AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1285260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1285260 MtrunA17_Chr8g0359791 96.682 422 14 0 226 647 1 422 0.0 845
Msa1285260 MtrunA17_Chr2g0315531 60.707 481 144 13 201 650 1 467 0.0 528
Msa1285260 MtrunA17_Chr8g0379551 43.103 464 232 8 198 634 14 472 3.30e-116 356
Msa1285260 MtrunA17_Chr4g0011611 41.131 389 212 8 258 636 34 415 1.74e-86 276
Msa1285260 MtrunA17_Chr7g0230481 34.257 397 237 9 256 637 139 526 8.77e-60 209
Msa1285260 MtrunA17_Chr3g0103691 30.488 410 251 11 249 633 77 477 5.48e-47 172
Msa1285260 MtrunA17_Chr5g0432511 32.162 370 216 9 273 635 33 374 2.85e-44 163
Msa1285260 MtrunA17_Chr8g0392321 24.068 295 193 9 364 649 197 469 8.43e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1285260 AT1G53380.2 53.407 455 190 8 198 634 1 451 4.07e-161 470
Msa1285260 AT1G53380.4 53.407 455 190 8 198 634 1 451 4.07e-161 470
Msa1285260 AT1G53380.1 53.407 455 190 8 198 634 1 451 4.07e-161 470
Msa1285260 AT1G53380.3 53.407 455 190 8 198 634 1 451 4.07e-161 470
Msa1285260 AT1G53380.5 53.407 455 190 8 198 634 1 451 4.07e-161 470
Msa1285260 AT3G14870.1 51.266 474 198 11 194 638 1 470 8.70e-155 455
Msa1285260 AT3G14870.3 51.489 470 195 11 198 638 2 467 9.05e-155 455
Msa1285260 AT3G14870.4 51.489 470 195 11 198 638 1 466 9.14e-155 455
Msa1285260 AT3G14870.5 51.489 470 195 11 198 638 1 466 9.14e-155 455
Msa1285260 AT3G14870.2 51.489 470 195 11 198 638 1 466 9.14e-155 455
Msa1285260 AT1G29300.1 41.578 469 225 9 198 634 1 452 1.59e-107 333
Msa1285260 AT2G45260.1 40.103 389 213 8 260 634 37 419 4.27e-85 273
Msa1285260 AT3G60680.1 34.961 389 232 9 261 638 120 498 4.47e-59 206
Msa1285260 AT2G30380.1 34.392 378 202 9 263 635 76 412 2.55e-49 177
Msa1285260 AT4G34080.1 37.132 272 158 5 260 521 13 281 9.93e-47 167
Msa1285260 AT5G58960.2 31.436 404 238 13 260 633 86 480 1.71e-44 166
Msa1285260 AT5G58960.3 31.436 404 238 13 260 633 86 480 1.71e-44 166
Msa1285260 AT5G58960.1 31.436 404 238 13 260 633 161 555 6.85e-44 166
Msa1285260 AT4G33320.1 34.459 296 170 7 242 526 5 287 3.77e-42 154
Msa1285260 AT2G32130.1 45.238 126 67 1 260 385 34 157 1.32e-24 100
Msa1285260 AT4G36100.1 41.935 93 49 2 260 349 13 103 1.84e-14 73.9

Find 129 sgRNAs with CRISPR-Local

Find 462 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAAGAAAATGTTGTTTAT+AGG 0.196054 8_3:+29096128 Msa1285260:CDS
AAGATGGCAAAAGGTGATTT+TGG 0.202616 8_3:-29096334 None:intergenic
TTCGTCTATTCCTGATTTCT+TGG 0.212196 8_3:+29093438 Msa1285260:CDS
AAAGAATGATGCCTCCATTT+TGG 0.219724 8_3:-29096389 None:intergenic
GCTCTTCATCTTCTTCTTCA+TGG 0.223159 8_3:-29095541 None:intergenic
AGCTAAACAATCCCTGTTAT+TGG 0.244219 8_3:-29096986 None:intergenic
CTGCTGCTACCTTTGTTTCA+TGG 0.248535 8_3:-29096754 None:intergenic
CAGGGATTGTTTAGCTGTTA+TGG 0.256879 8_3:+29096993 Msa1285260:three_prime_UTR
AATTGTTGCAGCCGAATTAA+AGG 0.260563 8_3:+29095787 Msa1285260:CDS
TCATTGTGATTATCGAAATA+AGG 0.260665 8_3:-29096220 None:intergenic
CAAGCTGAAATATTTCAAAT+AGG 0.264277 8_3:+29096532 Msa1285260:CDS
TATGGTTGTCCATTTGTATT+TGG 0.277265 8_3:+29096840 Msa1285260:three_prime_UTR
TGCTAGGCCAGATTATTTAC+AGG 0.288657 8_3:+29094371 Msa1285260:CDS
GTTCACTTCATTTGCTGAAA+TGG 0.292950 8_3:+29096462 Msa1285260:CDS
CTGTATATCTGAAACAAATA+AGG 0.310213 8_3:-29088624 None:intergenic
CTTATTTGTTTCAGATATAC+AGG 0.321645 8_3:+29088625 Msa1285260:CDS
AAAATGGAGGCATCATTCTT+TGG 0.328174 8_3:+29096391 Msa1285260:CDS
ATGAATTTGTTCAATTCAAA+AGG 0.333639 8_3:+29097164 Msa1285260:three_prime_UTR
GTTGATATTAGGCCAATAAC+AGG 0.353090 8_3:+29096974 Msa1285260:three_prime_UTR
ACATCATGTTCAACCATTAG+AGG 0.353927 8_3:-29089809 None:intergenic
GTTGCTTTCACTGTAGTTCC+AGG 0.358020 8_3:+29096640 Msa1285260:CDS
AATAGATTACTAACCTTTCA+AGG 0.364053 8_3:-29089855 None:intergenic
GTTTCTTAAAGAGAAGTTAG+AGG 0.364153 8_3:+29095892 Msa1285260:CDS
AAGCTGAAATATTTCAAATA+GGG 0.377206 8_3:+29096533 Msa1285260:CDS
AGAATCGAAGTCGCTTCTTA+AGG 0.377855 8_3:+29095856 Msa1285260:CDS
GAGACTAGTTCACTCCAAAA+TGG 0.381698 8_3:+29096375 Msa1285260:CDS
ACGTATCATCAAACCTCTAA+TGG 0.383111 8_3:+29089796 Msa1285260:CDS
TTATGACCGTGATGGAATTC+AGG 0.383293 8_3:+29095664 Msa1285260:CDS
GTGATTCCCTGTAAATAATC+TGG 0.386481 8_3:-29094378 None:intergenic
AGGTCTTGAGCATTTGCAAT+AGG 0.386745 8_3:+29096878 Msa1285260:three_prime_UTR
ACTCTTCAGCTCCTTTAATT+CGG 0.393760 8_3:-29095798 None:intergenic
CTAGAGTCTCATTCCTCAAC+CGG 0.398338 8_3:-29097270 None:intergenic
GACCCCACAATTATATTCTA+TGG 0.416268 8_3:+29096787 Msa1285260:three_prime_UTR
ATCTGAAACAAATAAGGATT+GGG 0.419389 8_3:-29088618 None:intergenic
TCGAAGCTTTGTGAAGTTGT+TGG 0.425314 8_3:+29096051 Msa1285260:CDS
GAATTCCATCACGGTCATAA+GGG 0.426429 8_3:-29095661 None:intergenic
TGAATTCCATCACGGTCATA+AGG 0.426822 8_3:-29095662 None:intergenic
TTTGGCCATTTGAAAAGAAA+AGG 0.430266 8_3:+29096858 Msa1285260:three_prime_UTR
GGCTGAGAGTTTGAATCAAC+AGG 0.434341 8_3:-29089491 None:intergenic
TTCAAATGGCCAAATACAAA+TGG 0.438247 8_3:-29096849 None:intergenic
TTAGATTAGCAATTAGTGTA+GGG 0.446532 8_3:-29089430 None:intergenic
CATTGTGATTATCGAAATAA+GGG 0.448793 8_3:-29096219 None:intergenic
CACAGAAATGTGCATACATA+TGG 0.454109 8_3:+29094398 Msa1285260:CDS
TATTCTATGGTCTGTGCTGT+GGG 0.456244 8_3:+29096800 Msa1285260:three_prime_UTR
TGCTCGTTCGTACCCGCTGC+AGG 0.458632 8_3:+29088689 Msa1285260:CDS
CTGAAATGGCTAAGAGGGTA+TGG 0.458646 8_3:+29096476 Msa1285260:CDS
TATCTGAAACAAATAAGGAT+TGG 0.460879 8_3:-29088619 None:intergenic
GTCTATTCCTGATTTCTTGG+AGG 0.461566 8_3:+29093441 Msa1285260:CDS
ACTGGAGTTGCACAAGTTGA+TGG 0.474543 8_3:+29095485 Msa1285260:CDS
ATTAGATTAGCAATTAGTGT+AGG 0.474656 8_3:-29089431 None:intergenic
ATACATACCTCCAAGAAATC+AGG 0.476405 8_3:-29093448 None:intergenic
GTGAACAAGTTGTTGTCATC+GGG 0.477261 8_3:-29096445 None:intergenic
CATTTGCTGAAATGGCTAAG+AGG 0.480109 8_3:+29096470 Msa1285260:CDS
GGACTGAGTCAGCTTTGATA+TGG 0.482953 8_3:+29096822 Msa1285260:three_prime_UTR
ATAATAACCCATAAAATCGT+GGG 0.489915 8_3:+29095824 Msa1285260:CDS
GTTTATGAGATGAGATCTGC+TGG 0.490000 8_3:+29096073 Msa1285260:CDS
AAAATAGCAAGGAGTAAAGA+GGG 0.491449 8_3:-29097105 None:intergenic
GTAATAAATGCTAATCAAAT+CGG 0.493035 8_3:+29089398 Msa1285260:CDS
TGAGATGAGATCTGCTGGTT+GGG 0.495349 8_3:+29096078 Msa1285260:CDS
TTGATCGTAATTGGATCCAA+TGG 0.499308 8_3:-29089951 None:intergenic
TAGCTGAGTTAAAGCAATGT+TGG 0.501226 8_3:+29095723 Msa1285260:CDS
TGCTGATAAATTAATAGTCT+CGG 0.502363 8_3:+29095688 Msa1285260:CDS
TGAATTTGTTCAATTCAAAA+GGG 0.504610 8_3:+29097165 Msa1285260:three_prime_UTR
CTTGATAATCTACACATCTC+AGG 0.509716 8_3:+29095977 Msa1285260:CDS
TGTGAAAATAGAGTTTGAAC+GGG 0.512420 8_3:-29089458 None:intergenic
TTGCATATGTTAAAAGTAGT+AGG 0.513422 8_3:+29097032 Msa1285260:three_prime_UTR
ACCCAACAAAAGATGGCAAA+AGG 0.514310 8_3:-29096343 None:intergenic
CAGATTCTCTGATGTATACA+TGG 0.519514 8_3:+29096564 Msa1285260:CDS
ACAATTGCTCCCTCCGGTGA+AGG 0.525485 8_3:-29095770 None:intergenic
GCTGCAACAATTGCTCCCTC+CGG 0.528419 8_3:-29095776 None:intergenic
GACATGAAACAAAGGAATGT+TGG 0.529644 8_3:+29096415 Msa1285260:CDS
ATTTGAAATATTTCAGCTTG+AGG 0.530973 8_3:-29096529 None:intergenic
CACTTGCTGAAATATCCATC+CGG 0.535359 8_3:-29088668 None:intergenic
TTATTATGCAGTTTAATCAA+AGG 0.535844 8_3:+29096934 Msa1285260:three_prime_UTR
GCAGGATGTCATGGATATCA+AGG 0.537116 8_3:+29088707 Msa1285260:CDS
GTGTGAAAATAGAGTTTGAA+CGG 0.537404 8_3:-29089459 None:intergenic
AGACCATAGAATATAATTGT+GGG 0.539227 8_3:-29096790 None:intergenic
ATTTGCTGAAATGGCTAAGA+GGG 0.540204 8_3:+29096471 Msa1285260:CDS
TATAATAACCCATAAAATCG+TGG 0.541558 8_3:+29095823 Msa1285260:CDS
GAAATATTTCAAATAGGGAA+AGG 0.542615 8_3:+29096538 Msa1285260:CDS
TTGGTGTTGCATTCCTTGAA+AGG 0.545951 8_3:+29089842 Msa1285260:CDS
AGTGAACAAGTTGTTGTCAT+CGG 0.555601 8_3:-29096446 None:intergenic
GTACCCGCTGCAGGATGTCA+TGG 0.557692 8_3:+29088698 Msa1285260:CDS
TAGAGTCTCATTCCTCAACC+GGG 0.562885 8_3:-29097269 None:intergenic
TAGATTAGCAATTAGTGTAG+GGG 0.565153 8_3:-29089429 None:intergenic
AGATTAGCAATTAGTGTAGG+GGG 0.566546 8_3:-29089428 None:intergenic
AACAGAACAAGTTAATTGAA+AGG 0.567554 8_3:+29095924 Msa1285260:CDS
ATATTCTATGGTCTGTGCTG+TGG 0.568361 8_3:+29096799 Msa1285260:three_prime_UTR
GTATTTCACCCAACAAAAGA+TGG 0.568758 8_3:-29096350 None:intergenic
CTTCGTGTAAAATCAATGAC+TGG 0.569128 8_3:+29095467 Msa1285260:CDS
ATGAGATGAGATCTGCTGGT+TGG 0.569372 8_3:+29096077 Msa1285260:CDS
CAAGGAATGCAACACCAACA+TGG 0.573573 8_3:-29089837 None:intergenic
TTGATTCAAACTCTCAGCCG+TGG 0.573871 8_3:+29089495 Msa1285260:CDS
TTTGTTTCAGATATACAGGA+TGG 0.576115 8_3:+29088629 Msa1285260:CDS
CAGACCATAGAATATAATTG+TGG 0.585506 8_3:-29096791 None:intergenic
ACATTGCTTTAACTCAGCTA+AGG 0.585709 8_3:-29095720 None:intergenic
TATCCATGACATCCTGCAGC+GGG 0.597572 8_3:-29088701 None:intergenic
TCTTAAAGAGAAGTTAGAGG+AGG 0.599840 8_3:+29095895 Msa1285260:CDS
AATTCCATCACGGTCATAAG+GGG 0.601774 8_3:-29095660 None:intergenic
CGAGCTAGTTTACTCTTGTG+TGG 0.604460 8_3:-29095428 None:intergenic
GAAAGGAGGTTAAATCAAAG+TGG 0.604775 8_3:+29095941 Msa1285260:CDS
AAATAATCTGGCCTAGCAGT+AGG 0.609326 8_3:-29094366 None:intergenic
AGAACAAGTTAATTGAAAGG+AGG 0.617633 8_3:+29095927 Msa1285260:CDS
CACATATGAGTCCTACTGCT+AGG 0.620124 8_3:+29094355 Msa1285260:CDS
GTTAAAATCAGTGAATGCAA+AGG 0.621096 8_3:+29096294 Msa1285260:CDS
GAATCCCCTTATGACCGTGA+TGG 0.621817 8_3:+29095656 Msa1285260:CDS
ATGTCACTTCCATGAAACAA+AGG 0.627933 8_3:+29096745 Msa1285260:exon
AGTAATTTAGAGTTTGATCG+AGG 0.628059 8_3:+29097291 Msa1285260:three_prime_UTR
GCTAGGCCAGATTATTTACA+GGG 0.631379 8_3:+29094372 Msa1285260:CDS
TGTATCTGCTCTTCGCCACG+CGG 0.634055 8_3:+29096018 Msa1285260:CDS
AGAGCAGATACAAAGTGTGT+AGG 0.634931 8_3:-29096007 None:intergenic
GATCAAAATTGTCTGTGTGA+AGG 0.635221 8_3:+29089968 Msa1285260:CDS
TGATTCAAACTCTCAGCCGT+GGG 0.643097 8_3:+29089496 Msa1285260:CDS
GACCATAGAATATAATTGTG+GGG 0.649201 8_3:-29096789 None:intergenic
TTGATATTAGGCCAATAACA+GGG 0.651790 8_3:+29096975 Msa1285260:three_prime_UTR
TCTTTGGTGACATGAAACAA+AGG 0.654420 8_3:+29096407 Msa1285260:CDS
AAACATTCTGAAGAAAAGGA+CGG 0.658975 8_3:-29096903 None:intergenic
TGTGATTATCGAAATAAGGG+AGG 0.664917 8_3:-29096216 None:intergenic
TAATAACCCATAAAATCGTG+GGG 0.666198 8_3:+29095825 Msa1285260:CDS
CATATGTTAAAAGTAGTAGG+TGG 0.670267 8_3:+29097035 Msa1285260:three_prime_UTR
CAGCATCCTGAATTCCATCA+CGG 0.672142 8_3:-29095670 None:intergenic
AGAGTCTCATTCCTCAACCG+GGG 0.672701 8_3:-29097268 None:intergenic
ACTAGTTCACTCCAAAATGG+AGG 0.674833 8_3:+29096378 Msa1285260:CDS
GAGTCTCATTCCTCAACCGG+GGG 0.683623 8_3:-29097267 None:intergenic
ATTCTATGGTCTGTGCTGTG+GGG 0.685456 8_3:+29096801 Msa1285260:three_prime_UTR
ACATGATGTTGAAACCATGT+TGG 0.689471 8_3:+29089823 Msa1285260:CDS
ATATCCATGACATCCTGCAG+CGG 0.689824 8_3:-29088702 None:intergenic
GTGGCTGTGATAACTGTGAG+AGG 0.701707 8_3:-29096702 None:intergenic
TTCGAATTGATTTAACCGCG+TGG 0.713873 8_3:-29096033 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTATATATAAAATAAA+AGG + chr8_3:29093881-29093900 Msa1285260:intron 0.0%
!!! TGTTATCATTATTTTAAATT+AGG + chr8_3:29090990-29091009 Msa1285260:intron 10.0%
!!! GTTATCATTATTTTAAATTA+GGG + chr8_3:29090991-29091010 Msa1285260:intron 10.0%
!!! TATAACATTTTTATTCATTT+AGG - chr8_3:29091257-29091276 None:intergenic 10.0%
!!! AAATTTTTTATATTCTACAA+GGG + chr8_3:29093606-29093625 Msa1285260:intron 10.0%
!! AAGCATATATAATAAACAAA+TGG + chr8_3:29090457-29090476 Msa1285260:intron 15.0%
!! TTATTCGTTTATATTTCATT+TGG + chr8_3:29091073-29091092 Msa1285260:intron 15.0%
!!! ATAGTCATATTTTTTTAGTT+TGG - chr8_3:29091819-29091838 None:intergenic 15.0%
!! AGGAAATTATAATTGTAATA+AGG - chr8_3:29092006-29092025 None:intergenic 15.0%
!! GTCAAATATTTCTTATAAAT+AGG - chr8_3:29092101-29092120 None:intergenic 15.0%
!!! ATTTGATCTATATTTTAGAT+CGG + chr8_3:29092148-29092167 Msa1285260:intron 15.0%
!!! TTTCTTTATTTTTGATCTAA+AGG - chr8_3:29092286-29092305 None:intergenic 15.0%
!!! ATTCAAAAAAAAAACTCTTT+TGG + chr8_3:29092338-29092357 Msa1285260:intron 15.0%
!!! TTCAAAAAAAAAACTCTTTT+GGG + chr8_3:29092339-29092358 Msa1285260:intron 15.0%
!!! TTTTCTTTTGATTACTATAA+TGG - chr8_3:29092461-29092480 None:intergenic 15.0%
!!! TTTTCTTTTGATTACTATAA+TGG - chr8_3:29092461-29092480 None:intergenic 15.0%
!!! TTACTTTAAAAAAGAAATGT+TGG - chr8_3:29092957-29092976 None:intergenic 15.0%
!!! CAAATTTTTTATATTCTACA+AGG + chr8_3:29093605-29093624 Msa1285260:intron 15.0%
!!! AAAGATCAAAATATTTTGAA+CGG + chr8_3:29094016-29094035 Msa1285260:intron 15.0%
!!! TATTTCTACATATTTTATTG+TGG - chr8_3:29094960-29094979 None:intergenic 15.0%
!! CAATAAAATATGTAGAAATA+AGG + chr8_3:29094960-29094979 Msa1285260:intron 15.0%
!!! TTAAAGAAAATGTTGTTTAT+AGG + chr8_3:29096128-29096147 Msa1285260:CDS 15.0%
!! CAATTAGTACATATTTATGA+GGG - chr8_3:29088966-29088985 None:intergenic 20.0%
!!! ATTTTTAGAGTTTGAATCAA+CGG - chr8_3:29089037-29089056 None:intergenic 20.0%
!! GTAATAAATGCTAATCAAAT+CGG + chr8_3:29089398-29089417 Msa1285260:CDS 20.0%
!! AATTATTGTTGTAGGTATTA+GGG - chr8_3:29089547-29089566 None:intergenic 20.0%
!! TAATTATTGTTGTAGGTATT+AGG - chr8_3:29089548-29089567 None:intergenic 20.0%
!! ATTCTTGTAATTATTGTTGT+AGG - chr8_3:29089555-29089574 None:intergenic 20.0%
!! ATTGCATAAATGTATATCAA+AGG - chr8_3:29089631-29089650 None:intergenic 20.0%
!!! AATTTGCATTTTTGCAATTT+TGG + chr8_3:29090028-29090047 Msa1285260:intron 20.0%
!! GATTGATAAAATACTTAGTT+TGG - chr8_3:29090176-29090195 None:intergenic 20.0%
!! TACCAAACTAACTTATAATA+CGG - chr8_3:29090288-29090307 None:intergenic 20.0%
!!! TATTATAAGTTAGTTTGGTA+AGG + chr8_3:29090288-29090307 Msa1285260:intron 20.0%
!!! ATTATAAGTTAGTTTGGTAA+GGG + chr8_3:29090289-29090308 Msa1285260:intron 20.0%
!! TATATGCTTATCATATTAGT+TGG - chr8_3:29090506-29090525 None:intergenic 20.0%
!! AATGTAATTAATAAACGTGA+TGG + chr8_3:29090761-29090780 Msa1285260:intron 20.0%
!!! AATGACTATTTGAGAATTTT+AGG - chr8_3:29092026-29092045 None:intergenic 20.0%
!! TTCTTACTTAATACTTCTTT+CGG + chr8_3:29092074-29092093 Msa1285260:intron 20.0%
!! AACTTAGAAGATGATTAAAA+TGG - chr8_3:29092671-29092690 None:intergenic 20.0%
!!! CGGAAGAATTTTTTTTTTTA+AGG + chr8_3:29092828-29092847 Msa1285260:intron 20.0%
!!! AAAAATTGCTAGTTTATAGA+AGG - chr8_3:29093021-29093040 None:intergenic 20.0%
!!! ATAAACTAGCAATTTTTTAG+AGG + chr8_3:29093024-29093043 Msa1285260:intron 20.0%
!! TAGTTTAGTAATTGTGTTAA+TGG + chr8_3:29093629-29093648 Msa1285260:intron 20.0%
!!! AGTTTCATTGAATTTAGTTT+TGG + chr8_3:29094731-29094750 Msa1285260:intron 20.0%
!! TTTAGCATAAAAAAGAGAAT+TGG - chr8_3:29094919-29094938 None:intergenic 20.0%
!! AATTTCAATCCAAAAAAACA+AGG - chr8_3:29094987-29095006 None:intergenic 20.0%
!! GTGTTTAAAAAGAATAAGTA+GGG - chr8_3:29095326-29095345 None:intergenic 20.0%
!! AGTGTTTAAAAAGAATAAGT+AGG - chr8_3:29095327-29095346 None:intergenic 20.0%
!! ATTATAACGAAGAATGAAAA+TGG - chr8_3:29095368-29095387 None:intergenic 20.0%
!!! AATTGTGTTTTGTTTTTATC+AGG - chr8_3:29096253-29096272 None:intergenic 20.0%
!!! AACAAAACACAATTTTTCTT+TGG + chr8_3:29096259-29096278 Msa1285260:CDS 20.0%
!!! ACAAAACACAATTTTTCTTT+GGG + chr8_3:29096260-29096279 Msa1285260:CDS 20.0%
!! AAGCTGAAATATTTCAAATA+GGG + chr8_3:29096533-29096552 Msa1285260:CDS 20.0%
!!! TAAAAAACATTCTGAAGAAA+AGG - chr8_3:29096910-29096929 None:intergenic 20.0%
!! TTATTATGCAGTTTAATCAA+AGG + chr8_3:29096934-29096953 Msa1285260:three_prime_UTR 20.0%
!!! ATGAATTTGTTCAATTCAAA+AGG + chr8_3:29097164-29097183 Msa1285260:three_prime_UTR 20.0%
!!! TGAATTTGTTCAATTCAAAA+GGG + chr8_3:29097165-29097184 Msa1285260:three_prime_UTR 20.0%
!!! ATTTTTTAATTGATGTCTTC+TGG + chr8_3:29097226-29097245 Msa1285260:three_prime_UTR 20.0%
!! ATCTGAAACAAATAAGGATT+GGG - chr8_3:29088621-29088640 None:intergenic 25.0%
!! TATCTGAAACAAATAAGGAT+TGG - chr8_3:29088622-29088641 None:intergenic 25.0%
!! CTGTATATCTGAAACAAATA+AGG - chr8_3:29088627-29088646 None:intergenic 25.0%
! CTTATTTGTTTCAGATATAC+AGG + chr8_3:29088625-29088644 Msa1285260:CDS 25.0%
! AAGGATGTATTCTTTATGTA+TGG + chr8_3:29088726-29088745 Msa1285260:intron 25.0%
! TTTCTAGATACGTTTAGTAT+GGG + chr8_3:29088867-29088886 Msa1285260:intron 25.0%
! GCAATTAGTACATATTTATG+AGG - chr8_3:29088967-29088986 None:intergenic 25.0%
!!! TTTTTAGAGTTTGAATCAAC+GGG - chr8_3:29089036-29089055 None:intergenic 25.0%
! GTATTAAATGCTAATCAAGT+CGG + chr8_3:29089093-29089112 Msa1285260:intron 25.0%
! TTAGATTAGCAATTAGTGTA+GGG - chr8_3:29089127-29089146 None:intergenic 25.0%
! ATTAGATTAGCAATTAGTGT+AGG - chr8_3:29089128-29089147 None:intergenic 25.0%
!! TTTTCAGAGTTTGAATCAAT+GGG - chr8_3:29089188-29089207 None:intergenic 25.0%
!! ATTTTCAGAGTTTGAATCAA+TGG - chr8_3:29089189-29089208 None:intergenic 25.0%
! GTATTAAATGCTAATCAAGT+CGG + chr8_3:29089093-29089112 Msa1285260:intron 25.0%
! TTAGATTAGCAATTAGTGTA+GGG - chr8_3:29089127-29089146 None:intergenic 25.0%
! ATTAGATTAGCAATTAGTGT+AGG - chr8_3:29089128-29089147 None:intergenic 25.0%
! ATAGTTATATGTGTACATAG+AGG - chr8_3:29089685-29089704 None:intergenic 25.0%
! AATAGATTACTAACCTTTCA+AGG - chr8_3:29089858-29089877 None:intergenic 25.0%
!!! CCAATCTCAATTTTGTTTAA+CGG - chr8_3:29090000-29090019 None:intergenic 25.0%
!!! TTGCTGGATTGTTTTTATTT+TGG + chr8_3:29090097-29090116 Msa1285260:intron 25.0%
! ATATAATGTCTTTATGTCGA+TGG + chr8_3:29090141-29090160 Msa1285260:intron 25.0%
! TACCGTATTATAAGTTAGTT+TGG + chr8_3:29090283-29090302 Msa1285260:intron 25.0%
! GTGTATTTGATGAAATCTAA+AGG - chr8_3:29090339-29090358 None:intergenic 25.0%
!!! TTTTGACTTAGTGTGATATA+AGG + chr8_3:29090366-29090385 Msa1285260:intron 25.0%
!! TTTGACTTAGTGTGATATAA+GGG + chr8_3:29090367-29090386 Msa1285260:intron 25.0%
! AACTTGATACAATACGTTTA+AGG + chr8_3:29090394-29090413 Msa1285260:intron 25.0%
!! TTTTATCCATTGATAAGTGT+CGG - chr8_3:29090555-29090574 None:intergenic 25.0%
! GTTAGAAATTATCATGCAAA+TGG - chr8_3:29090580-29090599 None:intergenic 25.0%
! ATACGTTACGAAATATTTCA+TGG - chr8_3:29090920-29090939 None:intergenic 25.0%
!!! CTTTATCATGCTACTTTTAT+TGG + chr8_3:29091024-29091043 Msa1285260:intron 25.0%
!!! ATTTTGATAAACCCTAACAT+GGG - chr8_3:29091162-29091181 None:intergenic 25.0%
!!! TATTTTGATAAACCCTAACA+TGG - chr8_3:29091163-29091182 None:intergenic 25.0%
! CACAATATTACTAACAAAAG+AGG - chr8_3:29091319-29091338 None:intergenic 25.0%
! ACATTTCTAAGTAGTTGAAA+AGG - chr8_3:29091661-29091680 None:intergenic 25.0%
!!! TATTTTTTTAGTTTGGTGAG+AGG - chr8_3:29091812-29091831 None:intergenic 25.0%
!! TCAACTGTTTCTTGTAAATA+GGG + chr8_3:29092200-29092219 Msa1285260:intron 25.0%
!! GATTTCTTCTAAAAGAAACA+TGG - chr8_3:29092244-29092263 None:intergenic 25.0%
!!! AAAAAAAAACTCTTTTGGGT+TGG + chr8_3:29092343-29092362 Msa1285260:intron 25.0%
!! CTATTTGTATTGACAATTGA+GGG - chr8_3:29092390-29092409 None:intergenic 25.0%
! TACCTATTGTTAAAACTCAA+AGG + chr8_3:29092905-29092924 Msa1285260:intron 25.0%
!!! AACCTTTGAGTTTTAACAAT+AGG - chr8_3:29092910-29092929 None:intergenic 25.0%
! AATTTGTAGCTAAAGCTTTA+AGG + chr8_3:29092986-29093005 Msa1285260:intron 25.0%
!!! GATTTTGATTTTTGTTTTGC+AGG + chr8_3:29093380-29093399 Msa1285260:intron 25.0%
! CAAGTTAAATTAATCTCCTT+TGG + chr8_3:29093514-29093533 Msa1285260:intron 25.0%
! TTTGATTCATGTATGGATTT+GGG + chr8_3:29093537-29093556 Msa1285260:intron 25.0%
!! AATTGTGTTAATGGTTTTTG+AGG + chr8_3:29093638-29093657 Msa1285260:intron 25.0%
!! ATTGTGTTAATGGTTTTTGA+GGG + chr8_3:29093639-29093658 Msa1285260:intron 25.0%
! TAAATGTTTGTCTTAGTTAG+TGG + chr8_3:29093907-29093926 Msa1285260:intron 25.0%
!!! CTTCTTTATAGTTTTAGTAG+TGG + chr8_3:29094189-29094208 Msa1285260:intron 25.0%
!!! TTTATAGTTTTAGTAGTGGA+TGG + chr8_3:29094193-29094212 Msa1285260:intron 25.0%
! TGAAATTAAAAGCTCAATGT+GGG + chr8_3:29094283-29094302 Msa1285260:intron 25.0%
! AAGAGGAATTCTAACATAAA+AGG - chr8_3:29094768-29094787 None:intergenic 25.0%
!!! AAATAAGGACCTTGTTTTTT+TGG + chr8_3:29094975-29094994 Msa1285260:intron 25.0%
! CGTTATAATTCTTCTATAGA+TGG + chr8_3:29095379-29095398 Msa1285260:intron 25.0%
! TGCTGATAAATTAATAGTCT+CGG + chr8_3:29095688-29095707 Msa1285260:CDS 25.0%
! TATAATAACCCATAAAATCG+TGG + chr8_3:29095823-29095842 Msa1285260:CDS 25.0%
! ATAATAACCCATAAAATCGT+GGG + chr8_3:29095824-29095843 Msa1285260:CDS 25.0%
! AACAGAACAAGTTAATTGAA+AGG + chr8_3:29095924-29095943 Msa1285260:CDS 25.0%
! CATTGTGATTATCGAAATAA+GGG - chr8_3:29096222-29096241 None:intergenic 25.0%
! TCATTGTGATTATCGAAATA+AGG - chr8_3:29096223-29096242 None:intergenic 25.0%
!! ATTTGAAATATTTCAGCTTG+AGG - chr8_3:29096532-29096551 None:intergenic 25.0%
! CAAGCTGAAATATTTCAAAT+AGG + chr8_3:29096532-29096551 Msa1285260:CDS 25.0%
! GAAATATTTCAAATAGGGAA+AGG + chr8_3:29096538-29096557 Msa1285260:CDS 25.0%
! AGACCATAGAATATAATTGT+GGG - chr8_3:29096793-29096812 None:intergenic 25.0%
!!! CACAAAGTTTTGTTGATATT+AGG + chr8_3:29096963-29096982 Msa1285260:three_prime_UTR 25.0%
! TTGCATATGTTAAAAGTAGT+AGG + chr8_3:29097032-29097051 Msa1285260:three_prime_UTR 25.0%
!!! TACTCCTTGCTATTTTTTTA+AGG + chr8_3:29097112-29097131 Msa1285260:three_prime_UTR 25.0%
! TTCTCCTTAAAAAAATAGCA+AGG - chr8_3:29097119-29097138 None:intergenic 25.0%
TTTGTTTCAGATATACAGGA+TGG + chr8_3:29088629-29088648 Msa1285260:CDS 30.0%
CTTTCTAGATACGTTTAGTA+TGG + chr8_3:29088866-29088885 Msa1285260:intron 30.0%
TTTATGAGGGAAAAATGCTA+GGG - chr8_3:29088953-29088972 None:intergenic 30.0%
ATTTATGAGGGAAAAATGCT+AGG - chr8_3:29088954-29088973 None:intergenic 30.0%
TGTGAAAATAGAGTTTGAAC+GGG - chr8_3:29089003-29089022 None:intergenic 30.0%
GTGTGAAAATAGAGTTTGAA+CGG - chr8_3:29089004-29089023 None:intergenic 30.0%
TAGATTAGCAATTAGTGTAG+GGG - chr8_3:29089126-29089145 None:intergenic 30.0%
TGTGAAAATAGAGTTTGAAC+GGG - chr8_3:29089003-29089022 None:intergenic 30.0%
GTGTGAAAATAGAGTTTGAA+CGG - chr8_3:29089004-29089023 None:intergenic 30.0%
TTAGATTAGCAATTAGTGCA+GGG - chr8_3:29089280-29089299 None:intergenic 30.0%
ATTAGATTAGCAATTAGTGC+AGG - chr8_3:29089281-29089300 None:intergenic 30.0%
TGTGAAAATAGAGTTTGAAC+GGG - chr8_3:29089003-29089022 None:intergenic 30.0%
GTGTGAAAATAGAGTTTGAA+CGG - chr8_3:29089004-29089023 None:intergenic 30.0%
TAGATTAGCAATTAGTGTAG+GGG - chr8_3:29089126-29089145 None:intergenic 30.0%
TGTGAAAATAGAGTTTGAAC+GGG - chr8_3:29089003-29089022 None:intergenic 30.0%
GTGTGAAAATAGAGTTTGAA+CGG - chr8_3:29089004-29089023 None:intergenic 30.0%
ATAAATGCTTGGGTGTTTAA+TGG - chr8_3:29089603-29089622 None:intergenic 30.0%
AAAGGTCATGATAAATGCTT+GGG - chr8_3:29089613-29089632 None:intergenic 30.0%
TGTATGTAAACTGCAAACAA+AGG - chr8_3:29089757-29089776 None:intergenic 30.0%
!! CAGACAATTTTGATCGTAAT+TGG - chr8_3:29089963-29089982 None:intergenic 30.0%
CCGTTAAACAAAATTGAGAT+TGG + chr8_3:29089997-29090016 Msa1285260:intron 30.0%
ATAACACAAACGAAATCATG+AGG - chr8_3:29090198-29090217 None:intergenic 30.0%
CAGCTTATAACAATGAAAAC+TGG - chr8_3:29090248-29090267 None:intergenic 30.0%
CAAAATGTTAGACTTCTAAG+TGG + chr8_3:29090837-29090856 Msa1285260:intron 30.0%
ATGGTAAACGACATTTGATA+GGG - chr8_3:29090901-29090920 None:intergenic 30.0%
TAAAAAAGAAAAGTCATGCG+TGG + chr8_3:29091136-29091155 Msa1285260:intron 30.0%
GACAAAGTCTATATGAATAG+AGG - chr8_3:29091202-29091221 None:intergenic 30.0%
! TTTTATTCATTTAGGCTGCA+TGG - chr8_3:29091249-29091268 None:intergenic 30.0%
AATTTAGTGTTTGAATCTGC+TGG - chr8_3:29091353-29091372 None:intergenic 30.0%
AATGATCTATTGCTTATGTG+TGG + chr8_3:29091497-29091516 Msa1285260:intron 30.0%
ATAGTTGTATTCTAGCAAGT+GGG - chr8_3:29091744-29091763 None:intergenic 30.0%
! TGACTATGACAAATGAGTTT+TGG + chr8_3:29091832-29091851 Msa1285260:intron 30.0%
! GTCAACTGTTTCTTGTAAAT+AGG + chr8_3:29092199-29092218 Msa1285260:intron 30.0%
!!! ATAACCCCTTTCAACTTTTT+TGG + chr8_3:29092306-29092325 Msa1285260:intron 30.0%
!!! TAACCCCTTTCAACTTTTTT+GGG + chr8_3:29092307-29092326 Msa1285260:intron 30.0%
! GCTATTTGTATTGACAATTG+AGG - chr8_3:29092391-29092410 None:intergenic 30.0%
ATAATGGTTTCGATTGTTCA+GGG - chr8_3:29092581-29092600 None:intergenic 30.0%
TATAATGGTTTCGATTGTTC+AGG - chr8_3:29092582-29092601 None:intergenic 30.0%
ATTAAAATGGACAGTCATGT+TGG - chr8_3:29092658-29092677 None:intergenic 30.0%
! AAAGATTGTTGTTGTTCACA+AGG + chr8_3:29092713-29092732 Msa1285260:intron 30.0%
TGCAACTAATCTTCCAAATA+AGG + chr8_3:29092753-29092772 Msa1285260:intron 30.0%
AATTTCGTATACGCATAAGT+CGG + chr8_3:29092808-29092827 Msa1285260:intron 30.0%
! AAGTGGATAATTTTGTCACA+TGG - chr8_3:29092867-29092886 None:intergenic 30.0%
! NNNCGGTAATCTGAAATTAG+AGG - chr8_3:29093117-29093136 None:intergenic 30.0%
TGTAAAATAGCAATCAAGCA+AGG - chr8_3:29093496-29093515 None:intergenic 30.0%
GTTTGATTCATGTATGGATT+TGG + chr8_3:29093536-29093555 Msa1285260:intron 30.0%
AAAAAAAAACTATGTCACCC+AGG - chr8_3:29093723-29093742 None:intergenic 30.0%
!!! TTTTAGTAGTGGATGGAAAT+AGG + chr8_3:29094200-29094219 Msa1285260:intron 30.0%
AAATAGGTATCTCTTGTGAT+GGG + chr8_3:29094216-29094235 Msa1285260:intron 30.0%
GTGAAATTAAAAGCTCAATG+TGG + chr8_3:29094282-29094301 Msa1285260:intron 30.0%
ATGGCAAAATCTTAACTGTA+GGG - chr8_3:29094542-29094561 None:intergenic 30.0%
TATGGCAAAATCTTAACTGT+AGG - chr8_3:29094543-29094562 None:intergenic 30.0%
ATATCTCAAATGCGTGAATA+TGG - chr8_3:29094561-29094580 None:intergenic 30.0%
AAGATTTGATATCTGCAGTT+CGG + chr8_3:29094644-29094663 Msa1285260:intron 30.0%
! GAAACTACCTTTTGTGAAAT+TGG - chr8_3:29094717-29094736 None:intergenic 30.0%
TGTTAGAATTCCTCTTTCAA+AGG + chr8_3:29094772-29094791 Msa1285260:intron 30.0%
AATTCCTCTTTCAAAGGAAA+TGG + chr8_3:29094778-29094797 Msa1285260:intron 30.0%
ATTCCTCTTTCAAAGGAAAT+GGG + chr8_3:29094779-29094798 Msa1285260:intron 30.0%
!!! CGCTTAATTAGTTTGTGTTT+TGG - chr8_3:29094853-29094872 None:intergenic 30.0%
ACCTCTTTACAAATAAGTTC+TGG + chr8_3:29094876-29094895 Msa1285260:intron 30.0%
ACCAGAACTTATTTGTAAAG+AGG - chr8_3:29094880-29094899 None:intergenic 30.0%
! TAAGTTCTGGTTACTTTGAA+TGG + chr8_3:29094889-29094908 Msa1285260:intron 30.0%
! CTACATATTTTATTGTGGAC+AGG - chr8_3:29094955-29094974 None:intergenic 30.0%
TTGTTTAGAAATGTCTTTCG+AGG + chr8_3:29095126-29095145 Msa1285260:intron 30.0%
GCAATTAAGTCATCAAAAGA+TGG - chr8_3:29095304-29095323 None:intergenic 30.0%
TGAAGAGCTTAAGAAAAAAG+TGG + chr8_3:29095556-29095575 Msa1285260:CDS 30.0%
!! ATTCAATTTTGATCCTTCAC+CGG + chr8_3:29095757-29095776 Msa1285260:CDS 30.0%
TAATAACCCATAAAATCGTG+GGG + chr8_3:29095825-29095844 Msa1285260:CDS 30.0%
GTTTCTTAAAGAGAAGTTAG+AGG + chr8_3:29095892-29095911 Msa1285260:CDS 30.0%
AGAACAAGTTAATTGAAAGG+AGG + chr8_3:29095927-29095946 Msa1285260:CDS 30.0%
!! AATTGAGTCTTTTGTTTGCA+GGG + chr8_3:29096174-29096193 Msa1285260:CDS 30.0%
! AAACACAATTTTTCTTTGGG+AGG + chr8_3:29096263-29096282 Msa1285260:CDS 30.0%
GTTAAAATCAGTGAATGCAA+AGG + chr8_3:29096294-29096313 Msa1285260:CDS 30.0%
! GTTTTACCAATCTTAAAACC+TGG - chr8_3:29096661-29096680 None:intergenic 30.0%
GACCATAGAATATAATTGTG+GGG - chr8_3:29096792-29096811 None:intergenic 30.0%
CAGACCATAGAATATAATTG+TGG - chr8_3:29096794-29096813 None:intergenic 30.0%
TATGGTTGTCCATTTGTATT+TGG + chr8_3:29096840-29096859 Msa1285260:three_prime_UTR 30.0%
TTCAAATGGCCAAATACAAA+TGG - chr8_3:29096852-29096871 None:intergenic 30.0%
TTTGGCCATTTGAAAAGAAA+AGG + chr8_3:29096858-29096877 Msa1285260:three_prime_UTR 30.0%
! CAAGACCTTTTCTTTTCAAA+TGG - chr8_3:29096866-29096885 None:intergenic 30.0%
! AAACATTCTGAAGAAAAGGA+CGG - chr8_3:29096906-29096925 None:intergenic 30.0%
TTGATATTAGGCCAATAACA+GGG + chr8_3:29096975-29096994 Msa1285260:three_prime_UTR 30.0%
CATATGTTAAAAGTAGTAGG+TGG + chr8_3:29097035-29097054 Msa1285260:three_prime_UTR 30.0%
AAAATAGCAAGGAGTAAAGA+GGG - chr8_3:29097108-29097127 None:intergenic 30.0%
AAAAATAGCAAGGAGTAAAG+AGG - chr8_3:29097109-29097128 None:intergenic 30.0%
! AGTAATTTAGAGTTTGATCG+AGG + chr8_3:29097291-29097310 Msa1285260:three_prime_UTR 30.0%
AGATTAGCAATTAGTGTAGG+GGG - chr8_3:29089125-29089144 None:intergenic 35.0%
TAGATTAGCAATTAGTGCAG+GGG - chr8_3:29089279-29089298 None:intergenic 35.0%
AGATTAGCAATTAGTGTAGG+GGG - chr8_3:29089125-29089144 None:intergenic 35.0%
! TGGGTGTTTAATGGTTAGTT+GGG - chr8_3:29089594-29089613 None:intergenic 35.0%
TTGGGTGTTTAATGGTTAGT+TGG - chr8_3:29089595-29089614 None:intergenic 35.0%
CAAAGGTCATGATAAATGCT+TGG - chr8_3:29089614-29089633 None:intergenic 35.0%
GTACATAGAGGATGATGATT+GGG - chr8_3:29089673-29089692 None:intergenic 35.0%
TGTACATAGAGGATGATGAT+TGG - chr8_3:29089674-29089693 None:intergenic 35.0%
ACGCACGTGTATATATAGAA+TGG - chr8_3:29089725-29089744 None:intergenic 35.0%
TGTAAACTGCAAACAAAGGA+GGG - chr8_3:29089753-29089772 None:intergenic 35.0%
ATGTAAACTGCAAACAAAGG+AGG - chr8_3:29089754-29089773 None:intergenic 35.0%
ACGTATCATCAAACCTCTAA+TGG + chr8_3:29089796-29089815 Msa1285260:CDS 35.0%
ACATCATGTTCAACCATTAG+AGG - chr8_3:29089812-29089831 None:intergenic 35.0%
ACATGATGTTGAAACCATGT+TGG + chr8_3:29089823-29089842 Msa1285260:CDS 35.0%
!! TCATGTTTTTACAGCTCCAT+TGG + chr8_3:29089935-29089954 Msa1285260:intron 35.0%
TTGATCGTAATTGGATCCAA+TGG - chr8_3:29089954-29089973 None:intergenic 35.0%
GATCAAAATTGTCTGTGTGA+AGG + chr8_3:29089968-29089987 Msa1285260:CDS 35.0%
!! TTTTGCAATTTTGGTCCTGT+TGG + chr8_3:29090037-29090056 Msa1285260:intron 35.0%
! TAAGTTAGTTTGGTAAGGGA+TGG + chr8_3:29090293-29090312 Msa1285260:intron 35.0%
! GGGATGGTGTTAAAAAGAAA+AGG + chr8_3:29090309-29090328 Msa1285260:intron 35.0%
ACTTAGTGTGATATAAGGGT+TGG + chr8_3:29090371-29090390 Msa1285260:intron 35.0%
AAAGTTACAGATGCATAGTG+TGG + chr8_3:29090430-29090449 Msa1285260:intron 35.0%
GACCAAATTCTTATTGCCTA+AGG + chr8_3:29090699-29090718 Msa1285260:intron 35.0%
CACCTTAGGCAATAAGAATT+TGG - chr8_3:29090704-29090723 None:intergenic 35.0%
TTGACAACGTCGCAATTAAT+AGG + chr8_3:29090786-29090805 Msa1285260:intron 35.0%
TCTAAGTGGTTCATCTGATA+TGG + chr8_3:29090851-29090870 Msa1285260:intron 35.0%
CATGGTAAACGACATTTGAT+AGG - chr8_3:29090902-29090921 None:intergenic 35.0%
AGTCTATATGAATAGAGGCA+CGG - chr8_3:29091197-29091216 None:intergenic 35.0%
! TTACATTAGTGTTCTAGCTG+TGG - chr8_3:29091551-29091570 None:intergenic 35.0%
TAGTTGTATTCTAGCAAGTG+GGG - chr8_3:29091743-29091762 None:intergenic 35.0%
GATAGTTGTATTCTAGCAAG+TGG - chr8_3:29091745-29091764 None:intergenic 35.0%
!! TTTAGTTTGGTGAGAGGAAA+TGG - chr8_3:29091806-29091825 None:intergenic 35.0%
CATGGAAAATATTACTCCTC+CGG - chr8_3:29092226-29092245 None:intergenic 35.0%
!! TCTAAAGGTGTTGTGTAACA+TGG - chr8_3:29092271-29092290 None:intergenic 35.0%
CAACCCAAAAAAGTTGAAAG+GGG - chr8_3:29092313-29092332 None:intergenic 35.0%
CCAACCCAAAAAAGTTGAAA+GGG - chr8_3:29092314-29092333 None:intergenic 35.0%
ACCAACCCAAAAAAGTTGAA+AGG - chr8_3:29092315-29092334 None:intergenic 35.0%
CGTTGTCACAATAAAAAGAG+CGG + chr8_3:29092527-29092546 Msa1285260:intron 35.0%
TGTGTGTGTTTAGTATGAAG+TGG - chr8_3:29092884-29092903 None:intergenic 35.0%
CATGACATCTATCGATCATA+TGG + chr8_3:29092931-29092950 Msa1285260:intron 35.0%
TTCGTCTATTCCTGATTTCT+TGG + chr8_3:29093438-29093457 Msa1285260:CDS 35.0%
ATACATACCTCCAAGAAATC+AGG - chr8_3:29093451-29093470 None:intergenic 35.0%
AAATAGCAATCAAGCAAGGA+AGG - chr8_3:29093492-29093511 None:intergenic 35.0%
CCATACATGAATCAAACCAA+AGG - chr8_3:29093533-29093552 None:intergenic 35.0%
!! CCTTTGGTTTGATTCATGTA+TGG + chr8_3:29093530-29093549 Msa1285260:intron 35.0%
!! TCATGTATGGATTTGGGTTT+TGG + chr8_3:29093543-29093562 Msa1285260:intron 35.0%
TCTTGTGTTGTGCTTTCTTA+AGG + chr8_3:29093673-29093692 Msa1285260:intron 35.0%
! TGCATTTTAGATGAGAGAGA+AGG + chr8_3:29093758-29093777 Msa1285260:intron 35.0%
ACACTAAGATGAGAATCTAC+CGG - chr8_3:29093848-29093867 None:intergenic 35.0%
AACAGTGGGAAAACAGTAAA+TGG + chr8_3:29093954-29093973 Msa1285260:intron 35.0%
ATACCAGTGTGTGATCATAA+AGG - chr8_3:29094112-29094131 None:intergenic 35.0%
GAAATAGGTATCTCTTGTGA+TGG + chr8_3:29094215-29094234 Msa1285260:intron 35.0%
ACAAGGACTCATATCAAAGT+GGG - chr8_3:29094329-29094348 None:intergenic 35.0%
AACAAGGACTCATATCAAAG+TGG - chr8_3:29094330-29094349 None:intergenic 35.0%
GTGATTCCCTGTAAATAATC+TGG - chr8_3:29094381-29094400 None:intergenic 35.0%
CACAGAAATGTGCATACATA+TGG + chr8_3:29094398-29094417 Msa1285260:CDS 35.0%
TGGCAAAATCTTAACTGTAG+GGG - chr8_3:29094541-29094560 None:intergenic 35.0%
! TCACGCATTTGAGATATCAA+TGG + chr8_3:29094564-29094583 Msa1285260:intron 35.0%
GCTTAAGCCAATTTCACAAA+AGG + chr8_3:29094707-29094726 Msa1285260:intron 35.0%
! TTCTGGTTACTTTGAATGGT+GGG + chr8_3:29094893-29094912 Msa1285260:intron 35.0%
! GCATGTTTAGAAAGCTCTAA+AGG - chr8_3:29095106-29095125 None:intergenic 35.0%
GAAACTCCAACCTCTATTAA+AGG + chr8_3:29095199-29095218 Msa1285260:intron 35.0%
TACATCAAGGCCTTTAATAG+AGG - chr8_3:29095212-29095231 None:intergenic 35.0%
ATGCTTTAACGCTTACATCA+AGG - chr8_3:29095225-29095244 None:intergenic 35.0%
CTTCGTGTAAAATCAATGAC+TGG + chr8_3:29095467-29095486 Msa1285260:CDS 35.0%
ACATTGCTTTAACTCAGCTA+AGG - chr8_3:29095723-29095742 None:intergenic 35.0%
TAGCTGAGTTAAAGCAATGT+TGG + chr8_3:29095723-29095742 Msa1285260:CDS 35.0%
AATTGTTGCAGCCGAATTAA+AGG + chr8_3:29095787-29095806 Msa1285260:CDS 35.0%
ACTCTTCAGCTCCTTTAATT+CGG - chr8_3:29095801-29095820 None:intergenic 35.0%
TCTTAAAGAGAAGTTAGAGG+AGG + chr8_3:29095895-29095914 Msa1285260:CDS 35.0%
GAAAGGAGGTTAAATCAAAG+TGG + chr8_3:29095941-29095960 Msa1285260:CDS 35.0%
! CTTGATAATCTACACATCTC+AGG + chr8_3:29095977-29095996 Msa1285260:CDS 35.0%
!! CAATTGAGTCTTTTGTTTGC+AGG + chr8_3:29096173-29096192 Msa1285260:CDS 35.0%
TGTGATTATCGAAATAAGGG+AGG - chr8_3:29096219-29096238 None:intergenic 35.0%
! AAGATGGCAAAAGGTGATTT+TGG - chr8_3:29096337-29096356 None:intergenic 35.0%
! ACCTTTTGCCATCTTTTGTT+GGG + chr8_3:29096342-29096361 Msa1285260:CDS 35.0%
GTATTTCACCCAACAAAAGA+TGG - chr8_3:29096353-29096372 None:intergenic 35.0%
! AAAGAATGATGCCTCCATTT+TGG - chr8_3:29096392-29096411 None:intergenic 35.0%
!! AAAATGGAGGCATCATTCTT+TGG + chr8_3:29096391-29096410 Msa1285260:CDS 35.0%
! TCTTTGGTGACATGAAACAA+AGG + chr8_3:29096407-29096426 Msa1285260:CDS 35.0%
GACATGAAACAAAGGAATGT+TGG + chr8_3:29096415-29096434 Msa1285260:CDS 35.0%
AGTGAACAAGTTGTTGTCAT+CGG - chr8_3:29096449-29096468 None:intergenic 35.0%
! GTTCACTTCATTTGCTGAAA+TGG + chr8_3:29096462-29096481 Msa1285260:CDS 35.0%
! ATTTGCTGAAATGGCTAAGA+GGG + chr8_3:29096471-29096490 Msa1285260:CDS 35.0%
CAGATTCTCTGATGTATACA+TGG + chr8_3:29096564-29096583 Msa1285260:CDS 35.0%
!!! GTAGTTCCAGGTTTTAAGAT+TGG + chr8_3:29096652-29096671 Msa1285260:CDS 35.0%
! TTTCTTTTCACTTGAGCTTG+TGG - chr8_3:29096724-29096743 None:intergenic 35.0%
! ATGTCACTTCCATGAAACAA+AGG + chr8_3:29096745-29096764 Msa1285260:exon 35.0%
GACCCCACAATTATATTCTA+TGG + chr8_3:29096787-29096806 Msa1285260:three_prime_UTR 35.0%
GTTGATATTAGGCCAATAAC+AGG + chr8_3:29096974-29096993 Msa1285260:three_prime_UTR 35.0%
AGCTAAACAATCCCTGTTAT+TGG - chr8_3:29096989-29097008 None:intergenic 35.0%
! TGGTATTGCAAGCTTTTAGC+CGG + chr8_3:29088649-29088668 Msa1285260:CDS 40.0%
! CACTTGCTGAAATATCCATC+CGG - chr8_3:29088671-29088690 None:intergenic 40.0%
! CATGCGCATTAACTTGATAC+TGG - chr8_3:29088841-29088860 None:intergenic 40.0%
GGGAAAAATGCTAGGGATAA+GGG - chr8_3:29088946-29088965 None:intergenic 40.0%
AGGGAAAAATGCTAGGGATA+AGG - chr8_3:29088947-29088966 None:intergenic 40.0%
AGATTAGCAATTAGTGCAGG+GGG - chr8_3:29089278-29089297 None:intergenic 40.0%
TCGCTTCTATATGATACCCA+CGG - chr8_3:29089515-29089534 None:intergenic 40.0%
!! TTGGTGTTGCATTCCTTGAA+AGG + chr8_3:29089842-29089861 Msa1285260:CDS 40.0%
GCTTATTCTGCGTGTTCATT+TGG + chr8_3:29089888-29089907 Msa1285260:intron 40.0%
AACAGATGCAAAATGCCAAC+AGG - chr8_3:29090055-29090074 None:intergenic 40.0%
GCAACTTCATTCAATGTTGC+TGG + chr8_3:29090081-29090100 Msa1285260:intron 40.0%
GTTCTTCCGACACTTATCAA+TGG + chr8_3:29090546-29090565 Msa1285260:intron 40.0%
GTAAACGTAAGAGTCACCTT+AGG - chr8_3:29090718-29090737 None:intergenic 40.0%
! GTCTATATGAATAGAGGCAC+GGG - chr8_3:29091196-29091215 None:intergenic 40.0%
TGTGTGGAGTTGTATCGAAA+TGG + chr8_3:29091513-29091532 Msa1285260:intron 40.0%
CATAACGCAATCCACATAAG+AGG - chr8_3:29091705-29091724 None:intergenic 40.0%
AGACCTTTGAACCCTATTCT+CGG - chr8_3:29091774-29091793 None:intergenic 40.0%
ACTTTGTTGAACACCGTTGA+CGG + chr8_3:29091866-29091885 Msa1285260:intron 40.0%
AGTAGACTTATTCCCGTCAA+CGG - chr8_3:29091882-29091901 None:intergenic 40.0%
TTGACGGGAATAAGTCTACT+AGG + chr8_3:29091882-29091901 Msa1285260:intron 40.0%
GGAATAAGTCTACTAGGACA+CGG + chr8_3:29091888-29091907 Msa1285260:intron 40.0%
! CTGTTTCTTGTAAATAGGGC+CGG + chr8_3:29092204-29092223 Msa1285260:intron 40.0%
!!! CCCTTTCAACTTTTTTGGGT+TGG + chr8_3:29092311-29092330 Msa1285260:intron 40.0%
TTCGATTGTTCAGGGAAAGA+CGG - chr8_3:29092573-29092592 None:intergenic 40.0%
CTTCACTCAAGTTTGATGCT+TGG - chr8_3:29092788-29092807 None:intergenic 40.0%
ATTCAGCAGGTAAGTGAATG+TGG + chr8_3:29093067-29093086 Msa1285260:intron 40.0%
GAGAAGAGACGATAGAACAA+AGG - chr8_3:29093275-29093294 None:intergenic 40.0%
GTCTATTCCTGATTTCTTGG+AGG + chr8_3:29093441-29093460 Msa1285260:CDS 40.0%
! GAAAGCACAACACAAGACAA+TGG - chr8_3:29093670-29093689 None:intergenic 40.0%
CTTTCTTAAGGTAGCATGTC+CGG + chr8_3:29093685-29093704 Msa1285260:intron 40.0%
GGATTGATTAAGAGAGATCG+AGG + chr8_3:29093779-29093798 Msa1285260:intron 40.0%
AGTGGATGTTGAAATGACTG+TGG + chr8_3:29093925-29093944 Msa1285260:intron 40.0%
GATGTTGAAATGACTGTGGT+GGG + chr8_3:29093929-29093948 Msa1285260:intron 40.0%
TTGTAGAGAGTCGTTAGTCA+TGG + chr8_3:29093992-29094011 Msa1285260:intron 40.0%
ACTCATATGTGTCTGCAACA+AGG - chr8_3:29094346-29094365 None:intergenic 40.0%
AAATAATCTGGCCTAGCAGT+AGG - chr8_3:29094369-29094388 None:intergenic 40.0%
TGCTAGGCCAGATTATTTAC+AGG + chr8_3:29094371-29094390 Msa1285260:CDS 40.0%
GCTAGGCCAGATTATTTACA+GGG + chr8_3:29094372-29094391 Msa1285260:CDS 40.0%
! CTACCCATTTCCTTTGAAAG+AGG - chr8_3:29094785-29094804 None:intergenic 40.0%
! GTTCTGGTTACTTTGAATGG+TGG + chr8_3:29094892-29094911 Msa1285260:intron 40.0%
TTTATTGTGGACAGGCTTTC+AGG - chr8_3:29094947-29094966 None:intergenic 40.0%
CAGTGAAAAGCAAAGCTTCA+AGG - chr8_3:29095024-29095043 None:intergenic 40.0%
TCAAGGCCTTTAATAGAGGT+TGG - chr8_3:29095208-29095227 None:intergenic 40.0%
GCTCTTCATCTTCTTCTTCA+TGG - chr8_3:29095544-29095563 None:intergenic 40.0%
AATTCCATCACGGTCATAAG+GGG - chr8_3:29095663-29095682 None:intergenic 40.0%
GAATTCCATCACGGTCATAA+GGG - chr8_3:29095664-29095683 None:intergenic 40.0%
TGAATTCCATCACGGTCATA+AGG - chr8_3:29095665-29095684 None:intergenic 40.0%
! TTATGACCGTGATGGAATTC+AGG + chr8_3:29095664-29095683 Msa1285260:CDS 40.0%
!! AATTTTGATCCTTCACCGGA+GGG + chr8_3:29095761-29095780 Msa1285260:CDS 40.0%
! CTTCTTCCCCACGATTTTAT+GGG - chr8_3:29095834-29095853 None:intergenic 40.0%
! ACTTCTTCCCCACGATTTTA+TGG - chr8_3:29095835-29095854 None:intergenic 40.0%
AGAATCGAAGTCGCTTCTTA+AGG + chr8_3:29095856-29095875 Msa1285260:CDS 40.0%
AGAGCAGATACAAAGTGTGT+AGG - chr8_3:29096010-29096029 None:intergenic 40.0%
! TTCGAATTGATTTAACCGCG+TGG - chr8_3:29096036-29096055 None:intergenic 40.0%
! TCGAAGCTTTGTGAAGTTGT+TGG + chr8_3:29096051-29096070 Msa1285260:CDS 40.0%
GTTTATGAGATGAGATCTGC+TGG + chr8_3:29096073-29096092 Msa1285260:CDS 40.0%
! CACCTTTTGCCATCTTTTGT+TGG + chr8_3:29096341-29096360 Msa1285260:CDS 40.0%
ACCCAACAAAAGATGGCAAA+AGG - chr8_3:29096346-29096365 None:intergenic 40.0%
! GAGACTAGTTCACTCCAAAA+TGG + chr8_3:29096375-29096394 Msa1285260:CDS 40.0%
ACTAGTTCACTCCAAAATGG+AGG + chr8_3:29096378-29096397 Msa1285260:CDS 40.0%
GTGAACAAGTTGTTGTCATC+GGG - chr8_3:29096448-29096467 None:intergenic 40.0%
! CATTTGCTGAAATGGCTAAG+AGG + chr8_3:29096470-29096489 Msa1285260:CDS 40.0%
ATATTCTATGGTCTGTGCTG+TGG + chr8_3:29096799-29096818 Msa1285260:three_prime_UTR 40.0%
TATTCTATGGTCTGTGCTGT+GGG + chr8_3:29096800-29096819 Msa1285260:three_prime_UTR 40.0%
AGGTCTTGAGCATTTGCAAT+AGG + chr8_3:29096878-29096897 Msa1285260:three_prime_UTR 40.0%
CAGGGATTGTTTAGCTGTTA+TGG + chr8_3:29096993-29097012 Msa1285260:three_prime_UTR 40.0%
! ACCTATTTTGTGTTAACCCC+CGG + chr8_3:29097251-29097270 Msa1285260:three_prime_UTR 40.0%
! ATTGCAAGCTTTTAGCCGGA+TGG + chr8_3:29088653-29088672 Msa1285260:CDS 45.0%
ATATCCATGACATCCTGCAG+CGG - chr8_3:29088705-29088724 None:intergenic 45.0%
GCAGGATGTCATGGATATCA+AGG + chr8_3:29088707-29088726 Msa1285260:CDS 45.0%
TATGGGCGTTACACTAGACT+TGG + chr8_3:29088884-29088903 Msa1285260:intron 45.0%
AGGGTGAATTAGGGCAAACA+TGG - chr8_3:29088917-29088936 None:intergenic 45.0%
GGGCAAAGTAGGGTGAATTA+GGG - chr8_3:29088926-29088945 None:intergenic 45.0%
AGGGCAAAGTAGGGTGAATT+AGG - chr8_3:29088927-29088946 None:intergenic 45.0%
CTAGGGATAAGGGCAAAGTA+GGG - chr8_3:29088936-29088955 None:intergenic 45.0%
GGCTGAGAGTTTGAATCAAC+AGG - chr8_3:29089494-29089513 None:intergenic 45.0%
TTGATTCAAACTCTCAGCCG+TGG + chr8_3:29089495-29089514 Msa1285260:CDS 45.0%
TGATTCAAACTCTCAGCCGT+GGG + chr8_3:29089496-29089515 Msa1285260:CDS 45.0%
CAAGGAATGCAACACCAACA+TGG - chr8_3:29089840-29089859 None:intergenic 45.0%
! AGCATTTGCTACTCGCATAG+TGG - chr8_3:29090613-29090632 None:intergenic 45.0%
ACGCAATCCACATAAGAGGA+GGG - chr8_3:29091701-29091720 None:intergenic 45.0%
AACGCAATCCACATAAGAGG+AGG - chr8_3:29091702-29091721 None:intergenic 45.0%
ACTATCGAACTCCCGAGAAT+AGG + chr8_3:29091759-29091778 Msa1285260:intron 45.0%
CTATCGAACTCCCGAGAATA+GGG + chr8_3:29091760-29091779 Msa1285260:intron 45.0%
GACCTTTGAACCCTATTCTC+GGG - chr8_3:29091773-29091792 None:intergenic 45.0%
CTTTGTTGAACACCGTTGAC+GGG + chr8_3:29091867-29091886 Msa1285260:intron 45.0%
! GACACGGTTACTTCTTTTCG+AGG + chr8_3:29091904-29091923 Msa1285260:intron 45.0%
!! ACGGTTACTTCTTTTCGAGG+AGG + chr8_3:29091907-29091926 Msa1285260:intron 45.0%
!! CGGTTACTTCTTTTCGAGGA+GGG + chr8_3:29091908-29091927 Msa1285260:intron 45.0%
TTTCTTGTAAATAGGGCCGG+AGG + chr8_3:29092207-29092226 Msa1285260:intron 45.0%
TCGATTGTTCAGGGAAAGAC+GGG - chr8_3:29092572-29092591 None:intergenic 45.0%
!! CAAGTTTGATGCTTGGTGCT+TGG - chr8_3:29092781-29092800 None:intergenic 45.0%
TCTGATCATCAGCATTCAGC+AGG + chr8_3:29093054-29093073 Msa1285260:intron 45.0%
AGCAATCAAGCAAGGAAGGA+AGG - chr8_3:29093488-29093507 None:intergenic 45.0%
CACAACACAAGACAATGGAC+GGG - chr8_3:29093665-29093684 None:intergenic 45.0%
GCACAACACAAGACAATGGA+CGG - chr8_3:29093666-29093685 None:intergenic 45.0%
! ACCTGGGTGACATAGCTTTT+GGG - chr8_3:29093814-29093833 None:intergenic 45.0%
AGATGAGAATCTACCGGACA+CGG - chr8_3:29093842-29093861 None:intergenic 45.0%
GGATGTTGAAATGACTGTGG+TGG + chr8_3:29093928-29093947 Msa1285260:intron 45.0%
TGGGATCATTACACTCACAC+AGG - chr8_3:29094310-29094329 None:intergenic 45.0%
CACATATGAGTCCTACTGCT+AGG + chr8_3:29094355-29094374 Msa1285260:CDS 45.0%
CACGAAAAACTGCTGCATTC+AGG - chr8_3:29094684-29094703 None:intergenic 45.0%
! CGAGCTAGTTTACTCTTGTG+TGG - chr8_3:29095431-29095450 None:intergenic 45.0%
! ACTGGAGTTGCACAAGTTGA+TGG + chr8_3:29095485-29095504 Msa1285260:CDS 45.0%
CAGCATCCTGAATTCCATCA+CGG - chr8_3:29095673-29095692 None:intergenic 45.0%
!! CAATTTTGATCCTTCACCGG+AGG + chr8_3:29095760-29095779 Msa1285260:CDS 45.0%
ATGAGATGAGATCTGCTGGT+TGG + chr8_3:29096077-29096096 Msa1285260:CDS 45.0%
! TGAGATGAGATCTGCTGGTT+GGG + chr8_3:29096078-29096097 Msa1285260:CDS 45.0%
CTGAAATGGCTAAGAGGGTA+TGG + chr8_3:29096476-29096495 Msa1285260:CDS 45.0%
! GTTGCTTTCACTGTAGTTCC+AGG + chr8_3:29096640-29096659 Msa1285260:CDS 45.0%
! CTGCTGCTACCTTTGTTTCA+TGG - chr8_3:29096757-29096776 None:intergenic 45.0%
ATTCTATGGTCTGTGCTGTG+GGG + chr8_3:29096801-29096820 Msa1285260:three_prime_UTR 45.0%
! GGACTGAGTCAGCTTTGATA+TGG + chr8_3:29096822-29096841 Msa1285260:three_prime_UTR 45.0%
ACCGGGGGTTAACACAAAAT+AGG - chr8_3:29097255-29097274 None:intergenic 45.0%
TAGAGTCTCATTCCTCAACC+GGG - chr8_3:29097272-29097291 None:intergenic 45.0%
CTAGAGTCTCATTCCTCAAC+CGG - chr8_3:29097273-29097292 None:intergenic 45.0%
!! ATAATATAAATAAATATAGA+TGG - chr8_3:29094445-29094464 None:intergenic 5.0%
TATCCATGACATCCTGCAGC+GGG - chr8_3:29088704-29088723 None:intergenic 50.0%
! GGCGTTACACTAGACTTGGT+TGG + chr8_3:29088888-29088907 Msa1285260:intron 50.0%
GCTAGGGATAAGGGCAAAGT+AGG - chr8_3:29088937-29088956 None:intergenic 50.0%
! TTTTGACCCGTGCTATCGCA+CGG - chr8_3:29091105-29091124 None:intergenic 50.0%
TTCATTTAGGCTGCATGGCG+TGG - chr8_3:29091244-29091263 None:intergenic 50.0%
TCGTTGTCCCTCCTCTTATG+TGG + chr8_3:29091691-29091710 Msa1285260:intron 50.0%
CTCCCGAGAATAGGGTTCAA+AGG + chr8_3:29091768-29091787 Msa1285260:intron 50.0%
CGATTGTTCAGGGAAAGACG+GGG - chr8_3:29092571-29092590 None:intergenic 50.0%
! TTGGTGCTTGGCGCCTTATT+TGG - chr8_3:29092769-29092788 None:intergenic 50.0%
TAAGGTAGCATGTCCGGTGT+CGG + chr8_3:29093691-29093710 Msa1285260:intron 50.0%
! CCTGGGTGACATAGCTTTTG+GGG - chr8_3:29093813-29093832 None:intergenic 50.0%
! CACCTGGGTGACATAGCTTT+TGG - chr8_3:29093815-29093834 None:intergenic 50.0%
! TGACTGTGGTGGGAAAACAG+TGG + chr8_3:29093939-29093958 Msa1285260:intron 50.0%
! GACTGTGGTGGGAAAACAGT+GGG + chr8_3:29093940-29093959 Msa1285260:intron 50.0%
! TCTTGTGATGGGATGCCTCA+GGG + chr8_3:29094227-29094246 Msa1285260:intron 50.0%
GAGAGAAACTAACACCCCTG+AGG - chr8_3:29094245-29094264 None:intergenic 50.0%
!! GTAGGGGAGCGTCTTTAGTT+GGG - chr8_3:29094525-29094544 None:intergenic 50.0%
!! TGTAGGGGAGCGTCTTTAGT+TGG - chr8_3:29094526-29094545 None:intergenic 50.0%
GAATCCCCTTATGACCGTGA+TGG + chr8_3:29095656-29095675 Msa1285260:CDS 50.0%
GTGGCTGTGATAACTGTGAG+AGG - chr8_3:29096705-29096724 None:intergenic 50.0%
TTTGTGTTAACCCCCGGTTG+AGG + chr8_3:29097257-29097276 Msa1285260:three_prime_UTR 50.0%
AGAGTCTCATTCCTCAACCG+GGG - chr8_3:29097271-29097290 None:intergenic 50.0%
GTAAGACCCGTGCGATAGCA+CGG + chr8_3:29091095-29091114 Msa1285260:intron 55.0%
TAAGACCCGTGCGATAGCAC+GGG + chr8_3:29091096-29091115 Msa1285260:intron 55.0%
TTTGACCCGTGCTATCGCAC+GGG - chr8_3:29091104-29091123 None:intergenic 55.0%
AGTCATGCGTGGCCCATGTT+AGG + chr8_3:29091147-29091166 Msa1285260:intron 55.0%
GTCATGCGTGGCCCATGTTA+GGG + chr8_3:29091148-29091167 Msa1285260:intron 55.0%
! TCCGGTGTCGGAAAACACCT+GGG + chr8_3:29093703-29093722 Msa1285260:intron 55.0%
! ACCCAGGTGTTTTCCGACAC+CGG - chr8_3:29093707-29093726 None:intergenic 55.0%
CCCCAAAAGCTATGTCACCC+AGG + chr8_3:29093810-29093829 Msa1285260:intron 55.0%
! CTCTTGTGATGGGATGCCTC+AGG + chr8_3:29094226-29094245 Msa1285260:intron 55.0%
! CTTGTGATGGGATGCCTCAG+GGG + chr8_3:29094228-29094247 Msa1285260:intron 55.0%
ACAATTGCTCCCTCCGGTGA+AGG - chr8_3:29095773-29095792 None:intergenic 55.0%
GCTGCAACAATTGCTCCCTC+CGG - chr8_3:29095779-29095798 None:intergenic 55.0%
TGTATCTGCTCTTCGCCACG+CGG + chr8_3:29096018-29096037 Msa1285260:CDS 55.0%
GAGTCTCATTCCTCAACCGG+GGG - chr8_3:29097270-29097289 None:intergenic 55.0%
GTACCCGCTGCAGGATGTCA+TGG + chr8_3:29088698-29088717 Msa1285260:CDS 60.0%
! GTCCGGTGTCGGAAAACACC+TGG + chr8_3:29093702-29093721 Msa1285260:intron 60.0%
! ACCCAGGTGCTATCCGTGTC+CGG + chr8_3:29093826-29093845 Msa1285260:intron 60.0%
ACCGGACACGGATAGCACCT+GGG - chr8_3:29093830-29093849 None:intergenic 60.0%
TACCGGACACGGATAGCACC+TGG - chr8_3:29093831-29093850 None:intergenic 60.0%
TGCTCGTTCGTACCCGCTGC+AGG + chr8_3:29088689-29088708 Msa1285260:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 29088609 29097315 29088609 ID=Msa1285260;Name=Msa1285260
chr8_3 mRNA 29088609 29097315 29088609 ID=Msa1285260-mRNA-1;Parent=Msa1285260;Name=Msa1285260-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0.28|0.28|1|1|7|556|650
chr8_3 exon 29088609 29088731 29088609 ID=Msa1285260-mRNA-1:exon:9742;Parent=Msa1285260-mRNA-1
chr8_3 exon 29089332 29089517 29089332 ID=Msa1285260-mRNA-1:exon:9743;Parent=Msa1285260-mRNA-1
chr8_3 exon 29089767 29089863 29089767 ID=Msa1285260-mRNA-1:exon:9744;Parent=Msa1285260-mRNA-1
chr8_3 exon 29089949 29089994 29089949 ID=Msa1285260-mRNA-1:exon:9745;Parent=Msa1285260-mRNA-1
chr8_3 exon 29093402 29093462 29093402 ID=Msa1285260-mRNA-1:exon:9746;Parent=Msa1285260-mRNA-1
chr8_3 exon 29094354 29094431 29094354 ID=Msa1285260-mRNA-1:exon:9747;Parent=Msa1285260-mRNA-1
chr8_3 exon 29095398 29097315 29095398 ID=Msa1285260-mRNA-1:exon:9748;Parent=Msa1285260-mRNA-1
chr8_3 CDS 29088609 29088731 29088609 ID=Msa1285260-mRNA-1:cds;Parent=Msa1285260-mRNA-1
chr8_3 CDS 29089332 29089517 29089332 ID=Msa1285260-mRNA-1:cds;Parent=Msa1285260-mRNA-1
chr8_3 CDS 29089767 29089863 29089767 ID=Msa1285260-mRNA-1:cds;Parent=Msa1285260-mRNA-1
chr8_3 CDS 29089949 29089994 29089949 ID=Msa1285260-mRNA-1:cds;Parent=Msa1285260-mRNA-1
chr8_3 CDS 29093402 29093462 29093402 ID=Msa1285260-mRNA-1:cds;Parent=Msa1285260-mRNA-1
chr8_3 CDS 29094354 29094431 29094354 ID=Msa1285260-mRNA-1:cds;Parent=Msa1285260-mRNA-1
chr8_3 CDS 29095398 29096759 29095398 ID=Msa1285260-mRNA-1:cds;Parent=Msa1285260-mRNA-1
chr8_3 three_prime_UTR 29096760 29097315 29096760 ID=Msa1285260-mRNA-1:three_prime_utr;Parent=Msa1285260-mRNA-1
Gene Sequence

>Msa1285260

ATGTCTCATCCCAATCCTTATTTGTTTCAGATATACAGGATGGTATTGCAAGCTTTTAGCCGGATGGATATTTCAGCAAGTGCTCGTTCGTACCCGCTGCAGGATGTCATGGATATCAAGGATATCACACTCGTTGATTCAAACTCTGAAAATGTTCTCTCATATAACTTAGTTAATGCAATTGAAGACGTAATAAATGCTAATCAAATCGGTCAACAACCCCCTACACTAATTGCTAATCTAATCTCACCCGTTCAAACTCTATTTTCACACTTGATCACACCTGTTGATTCAAACTCTCAGCCGTGGTTTACATACATCTATAACGAATTTTATCAACGTATCATCAAACCTCTAATGGTTGAACATGATGTTGAAACCATGTTGGTGTTGCATTCCTTGAAAGCTCCATTGGATCCAATTACGATCAAAATTGTCTGTGTGAAGGTTGAGTTATTTTTCTATGAAAACAACATAATAACAACGTCTTCGTCTATTCCTGATTTCTTGGAGACACATATGAGTCCTACTGCTAGGCCAGATTATTTACAGGGAATCACAGAAATGTGCATACATATGGTGAATGAGTGTATGGATTCTGTGAAGCATTCAGCAGTGACACCACACAAGAGTAAACTAGCTCGCACTTTATCAAAGATTCTTCGTGTAAAATCAATGACTGGAGTTGCACAAGTTGATGGACTGAAGAATGTTAAAGTTGATGTTAATCTCAACCATGAAGAAGAAGATGAAGAGCTTAAGAAAAAAGTGGTCACAGAAGCTTTGCTTTCGAAAGTTTTTGCTAGCATTTCAACTATAAAAGCTTCATATGCTCAGCTACAACATGCTGAATCCCCTTATGACCGTGATGGAATTCAGGATGCTGATAAATTAATAGTCTCGGAATTGAAGACCTTAGCTGAGTTAAAGCAATGTTGGTTCAAAAAACAATTCAATTTTGATCCTTCACCGGAGGGAGCAATTGTTGCAGCCGAATTAAAGGAGCTGAAGAGTAATATAATAACCCATAAAATCGTGGGGAAGAAGTTAGAATCGAAGTCGCTTCTTAAGGATTCTGAGATAATGTTTCTTAAAGAGAAGTTAGAGGAGGCAAATAAACAGAACAAGTTAATTGAAAGGAGGTTAAATCAAAGTGGTTCATTATCATCTCTTGATAATCTACACATCTCAGGACTAAGTCCTACACACTTTGTATCTGCTCTTCGCCACGCGGTTAAATCAATTCGAAGCTTTGTGAAGTTGTTGGTTTATGAGATGAGATCTGCTGGTTGGGATATTGATGCATCTGTGAATGCTATTGTTAAAGAAAATGTTGTTTATAGGAAAGAAGATCACAAGTGTTTTGCAATTGAGTCTTTTGTTTGCAGGGAAATGTTTGACTCTTTCAACCTCCCTTATTTCGATAATCACAATGATTTTCTTCCTGATAAAAACAAAACACAATTTTTCTTTGGGAGGTTCAATGAGTTAAAATCAGTGAATGCAAAGGAGTTTCTTGCTTTGAAACCAAAATCACCTTTTGCCATCTTTTGTTGGGTGAAATACTTGAGACTAGTTCACTCCAAAATGGAGGCATCATTCTTTGGTGACATGAAACAAAGGAATGTTGGAGAATTTCCCGATGACAACAACTTGTTCACTTCATTTGCTGAAATGGCTAAGAGGGTATGGCTTCTGCATTGCTTAGCATTTTCTTTTGAACCTCAAGCTGAAATATTTCAAATAGGGAAAGGTTGCAGATTCTCTGATGTATACATGGAGAGTGTTGTAAATGATGATGAAGTAGCACTAGCAGATGAACTTGAGCAACAAGTTGCTTTCACTGTAGTTCCAGGTTTTAAGATTGGTAAAACTGTTTTACAGTGTCAAGTTTACCTCTCACAGTTATCACAGCCACAAGCTCAAGTGAAAAGAAAAATGTCACTTCCATGA
Protein sequence

>Msa1285260

MSHPNPYLFQIYRMVLQAFSRMDISASARSYPLQDVMDIKDITLVDSNSENVLSYNLVNAIEDVINANQIGQQPPTLIANLISPVQTLFSHLITPVDSNSQPWFTYIYNEFYQRIIKPLMVEHDVETMLVLHSLKAPLDPITIKIVCVKVELFFYENNIITTSSSIPDFLETHMSPTARPDYLQGITEMCIHMVNECMDSVKHSAVTPHKSKLARTLSKILRVKSMTGVAQVDGLKNVKVDVNLNHEEEDEELKKKVVTEALLSKVFASISTIKASYAQLQHAESPYDRDGIQDADKLIVSELKTLAELKQCWFKKQFNFDPSPEGAIVAAELKELKSNIITHKIVGKKLESKSLLKDSEIMFLKEKLEEANKQNKLIERRLNQSGSLSSLDNLHISGLSPTHFVSALRHAVKSIRSFVKLLVYEMRSAGWDIDASVNAIVKENVVYRKEDHKCFAIESFVCREMFDSFNLPYFDNHNDFLPDKNKTQFFFGRFNELKSVNAKEFLALKPKSPFAIFCWVKYLRLVHSKMEASFFGDMKQRNVGEFPDDNNLFTSFAEMAKRVWLLHCLAFSFEPQAEIFQIGKGCRFSDVYMESVVNDDEVALADELEQQVAFTVVPGFKIGKTVLQCQVYLSQLSQPQAQVKRKMSLP*