 0.638785 3_1:-58990373 Msa0365210:CDS
TACATTTCCAGGAAATGCAA+GGG 0.638906 3_1:-58988702 Msa0365210:CDS
ACAGCTACCTGTATCTGTGA+GGG 0.639394 3_1:-58987353 Msa0365210:CDS
TTTCAGGCTCAAATTCATGA+GGG 0.644458 3_1:-58987984 Msa0365210:intron
ATCAAGGATAATAAGCATGG+TGG 0.651412 3_1:-58990025 Msa0365210:CDS
TATAGAAGAAAACGGTACCG+TGG 0.659614 3_1:-58987790 Msa0365210:CDS
AGAGATATACAATTATACGC+AGG 0.661641 3_1:-58986978 Msa0365210:CDS
TCAGCCATATTCAAGCATCA+GGG 0.667382 3_1:-58988979 Msa0365210:intron
ACAGATTCCTGACTAGAAGG+CGG 0.672389 3_1:+58989792 None:intergenic
GCAGACAACTTACCAAGCCG+AGG 0.672911 3_1:+58986852 None:intergenic
CACAGCTACCTGTATCTGTG+AGG 0.674781 3_1:-58987354 Msa0365210:CDS
AATTCTGAAAGGAAACTCCA+GGG 0.675066 3_1:-58986336 Msa0365210:CDS
GTTGCTGAAGAATCGGACAG+TGG 0.690958 3_1:+58985737 None:intergenic
TAAGCATGGTGGAAAATGCG+AGG 0.698213 3_1:-58990014 Msa0365210:CDS
AAGATCAGACAAGACTCACA+CGG 0.701655 3_1:-58989202 Msa0365210:CDS
CTAGCGATAAGCCTTCAACA+AGG 0.711385 3_1:+58986606 None:intergenic
GAGCCATCTATAGATCGCAG+CGG 0.737750 3_1:-58988919 Msa0365210:CDS
GCATGGTGGAAAATGCGAGG+TGG 0.738880 3_1:-58990011 Msa0365210:CDS
GAACACACAAGACTTTACAG+TGG 0.748289 3_1:-58988746 Msa0365210:CDS
GCATGCATAATACACTCACG+AGG 0.773779 3_1:+58985278 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTAGTTAAATTCTT+AGG - chr3_1:58985632-58985651 Msa0365210:CDS 10.0%
!!! TGAAAAAATATCTTTTTTTA+AGG - chr3_1:58989416-58989435 Msa0365210:intron 10.0%
!!! GAAAAAATATCTTTTTTTAA+GGG - chr3_1:58989417-58989436 Msa0365210:intron 10.0%
!!! AAAAAATATCTTTTTTTAAG+GGG - chr3_1:58989418-58989437 Msa0365210:intron 10.0%
!! AACAAGTAAAAAATATATTT+GGG + chr3_1:58992300-58992319 None:intergenic 10.0%
!! AAACAAGTAAAAAATATATT+TGG + chr3_1:58992301-58992320 None:intergenic 10.0%
!!! TTATCAAACTTCTTAATTTT+TGG - chr3_1:58985674-58985693 Msa0365210:CDS 15.0%
!! TTTCAAAGAAAATCATTATA+AGG + chr3_1:58986082-58986101 None:intergenic 15.0%
!!! ATTTTGCTTATATTTTTGTT+AGG - chr3_1:58987078-58987097 Msa0365210:intron 15.0%
!! TTATATAACAATTATTGTAG+AGG - chr3_1:58987365-58987384 Msa0365210:intron 15.0%
!!! ATAGAATTAAACGAATTTTA+AGG + chr3_1:58987851-58987870 None:intergenic 15.0%
!! AATATAACTATATGAAACAT+CGG - chr3_1:58987930-58987949 Msa0365210:intron 15.0%
!!! ATCATTATTAGATTATTTTC+TGG - chr3_1:58988697-58988716 Msa0365210:CDS 15.0%
!! AAAGTTAAATCTCTATTATA+CGG + chr3_1:58989211-58989230 None:intergenic 15.0%
!!! AAAGATATTTTTTCAAGAAT+TGG + chr3_1:58989411-58989430 None:intergenic 15.0%
!!! AAAAATATCTTTTTTTAAGG+GGG - chr3_1:58989419-58989438 Msa0365210:intron 15.0%
!! CAGATACAAAAAATATATTT+GGG + chr3_1:58992227-58992246 None:intergenic 15.0%
!! ATACATGAAAAAAAGTCAAA+GGG + chr3_1:58985153-58985172 None:intergenic 20.0%
!! TCAAATTTCAAATATCTACA+TGG + chr3_1:58985555-58985574 None:intergenic 20.0%
!!! ATAAACAATTATTTTCACCT+AGG + chr3_1:58985658-58985677 None:intergenic 20.0%
!! CTTTACTATATTAAAACTTC+TGG - chr3_1:58985907-58985926 Msa0365210:intron 20.0%
!! AGAAAATCATTATAAGGATA+CGG + chr3_1:58986076-58986095 None:intergenic 20.0%
!!! AGCTTATATTTGTTTTATGA+GGG - chr3_1:58987319-58987338 Msa0365210:CDS 20.0%
!! GTTATTTAGTAGAAGAAATT+TGG + chr3_1:58987885-58987904 None:intergenic 20.0%
!! TAACACAATTAAATTGTGAA+TGG + chr3_1:58988197-58988216 None:intergenic 20.0%
!! GCATAAAAAAATATGATCAT+GGG + chr3_1:58988411-58988430 None:intergenic 20.0%
!! TTACCTGTAATTCATAAAAA+TGG - chr3_1:58988666-58988685 Msa0365210:CDS 20.0%
!!! AATCCATTTTTATGAATTAC+AGG + chr3_1:58988672-58988691 None:intergenic 20.0%
!!! TTAAAAATTTCGACAGTTTT+TGG + chr3_1:58988809-58988828 None:intergenic 20.0%
!!! CAACATTCAAATTTTTGTTT+TGG - chr3_1:58989109-58989128 Msa0365210:CDS 20.0%
!! AATGCAAATTGAATAAATAG+TGG + chr3_1:58989245-58989264 None:intergenic 20.0%
!!! AAAATATCTTTTTTTAAGGG+GGG - chr3_1:58989420-58989439 Msa0365210:intron 20.0%
!!! GATTCTTAAATTTTACTTCA+TGG - chr3_1:58989588-58989607 Msa0365210:CDS 20.0%
!!! TCATCTATTAATTTTTTTGC+AGG - chr3_1:58989644-58989663 Msa0365210:intron 20.0%
!! TACCACTTATTAATTGAATT+CGG - chr3_1:58990218-58990237 Msa0365210:intron 20.0%
!! CATTAGTGAATATTGAATAA+TGG + chr3_1:58990472-58990491 None:intergenic 20.0%
!! CATTATTCAATATTCACTAA+TGG - chr3_1:58990470-58990489 Msa0365210:CDS 20.0%
!! ATTTACTGATGAATAAAATG+AGG - chr3_1:58990518-58990537 Msa0365210:CDS 20.0%
!! AACTTATGATGTGAAATTTA+GGG - chr3_1:58991145-58991164 Msa0365210:intron 20.0%
!! AGAAAAATAACAATGATGAA+AGG + chr3_1:58991471-58991490 None:intergenic 20.0%
!! CATAATATATAACATATGCA+AGG - chr3_1:58992110-58992129 Msa0365210:intron 20.0%
!!! CATAAAAAAAATGTGCTTTT+GGG - chr3_1:58992156-58992175 Msa0365210:intron 20.0%
!!! ATAAAAAAAATGTGCTTTTG+GGG - chr3_1:58992157-58992176 Msa0365210:intron 20.0%
!! GCAGATACAAAAAATATATT+TGG + chr3_1:58992228-58992247 None:intergenic 20.0%
! ACAAAGAAAGAACAAAAACA+TGG + chr3_1:58985017-58985036 None:intergenic 25.0%
! TGATTATATGATCTGATATC+TGG - chr3_1:58985112-58985131 Msa0365210:intron 25.0%
! GATACATGAAAAAAAGTCAA+AGG + chr3_1:58985154-58985173 None:intergenic 25.0%
!!! TAGATTCTTATTTTTGCTTC+TGG - chr3_1:58985187-58985206 Msa0365210:intron 25.0%
! TTTCGTAAGCTTATGAAAAT+AGG - chr3_1:58985416-58985435 Msa0365210:CDS 25.0%
!! CATCAATTGGTTTATTTGAA+TGG - chr3_1:58985770-58985789 Msa0365210:intron 25.0%
! GGTTTATTTGAATGGAATTA+TGG - chr3_1:58985778-58985797 Msa0365210:intron 25.0%
! TATAGTAAAGAAATCAATGC+AGG + chr3_1:58985897-58985916 None:intergenic 25.0%
! GATAATAGGCATTATCTTTA+TGG + chr3_1:58986011-58986030 None:intergenic 25.0%
!! TCCAAGTCTTTATTGATAAT+AGG + chr3_1:58986025-58986044 None:intergenic 25.0%
! AGACATTCATTCAATCTAAA+AGG + chr3_1:58986151-58986170 None:intergenic 25.0%
!!! CTATTAGTTTTGCAAATTTC+TGG - chr3_1:58986219-58986238 Msa0365210:CDS 25.0%
! TCTTAACTTTATATTCTCAG+TGG - chr3_1:58986311-58986330 Msa0365210:CDS 25.0%
! CAATAATGAATGTCATAATG+AGG + chr3_1:58986549-58986568 None:intergenic 25.0%
! CTCATTATGACATTCATTAT+TGG - chr3_1:58986547-58986566 Msa0365210:CDS 25.0%
! TTAAAAATCTTTCTCTTCAG+TGG - chr3_1:58987157-58987176 Msa0365210:intron 25.0%
! TATATCAAGGATAATAAGCA+TGG - chr3_1:58987229-58987248 Msa0365210:intron 25.0%
!!! ACAAATATAAGCTCTAAAAG+AGG + chr3_1:58987312-58987331 None:intergenic 25.0%
!!! GAGCTTATATTTGTTTTATG+AGG - chr3_1:58987318-58987337 Msa0365210:CDS 25.0%
! ATAACAATTATTGTAGAGGA+TGG - chr3_1:58987369-58987388 Msa0365210:intron 25.0%
! TTGAAGTAAGAGAAATAAAG+TGG + chr3_1:58987562-58987581 None:intergenic 25.0%
!!! GTGATAATGAAATTTTTGTG+TGG - chr3_1:58987725-58987744 Msa0365210:CDS 25.0%
!! TAATGAAATTTTTGTGTGGA+TGG - chr3_1:58987729-58987748 Msa0365210:CDS 25.0%
!! AATGAAATTTTTGTGTGGAT+GGG - chr3_1:58987730-58987749 Msa0365210:CDS 25.0%
!!! TTTTAAGGATGTATAAACGA+TGG + chr3_1:58987836-58987855 None:intergenic 25.0%
! GGCATAAAAAAATATGATCA+TGG + chr3_1:58988412-58988431 None:intergenic 25.0%
! TTATATATTACGCATACAGT+TGG + chr3_1:58988762-58988781 None:intergenic 25.0%
!!! ACTTGATAACTTTTAACACA+AGG - chr3_1:58988923-58988942 Msa0365210:CDS 25.0%
! TATCTAGATGATATCTTCAT+AGG - chr3_1:58989831-58989850 Msa0365210:CDS 25.0%
!!! ATAGGAAGCATTTAATAACA+AGG - chr3_1:58989849-58989868 Msa0365210:CDS 25.0%
!! ATTTTCAATGCAAACAAATG+TGG + chr3_1:58990019-58990038 None:intergenic 25.0%
! TTTGCATTGAAAATAACCAA+AGG - chr3_1:58990025-58990044 Msa0365210:CDS 25.0%
!!! AAGATTGATTTTGTTACCTT+TGG + chr3_1:58990044-58990063 None:intergenic 25.0%
! AAAATAATCTAGATCTCACT+TGG - chr3_1:58990070-58990089 Msa0365210:CDS 25.0%
! AACCGAATTCAATTAATAAG+TGG + chr3_1:58990223-58990242 None:intergenic 25.0%
! ATCAAGCAATAAAACATCTT+CGG + chr3_1:58990317-58990336 None:intergenic 25.0%
! CCAAAGAGAGATTTATATTT+GGG - chr3_1:58990339-58990358 Msa0365210:CDS 25.0%
! CAGTAAATAAGTTATGAAGA+TGG + chr3_1:58990506-58990525 None:intergenic 25.0%
!! TTTCAATGTAGTATGGATTA+TGG - chr3_1:58990555-58990574 Msa0365210:intron 25.0%
! ACTCATTCTTTGCTAAAATA+TGG - chr3_1:58990578-58990597 Msa0365210:intron 25.0%
!! TTGTCATAAGCAGAAATTTT+TGG - chr3_1:58990618-58990637 Msa0365210:intron 25.0%
!!! TAAGCAGAAATTTTTGGAAA+TGG - chr3_1:58990624-58990643 Msa0365210:intron 25.0%
! CTTCCATTACAACATAAATA+GGG + chr3_1:58990681-58990700 None:intergenic 25.0%
! GAAAAGAAACAAGTGAAAAA+TGG + chr3_1:58990715-58990734 None:intergenic 25.0%
!!! ATGGTATTTTGATCATTGAT+CGG + chr3_1:58990790-58990809 None:intergenic 25.0%
!!! CTTTTTAAAGTCAAGAATCA+TGG + chr3_1:58990809-58990828 None:intergenic 25.0%
! GTTAAGTATGTTGGATTAAA+TGG - chr3_1:58990855-58990874 Msa0365210:CDS 25.0%
!!! CACATCATAAGTTGATAAAA+AGG + chr3_1:58991138-58991157 None:intergenic 25.0%
! CAACTTATGATGTGAAATTT+AGG - chr3_1:58991144-58991163 Msa0365210:intron 25.0%
!! CTAAACTTTTTATCTAACCA+AGG - chr3_1:58991408-58991427 Msa0365210:intron 25.0%
! TATATAACATATGCAAGGTT+TGG - chr3_1:58992115-58992134 Msa0365210:intron 25.0%
! ATATAACATATGCAAGGTTT+GGG - chr3_1:58992116-58992135 Msa0365210:intron 25.0%
!!! CCAAAAGCACATTTTTTTTA+TGG + chr3_1:58992158-58992177 None:intergenic 25.0%
!! CCATAAAAAAAATGTGCTTT+TGG - chr3_1:58992155-58992174 Msa0365210:intron 25.0%
!! TAAAAAAAATGTGCTTTTGG+GGG - chr3_1:58992158-58992177 Msa0365210:intron 25.0%
!!! TGGGCATTTATTTTCTTTTA+AGG + chr3_1:58992208-58992227 None:intergenic 25.0%
!!! TGCTATGATGTGATTTTTTT+AGG - chr3_1:58992267-58992286 Msa0365210:five_prime_UTR 25.0%
AAACTAAGAACTAAGAGTGA+TGG + chr3_1:58985058-58985077 None:intergenic 30.0%
CAGATCATATAATCATACCT+TGG + chr3_1:58985107-58985126 None:intergenic 30.0%
CACAAAAATTGGAAGAAGAA+AGG + chr3_1:58985336-58985355 None:intergenic 30.0%
TCTCAGTGTATCACAAAAAT+TGG + chr3_1:58985347-58985366 None:intergenic 30.0%
ATAAGCTGTTTATCCAAACA+AGG - chr3_1:58985529-58985548 Msa0365210:intron 30.0%
TTAGTTAAATTCTTAGGCCT+AGG - chr3_1:58985638-58985657 Msa0365210:CDS 30.0%
!! AATCAAGTGTTGCTTTAAGT+TGG - chr3_1:58985972-58985991 Msa0365210:intron 30.0%
GCCTATTATCAATAAAGACT+TGG - chr3_1:58986021-58986040 Msa0365210:intron 30.0%
ACTTTATATTCTCAGTGGAT+TGG - chr3_1:58986316-58986335 Msa0365210:CDS 30.0%
TGACATTTCATAGGTTTAAG+AGG + chr3_1:58986467-58986486 None:intergenic 30.0%
! TCGAGCATTTTATATGTTCT+CGG - chr3_1:58986493-58986512 Msa0365210:intron 30.0%
! TTTTATATGTTCTCGGAAAC+AGG - chr3_1:58986500-58986519 Msa0365210:intron 30.0%
AATGAATGTCATAATGAGGA+GGG + chr3_1:58986545-58986564 None:intergenic 30.0%
TAATGAATGTCATAATGAGG+AGG + chr3_1:58986546-58986565 None:intergenic 30.0%
TTATGACATTCATTATTGGC+TGG - chr3_1:58986551-58986570 Msa0365210:CDS 30.0%
! TATGACATTCATTATTGGCT+GGG - chr3_1:58986552-58986571 Msa0365210:CDS 30.0%
! AAGCCTAAAAACTTTTCATG+CGG + chr3_1:58986658-58986677 None:intergenic 30.0%
GTTCAATATAGGGAAATTCA+AGG - chr3_1:58986805-58986824 Msa0365210:intron 30.0%
ATAGAAACTTCTGTGATTCT+TGG + chr3_1:58986831-58986850 None:intergenic 30.0%
GTATATATTCCAACCTATTG+TGG + chr3_1:58987272-58987291 None:intergenic 30.0%
!! ATAAGCTCTAAAAGAGGAAA+GGG + chr3_1:58987306-58987325 None:intergenic 30.0%
!! TATAAGCTCTAAAAGAGGAA+AGG + chr3_1:58987307-58987326 None:intergenic 30.0%
! CTCCAATTGTAAAGCTATTT+TGG - chr3_1:58987490-58987509 Msa0365210:CDS 30.0%
! CACCAAAATAGCTTTACAAT+TGG + chr3_1:58987495-58987514 None:intergenic 30.0%
!!! ATTGTAAAGCTATTTTGGTG+AGG - chr3_1:58987495-58987514 Msa0365210:CDS 30.0%
! AGTAAGAGTTTCTTGTTTCT+CGG - chr3_1:58987801-58987820 Msa0365210:CDS 30.0%
AATAACAGTGAAGCTCATTT+CGG - chr3_1:58987899-58987918 Msa0365210:intron 30.0%
AAATCCTAGTAAAATGGAGA+CGG + chr3_1:58988020-58988039 None:intergenic 30.0%
CTGACAAAATCCTAGTAAAA+TGG + chr3_1:58988026-58988045 None:intergenic 30.0%
! TAGGATTTTGTCAGAAATGA+AGG - chr3_1:58988032-58988051 Msa0365210:intron 30.0%
!! TTTTCTAGTCAGTTAACAGT+TGG + chr3_1:58988439-58988458 None:intergenic 30.0%
TAACTGACTAGAAAAACTTC+AGG - chr3_1:58988444-58988463 Msa0365210:intron 30.0%
AGACAAAACCATAGAAAAAG+GGG + chr3_1:58988951-58988970 None:intergenic 30.0%
GAGACAAAACCATAGAAAAA+GGG + chr3_1:58988952-58988971 None:intergenic 30.0%
TGAGACAAAACCATAGAAAA+AGG + chr3_1:58988953-58988972 None:intergenic 30.0%
ATCTAGAAGTAATCCAGTTA+TGG - chr3_1:58989023-58989042 Msa0365210:intron 30.0%
AAACAGAAACTAACCATAAC+TGG + chr3_1:58989039-58989058 None:intergenic 30.0%
TTATCTTGTCAACAATTGCT+AGG - chr3_1:58989150-58989169 Msa0365210:CDS 30.0%
! AGTTTTTCTCAATACTCCAA+AGG - chr3_1:58989310-58989329 Msa0365210:intron 30.0%
CCTTGAATATGATTAACCTT+TGG + chr3_1:58989329-58989348 None:intergenic 30.0%
CCAAAGGTTAATCATATTCA+AGG - chr3_1:58989326-58989345 Msa0365210:intron 30.0%
CTCACTATGATCTCATTATA+AGG - chr3_1:58989355-58989374 Msa0365210:intron 30.0%
! AAGAAGCGTATAGAAGAAAA+CGG - chr3_1:58989459-58989478 Msa0365210:intron 30.0%
!!! TTCATTTTGAGTTTCATCCA+CGG + chr3_1:58989487-58989506 None:intergenic 30.0%
TGAAACTCAAAATGAAAACC+TGG - chr3_1:58989491-58989510 Msa0365210:CDS 30.0%
AGTTTGCAGAATATAGCAAT+AGG + chr3_1:58989691-58989710 None:intergenic 30.0%
! GAATGAACCTGATATTTTCT+GGG - chr3_1:58989931-58989950 Msa0365210:intron 30.0%
! ACTTGGTTTAGAATTATCGT+CGG - chr3_1:58990087-58990106 Msa0365210:CDS 30.0%
TGTTTCTCACGCAAATTTAT+TGG - chr3_1:58990137-58990156 Msa0365210:CDS 30.0%
ATTTATTGGAACTTCAACTC+AGG - chr3_1:58990151-58990170 Msa0365210:CDS 30.0%
TGAATTCGGTTAATTCAATG+TGG - chr3_1:58990232-58990251 Msa0365210:intron 30.0%
TCACCTGAAATATTACATCA+AGG + chr3_1:58990258-58990277 None:intergenic 30.0%
AGAGATATACAATTATACGC+AGG - chr3_1:58990279-58990298 Msa0365210:intron 30.0%
GCCAAAGAGAGATTTATATT+TGG - chr3_1:58990338-58990357 Msa0365210:CDS 30.0%
CCCAAATATAAATCTCTCTT+TGG + chr3_1:58990342-58990361 None:intergenic 30.0%
AGAGAGATTTATATTTGGGT+TGG - chr3_1:58990343-58990362 Msa0365210:CDS 30.0%
ATGCAAGTTTCAATGTAGTA+TGG - chr3_1:58990548-58990567 Msa0365210:intron 30.0%
! AAAATATGGTTTTCTTCCCA+TGG - chr3_1:58990592-58990611 Msa0365210:intron 30.0%
AGTCCCTATTTATGTTGTAA+TGG - chr3_1:58990675-58990694 Msa0365210:intron 30.0%
CCTTCCATTACAACATAAAT+AGG + chr3_1:58990682-58990701 None:intergenic 30.0%
! CCTATTTATGTTGTAATGGA+AGG - chr3_1:58990679-58990698 Msa0365210:intron 30.0%
AAGAAACAAGTGAAAAATGG+CGG + chr3_1:58990712-58990731 None:intergenic 30.0%
!! TTTTCACTTGTTTCTTTTCG+TGG - chr3_1:58990716-58990735 Msa0365210:CDS 30.0%
!! TTTCACTTGTTTCTTTTCGT+GGG - chr3_1:58990717-58990736 Msa0365210:CDS 30.0%
TCGGTATTTATAACTTCGAA+CGG + chr3_1:58990771-58990790 None:intergenic 30.0%
ATCCATCTTGTTAAGTATGT+TGG - chr3_1:58990846-58990865 Msa0365210:intron 30.0%
ATCCAACATACTTAACAAGA+TGG + chr3_1:58990851-58990870 None:intergenic 30.0%
ATGGTATTGTTGCAGATTAT+TGG - chr3_1:58990874-58990893 Msa0365210:CDS 30.0%
TAAGCTAAAACAGCTTATGA+TGG + chr3_1:58991262-58991281 None:intergenic 30.0%
CATCAATTTAACCAAAAGAG+AGG - chr3_1:58991666-58991685 Msa0365210:intron 30.0%
! TTAAGGAATTACCTCTCTTT+TGG + chr3_1:58991680-58991699 None:intergenic 30.0%
CTGCTAGGTTTATTTAGTTA+AGG + chr3_1:58991697-58991716 None:intergenic 30.0%
! AATTTTTCATGGAACTCTTC+AGG + chr3_1:58991795-58991814 None:intergenic 30.0%
GAAGAGTTCCATGAAAAATT+TGG - chr3_1:58991795-58991814 Msa0365210:intron 30.0%
! TTGGCATTCCAAATTTTTCA+TGG + chr3_1:58991806-58991825 None:intergenic 30.0%
! AGTTTGTAGAAAGCAGATTT+TGG + chr3_1:58991825-58991844 None:intergenic 30.0%
! ACATATTTGCATGTGTTTTC+TGG - chr3_1:58991911-58991930 Msa0365210:intron 30.0%
TATAACATATGCAAGGTTTG+GGG - chr3_1:58992117-58992136 Msa0365210:intron 30.0%
!!! ACATTTTTTTTATGGTAGCC+GGG + chr3_1:58992150-58992169 None:intergenic 30.0%
!!! CACATTTTTTTTATGGTAGC+CGG + chr3_1:58992151-58992170 None:intergenic 30.0%
ACCATTCTTGCTTTACTATG+TGG - chr3_1:58984970-58984989 Msa0365210:three_prime_UTR 35.0%
TGGTTCAACAAAAACTGAGA+AGG + chr3_1:58985087-58985106 None:intergenic 35.0%
! TCTCAGTTTTTGTTGAACCA+AGG - chr3_1:58985087-58985106 Msa0365210:three_prime_UTR 35.0%
!! AATATCTACATGGCCTTGTT+TGG + chr3_1:58985545-58985564 None:intergenic 35.0%
ATGACAGAACTGTCATCAAT+TGG - chr3_1:58985757-58985776 Msa0365210:intron 35.0%
! GTATTTTACAGTCAAGTAGC+CGG - chr3_1:58985805-58985824 Msa0365210:intron 35.0%
TATTCTGCAATCCAGGATTA+AGG + chr3_1:58985953-58985972 None:intergenic 35.0%
ACTTGATTATTCTGCAATCC+AGG + chr3_1:58985960-58985979 None:intergenic 35.0%
AATTGCCTTACAAGTTGTGT+CGG - chr3_1:58986100-58986119 Msa0365210:intron 35.0%
AGAGTACAAAGCAGAAAACT+TGG + chr3_1:58986294-58986313 None:intergenic 35.0%
GACCTTCGAAAATTCTATAC+CGG - chr3_1:58986386-58986405 Msa0365210:intron 35.0%
! TTCCGGTATAGAATTTTCGA+AGG + chr3_1:58986391-58986410 None:intergenic 35.0%
ATAGGTTTAAGAGGATCAAC+AGG + chr3_1:58986458-58986477 None:intergenic 35.0%
CGAGATCAATGACATTTCAT+AGG + chr3_1:58986476-58986495 None:intergenic 35.0%
! TCTCCGCATGAAAAGTTTTT+AGG - chr3_1:58986652-58986671 Msa0365210:intron 35.0%
CCTTCAATCGGTATTAAACA+AGG + chr3_1:58986865-58986884 None:intergenic 35.0%
! CCTTGTTTAATACCGATTGA+AGG - chr3_1:58986862-58986881 Msa0365210:intron 35.0%
GAAGTAAACACTCCTTCAAT+CGG + chr3_1:58986877-58986896 None:intergenic 35.0%
GAGTGTTTACTTCAAAGCAA+GGG - chr3_1:58986884-58986903 Msa0365210:CDS 35.0%
TCAAAGCAAGGGAATTTGAA+TGG - chr3_1:58986895-58986914 Msa0365210:CDS 35.0%
! TTTGTTAGGTTCCTTTTCTG+AGG - chr3_1:58987092-58987111 Msa0365210:intron 35.0%
TTCAATGATGACCTCAGAAA+AGG + chr3_1:58987106-58987125 None:intergenic 35.0%
GGAGGTTGTTCAATATATCA+AGG - chr3_1:58987216-58987235 Msa0365210:intron 35.0%
ATCAAGGATAATAAGCATGG+TGG - chr3_1:58987232-58987251 Msa0365210:intron 35.0%
GTAGAGGATGGAAAATTTGT+TGG - chr3_1:58987381-58987400 Msa0365210:intron 35.0%
AAGAGAAATAAAGTGGAGCA+AGG + chr3_1:58987555-58987574 None:intergenic 35.0%
TACATTCAGCAAAGAAATGC+TGG - chr3_1:58987675-58987694 Msa0365210:intron 35.0%
! AAATTTTTGTGTGGATGGGA+AGG - chr3_1:58987734-58987753 Msa0365210:CDS 35.0%
TGTTCTTCTTTCGGTCAATA+AGG + chr3_1:58987764-58987783 None:intergenic 35.0%
TTTGATCGCTGTTCTTCTTT+CGG + chr3_1:58987773-58987792 None:intergenic 35.0%
! GGCATTTTTATCAGAAGGAT+TGG - chr3_1:58988076-58988095 Msa0365210:intron 35.0%
!! GATTGGAAAGTACCAACTTT+AGG - chr3_1:58988093-58988112 Msa0365210:intron 35.0%
TTAGGTCGCACTTTACTAAT+TGG - chr3_1:58988111-58988130 Msa0365210:intron 35.0%
ATAACCCTGATGCTTGAATA+TGG + chr3_1:58988285-58988304 None:intergenic 35.0%
AGTCAGTTAACAGTTGGAAT+AGG + chr3_1:58988433-58988452 None:intergenic 35.0%
! GACTAGAAAAACTTCAGGTT+TGG - chr3_1:58988449-58988468 Msa0365210:intron 35.0%
! ACTGTAAAGTCTTGTGTGTT+CGG + chr3_1:58988512-58988531 None:intergenic 35.0%
GTAGTACAGTATACATTTCC+AGG - chr3_1:58988544-58988563 Msa0365210:intron 35.0%
ATACATTTCCAGGAAATGCA+AGG - chr3_1:58988554-58988573 Msa0365210:intron 35.0%
TACATTTCCAGGAAATGCAA+GGG - chr3_1:58988555-58988574 Msa0365210:intron 35.0%
TTTGTCATTCGTGATGTACA+TGG - chr3_1:58988830-58988849 Msa0365210:intron 35.0%
TAACCTCAATCTCATGTAGT+TGG - chr3_1:58988879-58988898 Msa0365210:intron 35.0%
AATCCAACTACATGAGATTG+AGG + chr3_1:58988885-58988904 None:intergenic 35.0%
CAATCTCATGTAGTTGGATT+AGG - chr3_1:58988885-58988904 Msa0365210:intron 35.0%
!!! TTTCTATGGTTTTGTCTCAC+AGG - chr3_1:58988954-58988973 Msa0365210:CDS 35.0%
!! CATAGTATTGATGTGGGAAA+TGG + chr3_1:58988995-58989014 None:intergenic 35.0%
CATTTCCCACATCAATACTA+TGG - chr3_1:58988993-58989012 Msa0365210:intron 35.0%
!! ATCAGCCATAGTATTGATGT+GGG + chr3_1:58989001-58989020 None:intergenic 35.0%
!! AATCAGCCATAGTATTGATG+TGG + chr3_1:58989002-58989021 None:intergenic 35.0%
! TTTGCATTACATGCGTTTTC+AGG - chr3_1:58989257-58989276 Msa0365210:intron 35.0%
!! TTTTCAGGCTCAAATTCATG+AGG - chr3_1:58989272-58989291 Msa0365210:intron 35.0%
TTTCAGGCTCAAATTCATGA+GGG - chr3_1:58989273-58989292 Msa0365210:intron 35.0%
! AGTATTGAGAAAAACTGAGC+TGG + chr3_1:58989306-58989325 None:intergenic 35.0%
TAAACCATACTTGATCGACT+TGG + chr3_1:58989566-58989585 None:intergenic 35.0%
CCATTCTATCAAGAAGAGTA+TGG + chr3_1:58989761-58989780 None:intergenic 35.0%
CCATACTCTTCTTGATAGAA+TGG - chr3_1:58989758-58989777 Msa0365210:intron 35.0%
TACTCTTCTTGATAGAATGG+TGG - chr3_1:58989761-58989780 Msa0365210:intron 35.0%
! GGAATGAACCTGATATTTTC+TGG - chr3_1:58989930-58989949 Msa0365210:intron 35.0%
! CCTTGAATCTCCTTTTCTTT+TGG + chr3_1:58989983-58990002 None:intergenic 35.0%
CCAAAAGAAAAGGAGATTCA+AGG - chr3_1:58989980-58989999 Msa0365210:intron 35.0%
! TGGCCTTGATGTAATATTTC+AGG - chr3_1:58990252-58990271 Msa0365210:intron 35.0%
!! TATTTGGGTTGGATTGCATT+CGG - chr3_1:58990354-58990373 Msa0365210:CDS 35.0%
CTGCTTATGACAATTTCCAT+GGG + chr3_1:58990611-58990630 None:intergenic 35.0%
TCTGCTTATGACAATTTCCA+TGG + chr3_1:58990612-58990631 None:intergenic 35.0%
AGAAAGCTTGCAATTCTGAA+AGG - chr3_1:58990910-58990929 Msa0365210:CDS 35.0%
! AATTCTGAAAGGAAACTCCA+GGG - chr3_1:58990921-58990940 Msa0365210:CDS 35.0%
ACTATAGGCAATTAGGCAAT+CGG - chr3_1:58991034-58991053 Msa0365210:intron 35.0%
AGATTCTTCAAAGAGCTTCT+TGG + chr3_1:58991085-58991104 None:intergenic 35.0%
! TGTGAAATTTAGGGTCTGTT+TGG - chr3_1:58991154-58991173 Msa0365210:intron 35.0%
TAAACACTTGTGAGACTGTT+TGG - chr3_1:58991206-58991225 Msa0365210:CDS 35.0%
!! GTTGTTTTCGTAAGCTATCT+CGG + chr3_1:58991299-58991318 None:intergenic 35.0%
ATAAGCACTTACATGATACG+TGG - chr3_1:58991381-58991400 Msa0365210:intron 35.0%
! TTTTATCTAACCAAGGACTC+TGG - chr3_1:58991415-58991434 Msa0365210:intron 35.0%
TGTTTGTTCTGCGGAAAAAA+TGG + chr3_1:58991497-58991516 None:intergenic 35.0%
ATGCAAGAAAAATGACTGCT+AGG + chr3_1:58991712-58991731 None:intergenic 35.0%
AGTGCAGATAACAACAGTTA+AGG + chr3_1:58991744-58991763 None:intergenic 35.0%
TGCACTATTGTGACGAAATT+AGG - chr3_1:58991758-58991777 Msa0365210:intron 35.0%
!!! GCTTGTTTTGTTTCCATCTA+GGG + chr3_1:58991848-58991867 None:intergenic 35.0%
!!! AGCTTGTTTTGTTTCCATCT+AGG + chr3_1:58991849-58991868 None:intergenic 35.0%
!! TGTCACTGGATCTATTTTAG+AGG - chr3_1:58991874-58991893 Msa0365210:intron 35.0%
!! ACTGGATCTATTTTAGAGGA+TGG - chr3_1:58991878-58991897 Msa0365210:intron 35.0%
! TGAGCTTAATTCAGTTGGTA+GGG - chr3_1:58992081-58992100 Msa0365210:intron 35.0%
!!! CATTTTTTTTATGGTAGCCG+GGG + chr3_1:58992149-58992168 None:intergenic 35.0%
GCCACATAGTAAAGCAAGAA+TGG + chr3_1:58984974-58984993 None:intergenic 40.0%
ACTTGAGCAGCTTAATGCAT+AGG - chr3_1:58985708-58985727 Msa0365210:CDS 40.0%
GTTCTGTCATGACAACATGA+AGG + chr3_1:58985747-58985766 None:intergenic 40.0%
AATCCAGGATTAAGGTTTGC+AGG + chr3_1:58985945-58985964 None:intergenic 40.0%
!! CAAGTGTTGCTTTAAGTTGG+CGG - chr3_1:58985975-58985994 Msa0365210:intron 40.0%
ATTGCCTTACAAGTTGTGTC+GGG - chr3_1:58986101-58986120 Msa0365210:intron 40.0%
GGGCTAATTCAACTTGCATT+AGG - chr3_1:58986121-58986140 Msa0365210:intron 40.0%
!! TTCTCAGTGGATTGGAAGTT+TGG - chr3_1:58986324-58986343 Msa0365210:CDS 40.0%
GTGTATTGAAAACCAGCAGT+TGG - chr3_1:58986346-58986365 Msa0365210:CDS 40.0%
CAGAACTATGTATGCACTTC+CGG + chr3_1:58986408-58986427 None:intergenic 40.0%
TATATGTTCTCGGAAACAGG+CGG - chr3_1:58986503-58986522 Msa0365210:intron 40.0%
!!! TAATGAGGAGGGCCATTTTT+GGG + chr3_1:58986534-58986553 None:intergenic 40.0%
!! ATAATGAGGAGGGCCATTTT+TGG + chr3_1:58986535-58986554 None:intergenic 40.0%
CATGATCTCTAATGGCTGTA+GGG + chr3_1:58986687-58986706 None:intergenic 40.0%
TCATGATCTCTAATGGCTGT+AGG + chr3_1:58986688-58986707 None:intergenic 40.0%
GTGCAGATCATGATCTCTAA+TGG + chr3_1:58986695-58986714 None:intergenic 40.0%
! TCATGATCTGCACTTTTCAC+CGG - chr3_1:58986702-58986721 Msa0365210:intron 40.0%
ACCTGCAAATACATAACTCC+CGG + chr3_1:58986724-58986743 None:intergenic 40.0%
ATCCTGCAGCGTTCAATATA+GGG - chr3_1:58986795-58986814 Msa0365210:intron 40.0%
! GGAGTGTTTACTTCAAAGCA+AGG - chr3_1:58986883-58986902 Msa0365210:CDS 40.0%
ATTCAGATAACGTGCAGAGA+CGG + chr3_1:58987037-58987056 None:intergenic 40.0%
ACCATTCAAGAAAGAGCCAA+AGG - chr3_1:58987190-58987209 Msa0365210:intron 40.0%
!! ACCTTTGGCTCTTTCTTGAA+TGG + chr3_1:58987194-58987213 None:intergenic 40.0%
TCAAGAAAGAGCCAAAGGTT+TGG - chr3_1:58987195-58987214 Msa0365210:intron 40.0%
TTGAACAACCTCCAAACCTT+TGG + chr3_1:58987209-58987228 None:intergenic 40.0%
TTTGTTGGCGATTCTGATGT+CGG - chr3_1:58987396-58987415 Msa0365210:intron 40.0%
!! GGAGAGTTCTGGAGTTTATT+TGG - chr3_1:58987417-58987436 Msa0365210:intron 40.0%
!! GAGTTCTGGAGTTTATTTGG+TGG - chr3_1:58987420-58987439 Msa0365210:intron 40.0%
! ACTTTTGCTCCTCGATTCTA+AGG - chr3_1:58987587-58987606 Msa0365210:CDS 40.0%
CTCGACAGGATAAATCTACA+GGG - chr3_1:58987628-58987647 Msa0365210:intron 40.0%
CTGAATGTATTGCTTCCAGT+TGG + chr3_1:58987664-58987683 None:intergenic 40.0%
! TTTCTTGTTTCTCGGTCTGA+AGG - chr3_1:58987809-58987828 Msa0365210:CDS 40.0%
! TTCTTGTTTCTCGGTCTGAA+GGG - chr3_1:58987810-58987829 Msa0365210:CDS 40.0%
AAATCCCTGAATGCAATGCT+TGG + chr3_1:58987983-58988002 None:intergenic 40.0%
AAGATCAGACAAGACTCACA+CGG - chr3_1:58988055-58988074 Msa0365210:intron 40.0%
! CACACGGCATTTTTATCAGA+AGG - chr3_1:58988071-58988090 Msa0365210:intron 40.0%
AGTAAAGTGCGACCTAAAGT+TGG + chr3_1:58988108-58988127 None:intergenic 40.0%
! AGCCTAGTCTCAACTGTTTT+AGG + chr3_1:58988137-58988156 None:intergenic 40.0%
TCAGCCATATTCAAGCATCA+GGG - chr3_1:58988278-58988297 Msa0365210:CDS 40.0%
GAAAGAACTTCCTGATGAAG+TGG - chr3_1:58988310-58988329 Msa0365210:intron 40.0%
GTGTTCGGTAACTGAAAGAA+GGG + chr3_1:58988497-58988516 None:intergenic 40.0%
TGTGTTCGGTAACTGAAAGA+AGG + chr3_1:58988498-58988517 None:intergenic 40.0%
GAACACACAAGACTTTACAG+TGG - chr3_1:58988511-58988530 Msa0365210:intron 40.0%
! ACGAGACACTGTTTTATGCT+TGG - chr3_1:58988578-58988597 Msa0365210:intron 40.0%
! ACACTGTTTTATGCTTGGCT+TGG - chr3_1:58988583-58988602 Msa0365210:intron 40.0%
! AAAGTTTTCTGTCTTCCGCT+GGG - chr3_1:58988635-58988654 Msa0365210:intron 40.0%
CAGGTAAAATATCTACCCAG+CGG + chr3_1:58988653-58988672 None:intergenic 40.0%
! ACAAGGTTCCCCTTTTTCTA+TGG - chr3_1:58988940-58988959 Msa0365210:CDS 40.0%
TATAGAAGAAAACGGTACCG+TGG - chr3_1:58989467-58989486 Msa0365210:intron 40.0%
CTGAAGCAGCTATGTATACA+TGG - chr3_1:58989709-58989728 Msa0365210:intron 40.0%
GCAGCTATGTATACATGGAT+TGG - chr3_1:58989714-58989733 Msa0365210:intron 40.0%
TATGGTCTCTTGCTGAAGAA+AGG + chr3_1:58989743-58989762 None:intergenic 40.0%
GGCGGAATATCCAAAAGAAA+AGG - chr3_1:58989970-58989989 Msa0365210:intron 40.0%
ATTATCGTCGGTGAAATGAC+AGG - chr3_1:58990099-58990118 Msa0365210:CDS 40.0%
TTATCGTCGGTGAAATGACA+GGG - chr3_1:58990100-58990119 Msa0365210:CDS 40.0%
GAAATGACAGGGAAAACTGA+TGG - chr3_1:58990111-58990130 Msa0365210:CDS 40.0%
AAACAAGAAGCTCTCAACCT+CGG - chr3_1:58990388-58990407 Msa0365210:CDS 40.0%
CTAGCAAACTTGATCTACGA+AGG + chr3_1:58990441-58990460 None:intergenic 40.0%
GAAATGGATGTCCTTGTTGA+AGG - chr3_1:58990640-58990659 Msa0365210:intron 40.0%
! CAATTCTGAAAGGAAACTCC+AGG - chr3_1:58990920-58990939 Msa0365210:CDS 40.0%
AGCGGTTCTATCATTTCCAA+TGG - chr3_1:58990967-58990986 Msa0365210:intron 40.0%
TTACCAGCACTGTTATTAGC+AGG + chr3_1:58991108-58991127 None:intergenic 40.0%
CAGTGGAATTGTTTGTTCTG+CGG + chr3_1:58991506-58991525 None:intergenic 40.0%
CAGTTCTGTTGCTGAAGAAT+CGG + chr3_1:58991530-58991549 None:intergenic 40.0%
TAAACTTGCAGTCTCGTTTG+AGG + chr3_1:58991557-58991576 None:intergenic 40.0%
GTTAAATTGATGCCTGTCAC+TGG + chr3_1:58991658-58991677 None:intergenic 40.0%
CTTTCTACAAACTCCCTAGA+TGG - chr3_1:58991832-58991851 Msa0365210:intron 40.0%
AAACAAGCTGAAGATGTCAC+TGG - chr3_1:58991860-58991879 Msa0365210:intron 40.0%
GTGAGCTTAATTCAGTTGGT+AGG - chr3_1:58992080-58992099 Msa0365210:intron 40.0%
AGCACATAATGTCGCAATGC+CGG + chr3_1:58985827-58985846 None:intergenic 45.0%
TAGCCTGCAAACCTTAATCC+TGG - chr3_1:58985939-58985958 Msa0365210:intron 45.0%
TTAGCCCGACACAACTTGTA+AGG + chr3_1:58986108-58986127 None:intergenic 45.0%
!!! AATGAGGAGGGCCATTTTTG+GGG + chr3_1:58986533-58986552 None:intergenic 45.0%
GCTGGGAAATGACACAAAGA+AGG - chr3_1:58986569-58986588 Msa0365210:CDS 45.0%
! CATGATCTGCACTTTTCACC+GGG - chr3_1:58986703-58986722 Msa0365210:intron 45.0%
ACCGGGAGTTATGTATTTGC+AGG - chr3_1:58986720-58986739 Msa0365210:intron 45.0%
GGGAGTTATGTATTTGCAGG+TGG - chr3_1:58986723-58986742 Msa0365210:intron 45.0%
! TTTGCAGGTGGATTCAACCT+TGG - chr3_1:58986735-58986754 Msa0365210:intron 45.0%
TTCAACCTTGGCATCAGACA+AGG - chr3_1:58986747-58986766 Msa0365210:intron 45.0%
! ATCAGACAAGGCACTTGAGT+TGG - chr3_1:58986759-58986778 Msa0365210:intron 45.0%
GATCCTGCAGCGTTCAATAT+AGG - chr3_1:58986794-58986813 Msa0365210:intron 45.0%
TTCCCTATATTGAACGCTGC+AGG + chr3_1:58986800-58986819 None:intergenic 45.0%
TACATGTGTACAGGCTGACT+TGG + chr3_1:58986927-58986946 None:intergenic 45.0%
AGTCAGCCTGTACACATGTA+AGG - chr3_1:58986927-58986946 Msa0365210:CDS 45.0%
GTCAGCCTGTACACATGTAA+GGG - chr3_1:58986928-58986947 Msa0365210:CDS 45.0%
AGTCTCCCTTACATGTGTAC+AGG + chr3_1:58986936-58986955 None:intergenic 45.0%
CTATGTTGTCCACGTGAAAG+AGG - chr3_1:58986954-58986973 Msa0365210:CDS 45.0%
TTCAGATAACGTGCAGAGAC+GGG + chr3_1:58987036-58987055 None:intergenic 45.0%
AGAAAGAGCCAAAGGTTTGG+AGG - chr3_1:58987198-58987217 Msa0365210:intron 45.0%
! TAAGCATGGTGGAAAATGCG+AGG - chr3_1:58987243-58987262 Msa0365210:CDS 45.0%
ATTCTGATGTCGGAGAGTTC+TGG - chr3_1:58987406-58987425 Msa0365210:intron 45.0%
ACAGATTCCTGACTAGAAGG+CGG + chr3_1:58987468-58987487 None:intergenic 45.0%
ACAACTGCTCCTTAGAATCG+AGG + chr3_1:58987599-58987618 None:intergenic 45.0%
CCTGTAGATTTATCCTGTCG+AGG + chr3_1:58987630-58987649 None:intergenic 45.0%
CCTCGACAGGATAAATCTAC+AGG - chr3_1:58987627-58987646 Msa0365210:intron 45.0%
CAGGGAAAACTTTGTCCAAC+TGG - chr3_1:58987646-58987665 Msa0365210:intron 45.0%
TCCTAGTAAAATGGAGACGG+TGG + chr3_1:58988017-58988036 None:intergenic 45.0%
GGCCTAAAACAGTTGAGACT+AGG - chr3_1:58988132-58988151 Msa0365210:intron 45.0%
GAGACTAGGCTTTACGAAGA+AGG - chr3_1:58988146-58988165 Msa0365210:intron 45.0%
CGAAGAAGGACGAGAAAAAG+TGG - chr3_1:58988160-58988179 Msa0365210:intron 45.0%
GCTTGAATATGGCTGAGACA+GGG + chr3_1:58988274-58988293 None:intergenic 45.0%
TGCTTGAATATGGCTGAGAC+AGG + chr3_1:58988275-58988294 None:intergenic 45.0%
CTCAGCCATATTCAAGCATC+AGG - chr3_1:58988277-58988296 Msa0365210:CDS 45.0%
GCTTGGCAGTAGATGTGTAA+TGG - chr3_1:58988600-58988619 Msa0365210:intron 45.0%
GGCAGTAGATGTGTAATGGT+AGG - chr3_1:58988604-58988623 Msa0365210:intron 45.0%
! CAAAGTTTTCTGTCTTCCGC+TGG - chr3_1:58988634-58988653 Msa0365210:intron 45.0%
!!! CTATGGTTTTGTCTCACAGG+AGG - chr3_1:58988957-58988976 Msa0365210:CDS 45.0%
TTTAAGGGGGGAAACAGTTC+AGG - chr3_1:58989432-58989451 Msa0365210:intron 45.0%
!! GTAGCACTGTTTCGAGTTCA+AGG - chr3_1:58989513-58989532 Msa0365210:CDS 45.0%
!! CCATACTTGATCGACTTGGA+TGG + chr3_1:58989562-58989581 None:intergenic 45.0%
CCATCCAAGTCGATCAAGTA+TGG - chr3_1:58989559-58989578 Msa0365210:CDS 45.0%
ACAGATACAGGTAGCTGTGT+CGG + chr3_1:58989902-58989921 None:intergenic 45.0%
ACAGCTACCTGTATCTGTGA+GGG - chr3_1:58989904-58989923 Msa0365210:intron 45.0%
TACCTGTATCTGTGAGGGAA+GGG - chr3_1:58989909-58989928 Msa0365210:intron 45.0%
CTTCAACTCAGGAGACTTCA+AGG - chr3_1:58990162-58990181 Msa0365210:intron 45.0%
GCAAACTTGATCTACGAAGG+TGG + chr3_1:58990438-58990457 None:intergenic 45.0%
CTAGCGATAAGCCTTCAACA+AGG + chr3_1:58990654-58990673 None:intergenic 45.0%
!! AACCGCTTTTGTGACCGTTA+GGG + chr3_1:58990954-58990973 None:intergenic 45.0%
GAGGTGAACTACTTCTTCGA+CGG + chr3_1:58990993-58991012 None:intergenic 45.0%
GAAGTAGTTCACCTCTACCT+AGG - chr3_1:58990998-58991017 Msa0365210:intron 45.0%
GGCTCAGACTATAGGCAATT+AGG - chr3_1:58991027-58991046 Msa0365210:intron 45.0%
!!! TTTTTCAAGCCCTACTCCAG+CGG - chr3_1:58991059-58991078 Msa0365210:intron 45.0%
TCTCCTGCTAATAACAGTGC+TGG - chr3_1:58991102-58991121 Msa0365210:intron 45.0%
! ACTCTGGAGAGTTCGCTAAT+TGG - chr3_1:58991431-58991450 Msa0365210:intron 45.0%
TTGATGCCTGTCACTGGATT+CGG + chr3_1:58991652-58991671 None:intergenic 45.0%
GCATGCATAATACACTCACG+AGG + chr3_1:58991982-58992001 None:intergenic 45.0%
CCAACTGAATTAAGCTCACG+AGG + chr3_1:58992079-58992098 None:intergenic 45.0%
CCTCGTGAGCTTAATTCAGT+TGG - chr3_1:58992076-58992095 Msa0365210:intron 45.0%
! AAGGTTTGGGGTTTAAACCC+CGG - chr3_1:58992129-58992148 Msa0365210:intron 45.0%
CTGAAACTGGAACCAACTGC+TGG + chr3_1:58986361-58986380 None:intergenic 50.0%
!! CGAAGGTCTGACTCTGAAAC+TGG + chr3_1:58986374-58986393 None:intergenic 50.0%
! CAGGCGGTTTTCCCCAAAAA+TGG - chr3_1:58986519-58986538 Msa0365210:intron 50.0%
AAGTGCCTTGTCTGATGCCA+AGG + chr3_1:58986755-58986774 None:intergenic 50.0%
!! CTTGAGTTGGATGCAGCCTT+AGG - chr3_1:58986772-58986791 Msa0365210:intron 50.0%
TTGAACGCTGCAGGATCCTA+AGG + chr3_1:58986791-58986810 None:intergenic 50.0%
CACAACTCACCTCTTTCACG+TGG + chr3_1:58986966-58986985 None:intergenic 50.0%
AAATGCGAGGTGGCCACAAT+AGG - chr3_1:58987256-58987275 Msa0365210:CDS 50.0%
CAGATTCCTGACTAGAAGGC+GGG + chr3_1:58987467-58987486 None:intergenic 50.0%
GCCTTCTAGTCAGGAATCTG+TGG - chr3_1:58987467-58987486 Msa0365210:intron 50.0%
GCCACAGATTCCTGACTAGA+AGG + chr3_1:58987471-58987490 None:intergenic 50.0%
! GTTGTTGTCACTTCCTCGAC+AGG - chr3_1:58987614-58987633 Msa0365210:intron 50.0%
! TGTCGCCAAGCATTGCATTC+AGG - chr3_1:58987975-58987994 Msa0365210:CDS 50.0%
! GTCGCCAAGCATTGCATTCA+GGG - chr3_1:58987976-58987995 Msa0365210:CDS 50.0%
! GCCACCGTCTCCATTTTACT+AGG - chr3_1:58988013-58988032 Msa0365210:intron 50.0%
GAAGGACGAGAAAAAGTGGC+AGG - chr3_1:58988164-58988183 Msa0365210:intron 50.0%
GGCTCATCATCCACTTCATC+AGG + chr3_1:58988323-58988342 None:intergenic 50.0%
GAGCCATCTATAGATCGCAG+CGG - chr3_1:58988338-58988357 Msa0365210:intron 50.0%
GGCTCAAATTCATGAGGGCA+AGG - chr3_1:58989278-58989297 Msa0365210:intron 50.0%
GAACTCGAAACAGTGCTACC+AGG + chr3_1:58989512-58989531 None:intergenic 50.0%
CACAGCTACCTGTATCTGTG+AGG - chr3_1:58989903-58989922 Msa0365210:intron 50.0%
CTACCTGTATCTGTGAGGGA+AGG - chr3_1:58989908-58989927 Msa0365210:intron 50.0%
TTCCCTTCCCTCACAGATAC+AGG + chr3_1:58989914-58989933 None:intergenic 50.0%
ACCCCTAACGGTCACAAAAG+CGG - chr3_1:58990949-58990968 Msa0365210:intron 50.0%
!! ACCGCTTTTGTGACCGTTAG+GGG + chr3_1:58990953-58990972 None:intergenic 50.0%
!! GAACCGCTTTTGTGACCGTT+AGG + chr3_1:58990955-58990974 None:intergenic 50.0%
ACTACTTCTTCGACGGCCAT+TGG + chr3_1:58990986-58991005 None:intergenic 50.0%
AAGCTATCTCGGAGAGCTTG+TGG + chr3_1:58991288-58991307 None:intergenic 50.0%
GTTGCTGAAGAATCGGACAG+TGG + chr3_1:58991523-58991542 None:intergenic 50.0%
CCACTCGAAGTTGCTCGTAA+GGG + chr3_1:58991624-58991643 None:intergenic 50.0%
ACCACTCGAAGTTGCTCGTA+AGG + chr3_1:58991625-58991644 None:intergenic 50.0%
GTTTCTCCGAATCCAGTGAC+AGG - chr3_1:58991643-58991662 Msa0365210:intron 50.0%
GATCCCGCATTCCAAACTGC+AGG - chr3_1:58986043-58986062 Msa0365210:intron 55.0%
! GCTCCTGCAGTTTGGAATGC+GGG + chr3_1:58986049-58986068 None:intergenic 55.0%
! CGCTCCTGCAGTTTGGAATG+CGG + chr3_1:58986050-58986069 None:intergenic 55.0%
ACGGATTCGCTCCTGCAGTT+TGG + chr3_1:58986057-58986076 None:intergenic 55.0%
! GCATGGTGGAAAATGCGAGG+TGG - chr3_1:58987246-58987265 Msa0365210:CDS 55.0%
! GTGCCGCTGCGATCTATAGA+TGG + chr3_1:58988344-58988363 None:intergenic 55.0%
! CTTCAGGTTTGGCGAGTCGA+TGG - chr3_1:58988460-58988479 Msa0365210:intron 55.0%
GTCTCGTCCCTTGCATTTCC+TGG + chr3_1:58988565-58988584 None:intergenic 55.0%
AGAAGCTCTCAACCTCGGCT+TGG - chr3_1:58990393-58990412 Msa0365210:CDS 55.0%
GCAGACAACTTACCAAGCCG+AGG + chr3_1:58990408-58990427 None:intergenic 55.0%
TCCAGGGACTCTACCCCTAA+CGG - chr3_1:58990937-58990956 Msa0365210:intron 55.0%
! TCACCTCTACCTAGGAGTGC+AGG - chr3_1:58991006-58991025 Msa0365210:intron 55.0%
TAGTCTGAGCCTGCACTCCT+AGG + chr3_1:58991018-58991037 None:intergenic 55.0%
GGAGTGCAGGCTCAGACTAT+AGG - chr3_1:58991019-58991038 Msa0365210:intron 55.0%
TCAAAGAGCTTCTTGGCCGC+TGG + chr3_1:58991078-58991097 None:intergenic 55.0%
AGCGAACTCTCCAGAGTCCT+TGG + chr3_1:58991428-58991447 None:intergenic 55.0%
CCCTTACGAGCAACTTCGAG+TGG - chr3_1:58991621-58991640 Msa0365210:intron 55.0%
GCGAGGTGGCCACAATAGGT+TGG - chr3_1:58987260-58987279 Msa0365210:CDS 60.0%
GAAGGCGGGTCTCGAGGAAT+TGG + chr3_1:58987453-58987472 None:intergenic 60.0%
TGACTAGAAGGCGGGTCTCG+AGG + chr3_1:58987459-58987478 None:intergenic 60.0%
TCGAGACCCGCCTTCTAGTC+AGG - chr3_1:58987458-58987477 Msa0365210:intron 60.0%
ACCGTTAGGGGTAGAGTCCC+TGG + chr3_1:58990941-58990960 None:intergenic 60.0%
GAGCCTGCACTCCTAGGTAG+AGG + chr3_1:58991012-58991031 None:intergenic 60.0%
GCTTCTTGGCCGCTGGAGTA+GGG + chr3_1:58991071-58991090 None:intergenic 60.0%
AGCTTCTTGGCCGCTGGAGT+AGG + chr3_1:58991072-58991091 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 58984958 58992321 58984958 ID=Msa0365210;Name=Msa0365210
chr3_1 mRNA 58984958 58992321 58984958 ID=Msa0365210-mRNA-1;Parent=Msa0365210;Name=Msa0365210-mRNA-1;_AED=0.18;_eAED=0.18;_QI=201|1|1|1|0.86|0.79|24|307|894
chr3_1 exon 58984958 58985116 58984958 ID=Msa0365210-mRNA-1:exon:11288;Parent=Msa0365210-mRNA-1
chr3_1 exon 58985218 58985346 58985218 ID=Msa0365210-mRNA-1:exon:11287;Parent=Msa0365210-mRNA-1
chr3_1 exon 58985367 58985499 58985367 ID=Msa0365210-mRNA-1:exon:11286;Parent=Msa0365210-mRNA-1
chr3_1 exon 58985592 58985770 58985592 ID=Msa0365210-mRNA-1:exon:11285;Parent=Msa0365210-mRNA-1
chr3_1 exon 58986156 58986390 58986156 ID=Msa0365210-mRNA-1:exon:11284;Parent=Msa0365210-mRNA-1
chr3_1 exon 58986523 58986648 58986523 ID=Msa0365210-mRNA-1:exon:11283;Parent=Msa0365210-mRNA-1
chr3_1 exon 58986865 58987005 58986865 ID=Msa0365210-mRNA-1:exon:11282;Parent=Msa0365210-mRNA-1
chr3_1 exon 58987096 58987106 58987096 ID=Msa0365210-mRNA-1:exon:11281;Parent=Msa0365210-mRNA-1
chr3_1 exon 58987233 58987380 58987233 ID=Msa0365210-mRNA-1:exon:11280;Parent=Msa0365210-mRNA-1
chr3_1 exon 58987485 58987613 58987485 ID=Msa0365210-mRNA-1:exon:11279;Parent=Msa0365210-mRNA-1
chr3_1 exon 58987704 58987841 58987704 ID=Msa0365210-mRNA-1:exon:11278;Parent=Msa0365210-mRNA-1
chr3_1 exon 58987932 58988000 58987932 ID=Msa0365210-mRNA-1:exon:11277;Parent=Msa0365210-mRNA-1
chr3_1 exon 58988235 58988303 58988235 ID=Msa0365210-mRNA-1:exon:11276;Parent=Msa0365210-mRNA-1
chr3_1 exon 58988658 58988813 58988658 ID=Msa0365210-mRNA-1:exon:11275;Parent=Msa0365210-mRNA-1
chr3_1 exon 58988909 58988997 58988909 ID=Msa0365210-mRNA-1:exon:11274;Parent=Msa0365210-mRNA-1
chr3_1 exon 58989094 58989244 58989094 ID=Msa0365210-mRNA-1:exon:11273;Parent=Msa0365210-mRNA-1
chr3_1 exon 58989478 58989643 58989478 ID=Msa0365210-mRNA-1:exon:11272;Parent=Msa0365210-mRNA-1
chr3_1 exon 58989768 58989894 58989768 ID=Msa0365210-mRNA-1:exon:11271;Parent=Msa0365210-mRNA-1
chr3_1 exon 58990002 58990179 58990002 ID=Msa0365210-mRNA-1:exon:11270;Parent=Msa0365210-mRNA-1
chr3_1 exon 58990304 58990537 58990304 ID=Msa0365210-mRNA-1:exon:11269;Parent=Msa0365210-mRNA-1
chr3_1 exon 58990689 58990757 58990689 ID=Msa0365210-mRNA-1:exon:11268;Parent=Msa0365210-mRNA-1
chr3_1 exon 58990849 58990948 58990849 ID=Msa0365210-mRNA-1:exon:11267;Parent=Msa0365210-mRNA-1
chr3_1 exon 58991205 58991310 58991205 ID=Msa0365210-mRNA-1:exon:11266;Parent=Msa0365210-mRNA-1
chr3_1 exon 58992171 58992321 58992171 ID=Msa0365210-mRNA-1:exon:11265;Parent=Msa0365210-mRNA-1
chr3_1 five_prime_UTR 58992171 58992321 58992171 ID=Msa0365210-mRNA-1:five_prime_utr;Parent=Msa0365210-mRNA-1
chr3_1 five_prime_UTR 58991261 58991310 58991261 ID=Msa0365210-mRNA-1:five_prime_utr;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58991205 58991260 58991205 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58990849 58990948 58990849 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58990689 58990757 58990689 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58990304 58990537 58990304 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58990002 58990179 58990002 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58989768 58989894 58989768 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58989478 58989643 58989478 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58989094 58989244 58989094 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58988909 58988997 58988909 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58988658 58988813 58988658 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58988235 58988303 58988235 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58987932 58988000 58987932 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58987704 58987841 58987704 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58987485 58987613 58987485 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58987233 58987380 58987233 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58987096 58987106 58987096 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58986865 58987005 58986865 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58986523 58986648 58986523 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58986156 58986390 58986156 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58985592 58985770 58985592 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 CDS 58985386 58985499 58985386 ID=Msa0365210-mRNA-1:cds;Parent=Msa0365210-mRNA-1
chr3_1 three_prime_UTR 58985367 58985385 58985367 ID=Msa0365210-mRNA-1:three_prime_utr;Parent=Msa0365210-mRNA-1
chr3_1 three_prime_UTR 58985218 58985346 58985218 ID=Msa0365210-mRNA-1:three_prime_utr;Parent=Msa0365210-mRNA-1
chr3_1 three_prime_UTR 58984958 58985116 58984958 ID=Msa0365210-mRNA-1:three_prime_utr;Parent=Msa0365210-mRNA-1
Gene Sequence

>Msa0365210

ATGCCTATTATCAATAAAGACTTGGATCCCGCATTCCAAACTGCAGGAGCGAATCCTGGATTGGAAGTTTGGTGTATTGAAAACCAGCAGTTGGTTCCAGTTTCAGAGTCAGACCTTCGAAAATTCTATACCGGAAGTGCATACATAGTTCTGAATGCGGTTTTCCCCAAAAATGGCCCTCCTCATTATGACATTCATTATTGGCTGGGAAATGACACAAAGAAGGTGGATTCAACCTTGGCATCAGACAAGGCACTTGAGTTGGATGCAGCCTTAGGATCCTGCAGCGTTCAATATAGGGAAATTCAAGGCCAAGAATCACAGAAGTTTCTATCATACTTCAAGCCTTGTTTAATACCGATTGAAGGAGTGTTTACTTCAAAGCAAGGGAATTTGAATGGCGAATACCAAGTCAGCCTGTACACATGTAAGGGAGACTATGTTGTCCACGTGAAAGAGGTTCCTTTTCTGAGGTCATCATTGAATCATGAAGATGTATTCATACTTGACACTGCATTAAAAATCTTTCTCTTCAGTGGATGCAACTCTACCATTCAAGAAAGAGCCAAAGGTTTGGAGGTTGTTCAATATATCAAGGATAATAAGCATGGTGGAAAATGCGAGGTGGCCACAATAGAGGATGGAAAATTTGTTGGCGATTCTGATGTCGGAGAGTTCTGGAGTTTATTTGGTGGTTATGCTCCAATTCCTCGAGACCCGCCTTCTAGTCAGGAATCTGTGGCTCCAATTGTAAAGCTATTTTGGATAAATCTACAGGGAAAACTTTGTCCAACTGGAAGCAATACATTCAGCAAAGAAATGCTGGAGTCAGACAAGTGTTATATGTTAGACTGTGATAATGAAATTTTTGTGTGGATGGGAAGGCAGACCTTATTGACCGAAAGAAGAACAGCGATCAAAGCTACAGAAGATTTTGTCAGAAATGAAGGAAGATCAGACAAGACTCACACGGCATTTTTATCAGAAGGATTGGAAAGTACCAACTTTAGGTCGCACTTTACTAATTGGCCTAAAACAGTTGAGACTAGGCTTTACGAAGAAGGACGAGAAAAAGTGGCAGCCATATTCAAGCATCAGGGTTATGATGTGAAAGAACTTCCTGATGAAGTGGATGATGAGCCATCTATAGATCGCAGCGGCACAATAAAAGTTTGGCGAGTCGATGGTGATGAATTGTCCCTTCTTTCAGTTACCGAACACACAAGACTTTACAGTGGAGATTGCTATGTAGTACAGTATACATTTCCAGGAAATGCAAGGGACGAGACACTGTTTTATGCTTGGCTTGGCAGTAGATGTGTAATGGAGGATAAAACAGCTGCCATTTCCCACATCAATACTATGGCTGATTCATCTAGAAGTAATCCAGTTATGGCTCAAATTCATGAGGGCAAGGAGCCAGCTCAGTTTTTCTCAATACTCCAAAGGTTAATCATATTCAAGGGGGGAAACAGTTCAGGATATAAGAAGCGTATAGAAGAAAACGGTACCGTGGATGAAACTCAAAATGAAAACCTGGTAGCACTGTTTCGAGTTCAAGGTACAAGTCAAGATAATATGCAAGCCATCCAAGTCGATCAAGTTTCAAGCTCTCTAAATTCATCCTATTGCTATATTCTGCAAACTGAAGCAGCTATGTATACATGGATTGGAAGCCTTTCTTCAGCAAGAGACCATACTCTTCTTGATAGAATGGTGGAACTACTTAATCCGACACAGCTACCTGTATCTGTGAGGGAAGGGAATGAACCTGATATTTTCTGGGACGTTCTTGGTGGAAAGGCGGAATATCCAAAAGAAAAGGAGATTCAAGGATTCATAGATGATCCACATTTGTTTGCATTGAAAATAACCAAAGGAGACTTCAAGGTGAAAGAGATATACAATTATACGCAGGATGACTTAATTACCGAAGATGTTTTATTGCTTGATTGCCAAAGAGAGATTTATATTTGGGTTGGATTGCATTCGGTCGTCAAATCGAAACAAGAAGCTCTCAACCTCGGCTTGAAATTTTTGGAAATGGATGTCCTTGTTGAAGGCTTATCGCTAGAAGTCCCTATTTATGTTGTAATGGAAGGTTACGAGCCGCCATTTTTCACTTGTTTCTTTTCGTGGGATCATTCAAAAGCAAATATTATTGGTAATTCATTTGAGAGAAAGCTTGCAATTCTGAAAGGAAACTCCAGGGACTCTACCCCTAACGGTCACAAAAGCGGTTCTATCATTTCCAATGGCCGTCGAAGAAGTAGTTCACCTCTACCTAGGAGTGCAGGCTCAGACTATAGGCAATTAGGCAATCGGCTTTTTTCAAGCCCTACTCCAGCGGCCAAGAAGCTCTTTGAAGAATCTCCTGCTAATAACAGTGCTGAACAAACAATTCCACTGTCCGATTCTTCAGCAACAGAACTGAGCTCCTCAAACGAGACTGCAAGTTTAACTGCAAAAGACAAAAATGTCGATGATGAGAGTTTGTCGATATACCCTTACGAGCAACTTCGAGTGGTTTCTCCGAATCCAGTGACAGGCATCAATTTAACCAAAAGAGAGGCATATTTATCTCCTGAAGAGTTCCATGAAAAATTTGGAATGCCAAAATCTGCTTTCTACAAACTCCCTAGATGGAAACAAAACAAGCTGAAGATGTCACTGGATCTATTTTAG
Protein sequence

>Msa0365210

MPIINKDLDPAFQTAGANPGLEVWCIENQQLVPVSESDLRKFYTGSAYIVLNAVFPKNGPPHYDIHYWLGNDTKKVDSTLASDKALELDAALGSCSVQYREIQGQESQKFLSYFKPCLIPIEGVFTSKQGNLNGEYQVSLYTCKGDYVVHVKEVPFLRSSLNHEDVFILDTALKIFLFSGCNSTIQERAKGLEVVQYIKDNKHGGKCEVATIEDGKFVGDSDVGEFWSLFGGYAPIPRDPPSSQESVAPIVKLFWINLQGKLCPTGSNTFSKEMLESDKCYMLDCDNEIFVWMGRQTLLTERRTAIKATEDFVRNEGRSDKTHTAFLSEGLESTNFRSHFTNWPKTVETRLYEEGREKVAAIFKHQGYDVKELPDEVDDEPSIDRSGTIKVWRVDGDELSLLSVTEHTRLYSGDCYVVQYTFPGNARDETLFYAWLGSRCVMEDKTAAISHINTMADSSRSNPVMAQIHEGKEPAQFFSILQRLIIFKGGNSSGYKKRIEENGTVDETQNENLVALFRVQGTSQDNMQAIQVDQVSSSLNSSYCYILQTEAAMYTWIGSLSSARDHTLLDRMVELLNPTQLPVSVREGNEPDIFWDVLGGKAEYPKEKEIQGFIDDPHLFALKITKGDFKVKEIYNYTQDDLITEDVLLLDCQREIYIWVGLHSVVKSKQEALNLGLKFLEMDVLVEGLSLEVPIYVVMEGYEPPFFTCFFSWDHSKANIIGNSFERKLAILKGNSRDSTPNGHKSGSIISNGRRRSSSPLPRSAGSDYRQLGNRLFSSPTPAAKKLFEESPANNSAEQTIPLSDSSATELSSSNETASLTAKDKNVDDESLSIYPYEQLRVVSPNPVTGINLTKREAYLSPEEFHEKFGMPKSAFYKLPRWKQNKLKMSLDLF*