Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281800 | sp|P51074|ANX4_FRAAN | 62.581 | 310 | 85 | 2 | 1 | 279 | 1 | 310 | 2.50e-134 | 388 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281800 | G7LF87 | 89.644 | 309 | 2 | 1 | 1 | 279 | 1 | 309 | 0.0 | 548 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037180 | Msa1281800 | 0.807100 | 5.961798e-50 | -8.615850e-47 |
| Msa0045810 | Msa1281800 | 0.804593 | 2.005360e-49 | -8.615850e-47 |
| Msa0092220 | Msa1281800 | 0.814772 | 1.299317e-51 | -8.615850e-47 |
| Msa0120450 | Msa1281800 | 0.801278 | 9.710439e-49 | -8.615850e-47 |
| Msa0618680 | Msa1281800 | 0.809898 | 1.506904e-50 | -8.615850e-47 |
| Msa0643230 | Msa1281800 | 0.801026 | 1.093124e-48 | -8.615850e-47 |
| Msa0682110 | Msa1281800 | 0.802017 | 6.847502e-49 | -8.615850e-47 |
| Msa0682160 | Msa1281800 | 0.806844 | 6.753970e-50 | -8.615850e-47 |
| Msa0686830 | Msa1281800 | 0.805235 | 1.471892e-49 | -8.615850e-47 |
| Msa0707330 | Msa1281800 | 0.811573 | 6.544728e-51 | -8.615850e-47 |
| Msa0197170 | Msa1281800 | 0.803331 | 3.668194e-49 | -8.615850e-47 |
| Msa1240490 | Msa1281800 | 0.823415 | 1.402073e-53 | -8.615850e-47 |
| Msa1250660 | Msa1281800 | 0.814681 | 1.361421e-51 | -8.615850e-47 |
| Msa1281800 | Msa1283980 | 0.802716 | 4.917159e-49 | -8.615850e-47 |
| Msa1281800 | Msa1284020 | 0.831591 | 1.530640e-55 | -8.615850e-47 |
| Msa1281800 | Msa1321010 | 0.813742 | 2.193821e-51 | -8.615850e-47 |
| Msa1281800 | Msa1322960 | 0.805443 | 1.331623e-49 | -8.615850e-47 |
| Msa1281800 | Msa1322980 | 0.817105 | 3.918073e-52 | -8.615850e-47 |
| Msa1281800 | Msa1323070 | 0.837880 | 4.002177e-57 | -8.615850e-47 |
| Msa1281800 | Msa1331570 | -0.803996 | 2.670386e-49 | -8.615850e-47 |
| Msa1281800 | Msa1363310 | -0.806367 | 8.513695e-50 | -8.615850e-47 |
| Msa1281800 | Msa1386580 | -0.805410 | 1.352789e-49 | -8.615850e-47 |
| Msa1281800 | Msa1388720 | -0.803359 | 3.619620e-49 | -8.615850e-47 |
| Msa1281800 | Msa1403660 | 0.801565 | 8.480192e-49 | -8.615850e-47 |
| Msa1281800 | Msa1432730 | -0.800791 | 1.221319e-48 | -8.615850e-47 |
| Msa1281800 | Msa1433360 | 0.812439 | 4.238250e-51 | -8.615850e-47 |
| Msa1281800 | Msa1439250 | 0.809803 | 1.579727e-50 | -8.615850e-47 |
| Msa1281800 | Msa1445530 | 0.805395 | 1.362581e-49 | -8.615850e-47 |
| Msa1281800 | Msa1455360 | 0.803568 | 3.275808e-49 | -8.615850e-47 |
| Msa1041060 | Msa1281800 | 0.802661 | 5.047609e-49 | -8.615850e-47 |
| Msa1094810 | Msa1281800 | 0.817669 | 2.925537e-52 | -8.615850e-47 |
| Msa0285420 | Msa1281800 | 0.843490 | 1.357491e-58 | -8.615850e-47 |
| Msa0298000 | Msa1281800 | 0.813283 | 2.768433e-51 | -8.615850e-47 |
| Msa0303900 | Msa1281800 | 0.821764 | 3.393898e-53 | -8.615850e-47 |
| Msa0324220 | Msa1281800 | 0.826021 | 3.409208e-54 | -8.615850e-47 |
| Msa0333770 | Msa1281800 | 0.804110 | 2.528174e-49 | -8.615850e-47 |
| Msa0354550 | Msa1281800 | 0.803343 | 3.647856e-49 | -8.615850e-47 |
| Msa1129120 | Msa1281800 | -0.805999 | 1.017670e-49 | -8.615850e-47 |
| Msa1165460 | Msa1281800 | 0.818041 | 2.410149e-52 | -8.615850e-47 |
| Msa0496070 | Msa1281800 | 0.803508 | 3.371084e-49 | -8.615850e-47 |
| Msa0526520 | Msa1281800 | -0.804474 | 2.123138e-49 | -8.615850e-47 |
| Msa0567330 | Msa1281800 | 0.802382 | 5.762457e-49 | -8.615850e-47 |
| Msa0873880 | Msa1281800 | 0.817088 | 3.953257e-52 | -8.615850e-47 |
| Msa0909260 | Msa1281800 | 0.809259 | 2.066795e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281800 | MtrunA17_Chr8g0352621 | 89.644 | 309 | 2 | 1 | 1 | 279 | 1 | 309 | 0.0 | 548 |
| Msa1281800 | MtrunA17_Chr3g0083901 | 70.323 | 310 | 61 | 2 | 1 | 279 | 1 | 310 | 2.93e-158 | 446 |
| Msa1281800 | MtrunA17_Chr8g0352591 | 72.241 | 299 | 63 | 2 | 1 | 279 | 1 | 299 | 7.19e-154 | 434 |
| Msa1281800 | MtrunA17_Chr8g0352611 | 67.419 | 310 | 69 | 3 | 1 | 279 | 1 | 309 | 8.67e-143 | 407 |
| Msa1281800 | MtrunA17_Chr3g0083921 | 62.581 | 310 | 85 | 2 | 1 | 279 | 1 | 310 | 2.36e-137 | 393 |
| Msa1281800 | MtrunA17_Chr2g0293441 | 42.903 | 310 | 146 | 2 | 1 | 279 | 1 | 310 | 1.14e-85 | 261 |
| Msa1281800 | MtrunA17_Chr8g0382281 | 45.338 | 311 | 138 | 2 | 1 | 279 | 1 | 311 | 1.47e-78 | 243 |
| Msa1281800 | MtrunA17_Chr5g0425971 | 42.765 | 311 | 146 | 2 | 1 | 279 | 1 | 311 | 7.33e-78 | 241 |
| Msa1281800 | MtrunA17_Chr8g0352571 | 37.217 | 309 | 161 | 2 | 4 | 279 | 6 | 314 | 3.13e-62 | 201 |
| Msa1281800 | MtrunA17_Chr8g0393281 | 36.538 | 312 | 164 | 4 | 1 | 279 | 1 | 311 | 8.28e-59 | 192 |
| Msa1281800 | MtrunA17_Chr6g0479411 | 35.647 | 317 | 168 | 5 | 1 | 283 | 28 | 342 | 7.69e-53 | 178 |
| Msa1281800 | MtrunA17_Chr6g0479421 | 36.909 | 317 | 164 | 5 | 1 | 283 | 1 | 315 | 1.26e-52 | 176 |
| Msa1281800 | MtrunA17_Chr1g0162071 | 33.333 | 312 | 174 | 4 | 1 | 279 | 1 | 311 | 1.20e-49 | 169 |
| Msa1281800 | MtrunA17_Chr1g0210981 | 34.185 | 313 | 170 | 5 | 1 | 279 | 1 | 311 | 9.52e-48 | 164 |
| Msa1281800 | MtrunA17_Chr6g0479391 | 33.110 | 299 | 166 | 4 | 13 | 279 | 15 | 311 | 6.70e-44 | 154 |
| Msa1281800 | MtrunA17_Chr8g0352581 | 33.866 | 313 | 152 | 8 | 13 | 278 | 5 | 309 | 2.08e-38 | 139 |
| Msa1281800 | MtrunA17_Chr3g0084011 | 65.753 | 73 | 24 | 1 | 1 | 72 | 1 | 73 | 4.38e-27 | 103 |
| Msa1281800 | MtrunA17_Chr3g0084021 | 72.059 | 68 | 19 | 0 | 110 | 177 | 2 | 69 | 6.88e-27 | 101 |
| Msa1281800 | MtrunA17_Chr6g0461141 | 28.322 | 286 | 161 | 7 | 31 | 278 | 28 | 307 | 1.46e-25 | 105 |
| Msa1281800 | MtrunA17_Chr2g0328241 | 60.920 | 87 | 28 | 3 | 279 | 359 | 33 | 119 | 1.40e-23 | 102 |
| Msa1281800 | MtrunA17_Chr4g0024031 | 60.465 | 86 | 28 | 3 | 279 | 358 | 33 | 118 | 1.09e-22 | 99.4 |
| Msa1281800 | MtrunA17_Chr1g0176351 | 51.515 | 99 | 26 | 4 | 241 | 334 | 10 | 91 | 1.96e-20 | 88.6 |
| Msa1281800 | MtrunA17_Chr8g0389491 | 72.549 | 51 | 13 | 1 | 279 | 328 | 93 | 143 | 2.15e-18 | 82.8 |
| Msa1281800 | MtrunA17_Chr2g0328251 | 47.414 | 116 | 43 | 7 | 251 | 359 | 15 | 119 | 1.81e-14 | 74.7 |
| Msa1281800 | MtrunA17_Chr8g0356091 | 63.158 | 57 | 16 | 2 | 308 | 359 | 1 | 57 | 1.32e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281800 | AT5G12380.1 | 49.032 | 310 | 127 | 2 | 1 | 279 | 1 | 310 | 3.47e-103 | 306 |
| Msa1281800 | AT1G35720.1 | 45.833 | 312 | 136 | 3 | 1 | 279 | 1 | 312 | 2.64e-85 | 261 |
| Msa1281800 | AT5G10230.1 | 47.157 | 299 | 128 | 1 | 11 | 279 | 13 | 311 | 2.94e-85 | 261 |
| Msa1281800 | AT5G10220.1 | 48.173 | 301 | 124 | 3 | 11 | 279 | 13 | 313 | 2.41e-83 | 256 |
| Msa1281800 | AT5G65020.1 | 44.667 | 300 | 135 | 2 | 11 | 279 | 13 | 312 | 4.39e-79 | 245 |
| Msa1281800 | AT5G65020.2 | 43.902 | 287 | 130 | 2 | 24 | 279 | 11 | 297 | 1.08e-72 | 228 |
| Msa1281800 | AT2G38760.1 | 37.582 | 306 | 155 | 3 | 10 | 279 | 12 | 317 | 2.39e-64 | 207 |
| Msa1281800 | AT1G68090.1 | 32.558 | 301 | 172 | 2 | 10 | 279 | 12 | 312 | 6.92e-45 | 157 |
| Msa1281800 | AT1G68090.2 | 30.126 | 239 | 136 | 2 | 10 | 217 | 12 | 250 | 2.99e-29 | 114 |
| Msa1281800 | AT2G38750.2 | 29.870 | 308 | 161 | 8 | 24 | 283 | 2 | 302 | 8.90e-28 | 110 |
| Msa1281800 | AT2G38750.1 | 29.938 | 324 | 168 | 10 | 11 | 283 | 4 | 319 | 9.15e-28 | 111 |
Find 73 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATAAGGTATTACCTTTAA+AGG | 0.238854 | 8_3:+21527569 | None:intergenic |
| TGCTGATCGCGATGCTGTTT+TGG | 0.280081 | 8_3:-21526435 | Msa1281800:CDS |
| GCTCTCCAAAAGGCCTTTAA+AGG | 0.281505 | 8_3:-21527582 | Msa1281800:intron |
| AAGCGAGTTACCTGCCATTC+TGG | 0.301986 | 8_3:+21523832 | None:intergenic |
| TATTACCTTTAAAGGCCTTT+TGG | 0.308660 | 8_3:+21527577 | None:intergenic |
| GAAGAGTGTTATCACAATAT+TGG | 0.312360 | 8_3:-21526714 | Msa1281800:CDS |
| TGCTGAGATCAATCCGAAAT+TGG | 0.313967 | 8_3:-21526049 | Msa1281800:CDS |
| CTCATTGCCAAAACTTCTTC+CGG | 0.321456 | 8_3:+21526344 | None:intergenic |
| AAGAGTGTTATCACAATATT+GGG | 0.381882 | 8_3:-21526713 | Msa1281800:CDS |
| CTCAAAGTCACCGGAGAGTT+CGG | 0.388274 | 8_3:+21526607 | None:intergenic |
| ACAAATCAGAAAATCATATC+AGG | 0.393138 | 8_3:-21526666 | Msa1281800:CDS |
| TCCTTGATTACAGAAACTAT+TGG | 0.399533 | 8_3:-21525795 | Msa1281800:intron |
| GCAGTGGCAAAGGAAATTTC+AGG | 0.403300 | 8_3:-21525440 | Msa1281800:CDS |
| CGAACTCTCCGGTGACTTTG+AGG | 0.424075 | 8_3:-21526606 | Msa1281800:intron |
| CACCGGAGAGTTCGGATTCA+AGG | 0.439311 | 8_3:+21526615 | None:intergenic |
| GAGTCTTGCTCCTTGTAGTA+AGG | 0.451508 | 8_3:+21525953 | None:intergenic |
| CCTTGTAGTAAGGATTCTAA+TGG | 0.455797 | 8_3:+21525963 | None:intergenic |
| CCACCTGGTATCGGTATTGT+TGG | 0.459295 | 8_3:-21523699 | Msa1281800:CDS |
| GTTCGGATTCAAGGCGTTTG+AGG | 0.480884 | 8_3:+21526624 | None:intergenic |
| CGCGGTGCGCTGAAAAGGGT+TGG | 0.481256 | 8_3:-21525569 | Msa1281800:CDS |
| TAATCTTTGTTGTAACAAAA+CGG | 0.481557 | 8_3:+21523884 | None:intergenic |
| TTCTGGAAGCATGTCTCAAA+AGG | 0.492886 | 8_3:+21523849 | None:intergenic |
| AATTGTTTCTGTTCTTTCAC+CGG | 0.496681 | 8_3:-21526363 | Msa1281800:CDS |
| AAGGGCTGAGAAAGACTTGA+AGG | 0.508028 | 8_3:-21525510 | Msa1281800:CDS |
| CTTGCTTCCCCAACAAGGTA+AGG | 0.508755 | 8_3:+21525399 | None:intergenic |
| AAAACAGCATCGCGATCAGC+AGG | 0.508816 | 8_3:+21526437 | None:intergenic |
| AGCTGTGTACCGTTGGATGC+TGG | 0.510810 | 8_3:-21526462 | Msa1281800:CDS |
| AGACATGCTTCCAGAATGGC+AGG | 0.512773 | 8_3:-21523842 | Msa1281800:CDS |
| GGCGTTTGAGGATATCCTCT+TGG | 0.516904 | 8_3:+21526636 | None:intergenic |
| TTTGGCTAATGTAGCCATCA+AGG | 0.526066 | 8_3:-21526417 | Msa1281800:CDS |
| CCTTGAGGATGCAGTGGCAA+AGG | 0.527077 | 8_3:-21525450 | Msa1281800:CDS |
| TTTGAGACATGCTTCCAGAA+TGG | 0.529513 | 8_3:-21523846 | Msa1281800:CDS |
| CTGGTGAGCTCATTTAGATA+TGG | 0.529789 | 8_3:-21526075 | Msa1281800:CDS |
| CCATAAGAAGTACTATGAAA+AGG | 0.532592 | 8_3:-21525714 | Msa1281800:intron |
| CGCCTTGAATCCGAACTCTC+CGG | 0.532655 | 8_3:-21526617 | Msa1281800:CDS |
| AGTGATAAGCCACCTGGTAT+CGG | 0.537837 | 8_3:-21523708 | Msa1281800:CDS |
| AGACGCTGAGGCTCTCCAAA+AGG | 0.539038 | 8_3:-21527592 | Msa1281800:CDS |
| AGGGTTGGAACGGATGAAGA+TGG | 0.541748 | 8_3:-21525554 | Msa1281800:CDS |
| TGACTCGTGTGGTGGTGACA+AGG | 0.541793 | 8_3:-21525529 | Msa1281800:CDS |
| CCTTTGCCACTGCATCCTCA+AGG | 0.543737 | 8_3:+21525450 | None:intergenic |
| ATCAGAGAGCTGTGTACCGT+TGG | 0.546500 | 8_3:-21526469 | Msa1281800:intron |
| CCATTAGAATCCTTACTACA+AGG | 0.546524 | 8_3:-21525963 | Msa1281800:CDS |
| TCACTAGCAATACTAACATC+AGG | 0.548277 | 8_3:+21523726 | None:intergenic |
| CCTGGTATCGGTATTGTTGG+CGG | 0.549429 | 8_3:-21523696 | Msa1281800:CDS |
| TGCGCTGAAAAGGGTTGGAA+CGG | 0.566936 | 8_3:-21525564 | Msa1281800:CDS |
| AGAGCCTCAGCGTCTTCCAC+AGG | 0.570840 | 8_3:+21527600 | None:intergenic |
| ATGTCTCAAAAGGTCGGTCA+AGG | 0.571507 | 8_3:+21523859 | None:intergenic |
| TACAATAAAATCATCTCCTG+TGG | 0.573463 | 8_3:-21527616 | Msa1281800:CDS |
| GCTAATGTAGCCATCAAGGA+TGG | 0.577877 | 8_3:-21526413 | Msa1281800:CDS |
| GACTCGTGTGGTGGTGACAA+GGG | 0.592907 | 8_3:-21525528 | Msa1281800:CDS |
| CCTTTGTTATGGAAATGCCA+TGG | 0.602491 | 8_3:+21525896 | None:intergenic |
| GAGAAACAGTGTTCACCTTG+AGG | 0.606208 | 8_3:-21525465 | Msa1281800:CDS |
| TTATTGTACCTCAAAGTCAC+CGG | 0.610260 | 8_3:+21526598 | None:intergenic |
| CCGCCAACAATACCGATACC+AGG | 0.611358 | 8_3:+21523696 | None:intergenic |
| GGCAGGTAACTCGCTTAAGA+CGG | 0.614503 | 8_3:-21523825 | Msa1281800:CDS |
| GGAAGCATGTCTCAAAAGGT+CGG | 0.627776 | 8_3:+21523853 | None:intergenic |
| TGTTCACCTTGAGGATGCAG+TGG | 0.633928 | 8_3:-21525456 | Msa1281800:CDS |
| CAGCAGGTTCCAGCATCCAA+CGG | 0.637752 | 8_3:+21526453 | None:intergenic |
| ATCTCCTGTGGAAGACGCTG+AGG | 0.640239 | 8_3:-21527604 | Msa1281800:CDS |
| GTCATTGATGCATCGAATCG+TGG | 0.644618 | 8_3:+21525736 | None:intergenic |
| ATTGCTAGTGATAAGCCACC+TGG | 0.646931 | 8_3:-21523714 | Msa1281800:CDS |
| CCATGGCATTTCCATAACAA+AGG | 0.649108 | 8_3:-21525896 | Msa1281800:intron |
| GTGAGCTCATTTAGATATGG+CGG | 0.649359 | 8_3:-21526072 | Msa1281800:CDS |
| TGCCATGGTCATCTCTATAG+CGG | 0.655258 | 8_3:+21525911 | None:intergenic |
| ATATCAGGAAATTTACCAAG+AGG | 0.671803 | 8_3:-21526651 | Msa1281800:CDS |
| TGCATCTGATGACTTTCACA+AGG | 0.672519 | 8_3:-21525768 | Msa1281800:CDS |
| CTAGCAATACTAACATCAGG+TGG | 0.676842 | 8_3:+21523729 | None:intergenic |
| AAACAATTTCAATAATAACA+TGG | 0.685647 | 8_3:+21526378 | None:intergenic |
| CATGATGTTTAGATTCTGCG+CGG | 0.707946 | 8_3:-21525587 | Msa1281800:intron |
| TGAAGATGGACTGACTCGTG+TGG | 0.728074 | 8_3:-21525540 | Msa1281800:CDS |
| AACCGCTATAGAGATGACCA+TGG | 0.734411 | 8_3:-21525913 | Msa1281800:CDS |
| AGATGGACTGACTCGTGTGG+TGG | 0.744616 | 8_3:-21525537 | Msa1281800:CDS |
| CCAACAATACCGATACCAGG+TGG | 0.768379 | 8_3:+21523699 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATAAAAAACAAAATC+AGG | + | chr8_3:21523915-21523934 | None:intergenic | 10.0% |
| !!! | TTAATTTGAAATGAAAAAAA+CGG | + | chr8_3:21524062-21524081 | None:intergenic | 10.0% |
| !!! | AAAATCTTCTAAAATTAATA+AGG | + | chr8_3:21524179-21524198 | None:intergenic | 10.0% |
| !! | TAATAAGTTACATAAAAATA+AGG | + | chr8_3:21524792-21524811 | None:intergenic | 10.0% |
| !!! | ATTTGATTATTTTAATTTCA+AGG | + | chr8_3:21525115-21525134 | None:intergenic | 10.0% |
| !! | GAAATTAAAATAATCAAATT+AGG | - | chr8_3:21525116-21525135 | Msa1281800:intron | 10.0% |
| !! | ATTAAGAGAATTATTATTTA+TGG | - | chr8_3:21526199-21526218 | Msa1281800:intron | 10.0% |
| !!! | TATTGATTTAAGTTATTATA+TGG | + | chr8_3:21526293-21526312 | None:intergenic | 10.0% |
| !! | ATTATGAAAAAAAATTGATA+GGG | + | chr8_3:21526429-21526448 | None:intergenic | 10.0% |
| !! | TATTATGAAAAAAAATTGAT+AGG | + | chr8_3:21526430-21526449 | None:intergenic | 10.0% |
| !!! | ATTTTGATAATGTATATAAA+AGG | - | chr8_3:21527546-21527565 | Msa1281800:intron | 10.0% |
| !!! | TCATCTTCAATTAATTATTT+TGG | - | chr8_3:21523787-21523806 | Msa1281800:intron | 15.0% |
| !!! | CAATTAATTATTTTGGTTAA+TGG | - | chr8_3:21523794-21523813 | Msa1281800:CDS | 15.0% |
| !! | TAGGATAATAAAATCAATTA+TGG | - | chr8_3:21524336-21524355 | Msa1281800:intron | 15.0% |
| !! | AATCATTCAAAAATAAATCA+GGG | + | chr8_3:21524565-21524584 | None:intergenic | 15.0% |
| !! | AAATCATTCAAAAATAAATC+AGG | + | chr8_3:21524566-21524585 | None:intergenic | 15.0% |
| !! | AAACAATTTCAATAATAACA+TGG | + | chr8_3:21524953-21524972 | None:intergenic | 15.0% |
| !!! | TATGTTAGATAATCAAATTT+TGG | - | chr8_3:21525207-21525226 | Msa1281800:intron | 15.0% |
| !! | AGGAATATATATTGTAATAA+TGG | - | chr8_3:21525974-21525993 | Msa1281800:CDS | 15.0% |
| !! | GGAATATATATTGTAATAAT+GGG | - | chr8_3:21525975-21525994 | Msa1281800:CDS | 15.0% |
| !!! | GTGAAAATTAGATAATATTT+TGG | - | chr8_3:21526152-21526171 | Msa1281800:intron | 15.0% |
| !! | TAATAATTCTCTTAATATGT+TGG | + | chr8_3:21526195-21526214 | None:intergenic | 15.0% |
| !! | ACAATATCATTGATAAAAAT+TGG | + | chr8_3:21526457-21526476 | None:intergenic | 15.0% |
| !! | AACAGAAAATTACTAAAATT+AGG | + | chr8_3:21526812-21526831 | None:intergenic | 15.0% |
| !! | AAAACATTTACTATATCAGT+AGG | + | chr8_3:21523967-21523986 | None:intergenic | 20.0% |
| !!! | GTGTATAACTTTTTTAACAA+TGG | + | chr8_3:21524224-21524243 | None:intergenic | 20.0% |
| !!! | TCAATATTTTTATGTATCTG+CGG | + | chr8_3:21524502-21524521 | None:intergenic | 20.0% |
| !! | ACATAAAAATATTGATGTTC+CGG | - | chr8_3:21524507-21524526 | Msa1281800:intron | 20.0% |
| !! | CAAAAATAAATGGTAAAAGA+GGG | + | chr8_3:21525473-21525492 | None:intergenic | 20.0% |
| !! | ACAAAAATAAATGGTAAAAG+AGG | + | chr8_3:21525474-21525493 | None:intergenic | 20.0% |
| !! | AAAGCGAAAACAAAAATAAA+TGG | + | chr8_3:21525483-21525502 | None:intergenic | 20.0% |
| !! | ATGGTAAAAAAAAAAGATCA+CGG | + | chr8_3:21525724-21525743 | None:intergenic | 20.0% |
| !!! | TATATTGTAATAATGGGATA+TGG | - | chr8_3:21525981-21526000 | Msa1281800:CDS | 20.0% |
| !! | TAAATTACTAGTTGAATGAA+TGG | - | chr8_3:21526109-21526128 | Msa1281800:intron | 20.0% |
| !! | AAGTACTATAGAAAATACTA+TGG | + | chr8_3:21526780-21526799 | None:intergenic | 20.0% |
| !!! | TTTATTATTTCTGACCTATT+AGG | - | chr8_3:21526842-21526861 | Msa1281800:intron | 20.0% |
| !!! | TTATTATTTCTGACCTATTA+GGG | - | chr8_3:21526843-21526862 | Msa1281800:intron | 20.0% |
| !!! | TAATCTTTGTTGTAACAAAA+CGG | + | chr8_3:21527447-21527466 | None:intergenic | 20.0% |
| !! | GTATAAGGTATTACCTTTAA+AGG | + | chr8_3:21523762-21523781 | None:intergenic | 25.0% |
| ! | TTGAAGATGATTAGTGTATA+AGG | + | chr8_3:21523777-21523796 | None:intergenic | 25.0% |
| !! | ATTTTCGTAATTCTTTACCA+GGG | - | chr8_3:21523859-21523878 | Msa1281800:CDS | 25.0% |
| !! | TATATGGTTAGTGTCTATTT+TGG | + | chr8_3:21524023-21524042 | None:intergenic | 25.0% |
| !! | ACTAACCATATAGAAGATTT+TGG | - | chr8_3:21524031-21524050 | Msa1281800:intron | 25.0% |
| ! | CAATACCAAAATCTTCTATA+TGG | + | chr8_3:21524039-21524058 | None:intergenic | 25.0% |
| !! | TGAATGATTTTGAATTGTGT+AGG | - | chr8_3:21524576-21524595 | Msa1281800:intron | 25.0% |
| !!! | AAGAGTGTTATCACAATATT+GGG | - | chr8_3:21524615-21524634 | Msa1281800:intron | 25.0% |
| ! | ACAAATCAGAAAATCATATC+AGG | - | chr8_3:21524662-21524681 | Msa1281800:intron | 25.0% |
| ! | ATAAGGTATATGAAATTGTG+TGG | + | chr8_3:21524775-21524794 | None:intergenic | 25.0% |
| !!! | TGAGTCGATATTTTGAATAA+CGG | - | chr8_3:21524825-21524844 | Msa1281800:intron | 25.0% |
| ! | GAATCAATCAAAGAGAAAAA+AGG | - | chr8_3:21525328-21525347 | Msa1281800:intron | 25.0% |
| !!! | ACTTTTTTTCACCTTTGTTA+TGG | + | chr8_3:21525446-21525465 | None:intergenic | 25.0% |
| ! | GGTGGAATTACAAAATTTAA+TGG | - | chr8_3:21526130-21526149 | Msa1281800:intron | 25.0% |
| ! | ATTCTCTTAATATGTTGGAT+TGG | + | chr8_3:21526190-21526209 | None:intergenic | 25.0% |
| ! | ATATCTTGAGAATTGATCAA+TGG | - | chr8_3:21526259-21526278 | Msa1281800:intron | 25.0% |
| !! | GTTAACTACATGTGAATTTT+TGG | + | chr8_3:21526556-21526575 | None:intergenic | 25.0% |
| ! | TAAATCTAAATGATGTAGGA+GGG | - | chr8_3:21526751-21526770 | Msa1281800:intron | 25.0% |
| !! | ACAACTGTTTAGCTTAAATA+GGG | + | chr8_3:21526880-21526899 | None:intergenic | 25.0% |
| !! | TACAACTGTTTAGCTTAAAT+AGG | + | chr8_3:21526881-21526900 | None:intergenic | 25.0% |
| !! | TAGAGAGTTTTCTCAATTTT+TGG | - | chr8_3:21526937-21526956 | Msa1281800:intron | 25.0% |
| ! | AACTGAAAGATAATTACTAC+AGG | - | chr8_3:21527391-21527410 | Msa1281800:intron | 25.0% |
| TACAATAAAATCATCTCCTG+TGG | - | chr8_3:21523712-21523731 | Msa1281800:CDS | 30.0% | |
| !! | TATTACCTTTAAAGGCCTTT+TGG | + | chr8_3:21523754-21523773 | None:intergenic | 30.0% |
| ! | CATTTTCGTAATTCTTTACC+AGG | - | chr8_3:21523858-21523877 | Msa1281800:CDS | 30.0% |
| ! | TTTTCGTAATTCTTTACCAG+GGG | - | chr8_3:21523860-21523879 | Msa1281800:CDS | 30.0% |
| TACTACTCTCTAAGCAAATT+TGG | - | chr8_3:21524086-21524105 | Msa1281800:intron | 30.0% | |
| ACTGTATATATTGAAGAGCT+AGG | - | chr8_3:21524283-21524302 | Msa1281800:intron | 30.0% | |
| CTGTATATATTGAAGAGCTA+GGG | - | chr8_3:21524284-21524303 | Msa1281800:intron | 30.0% | |
| CAACTTATAGCATCAAAGTT+AGG | - | chr8_3:21524317-21524336 | Msa1281800:intron | 30.0% | |
| TTGATATTGCTAAGAACACA+TGG | - | chr8_3:21524465-21524484 | Msa1281800:intron | 30.0% | |
| ! | TGATTTTGAATTGTGTAGGA+TGG | - | chr8_3:21524580-21524599 | Msa1281800:intron | 30.0% |
| ! | GATTTTGAATTGTGTAGGAT+GGG | - | chr8_3:21524581-21524600 | Msa1281800:intron | 30.0% |
| ! | ATTTTGAATTGTGTAGGATG+GGG | - | chr8_3:21524582-21524601 | Msa1281800:intron | 30.0% |
| !! | GAAGAGTGTTATCACAATAT+TGG | - | chr8_3:21524614-21524633 | Msa1281800:intron | 30.0% |
| ATATCAGGAAATTTACCAAG+AGG | - | chr8_3:21524677-21524696 | Msa1281800:intron | 30.0% | |
| !! | GAGTCGATATTTTGAATAAC+GGG | - | chr8_3:21524826-21524845 | Msa1281800:intron | 30.0% |
| !! | AGTCGATATTTTGAATAACG+GGG | - | chr8_3:21524827-21524846 | Msa1281800:intron | 30.0% |
| !! | AATTGTTTCTGTTCTTTCAC+CGG | - | chr8_3:21524965-21524984 | Msa1281800:intron | 30.0% |
| ! | CTTAGCATTTTCATGTTAGT+CGG | - | chr8_3:21525144-21525163 | Msa1281800:intron | 30.0% |
| ! | GATAAGAATTTTTGTGAACG+TGG | + | chr8_3:21525510-21525529 | None:intergenic | 30.0% |
| TCCTTGATTACAGAAACTAT+TGG | - | chr8_3:21525533-21525552 | Msa1281800:CDS | 30.0% | |
| TCCAATAGTTTCTGTAATCA+AGG | + | chr8_3:21525537-21525556 | None:intergenic | 30.0% | |
| ! | CCTTTTCATAGTACTTCTTA+TGG | + | chr8_3:21525617-21525636 | None:intergenic | 30.0% |
| !! | CCATAAGAAGTACTATGAAA+AGG | - | chr8_3:21525614-21525633 | Msa1281800:intron | 30.0% |
| ! | TAGTTTCTTCGATTTGTTCA+AGG | - | chr8_3:21525642-21525661 | Msa1281800:intron | 30.0% |
| TTACAAGTTTATGTGTGAGA+CGG | + | chr8_3:21525680-21525699 | None:intergenic | 30.0% | |
| TGAAGTCATTGTTCTTTCTA+AGG | - | chr8_3:21525954-21525973 | Msa1281800:CDS | 30.0% | |
| ! | ATAATGGGATATGGATATGT+TGG | - | chr8_3:21525990-21526009 | Msa1281800:CDS | 30.0% |
| !! | ATATGTTGGTTTCTTTCTTG+TGG | - | chr8_3:21526004-21526023 | Msa1281800:CDS | 30.0% |
| ! | TATCATGTTTTCATGAGTCA+TGG | - | chr8_3:21526053-21526072 | Msa1281800:CDS | 30.0% |
| ATTACTAGTTGAATGAATGG+TGG | - | chr8_3:21526112-21526131 | Msa1281800:intron | 30.0% | |
| AATAGTTGAATGTGCATTCA+AGG | - | chr8_3:21526309-21526328 | Msa1281800:intron | 30.0% | |
| ATAGTTGAATGTGCATTCAA+GGG | - | chr8_3:21526310-21526329 | Msa1281800:intron | 30.0% | |
| TGATCAATGGAGGAAAATAT+TGG | - | chr8_3:21526378-21526397 | Msa1281800:CDS | 30.0% | |
| !! | CATGTGTTTCTAGAAAACAA+CGG | - | chr8_3:21526642-21526661 | Msa1281800:CDS | 30.0% |
| GGTCTAAATCTAAATGATGT+AGG | - | chr8_3:21526747-21526766 | Msa1281800:intron | 30.0% | |
| CTAAATCTAAATGATGTAGG+AGG | - | chr8_3:21526750-21526769 | Msa1281800:intron | 30.0% | |
| GGAAATAACAAAACCCTAAT+AGG | + | chr8_3:21526859-21526878 | None:intergenic | 30.0% | |
| !! | AGAGTTTTCTCAATTTTTGG+TGG | - | chr8_3:21526940-21526959 | Msa1281800:intron | 30.0% |
| !! | ATTGTTTCTGTTGTTGTTGT+TGG | + | chr8_3:21527211-21527230 | None:intergenic | 30.0% |
| ACATACTAGTGAATCTGATT+TGG | - | chr8_3:21527341-21527360 | Msa1281800:intron | 30.0% | |
| AAGAACACATGGTAACATTG+CGG | - | chr8_3:21524476-21524495 | Msa1281800:intron | 35.0% | |
| ! | TTTTGAATTGTGTAGGATGG+GGG | - | chr8_3:21524583-21524602 | Msa1281800:intron | 35.0% |
| TTATTGTACCTCAAAGTCAC+CGG | + | chr8_3:21524733-21524752 | None:intergenic | 35.0% | |
| ! | CTTCTAAGGAATGCTTGTAA+CGG | + | chr8_3:21525025-21525044 | None:intergenic | 35.0% |
| ! | AGATGATTTAATGACTTGCC+TGG | + | chr8_3:21525082-21525101 | None:intergenic | 35.0% |
| ! | GCTTCAGTTTTTGCCAATTT+CGG | + | chr8_3:21525295-21525314 | None:intergenic | 35.0% |
| CCTTGTAGTAAGGATTCTAA+TGG | + | chr8_3:21525368-21525387 | None:intergenic | 35.0% | |
| CCATTAGAATCCTTACTACA+AGG | - | chr8_3:21525365-21525384 | Msa1281800:intron | 35.0% | |
| AAGTTCATCCTTACCTTGTT+GGG | - | chr8_3:21525921-21525940 | Msa1281800:CDS | 35.0% | |
| TTGGTTTCTTTCTTGTGGTA+TGG | - | chr8_3:21526009-21526028 | Msa1281800:CDS | 35.0% | |
| TTCTTTCTTGTGGTATGGTT+TGG | - | chr8_3:21526014-21526033 | Msa1281800:CDS | 35.0% | |
| TAGTTGAATGTGCATTCAAG+GGG | - | chr8_3:21526311-21526330 | Msa1281800:intron | 35.0% | |
| TGACCAATGAACATGATCAA+TGG | - | chr8_3:21526365-21526384 | Msa1281800:CDS | 35.0% | |
| !!! | CAAGCTTCATTGGCTTTTAA+GGG | + | chr8_3:21526491-21526510 | None:intergenic | 35.0% |
| !!! | CATGTGTTTTTAGGAAACAC+TGG | + | chr8_3:21526526-21526545 | None:intergenic | 35.0% |
| CAGTGTTTCCTAAAAACACA+TGG | - | chr8_3:21526524-21526543 | Msa1281800:intron | 35.0% | |
| ! | GGTCATTTCCATGTGTTTTT+AGG | + | chr8_3:21526535-21526554 | None:intergenic | 35.0% |
| CTGGCTTATAACCAGAATAT+CGG | + | chr8_3:21526584-21526603 | None:intergenic | 35.0% | |
| ! | ATATTCTGGTTATAAGCCAG+CGG | - | chr8_3:21526584-21526603 | Msa1281800:intron | 35.0% |
| !! | CGTTGTTTTCTAGAAACACA+TGG | + | chr8_3:21526644-21526663 | None:intergenic | 35.0% |
| ATTCTCAAAGCCAATTGCAT+TGG | - | chr8_3:21526679-21526698 | Msa1281800:CDS | 35.0% | |
| AGACCAAAGTCATGAATAGT+TGG | + | chr8_3:21526732-21526751 | None:intergenic | 35.0% | |
| CTAAACAGTTGTAGTCTAAG+AGG | - | chr8_3:21526888-21526907 | Msa1281800:intron | 35.0% | |
| !!! | TCTCAATTTTTGGTGGATTC+TGG | - | chr8_3:21526947-21526966 | Msa1281800:intron | 35.0% |
| GCAACAAACTTGTGAAAACA+GGG | + | chr8_3:21526975-21526994 | None:intergenic | 35.0% | |
| AGCAACAAACTTGTGAAAAC+AGG | + | chr8_3:21526976-21526995 | None:intergenic | 35.0% | |
| ! | AACTTGTTCCATTTCGATCT+AGG | - | chr8_3:21527000-21527019 | Msa1281800:intron | 35.0% |
| GATCACGTTAGAAAAAGAAC+AGG | + | chr8_3:21527084-21527103 | None:intergenic | 35.0% | |
| !!! | TTTTGTCGTCAAAGCATTGA+TGG | + | chr8_3:21527154-21527173 | None:intergenic | 35.0% |
| CAATGCTTTGACGACAAAAT+TGG | - | chr8_3:21527155-21527174 | Msa1281800:intron | 35.0% | |
| ACAACAGAAACAATCAGAAC+AGG | - | chr8_3:21527217-21527236 | Msa1281800:intron | 35.0% | |
| CAACAGAAACAATCAGAACA+GGG | - | chr8_3:21527218-21527237 | Msa1281800:intron | 35.0% | |
| AACAGAAACAATCAGAACAG+GGG | - | chr8_3:21527219-21527238 | Msa1281800:intron | 35.0% | |
| !! | TGATGAGTCGAATTTTTCAG+AGG | - | chr8_3:21527287-21527306 | Msa1281800:intron | 35.0% |
| TCACTAGCAATACTAACATC+AGG | + | chr8_3:21527605-21527624 | None:intergenic | 35.0% | |
| AGATCATTCTTAAAAGCCCC+TGG | + | chr8_3:21523879-21523898 | None:intergenic | 40.0% | |
| ATGGTTGCTAGGAGCAATAA+GGG | + | chr8_3:21524365-21524384 | None:intergenic | 40.0% | |
| AATGGTTGCTAGGAGCAATA+AGG | + | chr8_3:21524366-21524385 | None:intergenic | 40.0% | |
| CAAGTTTCGCATACACGATT+TGG | + | chr8_3:21524534-21524553 | None:intergenic | 40.0% | |
| TTTGGCTAATGTAGCCATCA+AGG | - | chr8_3:21524911-21524930 | Msa1281800:intron | 40.0% | |
| ! | ACTTTTGCTTCCATCCTTGA+TGG | + | chr8_3:21524928-21524947 | None:intergenic | 40.0% |
| ! | TCTTTCACCGGAAGAAGTTT+TGG | - | chr8_3:21524977-21524996 | Msa1281800:intron | 40.0% |
| CTCATTGCCAAAACTTCTTC+CGG | + | chr8_3:21524987-21525006 | None:intergenic | 40.0% | |
| AGCAGCTAGATCTTCTTCTA+AGG | + | chr8_3:21525039-21525058 | None:intergenic | 40.0% | |
| !!! | TTTGGCTCTTTTGCAGCTTT+TGG | - | chr8_3:21525225-21525244 | Msa1281800:intron | 40.0% |
| CTGGTGAGCTCATTTAGATA+TGG | - | chr8_3:21525253-21525272 | Msa1281800:intron | 40.0% | |
| GTGAGCTCATTTAGATATGG+CGG | - | chr8_3:21525256-21525275 | Msa1281800:intron | 40.0% | |
| TGCTGAGATCAATCCGAAAT+TGG | - | chr8_3:21525279-21525298 | Msa1281800:intron | 40.0% | |
| ! | CCTTTGTTATGGAAATGCCA+TGG | + | chr8_3:21525435-21525454 | None:intergenic | 40.0% |
| CCATGGCATTTCCATAACAA+AGG | - | chr8_3:21525432-21525451 | Msa1281800:CDS | 40.0% | |
| TGCATCTGATGACTTTCACA+AGG | - | chr8_3:21525560-21525579 | Msa1281800:CDS | 40.0% | |
| CATGATGTTTAGATTCTGCG+CGG | - | chr8_3:21525741-21525760 | Msa1281800:CDS | 40.0% | |
| GAAGTTCATCCTTACCTTGT+TGG | - | chr8_3:21525920-21525939 | Msa1281800:CDS | 40.0% | |
| AGTTCATCCTTACCTTGTTG+GGG | - | chr8_3:21525922-21525941 | Msa1281800:CDS | 40.0% | |
| CCTCCATTGATCATGTTCAT+TGG | + | chr8_3:21526371-21526390 | None:intergenic | 40.0% | |
| CCAATGAACATGATCAATGG+AGG | - | chr8_3:21526368-21526387 | Msa1281800:CDS | 40.0% | |
| !!! | GCAAGCTTCATTGGCTTTTA+AGG | + | chr8_3:21526492-21526511 | None:intergenic | 40.0% |
| GTGAAAACAGCAAGCTTCAT+TGG | + | chr8_3:21526501-21526520 | None:intergenic | 40.0% | |
| GTTAACTATCGCCGATATTC+TGG | - | chr8_3:21526570-21526589 | Msa1281800:intron | 40.0% | |
| AATGACCAAAAACACCCCAA+CGG | + | chr8_3:21526620-21526639 | None:intergenic | 40.0% | |
| GTTATCTAGGCCAATGCAAT+TGG | + | chr8_3:21526692-21526711 | None:intergenic | 40.0% | |
| GCACCAACTATTCATGACTT+TGG | - | chr8_3:21526726-21526745 | Msa1281800:CDS | 40.0% | |
| GCACTAAACCTAGATCGAAA+TGG | + | chr8_3:21527011-21527030 | None:intergenic | 40.0% | |
| ! | TTTTCTAACGTGATCAGCCA+TGG | - | chr8_3:21527089-21527108 | Msa1281800:intron | 40.0% |
| TTTCTAACGTGATCAGCCAT+GGG | - | chr8_3:21527090-21527109 | Msa1281800:intron | 40.0% | |
| !! | TGAGTCGAATTTTTCAGAGG+TGG | - | chr8_3:21527290-21527309 | Msa1281800:intron | 40.0% |
| ! | TTCTGGAAGCATGTCTCAAA+AGG | + | chr8_3:21527482-21527501 | None:intergenic | 40.0% |
| ! | TTTGAGACATGCTTCCAGAA+TGG | - | chr8_3:21527482-21527501 | Msa1281800:intron | 40.0% |
| CTAGCAATACTAACATCAGG+TGG | + | chr8_3:21527602-21527621 | None:intergenic | 40.0% | |
| GCTCTCCAAAAGGCCTTTAA+AGG | - | chr8_3:21523746-21523765 | Msa1281800:CDS | 45.0% | |
| ! | TTCGCATACACGATTTGGAC+CGG | + | chr8_3:21524529-21524548 | None:intergenic | 45.0% |
| GCTAATGTAGCCATCAAGGA+TGG | - | chr8_3:21524915-21524934 | Msa1281800:intron | 45.0% | |
| ! | GCTCTTTTGCAGCTTTTGGT+TGG | - | chr8_3:21525229-21525248 | Msa1281800:intron | 45.0% |
| !! | TTTGCAGCTTTTGGTTGGAC+TGG | - | chr8_3:21525234-21525253 | Msa1281800:intron | 45.0% |
| GAGTCTTGCTCCTTGTAGTA+AGG | + | chr8_3:21525378-21525397 | None:intergenic | 45.0% | |
| AACCGCTATAGAGATGACCA+TGG | - | chr8_3:21525415-21525434 | Msa1281800:CDS | 45.0% | |
| TGCCATGGTCATCTCTATAG+CGG | + | chr8_3:21525420-21525439 | None:intergenic | 45.0% | |
| GTCATTGATGCATCGAATCG+TGG | + | chr8_3:21525595-21525614 | None:intergenic | 45.0% | |
| CGCGCAGAATCTAAACATCA+TGG | + | chr8_3:21525743-21525762 | None:intergenic | 45.0% | |
| AAGGGCTGAGAAAGACTTGA+AGG | - | chr8_3:21525818-21525837 | Msa1281800:intron | 45.0% | |
| GAGAAACAGTGTTCACCTTG+AGG | - | chr8_3:21525863-21525882 | Msa1281800:intron | 45.0% | |
| GCAGTGGCAAAGGAAATTTC+AGG | - | chr8_3:21525888-21525907 | Msa1281800:intron | 45.0% | |
| TCAATCTTGCTTCCCCAACA+AGG | + | chr8_3:21525937-21525956 | None:intergenic | 45.0% | |
| AGCGGTAGTTAACTACCGTT+GGG | - | chr8_3:21526602-21526621 | Msa1281800:intron | 45.0% | |
| !! | AACTACCGTTGGGGTGTTTT+TGG | - | chr8_3:21526612-21526631 | Msa1281800:CDS | 45.0% |
| ACCAGAATGCTCGGTTATCT+AGG | + | chr8_3:21526705-21526724 | None:intergenic | 45.0% | |
| ATGATACCAACTGACGCAGT+CGG | + | chr8_3:21527050-21527069 | None:intergenic | 45.0% | |
| ! | AAAGCTGCGACTTTTGTCAC+CGG | + | chr8_3:21527123-21527142 | None:intergenic | 45.0% |
| GGCGATGTTAACAACTCTGA+TGG | - | chr8_3:21527176-21527195 | Msa1281800:intron | 45.0% | |
| ACAGGGGATGTGAACCAATT+AGG | - | chr8_3:21527235-21527254 | Msa1281800:intron | 45.0% | |
| CAGGGGATGTGAACCAATTA+GGG | - | chr8_3:21527236-21527255 | Msa1281800:intron | 45.0% | |
| !! | GTCGAATTTTTCAGAGGTGG+AGG | - | chr8_3:21527293-21527312 | Msa1281800:intron | 45.0% |
| ATGTCTCAAAAGGTCGGTCA+AGG | + | chr8_3:21527472-21527491 | None:intergenic | 45.0% | |
| ! | GGAAGCATGTCTCAAAAGGT+CGG | + | chr8_3:21527478-21527497 | None:intergenic | 45.0% |
| ATTGCTAGTGATAAGCCACC+TGG | - | chr8_3:21527614-21527633 | Msa1281800:CDS | 45.0% | |
| AGTGATAAGCCACCTGGTAT+CGG | - | chr8_3:21527620-21527639 | Msa1281800:CDS | 45.0% | |
| GCAACAGGAGAATGGTTGCT+AGG | + | chr8_3:21524376-21524395 | None:intergenic | 50.0% | |
| CTGCATCTGCAACAGGAGAA+TGG | + | chr8_3:21524384-21524403 | None:intergenic | 50.0% | |
| AGAGCTTCTGCATCTGCAAC+AGG | + | chr8_3:21524391-21524410 | None:intergenic | 50.0% | |
| GCAGATGCAGAAGCTCTTCA+CGG | - | chr8_3:21524394-21524413 | Msa1281800:intron | 50.0% | |
| GCTCTTCACGGAGCTTTCAA+AGG | - | chr8_3:21524406-21524425 | Msa1281800:intron | 50.0% | |
| GGCGTTTGAGGATATCCTCT+TGG | + | chr8_3:21524695-21524714 | None:intergenic | 50.0% | |
| ! | GTTCGGATTCAAGGCGTTTG+AGG | + | chr8_3:21524707-21524726 | None:intergenic | 50.0% |
| CTCAAAGTCACCGGAGAGTT+CGG | + | chr8_3:21524724-21524743 | None:intergenic | 50.0% | |
| ATCAGAGAGCTGTGTACCGT+TGG | - | chr8_3:21524859-21524878 | Msa1281800:intron | 50.0% | |
| AAAACAGCATCGCGATCAGC+AGG | + | chr8_3:21524894-21524913 | None:intergenic | 50.0% | |
| !! | TGCTGATCGCGATGCTGTTT+TGG | - | chr8_3:21524893-21524912 | Msa1281800:intron | 50.0% |
| GATCTAGCTGCTCATACCAC+CGG | - | chr8_3:21525047-21525066 | Msa1281800:intron | 50.0% | |
| TGCGCTGAAAAGGGTTGGAA+CGG | - | chr8_3:21525764-21525783 | Msa1281800:CDS | 50.0% | |
| AGGGTTGGAACGGATGAAGA+TGG | - | chr8_3:21525774-21525793 | Msa1281800:CDS | 50.0% | |
| !! | TGAAGATGGACTGACTCGTG+TGG | - | chr8_3:21525788-21525807 | Msa1281800:intron | 50.0% |
| TGTTCACCTTGAGGATGCAG+TGG | - | chr8_3:21525872-21525891 | Msa1281800:intron | 50.0% | |
| CTTGCTTCCCCAACAAGGTA+AGG | + | chr8_3:21525932-21525951 | None:intergenic | 50.0% | |
| CAACGGTAGTTAACTACCGC+TGG | + | chr8_3:21526603-21526622 | None:intergenic | 50.0% | |
| CAGCGGTAGTTAACTACCGT+TGG | - | chr8_3:21526601-21526620 | Msa1281800:intron | 50.0% | |
| GCGGTAGTTAACTACCGTTG+GGG | - | chr8_3:21526603-21526622 | Msa1281800:intron | 50.0% | |
| GCCTAGATAACCGAGCATTC+TGG | - | chr8_3:21526701-21526720 | Msa1281800:CDS | 50.0% | |
| ! | GCGTCAGTTGGTATCATAGC+AGG | - | chr8_3:21527053-21527072 | Msa1281800:intron | 50.0% |
| ATCAGCCATGGGAGATCAAC+CGG | - | chr8_3:21527101-21527120 | Msa1281800:intron | 50.0% | |
| !! | CGTCAAAGCATTGATGGTCG+CGG | + | chr8_3:21527148-21527167 | None:intergenic | 50.0% |
| GAACCAATTAGGGCTTCACG+TGG | - | chr8_3:21527246-21527265 | Msa1281800:intron | 50.0% | |
| CTACCACGTGAAGCCCTAAT+TGG | + | chr8_3:21527252-21527271 | None:intergenic | 50.0% | |
| AGACATGCTTCCAGAATGGC+AGG | - | chr8_3:21527486-21527505 | Msa1281800:intron | 50.0% | |
| AAGCGAGTTACCTGCCATTC+TGG | + | chr8_3:21527499-21527518 | None:intergenic | 50.0% | |
| GGCAGGTAACTCGCTTAAGA+CGG | - | chr8_3:21527503-21527522 | Msa1281800:intron | 50.0% | |
| CCAACAATACCGATACCAGG+TGG | + | chr8_3:21527632-21527651 | None:intergenic | 50.0% | |
| !! | CCACCTGGTATCGGTATTGT+TGG | - | chr8_3:21527629-21527648 | Msa1281800:CDS | 50.0% |
| !! | CCTGGTATCGGTATTGTTGG+CGG | - | chr8_3:21527632-21527651 | Msa1281800:CDS | 50.0% |
| ATCTCCTGTGGAAGACGCTG+AGG | - | chr8_3:21523724-21523743 | Msa1281800:CDS | 55.0% | |
| AGACGCTGAGGCTCTCCAAA+AGG | - | chr8_3:21523736-21523755 | Msa1281800:CDS | 55.0% | |
| CGCCTTGAATCCGAACTCTC+CGG | - | chr8_3:21524711-21524730 | Msa1281800:intron | 55.0% | |
| CACCGGAGAGTTCGGATTCA+AGG | + | chr8_3:21524716-21524735 | None:intergenic | 55.0% | |
| CGAACTCTCCGGTGACTTTG+AGG | - | chr8_3:21524722-21524741 | Msa1281800:intron | 55.0% | |
| AGCTGTGTACCGTTGGATGC+TGG | - | chr8_3:21524866-21524885 | Msa1281800:intron | 55.0% | |
| CAGCAGGTTCCAGCATCCAA+CGG | + | chr8_3:21524878-21524897 | None:intergenic | 55.0% | |
| ACTTGCCTGGCGAAGATGAC+CGG | + | chr8_3:21525069-21525088 | None:intergenic | 55.0% | |
| !! | AGATGGACTGACTCGTGTGG+TGG | - | chr8_3:21525791-21525810 | Msa1281800:intron | 55.0% |
| ! | TGACTCGTGTGGTGGTGACA+AGG | - | chr8_3:21525799-21525818 | Msa1281800:intron | 55.0% |
| ! | GACTCGTGTGGTGGTGACAA+GGG | - | chr8_3:21525800-21525819 | Msa1281800:intron | 55.0% |
| CCTTTGCCACTGCATCCTCA+AGG | + | chr8_3:21525881-21525900 | None:intergenic | 55.0% | |
| CCTTGAGGATGCAGTGGCAA+AGG | - | chr8_3:21525878-21525897 | Msa1281800:intron | 55.0% | |
| GTTGGTGCGACCAGAATGCT+CGG | + | chr8_3:21526714-21526733 | None:intergenic | 55.0% | |
| ! | TGTCACCGGTTGATCTCCCA+TGG | + | chr8_3:21527109-21527128 | None:intergenic | 55.0% |
| CCGCCAACAATACCGATACC+AGG | + | chr8_3:21527635-21527654 | None:intergenic | 55.0% | |
| AGAGCCTCAGCGTCTTCCAC+AGG | + | chr8_3:21523731-21523750 | None:intergenic | 60.0% | |
| TACCACCGGTCATCTTCGCC+AGG | - | chr8_3:21525061-21525080 | Msa1281800:intron | 60.0% | |
| TTCTGCGCGGTGCGCTGAAA+AGG | - | chr8_3:21525754-21525773 | Msa1281800:CDS | 60.0% | |
| TCTGCGCGGTGCGCTGAAAA+GGG | - | chr8_3:21525755-21525774 | Msa1281800:CDS | 60.0% | |
| ! | ACTGACGCAGTCGGAAGCGT+AGG | + | chr8_3:21527041-21527060 | None:intergenic | 60.0% |
| ACGCTTCCGACTGCGTCAGT+TGG | - | chr8_3:21527041-21527060 | Msa1281800:intron | 60.0% | |
| TGCCTGGCGAAGATGACCGG+TGG | + | chr8_3:21525066-21525085 | None:intergenic | 65.0% | |
| CGCGGTGCGCTGAAAAGGGT+TGG | - | chr8_3:21525759-21525778 | Msa1281800:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 21523680 | 21527670 | 21523680 | ID=Msa1281800;Name=Msa1281800 |
| chr8_3 | mRNA | 21523680 | 21527670 | 21523680 | ID=Msa1281800-mRNA-1;Parent=Msa1281800;Name=Msa1281800-mRNA-1;_AED=0.39;_eAED=0.39;_QI=18|0.57|0.37|1|0.57|0.5|8|0|359 |
| chr8_3 | exon | 21523680 | 21523782 | 21523680 | ID=Msa1281800-mRNA-1:exon:7852;Parent=Msa1281800-mRNA-1 |
| chr8_3 | exon | 21523794 | 21523937 | 21523794 | ID=Msa1281800-mRNA-1:exon:7851;Parent=Msa1281800-mRNA-1 |
| chr8_3 | exon | 21525413 | 21525597 | 21525413 | ID=Msa1281800-mRNA-1:exon:7850;Parent=Msa1281800-mRNA-1 |
| chr8_3 | exon | 21525715 | 21525804 | 21525715 | ID=Msa1281800-mRNA-1:exon:7849;Parent=Msa1281800-mRNA-1 |
| chr8_3 | exon | 21525897 | 21526109 | 21525897 | ID=Msa1281800-mRNA-1:exon:7848;Parent=Msa1281800-mRNA-1 |
| chr8_3 | exon | 21526358 | 21526486 | 21526358 | ID=Msa1281800-mRNA-1:exon:7847;Parent=Msa1281800-mRNA-1 |
| chr8_3 | exon | 21526607 | 21526752 | 21526607 | ID=Msa1281800-mRNA-1:exon:7846;Parent=Msa1281800-mRNA-1 |
| chr8_3 | exon | 21527583 | 21527670 | 21527583 | ID=Msa1281800-mRNA-1:exon:7845;Parent=Msa1281800-mRNA-1 |
| chr8_3 | five_prime_UTR | 21527653 | 21527670 | 21527653 | ID=Msa1281800-mRNA-1:five_prime_utr;Parent=Msa1281800-mRNA-1 |
| chr8_3 | CDS | 21527583 | 21527652 | 21527583 | ID=Msa1281800-mRNA-1:cds;Parent=Msa1281800-mRNA-1 |
| chr8_3 | CDS | 21526607 | 21526752 | 21526607 | ID=Msa1281800-mRNA-1:cds;Parent=Msa1281800-mRNA-1 |
| chr8_3 | CDS | 21526358 | 21526486 | 21526358 | ID=Msa1281800-mRNA-1:cds;Parent=Msa1281800-mRNA-1 |
| chr8_3 | CDS | 21525897 | 21526109 | 21525897 | ID=Msa1281800-mRNA-1:cds;Parent=Msa1281800-mRNA-1 |
| chr8_3 | CDS | 21525715 | 21525804 | 21525715 | ID=Msa1281800-mRNA-1:cds;Parent=Msa1281800-mRNA-1 |
| chr8_3 | CDS | 21525413 | 21525597 | 21525413 | ID=Msa1281800-mRNA-1:cds;Parent=Msa1281800-mRNA-1 |
| chr8_3 | CDS | 21523794 | 21523937 | 21523794 | ID=Msa1281800-mRNA-1:cds;Parent=Msa1281800-mRNA-1 |
| chr8_3 | CDS | 21523680 | 21523782 | 21523680 | ID=Msa1281800-mRNA-1:cds;Parent=Msa1281800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
