AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0496070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0496070 MtrunA17_Chr3g0090131 87.602 492 16 1 1 447 1 492 0.0 875
Msa0496070 MtrunA17_Chr3g0090111 78.455 492 58 3 1 447 1 489 0.0 784
Msa0496070 MtrunA17_Chr4g0043091 48.218 477 188 5 20 438 27 502 4.64e-158 456
Msa0496070 MtrunA17_Chr4g0042171 46.347 479 197 5 19 438 22 499 3.88e-149 434
Msa0496070 MtrunA17_Chr6g0482131 46.639 476 196 5 21 438 36 511 3.93e-148 432
Msa0496070 MtrunA17_Chr6g0482941 47.034 472 191 6 21 437 43 510 2.70e-144 422
Msa0496070 MtrunA17_Chr6g0482951 46.610 472 193 6 21 437 43 510 3.96e-144 421
Msa0496070 MtrunA17_Chr6g0482071 45.798 476 200 5 21 438 37 512 8.71e-143 418
Msa0496070 MtrunA17_Chr2g0329191 45.607 478 201 6 19 438 32 508 3.64e-142 416
Msa0496070 MtrunA17_Chr2g0329201 45.607 478 202 6 19 438 29 506 2.23e-141 414
Msa0496070 MtrunA17_Chr4g0033321 45.643 482 203 5 21 444 33 513 1.73e-140 412
Msa0496070 MtrunA17_Chr4g0033271 45.073 477 202 7 21 438 35 510 2.92e-139 409
Msa0496070 MtrunA17_Chr3g0087261 42.324 482 222 4 14 440 30 510 3.88e-139 408
Msa0496070 MtrunA17_Chr4g0033201 43.724 478 211 5 19 438 34 511 6.67e-139 408
Msa0496070 MtrunA17_Chr4g0033331 44.328 476 207 5 20 437 38 513 7.14e-139 408
Msa0496070 MtrunA17_Chr4g0033311 44.025 477 207 6 21 438 39 514 1.97e-138 407
Msa0496070 MtrunA17_Chr4g0033401 45.168 476 203 5 20 437 33 508 2.49e-138 407
Msa0496070 MtrunA17_Chr4g0010501 44.211 475 205 7 20 438 23 493 4.13e-138 405
Msa0496070 MtrunA17_Chr3g0087271 42.616 474 216 4 22 440 39 511 7.73e-136 400
Msa0496070 MtrunA17_Chr4g0033341 43.671 474 211 5 21 438 69 542 9.44e-135 398
Msa0496070 MtrunA17_Chr4g0033261 43.100 471 202 5 18 438 38 492 4.64e-133 392
Msa0496070 MtrunA17_Chr3g0088441 42.259 478 216 6 20 438 37 513 5.80e-133 393
Msa0496070 MtrunA17_Chr2g0317841 42.505 487 219 5 19 447 30 513 5.94e-131 388
Msa0496070 MtrunA17_Chr4g0033191 41.822 483 223 5 20 444 42 524 6.68e-130 385
Msa0496070 MtrunA17_Chr6g0482081 42.292 480 214 6 20 438 35 512 8.78e-129 382
Msa0496070 MtrunA17_Chr4g0033231 42.251 471 206 5 18 438 38 492 2.10e-128 380
Msa0496070 MtrunA17_Chr2g0317821 43.121 487 216 6 19 447 30 513 2.53e-128 381
Msa0496070 MtrunA17_Chr2g0288021 41.856 485 224 6 18 445 32 515 1.04e-126 377
Msa0496070 MtrunA17_Chr2g0329321 42.050 478 193 7 19 438 36 487 5.20e-126 374
Msa0496070 MtrunA17_Chr4g0074551 44.025 477 209 8 19 438 48 523 2.68e-125 375
Msa0496070 MtrunA17_Chr4g0006971 40.860 465 227 5 22 439 28 491 4.18e-124 370
Msa0496070 MtrunA17_Chr4g0074561 42.797 472 209 6 26 437 40 510 2.15e-123 369
Msa0496070 MtrunA17_Chr4g0006111 40.541 481 212 5 20 442 64 528 8.43e-122 365
Msa0496070 MtrunA17_Chr7g0242691 40.430 465 229 6 21 438 31 494 2.35e-121 363
Msa0496070 MtrunA17_Chr2g0288071 43.432 472 208 5 24 437 70 540 2.47e-120 362
Msa0496070 MtrunA17_Chr7g0242681 40.860 465 226 7 21 438 38 500 8.50e-120 360
Msa0496070 MtrunA17_Chr1g0195611 39.400 467 233 6 19 438 25 488 4.13e-119 357
Msa0496070 MtrunA17_Chr5g0428831 40.430 465 226 8 22 438 28 489 5.12e-118 355
Msa0496070 MtrunA17_Chr5g0430451 42.680 485 185 9 21 438 39 497 8.25e-118 353
Msa0496070 MtrunA17_Chr4g0006131 39.076 476 217 8 20 438 41 500 1.82e-111 337
Msa0496070 MtrunA17_Chr5g0418871 49.408 338 149 5 42 366 4 332 3.01e-109 326
Msa0496070 MtrunA17_Chr1g0195641 46.945 311 151 3 23 322 29 336 2.26e-99 303
Msa0496070 MtrunA17_Chr7g0234091 37.446 462 237 5 22 437 76 531 1.55e-98 305
Msa0496070 MtrunA17_Chr7g0234111 37.013 462 239 6 22 437 76 531 6.21e-98 303
Msa0496070 MtrunA17_Chr7g0234131 35.637 463 245 6 22 437 76 532 2.41e-92 289
Msa0496070 MtrunA17_Chr2g0301231 37.656 401 178 6 94 438 7 391 1.11e-83 262
Msa0496070 MtrunA17_Chr7g0230651 41.971 274 154 2 60 328 11 284 3.40e-77 245
Msa0496070 MtrunA17_Chr3g0087201 40.979 327 136 5 165 437 19 342 2.43e-75 239
Msa0496070 MtrunA17_Chr7g0227561 37.736 265 136 3 23 283 48 287 3.28e-59 196
Msa0496070 MtrunA17_Chr3g0087191 57.047 149 62 2 16 162 17 165 8.94e-56 182
Msa0496070 MtrunA17_Chr7g0236731 40.455 220 126 2 114 328 34 253 1.06e-49 170
Msa0496070 MtrunA17_Chr5g0418861 46.667 90 47 1 349 437 1 90 1.15e-24 97.4
Msa0496070 MtrunA17_Chr4g0068871 25.926 378 234 10 84 440 183 535 3.12e-23 102
Msa0496070 MtrunA17_Chr8g0352881 36.364 88 56 0 235 322 57 144 6.20e-15 72.4
Msa0496070 MtrunA17_Chr8g0352881 56.364 55 24 0 28 82 5 59 2.22e-14 70.9
Msa0496070 MtrunA17_Chr7g0227591 43.103 58 33 0 384 441 12 69 5.95e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0496070 AT5G36890.1 63.347 472 126 2 23 447 18 489 0.0 625
Msa0496070 AT5G36890.2 63.617 470 123 3 23 444 18 487 0.0 620
Msa0496070 AT3G18080.1 45.992 474 196 6 21 438 39 508 1.94e-146 427
Msa0496070 AT3G18070.3 44.937 474 193 6 21 438 30 491 9.97e-144 420
Msa0496070 AT3G18070.1 45.148 474 198 6 21 438 30 497 1.11e-142 417
Msa0496070 AT5G54570.1 44.676 479 204 6 19 437 28 505 5.69e-141 414
Msa0496070 AT1G26560.1 44.286 490 187 7 20 437 31 506 9.74e-139 408
Msa0496070 AT2G44480.1 43.750 480 211 8 21 442 35 513 4.83e-137 404
Msa0496070 AT2G44480.3 43.750 480 211 8 21 442 66 544 9.64e-137 404
Msa0496070 AT2G44450.1 45.073 477 207 7 20 442 30 505 5.29e-135 398
Msa0496070 AT3G60140.1 43.215 479 212 5 20 438 25 503 1.59e-134 399
Msa0496070 AT5G44640.1 43.841 479 205 7 20 439 30 503 4.88e-133 393
Msa0496070 AT2G25630.1 45.217 460 205 7 20 437 29 483 1.42e-132 391
Msa0496070 AT5G42260.1 44.397 473 199 7 20 433 30 497 2.97e-130 386
Msa0496070 AT2G44470.3 42.138 477 216 7 21 437 29 505 1.48e-129 387
Msa0496070 AT1G02850.2 41.901 463 220 6 22 438 27 486 2.60e-129 383
Msa0496070 AT3G60130.1 41.667 480 216 8 18 438 27 501 4.29e-127 378
Msa0496070 AT5G24550.1 43.006 479 212 8 21 438 32 510 9.14e-127 378
Msa0496070 AT1G02850.5 39.918 486 220 7 22 438 27 509 3.62e-124 371
Msa0496070 AT1G61820.1 42.887 478 213 9 24 442 33 509 1.43e-122 367
Msa0496070 AT1G02850.4 39.836 487 220 8 22 438 27 510 2.38e-122 366
Msa0496070 AT5G24540.1 44.259 479 206 7 21 438 32 510 2.55e-122 367
Msa0496070 AT4G21760.1 43.392 454 214 5 26 437 59 511 9.63e-122 365
Msa0496070 AT4G21760.2 41.810 464 217 4 26 437 59 521 2.07e-119 359
Msa0496070 AT4G27830.1 39.829 467 232 7 18 437 20 484 3.44e-118 355
Msa0496070 AT1G02850.1 39.741 463 203 7 22 438 27 459 1.76e-117 352
Msa0496070 AT1G51470.1 39.754 488 238 8 2 437 26 509 2.67e-117 353
Msa0496070 AT1G61810.1 41.408 483 223 8 21 444 33 514 3.58e-117 353
Msa0496070 AT1G47600.2 39.836 487 238 8 2 437 26 508 4.35e-117 352
Msa0496070 AT1G47600.1 39.754 488 238 8 2 437 26 509 7.06e-117 352
Msa0496070 AT5G54570.3 52.050 317 140 3 18 323 27 342 1.39e-115 347
Msa0496070 AT2G32860.2 40.292 479 225 7 20 437 93 571 2.55e-115 351
Msa0496070 AT2G32860.1 40.377 478 225 8 20 437 93 570 1.43e-114 349
Msa0496070 AT1G45191.4 38.574 477 241 7 7 438 15 484 7.14e-114 344
Msa0496070 AT2G44460.1 41.494 482 220 8 23 444 31 510 7.85e-114 346
Msa0496070 AT1G45191.6 38.066 486 242 8 7 438 15 495 5.23e-113 342
Msa0496070 AT1G45191.2 38.302 483 240 7 7 438 15 490 5.97e-113 342
Msa0496070 AT3G62750.1 40.000 455 229 6 22 437 24 473 1.47e-112 340
Msa0496070 AT3G62750.2 40.000 455 229 6 22 437 50 499 3.33e-112 340
Msa0496070 AT1G45191.1 37.652 494 245 8 7 438 15 507 7.60e-112 340
Msa0496070 AT2G44480.2 41.606 411 184 6 88 442 1 411 8.52e-112 335
Msa0496070 AT3G18070.4 49.068 322 152 3 21 333 30 348 1.33e-111 334
Msa0496070 AT1G61810.3 42.105 456 205 7 21 417 33 488 3.02e-111 338
Msa0496070 AT4G22100.1 38.186 474 239 7 23 447 24 492 5.89e-111 337
Msa0496070 AT1G60090.1 37.732 485 235 7 12 438 15 490 1.41e-110 336
Msa0496070 AT1G66280.1 40.166 483 225 8 20 441 35 514 2.92e-110 335
Msa0496070 AT4G27820.1 39.744 468 229 7 18 437 20 482 3.15e-110 335
Msa0496070 AT5G54570.2 42.611 406 173 5 91 437 4 408 5.62e-110 332
Msa0496070 AT3G60120.1 38.571 490 238 8 9 438 4 490 1.32e-108 332
Msa0496070 AT2G44490.1 37.996 479 233 8 23 438 16 493 1.42e-108 332
Msa0496070 AT5G25980.2 37.988 487 238 8 13 439 42 524 1.72e-108 332
Msa0496070 AT3G62740.1 38.562 459 235 7 22 437 24 478 8.08e-108 328
Msa0496070 AT1G75940.1 39.592 490 220 9 22 441 38 521 1.26e-107 329
Msa0496070 AT1G66270.1 39.545 483 228 8 20 441 35 514 1.71e-107 328
Msa0496070 AT1G60090.2 37.736 477 237 6 13 438 16 483 8.59e-107 326
Msa0496070 AT1G52400.3 38.382 482 233 7 19 438 37 516 3.64e-106 325
Msa0496070 AT1G52400.1 38.382 482 233 7 19 438 37 516 3.64e-106 325
Msa0496070 AT2G44470.2 47.975 321 155 3 21 329 29 349 2.76e-105 318
Msa0496070 AT5G26000.1 38.677 499 239 11 2 437 17 511 5.06e-105 322
Msa0496070 AT2G44470.1 47.975 321 155 3 21 329 29 349 1.25e-104 318
Msa0496070 AT1G66270.2 39.130 483 228 9 20 441 35 512 4.73e-104 319
Msa0496070 AT3G60140.2 48.137 322 155 3 20 329 25 346 5.97e-104 317
Msa0496070 AT5G28510.1 38.320 488 235 9 19 441 37 523 1.65e-103 318
Msa0496070 AT3G60130.3 40.199 403 191 6 82 438 40 438 8.32e-102 311
Msa0496070 AT1G02850.3 42.049 371 175 5 22 355 27 394 3.47e-101 309
Msa0496070 AT3G03640.1 37.006 481 235 10 23 438 36 513 2.17e-100 310
Msa0496070 AT3G60130.2 39.130 414 191 6 82 438 40 449 7.59e-100 306
Msa0496070 AT2G44480.4 48.397 312 147 5 21 320 66 375 1.01e-99 304
Msa0496070 AT1G45191.3 44.880 332 169 3 7 329 15 341 6.45e-98 300
Msa0496070 AT1G45191.5 44.880 332 169 3 7 329 15 341 8.53e-98 300
Msa0496070 AT3G62750.7 46.429 308 159 3 22 328 24 326 1.80e-94 290
Msa0496070 AT3G62750.8 46.429 308 159 3 22 328 24 326 1.80e-94 290
Msa0496070 AT1G60270.1 43.558 326 171 3 12 328 15 336 2.27e-94 290
Msa0496070 AT3G62740.2 45.687 313 160 4 22 328 24 332 3.11e-94 291
Msa0496070 AT5G24540.2 48.750 320 152 3 21 328 32 351 7.52e-94 291
Msa0496070 AT1G61810.4 46.749 323 161 3 21 332 33 355 2.54e-93 288
Msa0496070 AT5G25980.3 43.452 336 173 5 13 335 42 373 2.63e-93 290
Msa0496070 AT5G25980.1 43.452 336 173 5 13 335 42 373 2.63e-93 290
Msa0496070 AT3G62750.4 38.958 403 203 5 22 386 50 447 2.74e-93 290
Msa0496070 AT3G62750.3 46.429 308 159 3 22 328 50 352 4.32e-93 288
Msa0496070 AT5G26000.2 44.379 338 170 5 2 324 17 351 7.25e-92 286
Msa0496070 AT1G61810.5 39.563 412 190 7 91 444 4 414 1.07e-91 284
Msa0496070 AT4G27830.2 38.035 397 198 6 88 437 1 396 3.85e-91 283
Msa0496070 AT3G21370.1 42.947 319 166 4 19 323 31 347 6.48e-87 275
Msa0496070 AT3G21370.1 48.387 93 44 2 349 440 425 514 2.11e-17 85.1
Msa0496070 AT3G09260.1 43.168 322 170 4 20 329 34 354 1.49e-86 274
Msa0496070 AT3G09260.1 48.718 78 39 1 365 441 437 514 2.30e-14 75.5
Msa0496070 AT1G52400.2 39.948 383 206 7 19 385 37 411 5.16e-86 271
Msa0496070 AT3G62750.6 37.275 389 204 5 88 437 1 388 2.16e-84 265
Msa0496070 AT3G62750.5 37.275 389 204 5 88 437 1 388 2.16e-84 265
Msa0496070 AT4G27820.2 37.688 398 199 6 88 437 1 397 3.03e-83 262
Msa0496070 AT4G27820.3 37.688 398 199 6 88 437 1 397 3.03e-83 262
Msa0496070 AT3G18070.2 42.857 322 125 4 173 438 102 420 2.76e-82 260
Msa0496070 AT3G18070.2 44.737 76 42 0 21 96 30 105 4.61e-16 80.5
Msa0496070 AT5G48375.1 36.493 422 220 9 2 402 17 411 6.20e-81 257
Msa0496070 AT1G61810.2 47.426 272 133 2 21 282 33 304 9.80e-81 252
Msa0496070 AT2G44450.2 38.983 354 165 4 140 442 1 354 2.20e-79 250
Msa0496070 AT1G61820.3 37.568 370 168 6 133 442 4 370 1.93e-76 243
Msa0496070 AT3G18070.7 41.801 311 122 4 184 438 1 308 6.49e-76 240
Msa0496070 AT1G51490.1 43.269 312 154 10 29 328 28 328 5.64e-72 233
Msa0496070 AT2G44460.2 39.891 366 159 7 138 444 1 364 1.36e-69 227
Msa0496070 AT2G44480.5 38.033 305 134 5 193 442 3 307 8.72e-68 219
Msa0496070 AT1G60270.2 43.673 245 128 2 93 328 6 249 4.11e-67 216
Msa0496070 AT3G18070.5 48.235 170 79 1 173 333 102 271 9.63e-51 175
Msa0496070 AT3G18070.5 44.737 76 42 0 21 96 30 105 2.41e-16 80.5
Msa0496070 AT3G18070.6 46.541 159 76 1 184 333 1 159 1.36e-44 155
Msa0496070 AT5G16580.1 32.847 274 141 6 164 394 26 299 3.70e-40 146
Msa0496070 AT3G06510.1 26.440 382 229 14 83 440 159 512 5.39e-23 102

Find 102 sgRNAs with CRISPR-Local

Find 434 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATCCTCCTCCGAGAATT+TGG 0.134106 3_4:-26273594 None:intergenic
ATCAATGCTCTTCTTGAAAA+AGG 0.186679 3_4:+26272168 Msa0496070:CDS
CTTGTACTTGCTTCGGTAAA+TGG 0.219549 3_4:-26272886 None:intergenic
GAAGAATTTCTGAGAGAAAA+TGG 0.220328 3_4:+26268867 Msa0496070:CDS
GATACTTGCTTTGCAAGTTT+TGG 0.249512 3_4:+26272705 Msa0496070:CDS
ACCTCGTTGTATAGTGATTT+AGG 0.261744 3_4:-26273649 None:intergenic
TTGAATTCTTTGGACTTCAT+TGG 0.280186 3_4:+26273626 Msa0496070:CDS
TTCTTGCATCCACTATATTA+TGG 0.285971 3_4:+26273527 Msa0496070:CDS
AGTCGCCACTTCTGCTTATC+AGG 0.289635 3_4:+26268953 Msa0496070:CDS
TCTTCAATCTTATCAGAGTT+TGG 0.311629 3_4:-26273164 None:intergenic
ACCCAAAGTCTTCTGCATAT+TGG 0.333496 3_4:+26275712 Msa0496070:CDS
GGCATATGAAATATAAGATT+TGG 0.334334 3_4:-26275918 None:intergenic
GTGGTAGAGGTCCTAGTATA+TGG 0.341211 3_4:+26270404 Msa0496070:CDS
TGATGATGTGCTGCTAAGTA+TGG 0.341542 3_4:-26272837 None:intergenic
ACCAATATGCAGAAGACTTT+GGG 0.355117 3_4:-26275713 None:intergenic
TATGTCATTATTTGGATGCT+TGG 0.359997 3_4:+26275855 Msa0496070:three_prime_UTR
TCATCTAGCATCTCATTTAG+TGG 0.371886 3_4:-26274785 None:intergenic
TGCTTATTTCTATAGATAGA+AGG 0.374326 3_4:+26270367 Msa0496070:intron
TTCCCTTCTGACTTCATCTT+CGG 0.378844 3_4:+26268930 Msa0496070:CDS
TGATCATTATCATCGTTATA+AGG 0.400828 3_4:+26270556 Msa0496070:CDS
TTATCCTCCTCCGAGAATTT+GGG 0.401648 3_4:-26273593 None:intergenic
ACCCACCAACTGCGGTTTGA+AGG 0.428874 3_4:-26272764 None:intergenic
GGCTGGTTGTAGACTCTGAA+TGG 0.429555 3_4:+26273135 Msa0496070:CDS
GTTTGACCTTGTACTTGCTT+CGG 0.440391 3_4:-26272893 None:intergenic
TATTGATCTTATAGCCAAGT+TGG 0.446830 3_4:+26270960 Msa0496070:CDS
AGAGTAGCTGTGAACATTGA+AGG 0.451848 3_4:+26268823 Msa0496070:five_prime_UTR
AACCAATATGCAGAAGACTT+TGG 0.453110 3_4:-26275714 None:intergenic
GCACAACAGCTGGACAGAAT+TGG 0.456329 3_4:+26273719 Msa0496070:CDS
GCTAGCAAGGAGGGTGGTAG+AGG 0.457690 3_4:+26270391 Msa0496070:CDS
AGACCGACTTCCCAAATTCT+CGG 0.460952 3_4:+26273583 Msa0496070:CDS
AGTCGTTCACGCATAACTTC+AGG 0.461199 3_4:-26273557 None:intergenic
ATTGATCTTATAGCCAAGTT+GGG 0.461829 3_4:+26270961 Msa0496070:CDS
CCCCTTCAAACCGCAGTTGG+TGG 0.465082 3_4:+26272762 Msa0496070:CDS
CTTGTCGTAATGACATTCTT+CGG 0.465885 3_4:-26273696 None:intergenic
ATAGACCAATCCGAAGCGTT+TGG 0.469827 3_4:-26275661 None:intergenic
AGCAGCACATCATCAAATCT+TGG 0.471284 3_4:+26272845 Msa0496070:CDS
ACTGCATCTTGATGAGTCAA+TGG 0.476677 3_4:+26272308 Msa0496070:CDS
TTTCGCGGTTTCTTAAAGAT+GGG 0.480453 3_4:+26275736 Msa0496070:CDS
TTACGACAAGGCACAACAGC+TGG 0.483666 3_4:+26273709 Msa0496070:CDS
CATTTACCGAAGCAAGTACA+AGG 0.483784 3_4:+26272887 Msa0496070:CDS
CAAGGTTATACCAAACGCTT+CGG 0.487707 3_4:+26275651 Msa0496070:CDS
GCATAGGCATCCCATATACT+AGG 0.491716 3_4:-26270415 None:intergenic
TTTATGGGTGTAGATGGCTT+AGG 0.494310 3_4:+26272102 Msa0496070:intron
CCCACCAACTGCGGTTTGAA+GGG 0.498031 3_4:-26272763 None:intergenic
ACCAGCCAAGACGAAAATCT+AGG 0.501744 3_4:-26273208 None:intergenic
ATCAAGCAATTGAGCTCAAG+TGG 0.503129 3_4:+26275994 Msa0496070:three_prime_UTR
TAAAGATGGGGCAAACAAGA+AGG 0.505631 3_4:+26275749 Msa0496070:CDS
GGAACCAATGTCAATGATGA+AGG 0.509270 3_4:+26272123 Msa0496070:CDS
AATGGAAACAGCTGCTGCAT+GGG 0.515763 3_4:-26272868 None:intergenic
ATTACTTGACAACTTCGAAT+GGG 0.517605 3_4:+26275626 Msa0496070:CDS
CAATGGTACAAAGTTACAAA+AGG 0.518258 3_4:-26272276 None:intergenic
CTGCATCTTGATGAGTCAAT+GGG 0.519946 3_4:+26272309 Msa0496070:CDS
GGATAGTCTCCATAATATAG+TGG 0.522297 3_4:-26273536 None:intergenic
TTATACCAAACGCTTCGGAT+TGG 0.523284 3_4:+26275656 Msa0496070:CDS
GCTGGTTGTAGACTCTGAAT+GGG 0.524122 3_4:+26273136 Msa0496070:CDS
ATAGATAGAAGGTGCTAGCA+AGG 0.527398 3_4:+26270378 Msa0496070:intron
CCCTTCAAACCGCAGTTGGT+GGG 0.530206 3_4:+26272763 Msa0496070:CDS
ATACCTTGCATCACTTGTGC+AGG 0.530616 3_4:+26274835 Msa0496070:CDS
GTATTTGGTAAGACACATAA+TGG 0.534050 3_4:-26275803 None:intergenic
AAATGGAAACAGCTGCTGCA+TGG 0.536683 3_4:-26272869 None:intergenic
CATTACTTGACAACTTCGAA+TGG 0.539797 3_4:+26275625 Msa0496070:CDS
TGGTAGAGGTCCTAGTATAT+GGG 0.543561 3_4:+26270405 Msa0496070:CDS
GATGCTGGAGTTAATGCTCC+TGG 0.547337 3_4:+26272789 Msa0496070:CDS
ATAGAAGGTGCTAGCAAGGA+GGG 0.552629 3_4:+26270382 Msa0496070:CDS
GCAGTTGGTGGGTATGATGC+TGG 0.554523 3_4:+26272774 Msa0496070:CDS
CTGCGAGTTCGCTATTACAA+GGG 0.562943 3_4:+26274812 Msa0496070:CDS
GACAACTTCGAATGGGCTCA+AGG 0.563677 3_4:+26275633 Msa0496070:CDS
ACTGCGAGTTCGCTATTACA+AGG 0.565427 3_4:+26274811 Msa0496070:CDS
TATGCCTTCATCATTGACAT+TGG 0.565847 3_4:-26272127 None:intergenic
ATCTAGGTGTCTCGCAGCAG+CGG 0.565847 3_4:-26273192 None:intergenic
CCTCCGAGAATTTGGGAAGT+CGG 0.566416 3_4:-26273586 None:intergenic
TTCGCGGTTTCTTAAAGATG+GGG 0.576695 3_4:+26275737 Msa0496070:CDS
ACTCCGAAGATGAAGTCAGA+AGG 0.587435 3_4:-26268933 None:intergenic
GTACGCGTTGAAACCCAACT+TGG 0.588904 3_4:-26270974 None:intergenic
GATGCCTATGCTTATACTGA+AGG 0.593156 3_4:+26270427 Msa0496070:CDS
GAGCCCCTTCAAACCGCAGT+TGG 0.595137 3_4:+26272759 Msa0496070:CDS
AAAGATGGGGCAAACAAGAA+GGG 0.597402 3_4:+26275750 Msa0496070:CDS
ACTTCCCAAATTCTCGGAGG+AGG 0.598018 3_4:+26273589 Msa0496070:CDS
CCACCAACTGCGGTTTGAAG+GGG 0.600742 3_4:-26272762 None:intergenic
ACATTGAAGGAGTTTCAGAA+TGG 0.605695 3_4:+26268836 Msa0496070:exon
AAAATACTCGACAAAAGCAA+TGG 0.611643 3_4:+26270521 Msa0496070:CDS
ATGCTTGGTATAAACTAGCG+TGG 0.616509 3_4:+26275870 Msa0496070:three_prime_UTR
ATTGACTCATCAAGATGCAG+TGG 0.618454 3_4:-26272306 None:intergenic
TGATGTTCCAGGATAAGCAA+GGG 0.620122 3_4:+26273102 Msa0496070:intron
AGGAACCTGATAAGCAGAAG+TGG 0.620614 3_4:-26268958 None:intergenic
CTCCGAAGATGAAGTCAGAA+GGG 0.621176 3_4:-26268932 None:intergenic
AGGGATGGAGCTGATGTGAG+AGG 0.625962 3_4:+26275588 Msa0496070:intron
CATACCTTCAGTATAAGCAT+AGG 0.630354 3_4:-26270431 None:intergenic
TTGATGTTCCAGGATAAGCA+AGG 0.633558 3_4:+26273101 Msa0496070:intron
ATGTGAGAGGACACTTTGCA+TGG 0.634153 3_4:+26275601 Msa0496070:CDS
TTGATGAGTCAATGGGAGGA+TGG 0.652779 3_4:+26272316 Msa0496070:CDS
TAGCCTGCACAAGTGATGCA+AGG 0.652910 3_4:-26274838 None:intergenic
CGAAGAATGTCATTACGACA+AGG 0.654678 3_4:+26273697 Msa0496070:CDS
GATAGAAGGTGCTAGCAAGG+AGG 0.656517 3_4:+26270381 Msa0496070:intron
GATGTTCCAGGATAAGCAAG+GGG 0.676059 3_4:+26273103 Msa0496070:intron
GAAGGTGCTAGCAAGGAGGG+TGG 0.683982 3_4:+26270385 Msa0496070:CDS
AGCATCATACCCACCAACTG+CGG 0.685967 3_4:-26272772 None:intergenic
CATCTTGATGAGTCAATGGG+AGG 0.710481 3_4:+26272312 Msa0496070:CDS
GATGCAGTGGAAGATCCCAA+TGG 0.714924 3_4:-26272293 None:intergenic
CCGACTTCCCAAATTCTCGG+AGG 0.756560 3_4:+26273586 Msa0496070:CDS
ATGTTCCAGGATAAGCAAGG+GGG 0.760256 3_4:+26273104 Msa0496070:intron
GCCTAAATCACTATACAACG+AGG 0.773876 3_4:+26273648 Msa0496070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACATATATATATTTTTTTG+GGG + chr3_4:26269585-26269604 Msa0496070:intron 10.0%
!!! AAATACATATCTTTTTTATA+TGG + chr3_4:26271056-26271075 Msa0496070:intron 10.0%
!!! AAATTTTAAAGAAAAAGAAA+AGG + chr3_4:26271306-26271325 Msa0496070:intron 10.0%
!! TAACAAATTAAATATATACT+TGG - chr3_4:26272546-26272565 None:intergenic 10.0%
!!! GTATATATTTAATTTGTTAT+TGG + chr3_4:26272547-26272566 Msa0496070:intron 10.0%
!! ATATTTATCAAAAAATTTAG+AGG - chr3_4:26272579-26272598 None:intergenic 10.0%
!! AAGAGAATAAAAAAAAATTA+AGG + chr3_4:26275414-26275433 Msa0496070:intron 10.0%
!! AGAGAATAAAAAAAAATTAA+GGG + chr3_4:26275415-26275434 Msa0496070:intron 10.0%
!!! ACATATATATATTTTTTTGG+GGG + chr3_4:26269586-26269605 Msa0496070:intron 15.0%
!!! CATTTTATGTAAACTTTTTT+TGG + chr3_4:26270090-26270109 Msa0496070:intron 15.0%
!!! CGAAAAAATGTTATATTTTA+TGG - chr3_4:26271337-26271356 None:intergenic 15.0%
!! TATGTAAAACCTAAAAATAA+TGG - chr3_4:26271980-26271999 None:intergenic 15.0%
!!! TATTATATTGCAATGTTTTA+TGG + chr3_4:26272086-26272105 Msa0496070:intron 15.0%
!!! ATTATATTGCAATGTTTTAT+GGG + chr3_4:26272087-26272106 Msa0496070:intron 15.0%
!! TAGAAGAGATAAAAATATTA+AGG - chr3_4:26272218-26272237 None:intergenic 15.0%
!! TGGGAAATAATAAATATATA+TGG - chr3_4:26272245-26272264 None:intergenic 15.0%
!! TATAAAACAAATGTATGTAT+AGG - chr3_4:26273238-26273257 None:intergenic 15.0%
!!! AAAATTTCTTTTGAATTCTT+TGG + chr3_4:26273616-26273635 Msa0496070:CDS 15.0%
!! TATATTAATAAACGATAGAA+GGG - chr3_4:26274366-26274385 None:intergenic 15.0%
!! TAATATAAAAACGAAGTATA+TGG + chr3_4:26275188-26275207 Msa0496070:intron 15.0%
!!! TATAAAAAATGGAGTTTTAA+AGG - chr3_4:26275942-26275961 None:intergenic 15.0%
!! ATTTCTATACTATAGATGTT+GGG - chr3_4:26269219-26269238 None:intergenic 20.0%
!! TTTATAATATATGTAAGAGC+CGG - chr3_4:26269628-26269647 None:intergenic 20.0%
!!! TTTTGTTATAGTTGTTTTTG+TGG + chr3_4:26270046-26270065 Msa0496070:intron 20.0%
!! GTTTCAGAGAAAAATTAAAT+CGG - chr3_4:26270337-26270356 None:intergenic 20.0%
!! AATTTGCATACACAATATTT+AGG - chr3_4:26270602-26270621 None:intergenic 20.0%
!!! TAATTAATTTGGTAAAGGTT+TGG - chr3_4:26271781-26271800 None:intergenic 20.0%
!!! TAAGTAGTGGATAATTAATT+TGG - chr3_4:26271792-26271811 None:intergenic 20.0%
!!! ACCTAAAAATAATGGTTTTA+GGG - chr3_4:26271972-26271991 None:intergenic 20.0%
!!! AACCTAAAAATAATGGTTTT+AGG - chr3_4:26271973-26271992 None:intergenic 20.0%
!!! CTTACATTAATATGTTGATT+TGG + chr3_4:26272020-26272039 Msa0496070:intron 20.0%
!! ATATATTTATTATTTCCCAC+AGG + chr3_4:26272246-26272265 Msa0496070:intron 20.0%
!! GTTGAATAAAAATATCATGT+AGG + chr3_4:26272338-26272357 Msa0496070:intron 20.0%
!! GTTGAATAAAAAAATCATGT+AGG + chr3_4:26272471-26272490 Msa0496070:intron 20.0%
!! TATCAAAAAATTTAGAGGTA+AGG - chr3_4:26272574-26272593 None:intergenic 20.0%
!!! TTGTCTGTTATATTTTTTTG+CGG + chr3_4:26272955-26272974 Msa0496070:intron 20.0%
!! ATATTAATAAACGATAGAAG+GGG - chr3_4:26274365-26274384 None:intergenic 20.0%
!! GTATATTAATAAACGATAGA+AGG - chr3_4:26274367-26274386 None:intergenic 20.0%
!! TCATGAACTATAAAAAAGAA+CGG + chr3_4:26274474-26274493 Msa0496070:intron 20.0%
!!! ATAAACAGATTTTATATGAC+TGG + chr3_4:26274677-26274696 Msa0496070:intron 20.0%
!! CGATAATTTGAAAAATAAAC+TGG - chr3_4:26274915-26274934 None:intergenic 20.0%
!!! TTCAATGTTTTTAAGCAAAT+AGG - chr3_4:26275315-26275334 None:intergenic 20.0%
!! CAAATGATTTACAAAACTTT+AGG - chr3_4:26275561-26275580 None:intergenic 20.0%
!!! CATTATTTTCTTGTAGTATT+TGG - chr3_4:26275821-26275840 None:intergenic 20.0%
!!! CAAATAATGACATAAGTTTT+TGG - chr3_4:26275849-26275868 None:intergenic 20.0%
!! CAAAAACTTATGTCATTATT+TGG + chr3_4:26275847-26275866 Msa0496070:three_prime_UTR 20.0%
!! GCTAAGACAAATATAAAAAA+TGG - chr3_4:26275953-26275972 None:intergenic 20.0%
!!! CATTTGTCTTTTTGATGATT+TGG + chr3_4:26268998-26269017 Msa0496070:intron 25.0%
! CATTTCTATACTATAGATGT+TGG - chr3_4:26269220-26269239 None:intergenic 25.0%
!! ATATAAGCACATTTTATTCG+AGG + chr3_4:26269531-26269550 Msa0496070:intron 25.0%
! TTATAATATATGTAAGAGCC+GGG - chr3_4:26269627-26269646 None:intergenic 25.0%
! GAATATAGGAATATCTCAAT+TGG - chr3_4:26269748-26269767 None:intergenic 25.0%
! TATCTTGATCTTGAAATTGA+AGG + chr3_4:26269944-26269963 Msa0496070:intron 25.0%
!!! CTTTTTTTGGTATTTTGTTC+TGG + chr3_4:26270103-26270122 Msa0496070:intron 25.0%
!!! TGCTTATTTCTATAGATAGA+AGG + chr3_4:26270367-26270386 Msa0496070:intron 25.0%
! TGATCATTATCATCGTTATA+AGG + chr3_4:26270556-26270575 Msa0496070:CDS 25.0%
! ATCACTAATAAAACATACCA+GGG - chr3_4:26271029-26271048 None:intergenic 25.0%
! TGTTTACAACAGATGATTAA+AGG + chr3_4:26271200-26271219 Msa0496070:intron 25.0%
! TCTTTACTTTACCATCTTAT+CGG - chr3_4:26271268-26271287 None:intergenic 25.0%
!!! AGTGCAATTTTTTTATACAG+TGG + chr3_4:26271378-26271397 Msa0496070:intron 25.0%
!!! GTGCAATTTTTTTATACAGT+GGG + chr3_4:26271379-26271398 Msa0496070:intron 25.0%
!!! TGCAATTTTTTTATACAGTG+GGG + chr3_4:26271380-26271399 Msa0496070:intron 25.0%
!! ATTAGTCAACAACTTGTTTA+AGG - chr3_4:26271586-26271605 None:intergenic 25.0%
!! AACAAGTTGTTGACTAATAT+AGG + chr3_4:26271588-26271607 Msa0496070:intron 25.0%
!! GTGGATAATTAATTTGGTAA+AGG - chr3_4:26271786-26271805 None:intergenic 25.0%
!!! TCCCTAAAACCATTATTTTT+AGG + chr3_4:26271968-26271987 Msa0496070:intron 25.0%
! TAAAAATATTAAGGCAAAGC+AGG - chr3_4:26272209-26272228 None:intergenic 25.0%
!! TTTTGTAACTTTGTACCATT+GGG + chr3_4:26272278-26272297 Msa0496070:CDS 25.0%
! AAGTATTAAAGGTTATGATG+TGG + chr3_4:26272449-26272468 Msa0496070:intron 25.0%
! TGCATTCAGTAATAGAATAT+TGG - chr3_4:26272639-26272658 None:intergenic 25.0%
! TTGAAAATATATTCTTCGAC+AGG - chr3_4:26272984-26273003 None:intergenic 25.0%
! CGAAGTTATGATATTAATGA+GGG - chr3_4:26273026-26273045 None:intergenic 25.0%
! TATATCAAGTGGAAAATCTA+TGG - chr3_4:26273282-26273301 None:intergenic 25.0%
! ATTAAACTCAAAACAGCAAA+AGG + chr3_4:26273400-26273419 Msa0496070:intron 25.0%
! GATAGAATATATTCTTAACC+AGG + chr3_4:26273504-26273523 Msa0496070:intron 25.0%
! AGAATATAAACTTGCATCTT+TGG - chr3_4:26273930-26273949 None:intergenic 25.0%
! ATATTCTATGTGCATATAAC+AGG + chr3_4:26273943-26273962 Msa0496070:intron 25.0%
!!! TCCACTTTTAGAAAACAAAT+AGG + chr3_4:26274090-26274109 Msa0496070:intron 25.0%
!!! CCACTTTTAGAAAACAAATA+GGG + chr3_4:26274091-26274110 Msa0496070:intron 25.0%
! CAATGAGAACAAAACATAAA+AGG - chr3_4:26274223-26274242 None:intergenic 25.0%
!!! CTTTTATGTTTTGTTCTCAT+TGG + chr3_4:26274221-26274240 Msa0496070:intron 25.0%
!!! TTTTGGCTTTACATAAATAC+TGG - chr3_4:26274249-26274268 None:intergenic 25.0%
!! AGGAAAAAAGTGATACATTT+TGG - chr3_4:26274266-26274285 None:intergenic 25.0%
!! GTAAGAAAAGTGATACATTT+TGG - chr3_4:26274335-26274354 None:intergenic 25.0%
! CAATACATAACAGGATAAAT+TGG - chr3_4:26274391-26274410 None:intergenic 25.0%
! AGTTAGAAACAATACATAAC+AGG - chr3_4:26274400-26274419 None:intergenic 25.0%
!! AGAACCATTTTATAAAGTTC+TGG - chr3_4:26274704-26274723 None:intergenic 25.0%
! AAATGGTTCTCGTATTTATA+AGG + chr3_4:26274714-26274733 Msa0496070:intron 25.0%
! TATGAATAGAGAGAATTGAA+TGG + chr3_4:26274940-26274959 Msa0496070:intron 25.0%
!! AAACATTGAAAGTTTAGAAC+AGG + chr3_4:26275325-26275344 Msa0496070:intron 25.0%
!! AACATTGAAAGTTTAGAACA+GGG + chr3_4:26275326-26275345 Msa0496070:intron 25.0%
!! AAGGCTTTTATGATTTTCAA+TGG - chr3_4:26275371-26275390 None:intergenic 25.0%
! AAATCATGTATAGATCAGAA+AGG - chr3_4:26275390-26275409 None:intergenic 25.0%
! GTCTATGTAGATTACAAAAA+TGG + chr3_4:26275678-26275697 Msa0496070:CDS 25.0%
! GGCATATGAAATATAAGATT+TGG - chr3_4:26275921-26275940 None:intergenic 25.0%
! GAAGAATTTCTGAGAGAAAA+TGG + chr3_4:26268867-26268886 Msa0496070:CDS 30.0%
!!! GAAAATGGTTTTGAGAAAGA+AGG + chr3_4:26268882-26268901 Msa0496070:CDS 30.0%
ATGTGATAGTTTAAGCACAA+AGG - chr3_4:26268981-26269000 None:intergenic 30.0%
TATGAGTCATCTTACTTACA+AGG - chr3_4:26269096-26269115 None:intergenic 30.0%
TTCAAAGCTTACAAACTCTA+AGG + chr3_4:26269380-26269399 Msa0496070:intron 30.0%
!!! ATATATTTTTTTGGGGGTGT+CGG + chr3_4:26269592-26269611 Msa0496070:intron 30.0%
TATAATATATGTAAGAGCCG+GGG - chr3_4:26269626-26269645 None:intergenic 30.0%
TGGAGTAAATGCATGAATAT+AGG - chr3_4:26269762-26269781 None:intergenic 30.0%
TATTCATGCATTTACTCCAT+TGG + chr3_4:26269763-26269782 Msa0496070:intron 30.0%
ATGAATATAACAGTCACCAA+TGG - chr3_4:26269782-26269801 None:intergenic 30.0%
! AAATTTCAAGCTCGCTATTT+TGG - chr3_4:26269862-26269881 None:intergenic 30.0%
TCTTAATTCTAACCTATCCA+CGG + chr3_4:26270173-26270192 Msa0496070:intron 30.0%
TTATTCTGTTGTTGATCCTA+TGG + chr3_4:26270260-26270279 Msa0496070:intron 30.0%
TGAGCAATAGTTAAAACCAT+AGG - chr3_4:26270279-26270298 None:intergenic 30.0%
ACTATTGCTCAAATGAGTAA+TGG + chr3_4:26270288-26270307 Msa0496070:intron 30.0%
!! AAATGAGTAATGGTATTGGT+AGG + chr3_4:26270298-26270317 Msa0496070:intron 30.0%
ATCACAATTTGAGCAAATTG+AGG - chr3_4:26270467-26270486 None:intergenic 30.0%
!!! TTACTATCTGCTTGTTGTTT+TGG + chr3_4:26270493-26270512 Msa0496070:intron 30.0%
AAAATACTCGACAAAAGCAA+TGG + chr3_4:26270521-26270540 Msa0496070:CDS 30.0%
!! GCATTTAAATGTTGCTTTAC+AGG + chr3_4:26270766-26270785 Msa0496070:intron 30.0%
CTTAATGTAACTATGTGAAC+AGG + chr3_4:26270933-26270952 Msa0496070:intron 30.0%
TATTGATCTTATAGCCAAGT+TGG + chr3_4:26270960-26270979 Msa0496070:CDS 30.0%
ATTGATCTTATAGCCAAGTT+GGG + chr3_4:26270961-26270980 Msa0496070:CDS 30.0%
! CGTACAGATTTTCAATTTCT+TGG + chr3_4:26270992-26271011 Msa0496070:CDS 30.0%
CATCACTAATAAAACATACC+AGG - chr3_4:26271030-26271049 None:intergenic 30.0%
! TGGTTAATATTTGCCTCTTT+TGG + chr3_4:26271165-26271184 Msa0496070:intron 30.0%
! GCGTAAATTAAGTCTTTTCT+GGG + chr3_4:26271222-26271241 Msa0496070:intron 30.0%
! TAAATTAAGTCTTTTCTGGG+AGG + chr3_4:26271225-26271244 Msa0496070:intron 30.0%
!! AAATTAAGTCTTTTCTGGGA+GGG + chr3_4:26271226-26271245 Msa0496070:intron 30.0%
GATGGTAAAGTAAAGAAGAT+AGG + chr3_4:26271272-26271291 Msa0496070:intron 30.0%
TAAAGTAAAGAAGATAGGAG+AGG + chr3_4:26271277-26271296 Msa0496070:intron 30.0%
!!! AATTTTTTTATACAGTGGGG+AGG + chr3_4:26271383-26271402 Msa0496070:intron 30.0%
AGCGAAATAAAAAGAAAGCA+CGG + chr3_4:26271451-26271470 Msa0496070:intron 30.0%
ACATTACATATCCTTTCCTA+TGG - chr3_4:26271492-26271511 None:intergenic 30.0%
! TTGTTGACTAATATAGGAGA+TGG + chr3_4:26271594-26271613 Msa0496070:intron 30.0%
TATTTCTTGTGCAGAGTTTA+CGG - chr3_4:26271651-26271670 None:intergenic 30.0%
TAAACTCTGCACAAGAAATA+TGG + chr3_4:26271651-26271670 Msa0496070:intron 30.0%
! CAAGATTGCTAAATGTTTTG+AGG + chr3_4:26271924-26271943 Msa0496070:intron 30.0%
!!! AAATAATGGTTTTAGGGACA+AGG - chr3_4:26271966-26271985 None:intergenic 30.0%
ATCAATGCTCTTCTTGAAAA+AGG + chr3_4:26272168-26272187 Msa0496070:CDS 30.0%
CAATGGTACAAAGTTACAAA+AGG - chr3_4:26272279-26272298 None:intergenic 30.0%
! CTTTTGTAACTTTGTACCAT+TGG + chr3_4:26272277-26272296 Msa0496070:CDS 30.0%
!! GATGTGCTTGAAAGTATTAA+AGG + chr3_4:26272438-26272457 Msa0496070:intron 30.0%
GCGAAGTTATGATATTAATG+AGG - chr3_4:26273027-26273046 None:intergenic 30.0%
TCTTCAATCTTATCAGAGTT+TGG - chr3_4:26273167-26273186 None:intergenic 30.0%
CTTCATGCATTTATATCAAG+TGG - chr3_4:26273293-26273312 None:intergenic 30.0%
TATAAATGCATGAAGATGTG+TGG + chr3_4:26273298-26273317 Msa0496070:intron 30.0%
! TACATTTTTGCGTTTAACGT+TGG + chr3_4:26273344-26273363 Msa0496070:intron 30.0%
TTCTTGCATCCACTATATTA+TGG + chr3_4:26273527-26273546 Msa0496070:CDS 30.0%
TTGAATTCTTTGGACTTCAT+TGG + chr3_4:26273626-26273645 Msa0496070:CDS 30.0%
!! TTTTCTAAAAGTGGACAAGA+AGG - chr3_4:26274085-26274104 None:intergenic 30.0%
!! CCCTATTTGTTTTCTAAAAG+TGG - chr3_4:26274094-26274113 None:intergenic 30.0%
TTTGAATCTTCTGTAGTGTT+TGG + chr3_4:26274171-26274190 Msa0496070:intron 30.0%
TGAGAACAAAACATAAAAGG+CGG - chr3_4:26274220-26274239 None:intergenic 30.0%
GAAAATAGAACAGAACATGT+AGG - chr3_4:26274286-26274305 None:intergenic 30.0%
!!! CATTTTGGTTCTACACAAAT+GGG - chr3_4:26274320-26274339 None:intergenic 30.0%
!!! ACATTTTGGTTCTACACAAA+TGG - chr3_4:26274321-26274340 None:intergenic 30.0%
! TAACTTGTCTCTCAAATGAA+TGG + chr3_4:26274415-26274434 Msa0496070:intron 30.0%
AGAACGGAAATATGTGTAAA+TGG + chr3_4:26274490-26274509 Msa0496070:intron 30.0%
TTATGTTATATGGCTCAACA+AGG + chr3_4:26274524-26274543 Msa0496070:intron 30.0%
AATCCTGATTAGATAGCATA+AGG + chr3_4:26274607-26274626 Msa0496070:intron 30.0%
GTTGAAGATATGTCAACAAT+AGG + chr3_4:26274629-26274648 Msa0496070:intron 30.0%
TGGACCAGAACTTTATAAAA+TGG + chr3_4:26274697-26274716 Msa0496070:intron 30.0%
TAATCTTTGCTTAGCTGATA+TGG + chr3_4:26275153-26275172 Msa0496070:intron 30.0%
TGACAGACATATGCATAATA+AGG - chr3_4:26275232-26275251 None:intergenic 30.0%
! GAAGTTCAAACGATTTTACT+CGG - chr3_4:26275508-26275527 None:intergenic 30.0%
TGTAAATCATTTGAATGCAC+AGG + chr3_4:26275568-26275587 Msa0496070:intron 30.0%
GTAAATCATTTGAATGCACA+GGG + chr3_4:26275569-26275588 Msa0496070:intron 30.0%
ATTACTTGACAACTTCGAAT+GGG + chr3_4:26275626-26275645 Msa0496070:CDS 30.0%
! ATTACAAAAATGGACTCACT+AGG + chr3_4:26275688-26275707 Msa0496070:CDS 30.0%
GTATTTGGTAAGACACATAA+TGG - chr3_4:26275806-26275825 None:intergenic 30.0%
TATGTCATTATTTGGATGCT+TGG + chr3_4:26275855-26275874 Msa0496070:three_prime_UTR 30.0%
ACATTGAAGGAGTTTCAGAA+TGG + chr3_4:26268836-26268855 Msa0496070:exon 35.0%
! TTGGTGCTTGTAATGCTATT+TGG + chr3_4:26269017-26269036 Msa0496070:intron 35.0%
ACTCAAAACCTTGAGGTAAT+GGG - chr3_4:26269121-26269140 None:intergenic 35.0%
TACTCAAAACCTTGAGGTAA+TGG - chr3_4:26269122-26269141 None:intergenic 35.0%
ACTAAACAGACTTATGCAAG+CGG - chr3_4:26269361-26269380 None:intergenic 35.0%
!! ACTCTAAGGCTGAGTTTAAT+CGG + chr3_4:26269394-26269413 Msa0496070:intron 35.0%
ATCAGATGTTCAATACAACG+AGG - chr3_4:26269498-26269517 None:intergenic 35.0%
AAAAATTCTCAGTGTCTCTC+TGG + chr3_4:26269659-26269678 Msa0496070:intron 35.0%
GAGCTTGAAATTTGAACTGT+CGG + chr3_4:26269869-26269888 Msa0496070:intron 35.0%
AGCTTGAAATTTGAACTGTC+GGG + chr3_4:26269870-26269889 Msa0496070:intron 35.0%
AAATTAGGAACAGAAAACCG+TGG - chr3_4:26270193-26270212 None:intergenic 35.0%
GCTCAAATGAGTAATGGTAT+TGG + chr3_4:26270294-26270313 Msa0496070:intron 35.0%
CATACCTTCAGTATAAGCAT+AGG - chr3_4:26270434-26270453 None:intergenic 35.0%
CAACAAGCAGATAGTAAGTA+TGG - chr3_4:26270490-26270509 None:intergenic 35.0%
!!! TATCTGCTTGTTGTTTTGGT+AGG + chr3_4:26270497-26270516 Msa0496070:intron 35.0%
! AGTCAGCTACATGGATTAAA+CGG - chr3_4:26270670-26270689 None:intergenic 35.0%
GTCTGTACATAATGTCTTTC+TGG + chr3_4:26270715-26270734 Msa0496070:intron 35.0%
!! ATGTCTTTCTGGATCGATTT+TGG + chr3_4:26270726-26270745 Msa0496070:intron 35.0%
TTCGTGCTCAAAAATAGACT+CGG - chr3_4:26270811-26270830 None:intergenic 35.0%
CTGATAAACTTCTAGGCTTA+AGG - chr3_4:26271119-26271138 None:intergenic 35.0%
!! CATTGACCAAGTATTGATGA+CGG - chr3_4:26271147-26271166 None:intergenic 35.0%
ATGTCTTTATGAGCCAAAAG+AGG - chr3_4:26271181-26271200 None:intergenic 35.0%
! GGCGTAAATTAAGTCTTTTC+TGG + chr3_4:26271221-26271240 Msa0496070:intron 35.0%
! ACTTTACCATCTTATCGGTT+GGG - chr3_4:26271263-26271282 None:intergenic 35.0%
TACTTTACCATCTTATCGGT+TGG - chr3_4:26271264-26271283 None:intergenic 35.0%
AAAAATGTGACACACACTAC+TGG + chr3_4:26271545-26271564 Msa0496070:intron 35.0%
GAGCTTAATTTCGTAGTTCA+TGG - chr3_4:26271686-26271705 None:intergenic 35.0%
ACTAACAGACTTAAACCATC+CGG + chr3_4:26271734-26271753 Msa0496070:intron 35.0%
TATGTGAACGATGTAAGTAG+TGG - chr3_4:26271805-26271824 None:intergenic 35.0%
! TGTAGCAGGTTAGTTAGAAT+GGG - chr3_4:26271830-26271849 None:intergenic 35.0%
! ATGTAGCAGGTTAGTTAGAA+TGG - chr3_4:26271831-26271850 None:intergenic 35.0%
ATTCTAACTAACCTGCTACA+TGG + chr3_4:26271830-26271849 Msa0496070:intron 35.0%
! CAATGTTTTATGGGTGTAGA+TGG + chr3_4:26272096-26272115 Msa0496070:intron 35.0%
TATGCCTTCATCATTGACAT+TGG - chr3_4:26272130-26272149 None:intergenic 35.0%
ACAAAAGGTTGAATACCTGT+GGG - chr3_4:26272264-26272283 None:intergenic 35.0%
TACAAAAGGTTGAATACCTG+TGG - chr3_4:26272265-26272284 None:intergenic 35.0%
AGGTATCATCTAACTGAGTA+TGG + chr3_4:26272491-26272510 Msa0496070:intron 35.0%
! GATACTTGCTTTGCAAGTTT+TGG + chr3_4:26272705-26272724 Msa0496070:CDS 35.0%
TTGGCGATAAAGTGAAAAAC+TGG + chr3_4:26272724-26272743 Msa0496070:CDS 35.0%
!!! GATCTATTTTGACTTCTTCC+AGG - chr3_4:26272810-26272829 None:intergenic 35.0%
AATGAGGGTAGTTGCTATAT+AGG - chr3_4:26273011-26273030 None:intergenic 35.0%
!!! GCGTGCACAGTTTTATTATA+AGG + chr3_4:26273045-26273064 Msa0496070:intron 35.0%
TAAGGTTTGCACAATAGTTG+AGG + chr3_4:26273063-26273082 Msa0496070:intron 35.0%
CTTTATTCTCTTGATGTTCC+AGG + chr3_4:26273091-26273110 Msa0496070:intron 35.0%
TCGTGAACACTAGAAATTGA+AGG + chr3_4:26273443-26273462 Msa0496070:intron 35.0%
ACACTAGAAATTGAAGGTTG+AGG + chr3_4:26273449-26273468 Msa0496070:intron 35.0%
AGGTTGAGGATATTTAACCT+TGG + chr3_4:26273463-26273482 Msa0496070:intron 35.0%
GGATAGTCTCCATAATATAG+TGG - chr3_4:26273539-26273558 None:intergenic 35.0%
ACCTCGTTGTATAGTGATTT+AGG - chr3_4:26273652-26273671 None:intergenic 35.0%
CTTGTCGTAATGACATTCTT+CGG - chr3_4:26273699-26273718 None:intergenic 35.0%
!!! AGCTGTTTTTCACAGTTGAA+TGG + chr3_4:26273808-26273827 Msa0496070:intron 35.0%
!!! GCTGTTTTTCACAGTTGAAT+GGG + chr3_4:26273809-26273828 Msa0496070:intron 35.0%
! TTTTTCACAGTTGAATGGGA+AGG + chr3_4:26273813-26273832 Msa0496070:intron 35.0%
AGAAAGTCACATACCATTCT+CGG - chr3_4:26274059-26274078 None:intergenic 35.0%
AACCACTCGATAGAAAATTG+AGG + chr3_4:26274118-26274137 Msa0496070:intron 35.0%
ACCACTCGATAGAAAATTGA+GGG + chr3_4:26274119-26274138 Msa0496070:intron 35.0%
CGAGTGTGAGTTATGTTATA+TGG + chr3_4:26274514-26274533 Msa0496070:intron 35.0%
CAACCTTATGCTATCTAATC+AGG - chr3_4:26274613-26274632 None:intergenic 35.0%
GTCTTTCCATTTAACAGGTA+TGG + chr3_4:26274739-26274758 Msa0496070:intron 35.0%
CATCATCCATACCTGTTAAA+TGG - chr3_4:26274748-26274767 None:intergenic 35.0%
TCATCTAGCATCTCATTTAG+TGG - chr3_4:26274788-26274807 None:intergenic 35.0%
GCTTATCATGTGTAACAAAC+AGG + chr3_4:26275033-26275052 Msa0496070:intron 35.0%
CATTACTTGACAACTTCGAA+TGG + chr3_4:26275625-26275644 Msa0496070:CDS 35.0%
ACCAATATGCAGAAGACTTT+GGG - chr3_4:26275716-26275735 None:intergenic 35.0%
AACCAATATGCAGAAGACTT+TGG - chr3_4:26275717-26275736 None:intergenic 35.0%
! TTTTCGCGGTTTCTTAAAGA+TGG + chr3_4:26275735-26275754 Msa0496070:CDS 35.0%
TTTCGCGGTTTCTTAAAGAT+GGG + chr3_4:26275736-26275755 Msa0496070:CDS 35.0%
AGAGTAGCTGTGAACATTGA+AGG + chr3_4:26268823-26268842 Msa0496070:five_prime_UTR 40.0%
TTCCCTTCTGACTTCATCTT+CGG + chr3_4:26268930-26268949 Msa0496070:CDS 40.0%
TCTATTGTTGTGTGCAAGTG+TGG + chr3_4:26269042-26269061 Msa0496070:intron 40.0%
CTATTGTTGTGTGCAAGTGT+GGG + chr3_4:26269043-26269062 Msa0496070:intron 40.0%
GGGATCGGATAGAAAAGTAA+AGG + chr3_4:26269063-26269082 Msa0496070:intron 40.0%
CTCATAAACCCATTACCTCA+AGG + chr3_4:26269110-26269129 Msa0496070:intron 40.0%
CACTCTTACTCAAAACCTTG+AGG - chr3_4:26269128-26269147 None:intergenic 40.0%
!!! CAAGGTTTTGAGTAAGAGTG+TGG + chr3_4:26269128-26269147 Msa0496070:intron 40.0%
TATAGATGTTGGGTCACTGA+GGG - chr3_4:26269209-26269228 None:intergenic 40.0%
AGCTAATAATATGGCAACCC+CGG - chr3_4:26269451-26269470 None:intergenic 40.0%
!! GGTGGGACTAGCTAATAATA+TGG - chr3_4:26269460-26269479 None:intergenic 40.0%
! ACAACGAGGTACCATAGAAT+AGG - chr3_4:26269484-26269503 None:intergenic 40.0%
! GAAATTGAGAGTGATGGTGA+TGG + chr3_4:26269690-26269709 Msa0496070:intron 40.0%
!! AGAGTGATGGTGATGGTTTA+GGG + chr3_4:26269697-26269716 Msa0496070:intron 40.0%
TAGGGGTGAAACTGAGATAA+TGG + chr3_4:26269715-26269734 Msa0496070:intron 40.0%
AATCTCTAGATTCGTGCACT+CGG - chr3_4:26269921-26269940 None:intergenic 40.0%
!! GGTATTGGTAGGCGATTATA+TGG + chr3_4:26270309-26270328 Msa0496070:intron 40.0%
!! ATAGATAGAAGGTGCTAGCA+AGG + chr3_4:26270378-26270397 Msa0496070:intron 40.0%
TGGTAGAGGTCCTAGTATAT+GGG + chr3_4:26270405-26270424 Msa0496070:CDS 40.0%
GATGCCTATGCTTATACTGA+AGG + chr3_4:26270427-26270446 Msa0496070:CDS 40.0%
!! AATGTTGCTTTACAGGAGAC+TGG + chr3_4:26270773-26270792 Msa0496070:intron 40.0%
TCGTGCTCAAAAATAGACTC+GGG - chr3_4:26270810-26270829 None:intergenic 40.0%
CGTCATCAATACTTGGTCAA+TGG + chr3_4:26271145-26271164 Msa0496070:intron 40.0%
AAATTGCACTCTCTCCTATC+TGG - chr3_4:26271368-26271387 None:intergenic 40.0%
! AAAGAAAGCACGGAATACAC+AGG + chr3_4:26271461-26271480 Msa0496070:intron 40.0%
GAATACACAGGCTTTACCAT+AGG + chr3_4:26271473-26271492 Msa0496070:intron 40.0%
TAACAAACTAGCCATGTAGC+AGG - chr3_4:26271844-26271863 None:intergenic 40.0%
! ACTCTGTAGTGTGAGAGTAT+GGG - chr3_4:26271877-26271896 None:intergenic 40.0%
AACTCTGTAGTGTGAGAGTA+TGG - chr3_4:26271878-26271897 None:intergenic 40.0%
TTTATGGGTGTAGATGGCTT+AGG + chr3_4:26272102-26272121 Msa0496070:intron 40.0%
GGAACCAATGTCAATGATGA+AGG + chr3_4:26272123-26272142 Msa0496070:CDS 40.0%
! ATTGACTCATCAAGATGCAG+TGG - chr3_4:26272309-26272328 None:intergenic 40.0%
ACTGCATCTTGATGAGTCAA+TGG + chr3_4:26272308-26272327 Msa0496070:CDS 40.0%
CTGCATCTTGATGAGTCAAT+GGG + chr3_4:26272309-26272328 Msa0496070:CDS 40.0%
TTGGCATCAGATACTTCGTA+AGG - chr3_4:26272527-26272546 None:intergenic 40.0%
CTGAATGCAGTGTACATATG+TGG + chr3_4:26272650-26272669 Msa0496070:intron 40.0%
! TGATGATGTGCTGCTAAGTA+TGG - chr3_4:26272840-26272859 None:intergenic 40.0%
AGCAGCACATCATCAAATCT+TGG + chr3_4:26272845-26272864 Msa0496070:CDS 40.0%
CTTGTACTTGCTTCGGTAAA+TGG - chr3_4:26272889-26272908 None:intergenic 40.0%
CATTTACCGAAGCAAGTACA+AGG + chr3_4:26272887-26272906 Msa0496070:CDS 40.0%
GTTTGACCTTGTACTTGCTT+CGG - chr3_4:26272896-26272915 None:intergenic 40.0%
TTGATGTTCCAGGATAAGCA+AGG + chr3_4:26273101-26273120 Msa0496070:intron 40.0%
TGATGTTCCAGGATAAGCAA+GGG + chr3_4:26273102-26273121 Msa0496070:intron 40.0%
! AGACACCTAGATTTTCGTCT+TGG + chr3_4:26273203-26273222 Msa0496070:CDS 40.0%
GTGTGGACACAAACTTACAA+AGG + chr3_4:26273315-26273334 Msa0496070:intron 40.0%
CTCAAAACAGCAAAAGGTCT+TGG + chr3_4:26273406-26273425 Msa0496070:intron 40.0%
TAAGCATGCATCTTACACCA+AGG - chr3_4:26273483-26273502 None:intergenic 40.0%
!! ATATAGTGGATGCAAGAACC+TGG - chr3_4:26273525-26273544 None:intergenic 40.0%
TTATCCTCCTCCGAGAATTT+GGG - chr3_4:26273596-26273615 None:intergenic 40.0%
TTTATCCTCCTCCGAGAATT+TGG - chr3_4:26273597-26273616 None:intergenic 40.0%
GCCTAAATCACTATACAACG+AGG + chr3_4:26273648-26273667 Msa0496070:CDS 40.0%
CGAAGAATGTCATTACGACA+AGG + chr3_4:26273697-26273716 Msa0496070:CDS 40.0%
TACCATCTATGTCTCTCTGT+CGG + chr3_4:26273863-26273882 Msa0496070:intron 40.0%
AGTGGCTATATGTTGTTCCT+TGG + chr3_4:26273975-26273994 Msa0496070:intron 40.0%
GTGGCTATATGTTGTTCCTT+GGG + chr3_4:26273976-26273995 Msa0496070:intron 40.0%
TGGCTATATGTTGTTCCTTG+GGG + chr3_4:26273977-26273996 Msa0496070:intron 40.0%
CCATTCTCGGTGACATATAT+CGG - chr3_4:26274046-26274065 None:intergenic 40.0%
! TCCCTCAATTTTCTATCGAG+TGG - chr3_4:26274123-26274142 None:intergenic 40.0%
!! TTGGTTCTACACAAATGGGT+TGG - chr3_4:26274316-26274335 None:intergenic 40.0%
AAACGATAGAAGGGGACAAA+AGG - chr3_4:26274357-26274376 None:intergenic 40.0%
!! TATTTTGAGAGCTGCAACCT+AGG + chr3_4:26274565-26274584 Msa0496070:intron 40.0%
TATGTCAACAATAGGATCCG+CGG + chr3_4:26274637-26274656 Msa0496070:intron 40.0%
CATCTATTAAATCAGAGCCG+CGG - chr3_4:26274657-26274676 None:intergenic 40.0%
AGGCTGTCTTTCCATTTAAC+AGG + chr3_4:26274734-26274753 Msa0496070:intron 40.0%
AGGTGTGTGTGAGAAGAAAA+TGG - chr3_4:26274877-26274896 None:intergenic 40.0%
! ACTGGTTTAACTCGTAGATG+AGG - chr3_4:26274897-26274916 None:intergenic 40.0%
ACTCGGTCAGTTGTTATGTT+AGG - chr3_4:26275491-26275510 None:intergenic 40.0%
ATCATTTGAATGCACAGGGA+TGG + chr3_4:26275573-26275592 Msa0496070:intron 40.0%
CAAGGTTATACCAAACGCTT+CGG + chr3_4:26275651-26275670 Msa0496070:CDS 40.0%
TTATACCAAACGCTTCGGAT+TGG + chr3_4:26275656-26275675 Msa0496070:CDS 40.0%
ACCCAAAGTCTTCTGCATAT+TGG + chr3_4:26275712-26275731 Msa0496070:CDS 40.0%
!!! CTTCTGCATATTGGTTTTCG+CGG + chr3_4:26275721-26275740 Msa0496070:CDS 40.0%
TTCGCGGTTTCTTAAAGATG+GGG + chr3_4:26275737-26275756 Msa0496070:CDS 40.0%
TAAAGATGGGGCAAACAAGA+AGG + chr3_4:26275749-26275768 Msa0496070:CDS 40.0%
AAAGATGGGGCAAACAAGAA+GGG + chr3_4:26275750-26275769 Msa0496070:CDS 40.0%
ATGCTTGGTATAAACTAGCG+TGG + chr3_4:26275870-26275889 Msa0496070:three_prime_UTR 40.0%
ATCAAGCAATTGAGCTCAAG+TGG + chr3_4:26275994-26276013 Msa0496070:three_prime_UTR 40.0%
CTCCGAAGATGAAGTCAGAA+GGG - chr3_4:26268935-26268954 None:intergenic 45.0%
ACTCCGAAGATGAAGTCAGA+AGG - chr3_4:26268936-26268955 None:intergenic 45.0%
AGGAACCTGATAAGCAGAAG+TGG - chr3_4:26268961-26268980 None:intergenic 45.0%
ATAGATGTTGGGTCACTGAG+GGG - chr3_4:26269208-26269227 None:intergenic 45.0%
CTATAGATGTTGGGTCACTG+AGG - chr3_4:26269210-26269229 None:intergenic 45.0%
TAGTCCCACCACCTATTCTA+TGG + chr3_4:26269470-26269489 Msa0496070:intron 45.0%
GGTACCATAGAATAGGTGGT+GGG - chr3_4:26269477-26269496 None:intergenic 45.0%
AGGTACCATAGAATAGGTGG+TGG - chr3_4:26269478-26269497 None:intergenic 45.0%
! ACGAGGTACCATAGAATAGG+TGG - chr3_4:26269481-26269500 None:intergenic 45.0%
!! GAGAGTGATGGTGATGGTTT+AGG + chr3_4:26269696-26269715 Msa0496070:intron 45.0%
!! GAGTGATGGTGATGGTTTAG+GGG + chr3_4:26269698-26269717 Msa0496070:intron 45.0%
AGGAACAGAAAACCGTGGAT+AGG - chr3_4:26270188-26270207 None:intergenic 45.0%
!! ATAGAAGGTGCTAGCAAGGA+GGG + chr3_4:26270382-26270401 Msa0496070:CDS 45.0%
GTGGTAGAGGTCCTAGTATA+TGG + chr3_4:26270404-26270423 Msa0496070:CDS 45.0%
GCATAGGCATCCCATATACT+AGG - chr3_4:26270418-26270437 None:intergenic 45.0%
ACTTGGTTGAGTCAGCTACA+TGG - chr3_4:26270679-26270698 None:intergenic 45.0%
CGCAGATATCTTTCCTCACT+TGG - chr3_4:26270696-26270715 None:intergenic 45.0%
CGTGCTCAAAAATAGACTCG+GGG - chr3_4:26270809-26270828 None:intergenic 45.0%
! TCTTGGTCTCGTATTTTCCC+TGG + chr3_4:26271009-26271028 Msa0496070:CDS 45.0%
TTCTAGGCTTAAGGCTCTCA+TGG - chr3_4:26271110-26271129 None:intergenic 45.0%
GGAGGAGCTGATAAACTTCT+AGG - chr3_4:26271126-26271145 None:intergenic 45.0%
!! TGACCAAGTATTGATGACGG+AGG - chr3_4:26271144-26271163 None:intergenic 45.0%
! TTTCTGGGAGGGAATTACCT+TGG + chr3_4:26271237-26271256 Msa0496070:intron 45.0%
! TTTTCGTCTTACCGCCAGAT+AGG + chr3_4:26271351-26271370 Msa0496070:intron 45.0%
CACAGGCTTTACCATAGGAA+AGG + chr3_4:26271478-26271497 Msa0496070:intron 45.0%
! GGTAAAGGTTTGGAGCCATT+TGG - chr3_4:26271771-26271790 None:intergenic 45.0%
! CTCTGTAGTGTGAGAGTATG+GGG - chr3_4:26271876-26271895 None:intergenic 45.0%
CATCTTGATGAGTCAATGGG+AGG + chr3_4:26272312-26272331 Msa0496070:CDS 45.0%
TTGATGAGTCAATGGGAGGA+TGG + chr3_4:26272316-26272335 Msa0496070:CDS 45.0%
AATGGAAACAGCTGCTGCAT+GGG - chr3_4:26272871-26272890 None:intergenic 45.0%
AAATGGAAACAGCTGCTGCA+TGG - chr3_4:26272872-26272891 None:intergenic 45.0%
GATGTTCCAGGATAAGCAAG+GGG + chr3_4:26273103-26273122 Msa0496070:intron 45.0%
ATGTTCCAGGATAAGCAAGG+GGG + chr3_4:26273104-26273123 Msa0496070:intron 45.0%
GCTGGTTGTAGACTCTGAAT+GGG + chr3_4:26273136-26273155 Msa0496070:CDS 45.0%
! ACCTAGATTTTCGTCTTGGC+TGG + chr3_4:26273207-26273226 Msa0496070:CDS 45.0%
ACCAGCCAAGACGAAAATCT+AGG - chr3_4:26273211-26273230 None:intergenic 45.0%
AGTCGTTCACGCATAACTTC+AGG - chr3_4:26273560-26273579 None:intergenic 45.0%
! AGACCGACTTCCCAAATTCT+CGG + chr3_4:26273583-26273602 Msa0496070:CDS 45.0%
TTCACAGTTGAATGGGAAGG+CGG + chr3_4:26273816-26273835 Msa0496070:intron 45.0%
TATAACAGGCAGCATCAGAG+TGG + chr3_4:26273957-26273976 Msa0496070:intron 45.0%
ATGTTGTTCCTTGGGGTCTT+CGG + chr3_4:26273984-26274003 Msa0496070:intron 45.0%
ATAATCTTCCGAAGACCCCA+AGG - chr3_4:26273995-26274014 None:intergenic 45.0%
CCGATATATGTCACCGAGAA+TGG + chr3_4:26274043-26274062 Msa0496070:intron 45.0%
TATGGCTCAACAAGGAAGAG+TGG + chr3_4:26274532-26274551 Msa0496070:intron 45.0%
CTGCAACCTAGGAATATGAC+TGG + chr3_4:26274576-26274595 Msa0496070:intron 45.0%
ACCTAGGAATATGACTGGCA+TGG + chr3_4:26274581-26274600 Msa0496070:intron 45.0%
ACTGCGAGTTCGCTATTACA+AGG + chr3_4:26274811-26274830 Msa0496070:CDS 45.0%
CTGCGAGTTCGCTATTACAA+GGG + chr3_4:26274812-26274831 Msa0496070:CDS 45.0%
ATACCTTGCATCACTTGTGC+AGG + chr3_4:26274835-26274854 Msa0496070:CDS 45.0%
TTAGAACAGGGTCAGACACT+TGG + chr3_4:26275338-26275357 Msa0496070:intron 45.0%
GGTCAGTTGTTATGTTAGGC+TGG - chr3_4:26275487-26275506 None:intergenic 45.0%
ATGTGAGAGGACACTTTGCA+TGG + chr3_4:26275601-26275620 Msa0496070:CDS 45.0%
! ATAGACCAATCCGAAGCGTT+TGG - chr3_4:26275664-26275683 None:intergenic 45.0%
!!! AAAACATATATATATTTTTT+TGG + chr3_4:26269583-26269602 Msa0496070:intron 5.0%
!!! AAACATATATATATTTTTTT+GGG + chr3_4:26269584-26269603 Msa0496070:intron 5.0%
!! AATAATTTAACATAAAAATT+AGG - chr3_4:26270208-26270227 None:intergenic 5.0%
AGTCGCCACTTCTGCTTATC+AGG + chr3_4:26268953-26268972 Msa0496070:CDS 50.0%
GTTGTGTGCAAGTGTGGGAT+CGG + chr3_4:26269048-26269067 Msa0496070:intron 50.0%
TGGTGTCTCTCTCGCTTATG+CGG + chr3_4:26269148-26269167 Msa0496070:intron 50.0%
TTCTCAGTGTCTCTCTGGCT+AGG + chr3_4:26269664-26269683 Msa0496070:intron 50.0%
TCTCAGTGTCTCTCTGGCTA+GGG + chr3_4:26269665-26269684 Msa0496070:intron 50.0%
AGGGGCGAAATTGAGAGTGA+TGG + chr3_4:26269684-26269703 Msa0496070:intron 50.0%
!! GATAGAAGGTGCTAGCAAGG+AGG + chr3_4:26270381-26270400 Msa0496070:intron 50.0%
! GTAGCTGACTCAACCAAGTG+AGG + chr3_4:26270680-26270699 Msa0496070:intron 50.0%
GTACGCGTTGAAACCCAACT+TGG - chr3_4:26270977-26270996 None:intergenic 50.0%
GCTTAAGGCTCTCATGGACA+TGG - chr3_4:26271104-26271123 None:intergenic 50.0%
GCTCCTCCGTCATCAATACT+TGG + chr3_4:26271138-26271157 Msa0496070:intron 50.0%
TTGCACTCTCTCCTATCTGG+CGG - chr3_4:26271365-26271384 None:intergenic 50.0%
! GGTTTGGAGCCATTTGGCTT+GGG - chr3_4:26271765-26271784 None:intergenic 50.0%
! AGGTTTGGAGCCATTTGGCT+TGG - chr3_4:26271766-26271785 None:intergenic 50.0%
GATGCAGTGGAAGATCCCAA+TGG - chr3_4:26272296-26272315 None:intergenic 50.0%
AGCATCATACCCACCAACTG+CGG - chr3_4:26272775-26272794 None:intergenic 50.0%
GATGCTGGAGTTAATGCTCC+TGG + chr3_4:26272789-26272808 Msa0496070:CDS 50.0%
GATAAGCAAGGGGGACAAGT+GGG + chr3_4:26273113-26273132 Msa0496070:CDS 50.0%
ATAAGCAAGGGGGACAAGTG+GGG + chr3_4:26273114-26273133 Msa0496070:CDS 50.0%
! GGCTGGTTGTAGACTCTGAA+TGG + chr3_4:26273135-26273154 Msa0496070:CDS 50.0%
CCTCCGAGAATTTGGGAAGT+CGG - chr3_4:26273589-26273608 None:intergenic 50.0%
ACTTCCCAAATTCTCGGAGG+AGG + chr3_4:26273589-26273608 Msa0496070:CDS 50.0%
TTACGACAAGGCACAACAGC+TGG + chr3_4:26273709-26273728 Msa0496070:CDS 50.0%
GCACAACAGCTGGACAGAAT+TGG + chr3_4:26273719-26273738 Msa0496070:CDS 50.0%
TCACAGTTGAATGGGAAGGC+GGG + chr3_4:26273817-26273836 Msa0496070:intron 50.0%
CACCGACAGAGAGACATAGA+TGG - chr3_4:26273868-26273887 None:intergenic 50.0%
GCCATGCCAGTCATATTCCT+AGG - chr3_4:26274585-26274604 None:intergenic 50.0%
TAGCCTGCACAAGTGATGCA+AGG - chr3_4:26274841-26274860 None:intergenic 50.0%
! GACAACTTCGAATGGGCTCA+AGG + chr3_4:26275633-26275652 Msa0496070:CDS 50.0%
TCTCGCTTATGCGGTTGCTC+TGG + chr3_4:26269157-26269176 Msa0496070:intron 55.0%
GGTTGCTCTGGCCTCAATGT+GGG + chr3_4:26269169-26269188 Msa0496070:intron 55.0%
GAGATAGCTCACGCTCTTGC+CGG + chr3_4:26269429-26269448 Msa0496070:intron 55.0%
AGATAGCTCACGCTCTTGCC+GGG + chr3_4:26269430-26269449 Msa0496070:intron 55.0%
CTCAGTGTCTCTCTGGCTAG+GGG + chr3_4:26269666-26269685 Msa0496070:intron 55.0%
! CCATCTTATCGGTTGGGCCA+AGG - chr3_4:26271257-26271276 None:intergenic 55.0%
CCTTGGCCCAACCGATAAGA+TGG + chr3_4:26271254-26271273 Msa0496070:intron 55.0%
!! CCATTTGGCTTGGGAGGTTC+CGG - chr3_4:26271756-26271775 None:intergenic 55.0%
!! TTGGAGCCATTTGGCTTGGG+AGG - chr3_4:26271762-26271781 None:intergenic 55.0%
CCACCAACTGCGGTTTGAAG+GGG - chr3_4:26272765-26272784 None:intergenic 55.0%
CCCACCAACTGCGGTTTGAA+GGG - chr3_4:26272766-26272785 None:intergenic 55.0%
CCCTTCAAACCGCAGTTGGT+GGG + chr3_4:26272763-26272782 Msa0496070:CDS 55.0%
ACCCACCAACTGCGGTTTGA+AGG - chr3_4:26272767-26272786 None:intergenic 55.0%
!! GCAGTTGGTGGGTATGATGC+TGG + chr3_4:26272774-26272793 Msa0496070:CDS 55.0%
CTTGTCCCCCTTGCTTATCC+TGG - chr3_4:26273112-26273131 None:intergenic 55.0%
GGATAAGCAAGGGGGACAAG+TGG + chr3_4:26273112-26273131 Msa0496070:intron 55.0%
ATCTAGGTGTCTCGCAGCAG+CGG - chr3_4:26273195-26273214 None:intergenic 55.0%
CCGACTTCCCAAATTCTCGG+AGG + chr3_4:26273586-26273605 Msa0496070:CDS 55.0%
CACAGTTGAATGGGAAGGCG+GGG + chr3_4:26273818-26273837 Msa0496070:intron 55.0%
AGGGATGGAGCTGATGTGAG+AGG + chr3_4:26275588-26275607 Msa0496070:intron 55.0%
CGGTTGCTCTGGCCTCAATG+TGG + chr3_4:26269168-26269187 Msa0496070:intron 60.0%
TGCTCTGGCCTCAATGTGGG+CGG + chr3_4:26269172-26269191 Msa0496070:intron 60.0%
GATAGCTCACGCTCTTGCCG+GGG + chr3_4:26269431-26269450 Msa0496070:intron 60.0%
!! GGGTGTCGGAATTCGAACCC+CGG + chr3_4:26269606-26269625 Msa0496070:intron 60.0%
!! GAAGGTGCTAGCAAGGAGGG+TGG + chr3_4:26270385-26270404 Msa0496070:CDS 60.0%
GCTAGCAAGGAGGGTGGTAG+AGG + chr3_4:26270391-26270410 Msa0496070:CDS 60.0%
!! TTGGCTTGGGAGGTTCCGGA+TGG - chr3_4:26271752-26271771 None:intergenic 60.0%
CCGGAACCTCCCAAGCCAAA+TGG + chr3_4:26271753-26271772 Msa0496070:intron 60.0%
GAGCCCCTTCAAACCGCAGT+TGG + chr3_4:26272759-26272778 Msa0496070:CDS 60.0%
CCCCTTCAAACCGCAGTTGG+TGG + chr3_4:26272762-26272781 Msa0496070:CDS 60.0%
CGGGGAGCTCATTGGTGAGA+AGG + chr3_4:26273836-26273855 Msa0496070:intron 60.0%
TTGGGTCACTGAGGGGAGCC+GGG - chr3_4:26269201-26269220 None:intergenic 65.0%
GTTGGGTCACTGAGGGGAGC+CGG - chr3_4:26269202-26269221 None:intergenic 65.0%
TGGGAAGGCGGGGAGCTCAT+TGG + chr3_4:26273828-26273847 Msa0496070:intron 65.0%
CCTCAATGTGGGCGGCTCCC+CGG + chr3_4:26269180-26269199 Msa0496070:intron 70.0%
TGGGTCACTGAGGGGAGCCG+GGG - chr3_4:26269200-26269219 None:intergenic 70.0%
GCAAGGGGGACAAGTGGGGC+TGG + chr3_4:26273118-26273137 Msa0496070:CDS 70.0%
CCGGGGAGCCGCCCACATTG+AGG - chr3_4:26269183-26269202 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 26268801 26276020 26268801 ID=Msa0496070;Name=Msa0496070
chr3_4 mRNA 26268801 26276020 26268801 ID=Msa0496070-mRNA-1;Parent=Msa0496070;Name=Msa0496070-mRNA-1;_AED=0.18;_eAED=0.18;_QI=54|0.9|1|1|1|1|11|238|447
chr3_4 exon 26268801 26268974 26268801 ID=Msa0496070-mRNA-1:exon:6278;Parent=Msa0496070-mRNA-1
chr3_4 exon 26270382 26270448 26270382 ID=Msa0496070-mRNA-1:exon:6279;Parent=Msa0496070-mRNA-1
chr3_4 exon 26270519 26270577 26270519 ID=Msa0496070-mRNA-1:exon:6280;Parent=Msa0496070-mRNA-1
chr3_4 exon 26270955 26271030 26270955 ID=Msa0496070-mRNA-1:exon:6281;Parent=Msa0496070-mRNA-1
chr3_4 exon 26272115 26272189 26272115 ID=Msa0496070-mRNA-1:exon:6282;Parent=Msa0496070-mRNA-1
chr3_4 exon 26272268 26272355 26272268 ID=Msa0496070-mRNA-1:exon:6283;Parent=Msa0496070-mRNA-1
chr3_4 exon 26272683 26272908 26272683 ID=Msa0496070-mRNA-1:exon:6284;Parent=Msa0496070-mRNA-1
chr3_4 exon 26273113 26273228 26273113 ID=Msa0496070-mRNA-1:exon:6285;Parent=Msa0496070-mRNA-1
chr3_4 exon 26273526 26273740 26273526 ID=Msa0496070-mRNA-1:exon:6286;Parent=Msa0496070-mRNA-1
chr3_4 exon 26274756 26274864 26274756 ID=Msa0496070-mRNA-1:exon:6287;Parent=Msa0496070-mRNA-1
chr3_4 exon 26275590 26276020 26275590 ID=Msa0496070-mRNA-1:exon:6288;Parent=Msa0496070-mRNA-1
chr3_4 five_prime_UTR 26268801 26268854 26268801 ID=Msa0496070-mRNA-1:five_prime_utr;Parent=Msa0496070-mRNA-1
chr3_4 CDS 26268855 26268974 26268855 ID=Msa0496070-mRNA-1:cds;Parent=Msa0496070-mRNA-1
chr3_4 CDS 26270382 26270448 26270382 ID=Msa0496070-mRNA-1:cds;Parent=Msa0496070-mRNA-1
chr3_4 CDS 26270519 26270577 26270519 ID=Msa0496070-mRNA-1:cds;Parent=Msa0496070-mRNA-1
chr3_4 CDS 26270955 26271030 26270955 ID=Msa0496070-mRNA-1:cds;Parent=Msa0496070-mRNA-1
chr3_4 CDS 26272115 26272189 26272115 ID=Msa0496070-mRNA-1:cds;Parent=Msa0496070-mRNA-1
chr3_4 CDS 26272268 26272355 26272268 ID=Msa0496070-mRNA-1:cds;Parent=Msa0496070-mRNA-1
chr3_4 CDS 26272683 26272908 26272683 ID=Msa0496070-mRNA-1:cds;Parent=Msa0496070-mRNA-1
chr3_4 CDS 26273113 26273228 26273113 ID=Msa0496070-mRNA-1:cds;Parent=Msa0496070-mRNA-1
chr3_4 CDS 26273526 26273740 26273526 ID=Msa0496070-mRNA-1:cds;Parent=Msa0496070-mRNA-1
chr3_4 CDS 26274756 26274864 26274756 ID=Msa0496070-mRNA-1:cds;Parent=Msa0496070-mRNA-1
chr3_4 CDS 26275590 26275782 26275590 ID=Msa0496070-mRNA-1:cds;Parent=Msa0496070-mRNA-1
chr3_4 three_prime_UTR 26275783 26276020 26275783 ID=Msa0496070-mRNA-1:three_prime_utr;Parent=Msa0496070-mRNA-1
Gene Sequence

>Msa0496070

ATGGTAAAGAAAGAAGAATTTCTGAGAGAAAATGGTTTTGAGAAAGAAGGACAAGAAGAAGTCTCACGCAGTGACTTCCCTTCTGACTTCATCTTCGGAGTCGCCACTTCTGCTTATCAGATAGAAGGTGCTAGCAAGGAGGGTGGTAGAGGTCCTAGTATATGGGATGCCTATGCTTATACTGAAGGAAAAATACTCGACAAAAGCAATGGCGATGTAGCAGTTGATCATTATCATCGTTATAAGGAAGATATTGATCTTATAGCCAAGTTGGGTTTCAACGCGTACAGATTTTCAATTTCTTGGTCTCGTATTTTCCCTGATGGCTTAGGAACCAATGTCAATGATGAAGGCATAACATTTTACAACAACATTATCAATGCTCTTCTTGAAAAAGGTATTCAACCTTTTGTAACTTTGTACCATTGGGATCTTCCACTGCATCTTGATGAGTCAATGGGAGGATGGTTGAATAAAAATATCATAGAATATTTTGCACTCTATGCAGATACTTGCTTTGCAAGTTTTGGCGATAAAGTGAAAAACTGGATTACTATTAACGAGCCCCTTCAAACCGCAGTTGGTGGGTATGATGCTGGAGTTAATGCTCCTGGAAGAAGTCAAAATAGATCAGTAGAACCATACTTAGCAGCACATCATCAAATCTTGGCCCATGCAGCAGCTGTTTCCATTTACCGAAGCAAGTACAAGGATAAGCAAGGGGGACAAGTGGGGCTGGTTGTAGACTCTGAATGGGCAGAGCCAAACTCTGATAAGATTGAAGATAAATCCGCTGCTGCGAGACACCTAGATTTTCGTCTTGGCTGGTTCTTGCATCCACTATATTATGGAGACTATCCTGAAGTTATGCGTGAACGACTTAGAGACCGACTTCCCAAATTCTCGGAGGAGGATAAAAAATTTCTTTTGAATTCTTTGGACTTCATTGGCCTAAATCACTATACAACGAGGTTAATTTCACATGTGACAGAAAGCACCGAAGAATGTCATTACGACAAGGCACAACAGCTGGACAGAATTGGTATGGATGATGAAGACAATGATAGCTTGCCACTAAATGAGATGCTAGATGACAAACTGCGAGTTCGCTATTACAAGGGATACCTTGCATCACTTGTGCAGGCTATAAAGGATGGAGCTGATGTGAGAGGACACTTTGCATGGTCATTACTTGACAACTTCGAATGGGCTCAAGGTTATACCAAACGCTTCGGATTGGTCTATGTAGATTACAAAAATGGACTCACTAGGCACCCAAAGTCTTCTGCATATTGGTTTTCGCGGTTTCTTAAAGATGGGGCAAACAAGAAGGGTAAAGAATAG

Protein sequence

>Msa0496070

MVKKEEFLRENGFEKEGQEEVSRSDFPSDFIFGVATSAYQIEGASKEGGRGPSIWDAYAYTEGKILDKSNGDVAVDHYHRYKEDIDLIAKLGFNAYRFSISWSRIFPDGLGTNVNDEGITFYNNIINALLEKGIQPFVTLYHWDLPLHLDESMGGWLNKNIIEYFALYADTCFASFGDKVKNWITINEPLQTAVGGYDAGVNAPGRSQNRSVEPYLAAHHQILAHAAAVSIYRSKYKDKQGGQVGLVVDSEWAEPNSDKIEDKSAAARHLDFRLGWFLHPLYYGDYPEVMRERLRDRLPKFSEEDKKFLLNSLDFIGLNHYTTRLISHVTESTEECHYDKAQQLDRIGMDDEDNDSLPLNEMLDDKLRVRYYKGYLASLVQAIKDGADVRGHFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLTRHPKSSAYWFSRFLKDGANKKGKE*