Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385730 | XP_003625516.1 | 100.000 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 8.07e-158 | 445 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385730 | sp|O24466|RAE1A_ARATH | 94.175 | 206 | 12 | 0 | 11 | 216 | 11 | 216 | 3.93e-145 | 405 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385730 | G7L0L9 | 100.000 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 3.85e-158 | 445 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa1385730 | 0.800746 | 1.246969e-48 | -8.615850e-47 |
| Msa0010490 | Msa1385730 | 0.806123 | 9.582883e-50 | -8.615850e-47 |
| Msa0080730 | Msa1385730 | 0.820527 | 6.542586e-53 | -8.615850e-47 |
| Msa0093010 | Msa1385730 | 0.816517 | 5.308538e-52 | -8.615850e-47 |
| Msa1352890 | Msa1385730 | 0.800362 | 1.493345e-48 | -8.615850e-47 |
| Msa1376660 | Msa1385730 | 0.801578 | 8.429888e-49 | -8.615850e-47 |
| Msa1385730 | Msa1434100 | 0.870582 | 1.308755e-66 | -8.615850e-47 |
| Msa0610550 | Msa1385730 | 0.811166 | 8.020784e-51 | -8.615850e-47 |
| Msa0712860 | Msa1385730 | 0.812374 | 4.378958e-51 | -8.615850e-47 |
| Msa0800370 | Msa1385730 | 0.800870 | 1.176682e-48 | -8.615850e-47 |
| Msa0800480 | Msa1385730 | 0.808049 | 3.749047e-50 | -8.615850e-47 |
| Msa0120880 | Msa1385730 | 0.802150 | 6.429957e-49 | -8.615850e-47 |
| Msa0144430 | Msa1385730 | 0.800915 | 1.151858e-48 | -8.615850e-47 |
| Msa0194920 | Msa1385730 | 0.809978 | 1.448236e-50 | -8.615850e-47 |
| Msa0202490 | Msa1385730 | 0.831742 | 1.405144e-55 | -8.615850e-47 |
| Msa1277410 | Msa1385730 | 0.811474 | 6.874586e-51 | -8.615850e-47 |
| Msa1307160 | Msa1385730 | 0.805566 | 1.254685e-49 | -8.615850e-47 |
| Msa1316360 | Msa1385730 | 0.810889 | 9.209764e-51 | -8.615850e-47 |
| Msa1336560 | Msa1385730 | 0.804677 | 1.925795e-49 | -8.615850e-47 |
| Msa1341060 | Msa1385730 | 0.851929 | 6.440575e-61 | -8.615850e-47 |
| Msa0385500 | Msa1385730 | 0.839312 | 1.708306e-57 | -8.615850e-47 |
| Msa0437010 | Msa1385730 | 0.895246 | 1.149995e-75 | -8.615850e-47 |
| Msa1039810 | Msa1385730 | 0.832479 | 9.236249e-56 | -8.615850e-47 |
| Msa1039900 | Msa1385730 | 0.801168 | 1.022472e-48 | -8.615850e-47 |
| Msa0245580 | Msa1385730 | 0.834269 | 3.304064e-56 | -8.615850e-47 |
| Msa0257490 | Msa1385730 | 0.809477 | 1.856125e-50 | -8.615850e-47 |
| Msa0269470 | Msa1385730 | 0.815508 | 8.916791e-52 | -8.615850e-47 |
| Msa0284180 | Msa1385730 | 0.839781 | 1.290589e-57 | -8.615850e-47 |
| Msa1123780 | Msa1385730 | 0.995311 | 5.087061e-215 | -8.615850e-47 |
| Msa1128270 | Msa1385730 | 0.820459 | 6.782010e-53 | -8.615850e-47 |
| Msa1128280 | Msa1385730 | 0.841730 | 3.979153e-58 | -8.615850e-47 |
| Msa1165270 | Msa1385730 | 0.852162 | 5.530081e-61 | -8.615850e-47 |
| Msa1165780 | Msa1385730 | 0.819723 | 1.000077e-52 | -8.615850e-47 |
| Msa1169920 | Msa1385730 | 0.998850 | 4.913754e-279 | -8.615850e-47 |
| Msa0485710 | Msa1385730 | 0.803651 | 3.149386e-49 | -8.615850e-47 |
| Msa0588260 | Msa1385730 | 0.812605 | 3.896923e-51 | -8.615850e-47 |
| Msa0881530 | Msa1385730 | -0.802007 | 6.881042e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385730 | MtrunA17_Chr7g0263071 | 100.000 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 7.42e-162 | 445 |
| Msa1385730 | MtrunA17_Chr1g0182321 | 94.907 | 216 | 11 | 0 | 1 | 216 | 1 | 216 | 7.40e-157 | 432 |
| Msa1385730 | MtrunA17_Chr1g0182301 | 94.444 | 216 | 12 | 0 | 1 | 216 | 1 | 216 | 4.68e-156 | 431 |
| Msa1385730 | MtrunA17_Chr1g0212521 | 94.634 | 205 | 11 | 0 | 11 | 215 | 11 | 215 | 8.55e-145 | 402 |
| Msa1385730 | MtrunA17_Chr4g0030911 | 95.122 | 205 | 9 | 1 | 11 | 215 | 11 | 214 | 7.16e-144 | 399 |
| Msa1385730 | MtrunA17_Chr2g0327911 | 77.315 | 216 | 45 | 3 | 1 | 215 | 1 | 213 | 2.60e-117 | 332 |
| Msa1385730 | MtrunA17_Chr7g0250531 | 61.058 | 208 | 70 | 4 | 11 | 216 | 4 | 202 | 2.87e-87 | 256 |
| Msa1385730 | MtrunA17_Chr4g0055651 | 59.135 | 208 | 74 | 4 | 11 | 216 | 4 | 202 | 4.67e-86 | 253 |
| Msa1385730 | MtrunA17_Chr8g0335471 | 59.809 | 209 | 72 | 4 | 11 | 216 | 4 | 203 | 1.63e-84 | 249 |
| Msa1385730 | MtrunA17_Chr2g0276931 | 55.288 | 208 | 81 | 4 | 11 | 215 | 5 | 203 | 8.75e-80 | 237 |
| Msa1385730 | MtrunA17_Chr6g0458081 | 47.368 | 209 | 103 | 4 | 12 | 214 | 3 | 210 | 1.16e-60 | 189 |
| Msa1385730 | MtrunA17_Chr2g0290891 | 46.890 | 209 | 103 | 3 | 12 | 213 | 3 | 210 | 8.42e-60 | 186 |
| Msa1385730 | MtrunA17_Chr3g0112681 | 45.327 | 214 | 104 | 4 | 11 | 216 | 8 | 216 | 1.47e-59 | 186 |
| Msa1385730 | MtrunA17_Chr4g0032201 | 42.991 | 214 | 116 | 3 | 7 | 216 | 4 | 215 | 3.37e-59 | 185 |
| Msa1385730 | MtrunA17_Chr2g0283131 | 44.495 | 218 | 108 | 3 | 7 | 216 | 5 | 217 | 1.28e-57 | 181 |
| Msa1385730 | MtrunA17_Chr4g0046261 | 44.954 | 218 | 107 | 5 | 7 | 216 | 5 | 217 | 3.93e-57 | 180 |
| Msa1385730 | MtrunA17_Chr2g0276941 | 43.128 | 211 | 114 | 2 | 11 | 216 | 11 | 220 | 4.31e-57 | 180 |
| Msa1385730 | MtrunA17_Chr4g0040781 | 45.413 | 218 | 106 | 5 | 7 | 216 | 5 | 217 | 1.33e-56 | 179 |
| Msa1385730 | MtrunA17_Chr1g0189361 | 42.991 | 214 | 107 | 4 | 13 | 214 | 12 | 222 | 8.04e-56 | 177 |
| Msa1385730 | MtrunA17_Chr2g0315551 | 43.721 | 215 | 114 | 3 | 7 | 216 | 5 | 217 | 1.50e-55 | 176 |
| Msa1385730 | MtrunA17_Chr1g0180291 | 48.309 | 207 | 96 | 7 | 12 | 214 | 11 | 210 | 1.01e-54 | 174 |
| Msa1385730 | MtrunA17_Chr3g0123821 | 42.453 | 212 | 108 | 4 | 13 | 214 | 14 | 221 | 1.82e-54 | 173 |
| Msa1385730 | MtrunA17_Chr7g0265001 | 45.673 | 208 | 101 | 5 | 12 | 214 | 13 | 213 | 2.24e-54 | 173 |
| Msa1385730 | MtrunA17_Chr8g0349711 | 47.312 | 186 | 91 | 3 | 14 | 195 | 5 | 187 | 2.59e-54 | 172 |
| Msa1385730 | MtrunA17_Chr8g0381841 | 43.396 | 212 | 111 | 4 | 13 | 216 | 15 | 225 | 4.00e-54 | 172 |
| Msa1385730 | MtrunA17_Chr3g0130271 | 44.712 | 208 | 104 | 5 | 11 | 214 | 8 | 208 | 1.89e-53 | 170 |
| Msa1385730 | MtrunA17_Chr8g0384311 | 44.393 | 214 | 105 | 7 | 6 | 214 | 4 | 208 | 3.78e-53 | 169 |
| Msa1385730 | MtrunA17_Chr8g0349681 | 42.995 | 207 | 115 | 2 | 9 | 213 | 378 | 583 | 5.28e-53 | 179 |
| Msa1385730 | MtrunA17_Chr8g0349681 | 45.763 | 177 | 91 | 2 | 12 | 184 | 172 | 347 | 4.92e-48 | 166 |
| Msa1385730 | MtrunA17_Chr8g0349681 | 49.045 | 157 | 79 | 1 | 14 | 170 | 12 | 167 | 5.17e-46 | 160 |
| Msa1385730 | MtrunA17_Chr2g0319951 | 49.123 | 171 | 86 | 1 | 7 | 177 | 5 | 174 | 5.46e-53 | 169 |
| Msa1385730 | MtrunA17_Chr1g0159481 | 45.411 | 207 | 103 | 6 | 11 | 213 | 13 | 213 | 1.59e-52 | 168 |
| Msa1385730 | MtrunA17_Chr1g0174281 | 41.589 | 214 | 111 | 4 | 13 | 215 | 13 | 223 | 1.85e-52 | 168 |
| Msa1385730 | MtrunA17_Chr2g0325091 | 42.991 | 214 | 108 | 4 | 11 | 216 | 7 | 214 | 1.90e-52 | 168 |
| Msa1385730 | MtrunA17_Chr1g0197331 | 42.857 | 217 | 115 | 6 | 1 | 214 | 1 | 211 | 7.26e-52 | 166 |
| Msa1385730 | MtrunA17_Chr7g0234201 | 41.951 | 205 | 113 | 3 | 14 | 214 | 12 | 214 | 7.28e-52 | 166 |
| Msa1385730 | MtrunA17_Chr8g0346421 | 46.667 | 165 | 87 | 1 | 13 | 177 | 24 | 187 | 7.12e-51 | 164 |
| Msa1385730 | MtrunA17_Chr8g0351861 | 42.647 | 204 | 113 | 2 | 13 | 213 | 14 | 216 | 1.41e-50 | 164 |
| Msa1385730 | MtrunA17_Chr6g0482721 | 41.262 | 206 | 116 | 2 | 13 | 214 | 10 | 214 | 5.69e-50 | 162 |
| Msa1385730 | MtrunA17_Chr7g0275991 | 40.099 | 202 | 115 | 2 | 7 | 203 | 12 | 212 | 1.30e-49 | 161 |
| Msa1385730 | MtrunA17_Chr7g0214241 | 39.130 | 207 | 119 | 4 | 14 | 214 | 14 | 219 | 3.22e-49 | 160 |
| Msa1385730 | MtrunA17_Chr8g0392931 | 44.076 | 211 | 104 | 4 | 13 | 214 | 12 | 217 | 1.73e-47 | 155 |
| Msa1385730 | MtrunA17_Chr7g0231131 | 45.455 | 165 | 89 | 1 | 13 | 177 | 13 | 176 | 1.92e-47 | 155 |
| Msa1385730 | MtrunA17_Chr3g0109721 | 38.191 | 199 | 111 | 4 | 17 | 214 | 12 | 199 | 1.12e-44 | 147 |
| Msa1385730 | MtrunA17_Chr1g0199331 | 44.242 | 165 | 90 | 2 | 16 | 179 | 32 | 195 | 1.18e-44 | 147 |
| Msa1385730 | MtrunA17_Chr8g0390561 | 39.698 | 199 | 109 | 4 | 17 | 215 | 11 | 198 | 1.30e-44 | 147 |
| Msa1385730 | MtrunA17_Chr5g0433561 | 36.869 | 198 | 115 | 3 | 17 | 214 | 12 | 199 | 9.44e-44 | 145 |
| Msa1385730 | MtrunA17_Chr8g0382221 | 38.191 | 199 | 110 | 3 | 17 | 205 | 11 | 206 | 9.92e-42 | 140 |
| Msa1385730 | MtrunA17_Chr4g0034871 | 39.901 | 203 | 108 | 7 | 5 | 198 | 2 | 199 | 7.12e-41 | 138 |
| Msa1385730 | MtrunA17_Chr5g0400131 | 36.364 | 209 | 127 | 3 | 5 | 213 | 3 | 205 | 1.08e-39 | 135 |
| Msa1385730 | MtrunA17_Chr3g0123971 | 42.405 | 158 | 90 | 1 | 17 | 174 | 11 | 167 | 3.35e-39 | 134 |
| Msa1385730 | MtrunA17_Chr4g0055081 | 40.000 | 170 | 97 | 2 | 5 | 174 | 3 | 167 | 1.36e-38 | 132 |
| Msa1385730 | MtrunA17_Chr2g0331691 | 37.379 | 206 | 115 | 6 | 15 | 214 | 10 | 207 | 7.70e-37 | 128 |
| Msa1385730 | MtrunA17_Chr6g0466301 | 40.120 | 167 | 94 | 3 | 15 | 175 | 8 | 174 | 2.97e-36 | 126 |
| Msa1385730 | MtrunA17_Chr6g0465491 | 40.120 | 167 | 94 | 3 | 15 | 175 | 8 | 174 | 2.97e-36 | 126 |
| Msa1385730 | MtrunA17_Chr8g0383261 | 37.853 | 177 | 104 | 2 | 15 | 185 | 12 | 188 | 6.01e-36 | 125 |
| Msa1385730 | MtrunA17_Chr4g0004661 | 37.864 | 206 | 114 | 6 | 15 | 214 | 64 | 261 | 6.88e-36 | 127 |
| Msa1385730 | MtrunA17_Chr1g0201121 | 35.176 | 199 | 121 | 3 | 15 | 205 | 8 | 206 | 1.53e-35 | 124 |
| Msa1385730 | MtrunA17_Chr6g0466161 | 34.444 | 180 | 112 | 3 | 32 | 205 | 7 | 186 | 8.29e-27 | 102 |
| Msa1385730 | MtrunA17_Chr6g0465471 | 33.889 | 180 | 113 | 3 | 32 | 205 | 7 | 186 | 4.53e-26 | 100 |
| Msa1385730 | MtrunA17_Chr1g0178291 | 41.358 | 162 | 87 | 3 | 18 | 179 | 431 | 584 | 1.34e-25 | 103 |
| Msa1385730 | MtrunA17_Chr2g0325101 | 32.934 | 167 | 99 | 5 | 15 | 170 | 6 | 170 | 1.87e-25 | 98.2 |
| Msa1385730 | MtrunA17_Chr4g0037021 | 32.979 | 188 | 113 | 6 | 15 | 191 | 6 | 191 | 2.74e-25 | 97.8 |
| Msa1385730 | MtrunA17_Chr3g0117931 | 32.335 | 167 | 100 | 5 | 15 | 170 | 8 | 172 | 1.52e-24 | 96.3 |
| Msa1385730 | MtrunA17_Chr3g0138121 | 30.286 | 175 | 117 | 4 | 3 | 177 | 2 | 171 | 2.46e-24 | 95.9 |
| Msa1385730 | MtrunA17_Chr3g0138111 | 30.286 | 175 | 117 | 4 | 3 | 177 | 2 | 171 | 2.98e-24 | 95.9 |
| Msa1385730 | MtrunA17_Chr3g0138101 | 30.286 | 175 | 117 | 4 | 3 | 177 | 2 | 171 | 3.08e-24 | 95.9 |
| Msa1385730 | MtrunA17_Chr8g0371501 | 32.335 | 167 | 100 | 6 | 15 | 170 | 6 | 170 | 3.62e-23 | 92.4 |
| Msa1385730 | MtrunA17_Chr6g0486041 | 31.138 | 167 | 102 | 5 | 15 | 170 | 6 | 170 | 4.78e-23 | 92.4 |
| Msa1385730 | MtrunA17_Chr5g0405791 | 32.335 | 167 | 100 | 6 | 15 | 170 | 6 | 170 | 6.90e-23 | 91.7 |
| Msa1385730 | MtrunA17_Chr4g0046211 | 34.677 | 124 | 78 | 3 | 15 | 137 | 6 | 127 | 2.58e-22 | 88.6 |
| Msa1385730 | MtrunA17_Chr6g0466431 | 35.789 | 95 | 52 | 1 | 15 | 109 | 8 | 93 | 6.20e-17 | 73.2 |
| Msa1385730 | MtrunA17_Chr6g0465611 | 35.789 | 95 | 52 | 1 | 15 | 109 | 8 | 93 | 6.20e-17 | 73.2 |
| Msa1385730 | MtrunA17_Chr5g0443631 | 25.466 | 161 | 111 | 3 | 16 | 170 | 105 | 262 | 9.23e-13 | 65.9 |
| Msa1385730 | MtrunA17_Chr5g0434561 | 30.488 | 164 | 95 | 6 | 16 | 170 | 20 | 173 | 6.59e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1385730 | AT3G53610.2 | 94.175 | 206 | 12 | 0 | 11 | 216 | 11 | 216 | 3.99e-146 | 405 |
| Msa1385730 | AT3G53610.3 | 94.175 | 206 | 12 | 0 | 11 | 216 | 11 | 216 | 3.99e-146 | 405 |
| Msa1385730 | AT3G53610.1 | 94.175 | 206 | 12 | 0 | 11 | 216 | 11 | 216 | 3.99e-146 | 405 |
| Msa1385730 | AT5G59840.1 | 95.146 | 206 | 10 | 0 | 11 | 216 | 11 | 216 | 6.76e-146 | 405 |
| Msa1385730 | AT3G46060.2 | 94.175 | 206 | 12 | 0 | 11 | 216 | 11 | 216 | 2.26e-145 | 404 |
| Msa1385730 | AT3G46060.3 | 94.175 | 206 | 12 | 0 | 11 | 216 | 11 | 216 | 2.26e-145 | 404 |
| Msa1385730 | AT3G46060.1 | 94.175 | 206 | 12 | 0 | 11 | 216 | 11 | 216 | 2.26e-145 | 404 |
| Msa1385730 | AT5G03520.1 | 86.916 | 214 | 27 | 1 | 1 | 214 | 1 | 213 | 6.44e-131 | 367 |
| Msa1385730 | AT3G09900.1 | 85.116 | 215 | 31 | 1 | 1 | 214 | 1 | 215 | 2.41e-128 | 361 |
| Msa1385730 | AT5G03520.2 | 86.061 | 165 | 22 | 1 | 50 | 214 | 40 | 203 | 8.03e-104 | 298 |
| Msa1385730 | AT1G02130.1 | 60.287 | 209 | 71 | 4 | 11 | 216 | 4 | 203 | 1.94e-88 | 259 |
| Msa1385730 | AT4G17530.1 | 59.135 | 208 | 74 | 4 | 11 | 216 | 4 | 202 | 1.05e-83 | 247 |
| Msa1385730 | AT5G47200.1 | 58.654 | 208 | 75 | 4 | 11 | 216 | 4 | 202 | 5.61e-83 | 245 |
| Msa1385730 | AT3G11730.1 | 56.938 | 209 | 78 | 4 | 11 | 215 | 4 | 204 | 1.03e-80 | 240 |
| Msa1385730 | AT4G17160.1 | 48.058 | 206 | 102 | 3 | 12 | 215 | 3 | 205 | 1.16e-64 | 199 |
| Msa1385730 | AT4G35860.1 | 48.571 | 210 | 101 | 4 | 12 | 215 | 3 | 211 | 2.34e-64 | 198 |
| Msa1385730 | AT4G17170.1 | 47.143 | 210 | 104 | 4 | 12 | 215 | 3 | 211 | 8.76e-62 | 192 |
| Msa1385730 | AT1G09630.1 | 44.860 | 214 | 113 | 2 | 7 | 216 | 4 | 216 | 4.54e-61 | 190 |
| Msa1385730 | AT3G46830.1 | 43.636 | 220 | 108 | 3 | 7 | 216 | 4 | 217 | 9.74e-58 | 182 |
| Msa1385730 | AT3G46830.2 | 43.636 | 220 | 108 | 3 | 7 | 216 | 4 | 217 | 9.74e-58 | 182 |
| Msa1385730 | AT4G18430.1 | 44.907 | 216 | 106 | 3 | 7 | 214 | 5 | 215 | 1.03e-57 | 182 |
| Msa1385730 | AT1G16920.1 | 45.581 | 215 | 105 | 4 | 7 | 214 | 5 | 214 | 2.66e-57 | 181 |
| Msa1385730 | AT1G07410.1 | 42.056 | 214 | 117 | 3 | 7 | 216 | 4 | 214 | 3.69e-57 | 180 |
| Msa1385730 | AT5G59150.1 | 42.326 | 215 | 118 | 3 | 7 | 216 | 4 | 217 | 4.61e-57 | 180 |
| Msa1385730 | AT5G60860.1 | 44.954 | 218 | 107 | 5 | 7 | 216 | 5 | 217 | 2.77e-56 | 178 |
| Msa1385730 | AT4G39990.1 | 44.340 | 212 | 107 | 4 | 13 | 216 | 15 | 223 | 1.17e-55 | 177 |
| Msa1385730 | AT3G15060.1 | 45.413 | 218 | 106 | 5 | 7 | 216 | 5 | 217 | 1.46e-55 | 176 |
| Msa1385730 | AT3G07410.1 | 42.995 | 207 | 112 | 3 | 13 | 214 | 10 | 215 | 1.55e-55 | 176 |
| Msa1385730 | AT5G45750.1 | 44.340 | 212 | 112 | 3 | 7 | 214 | 5 | 214 | 2.10e-55 | 176 |
| Msa1385730 | AT4G18800.1 | 44.076 | 211 | 112 | 3 | 7 | 214 | 5 | 212 | 1.19e-54 | 174 |
| Msa1385730 | AT5G47520.1 | 43.458 | 214 | 107 | 3 | 13 | 216 | 12 | 221 | 1.76e-54 | 174 |
| Msa1385730 | AT2G33870.1 | 43.379 | 219 | 110 | 4 | 7 | 216 | 5 | 218 | 2.07e-54 | 173 |
| Msa1385730 | AT2G43130.1 | 41.176 | 204 | 117 | 2 | 13 | 214 | 10 | 212 | 6.46e-54 | 172 |
| Msa1385730 | AT1G28550.1 | 43.779 | 217 | 112 | 4 | 7 | 216 | 5 | 218 | 1.26e-53 | 171 |
| Msa1385730 | AT1G05810.1 | 40.191 | 209 | 119 | 3 | 13 | 216 | 10 | 217 | 3.52e-53 | 170 |
| Msa1385730 | AT1G06400.1 | 43.256 | 215 | 110 | 4 | 7 | 214 | 5 | 214 | 8.08e-53 | 169 |
| Msa1385730 | AT1G05810.2 | 40.191 | 209 | 119 | 3 | 13 | 216 | 56 | 263 | 1.16e-52 | 170 |
| Msa1385730 | AT1G01200.1 | 47.337 | 169 | 89 | 0 | 13 | 181 | 26 | 194 | 1.22e-52 | 169 |
| Msa1385730 | AT5G47960.1 | 41.706 | 211 | 115 | 3 | 13 | 216 | 13 | 222 | 3.15e-52 | 168 |
| Msa1385730 | AT2G31680.1 | 47.879 | 165 | 85 | 1 | 13 | 177 | 10 | 173 | 3.51e-52 | 168 |
| Msa1385730 | AT5G03530.2 | 45.024 | 211 | 105 | 6 | 8 | 214 | 6 | 209 | 8.02e-52 | 166 |
| Msa1385730 | AT5G03530.1 | 45.024 | 211 | 105 | 6 | 8 | 214 | 6 | 209 | 8.02e-52 | 166 |
| Msa1385730 | AT1G43890.3 | 50.898 | 167 | 78 | 4 | 6 | 170 | 4 | 168 | 1.02e-51 | 166 |
| Msa1385730 | AT1G43890.1 | 50.898 | 167 | 78 | 4 | 6 | 170 | 4 | 168 | 1.02e-51 | 166 |
| Msa1385730 | AT1G43890.2 | 50.898 | 167 | 78 | 4 | 6 | 170 | 4 | 168 | 1.02e-51 | 166 |
| Msa1385730 | AT5G65270.1 | 40.376 | 213 | 117 | 4 | 13 | 216 | 15 | 226 | 1.28e-51 | 166 |
| Msa1385730 | AT1G73640.1 | 46.114 | 193 | 99 | 2 | 13 | 201 | 11 | 202 | 2.58e-51 | 166 |
| Msa1385730 | AT3G12160.1 | 41.315 | 213 | 110 | 4 | 13 | 215 | 13 | 220 | 5.13e-51 | 165 |
| Msa1385730 | AT1G18200.1 | 50.296 | 169 | 83 | 1 | 13 | 181 | 11 | 178 | 2.31e-50 | 163 |
| Msa1385730 | AT3G54840.1 | 44.382 | 178 | 94 | 3 | 3 | 179 | 24 | 197 | 2.41e-47 | 155 |
| Msa1385730 | AT3G54840.2 | 46.154 | 169 | 86 | 3 | 3 | 170 | 24 | 188 | 6.27e-47 | 153 |
| Msa1385730 | AT3G54840.3 | 45.399 | 163 | 87 | 2 | 18 | 179 | 2 | 163 | 2.65e-46 | 151 |
| Msa1385730 | AT4G35860.2 | 46.667 | 165 | 81 | 4 | 57 | 215 | 2 | 165 | 1.73e-44 | 146 |
| Msa1385730 | AT3G09910.5 | 45.312 | 192 | 101 | 4 | 8 | 197 | 6 | 195 | 2.91e-44 | 147 |
| Msa1385730 | AT3G09910.4 | 45.312 | 192 | 101 | 4 | 8 | 197 | 6 | 195 | 2.91e-44 | 147 |
| Msa1385730 | AT4G19640.1 | 38.191 | 199 | 113 | 4 | 17 | 215 | 12 | 200 | 4.47e-43 | 144 |
| Msa1385730 | AT3G09910.3 | 47.126 | 174 | 88 | 4 | 8 | 179 | 6 | 177 | 5.34e-42 | 141 |
| Msa1385730 | AT3G09910.1 | 47.126 | 174 | 88 | 4 | 8 | 179 | 6 | 177 | 5.34e-42 | 141 |
| Msa1385730 | AT3G09910.2 | 47.126 | 174 | 88 | 4 | 8 | 179 | 6 | 177 | 5.34e-42 | 141 |
| Msa1385730 | AT3G18820.1 | 39.109 | 202 | 112 | 5 | 5 | 200 | 2 | 198 | 3.06e-41 | 139 |
| Msa1385730 | AT4G39890.1 | 43.396 | 159 | 88 | 2 | 17 | 174 | 11 | 168 | 6.36e-41 | 139 |
| Msa1385730 | AT5G45130.1 | 36.683 | 199 | 116 | 5 | 17 | 215 | 12 | 200 | 9.86e-41 | 138 |
| Msa1385730 | AT2G22290.1 | 37.186 | 199 | 120 | 4 | 17 | 214 | 11 | 205 | 2.50e-40 | 137 |
| Msa1385730 | AT2G44610.1 | 36.667 | 210 | 127 | 3 | 5 | 214 | 3 | 206 | 5.42e-40 | 136 |
| Msa1385730 | AT5G10260.1 | 36.364 | 198 | 124 | 2 | 17 | 214 | 11 | 206 | 3.52e-39 | 134 |
| Msa1385730 | AT5G45130.2 | 36.041 | 197 | 116 | 5 | 19 | 215 | 22 | 208 | 6.41e-39 | 133 |
| Msa1385730 | AT1G22740.1 | 38.579 | 197 | 113 | 4 | 15 | 205 | 8 | 202 | 3.89e-38 | 131 |
| Msa1385730 | AT5G64990.1 | 37.374 | 198 | 121 | 3 | 17 | 213 | 9 | 204 | 8.97e-38 | 130 |
| Msa1385730 | AT1G52280.1 | 41.667 | 168 | 92 | 3 | 15 | 176 | 8 | 175 | 9.17e-38 | 130 |
| Msa1385730 | AT4G09720.1 | 38.191 | 199 | 114 | 4 | 15 | 205 | 8 | 205 | 1.10e-37 | 130 |
| Msa1385730 | AT5G59150.2 | 48.760 | 121 | 61 | 1 | 57 | 177 | 3 | 122 | 1.32e-37 | 129 |
| Msa1385730 | AT1G49300.2 | 36.058 | 208 | 120 | 6 | 5 | 204 | 2 | 204 | 1.35e-37 | 130 |
| Msa1385730 | AT1G49300.1 | 36.058 | 208 | 120 | 6 | 5 | 204 | 2 | 204 | 1.35e-37 | 130 |
| Msa1385730 | AT3G16100.1 | 37.864 | 206 | 113 | 4 | 15 | 214 | 8 | 204 | 4.87e-37 | 129 |
| Msa1385730 | AT4G09720.4 | 37.745 | 204 | 113 | 5 | 15 | 205 | 8 | 210 | 6.69e-36 | 125 |
| Msa1385730 | AT2G21880.1 | 36.058 | 208 | 111 | 4 | 15 | 205 | 9 | 211 | 1.06e-35 | 125 |
| Msa1385730 | AT5G64990.2 | 36.098 | 205 | 121 | 4 | 17 | 213 | 9 | 211 | 4.11e-35 | 124 |
| Msa1385730 | AT4G09720.3 | 35.238 | 210 | 116 | 4 | 15 | 205 | 8 | 216 | 1.60e-34 | 122 |
| Msa1385730 | AT5G39620.1 | 38.462 | 169 | 92 | 3 | 16 | 175 | 6 | 171 | 9.44e-34 | 120 |
| Msa1385730 | AT4G19640.2 | 38.843 | 121 | 74 | 0 | 17 | 137 | 12 | 132 | 7.21e-30 | 108 |
| Msa1385730 | AT4G19640.3 | 38.843 | 121 | 74 | 0 | 17 | 137 | 12 | 132 | 4.70e-29 | 107 |
| Msa1385730 | AT4G09720.6 | 38.235 | 170 | 96 | 4 | 44 | 205 | 3 | 171 | 1.18e-28 | 106 |
| Msa1385730 | AT4G09720.5 | 38.235 | 170 | 96 | 4 | 44 | 205 | 3 | 171 | 1.18e-28 | 106 |
| Msa1385730 | AT4G09720.2 | 38.235 | 170 | 96 | 4 | 44 | 205 | 3 | 171 | 1.18e-28 | 106 |
| Msa1385730 | AT2G21880.4 | 35.519 | 183 | 96 | 4 | 40 | 205 | 9 | 186 | 1.51e-27 | 103 |
| Msa1385730 | AT2G21880.3 | 35.519 | 183 | 96 | 4 | 40 | 205 | 9 | 186 | 1.51e-27 | 103 |
| Msa1385730 | AT4G35020.1 | 35.928 | 167 | 94 | 6 | 15 | 170 | 6 | 170 | 8.45e-27 | 102 |
| Msa1385730 | AT4G35020.2 | 35.928 | 167 | 94 | 6 | 15 | 170 | 6 | 170 | 8.45e-27 | 102 |
| Msa1385730 | AT4G35020.3 | 35.928 | 167 | 94 | 6 | 15 | 170 | 6 | 170 | 8.45e-27 | 102 |
| Msa1385730 | AT2G21880.2 | 32.212 | 208 | 111 | 5 | 15 | 205 | 9 | 203 | 7.35e-26 | 99.8 |
| Msa1385730 | AT2G44690.1 | 32.335 | 167 | 100 | 5 | 15 | 170 | 18 | 182 | 9.19e-26 | 99.8 |
| Msa1385730 | AT5G20010.1 | 28.972 | 214 | 142 | 6 | 3 | 212 | 2 | 209 | 1.21e-25 | 99.8 |
| Msa1385730 | AT3G48040.1 | 32.934 | 167 | 99 | 5 | 15 | 170 | 8 | 172 | 1.42e-25 | 99.4 |
| Msa1385730 | AT5G45970.1 | 31.138 | 167 | 102 | 5 | 15 | 170 | 6 | 170 | 3.74e-25 | 97.8 |
| Msa1385730 | AT5G62880.1 | 31.844 | 179 | 109 | 5 | 15 | 182 | 8 | 184 | 4.31e-25 | 98.2 |
| Msa1385730 | AT5G55080.1 | 32.716 | 162 | 105 | 3 | 16 | 177 | 14 | 171 | 7.69e-25 | 97.8 |
| Msa1385730 | AT3G51300.1 | 32.335 | 167 | 100 | 6 | 15 | 170 | 6 | 170 | 1.18e-24 | 96.7 |
| Msa1385730 | AT1G20090.1 | 34.132 | 167 | 97 | 6 | 15 | 170 | 5 | 169 | 1.51e-24 | 96.3 |
| Msa1385730 | AT1G75840.1 | 33.533 | 167 | 98 | 6 | 15 | 170 | 6 | 170 | 1.96e-24 | 95.9 |
| Msa1385730 | AT5G55190.1 | 30.286 | 175 | 117 | 4 | 3 | 177 | 2 | 171 | 3.82e-24 | 95.9 |
| Msa1385730 | AT5G20020.1 | 30.286 | 175 | 117 | 4 | 3 | 177 | 2 | 171 | 5.35e-24 | 95.5 |
| Msa1385730 | AT2G17800.2 | 32.934 | 167 | 99 | 6 | 15 | 170 | 6 | 170 | 5.78e-24 | 94.7 |
| Msa1385730 | AT2G17800.1 | 32.934 | 167 | 99 | 6 | 15 | 170 | 6 | 170 | 5.78e-24 | 94.7 |
| Msa1385730 | AT4G28950.1 | 31.515 | 165 | 102 | 5 | 15 | 170 | 6 | 168 | 1.75e-23 | 94.0 |
| Msa1385730 | AT4G35950.1 | 32.335 | 167 | 100 | 6 | 15 | 170 | 6 | 170 | 4.13e-23 | 92.4 |
| Msa1385730 | AT3G48040.2 | 32.075 | 159 | 95 | 5 | 15 | 162 | 8 | 164 | 5.88e-23 | 91.7 |
| Msa1385730 | AT5G62880.2 | 32.075 | 159 | 95 | 5 | 15 | 162 | 8 | 164 | 5.92e-22 | 89.4 |
| Msa1385730 | AT4G35020.4 | 36.207 | 116 | 71 | 3 | 15 | 129 | 6 | 119 | 8.89e-19 | 79.7 |
| Msa1385730 | AT4G35020.5 | 36.207 | 116 | 71 | 3 | 15 | 129 | 6 | 119 | 8.89e-19 | 79.7 |
| Msa1385730 | AT5G46025.1 | 35.294 | 102 | 64 | 2 | 77 | 177 | 6 | 106 | 1.55e-15 | 70.5 |
| Msa1385730 | AT3G51290.2 | 30.769 | 143 | 86 | 6 | 44 | 175 | 636 | 776 | 7.77e-13 | 67.4 |
| Msa1385730 | AT5G37680.1 | 27.215 | 158 | 108 | 3 | 16 | 170 | 20 | 173 | 4.17e-12 | 62.8 |
| Msa1385730 | AT2G15310.1 | 28.058 | 139 | 88 | 6 | 16 | 153 | 18 | 145 | 1.37e-11 | 62.0 |
Find 91 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCACTCAGATTCAGTTATT+TGG | 0.114215 | tig0020776:+22037 | None:intergenic |
| CACGGTGTGGTTAACATTTA+TGG | 0.143277 | tig0020776:-22065 | Msa1385730:three_prime_UTR |
| CTCATTAAACTTCTCCTAAT+TGG | 0.159282 | tig0020776:-24497 | Msa1385730:CDS |
| GTTCCTGCTTTAAGCCTTAT+TGG | 0.168990 | tig0020776:+22110 | None:intergenic |
| AGCGAATCAAATTGCAAATA+TGG | 0.180362 | tig0020776:-24136 | Msa1385730:CDS |
| CACACATTCATTCTTGAGTT+TGG | 0.211920 | tig0020776:-21982 | Msa1385730:three_prime_UTR |
| TTAGGCTGTGCCAACTTCTA+AGG | 0.253740 | tig0020776:-22870 | Msa1385730:intron |
| CTGCATGTTGTGGTTCTTAA+TGG | 0.257090 | tig0020776:-22347 | Msa1385730:exon |
| TCAGCATTGATTTCAAAATA+AGG | 0.261517 | tig0020776:-24178 | Msa1385730:intron |
| GTTGGTTAATCTTGATTGTC+TGG | 0.270643 | tig0020776:+22409 | None:intergenic |
| TTCCTTTCTTGAAGCCAATA+AGG | 0.303057 | tig0020776:-22124 | Msa1385730:three_prime_UTR |
| TCACTAGTTGAGCGTTGAAT+TGG | 0.317922 | tig0020776:+24822 | None:intergenic |
| TGACAATGTTAACAAGATAT+TGG | 0.321340 | tig0020776:-23033 | Msa1385730:CDS |
| TCACTCAGATTCAGTTATTT+GGG | 0.335202 | tig0020776:+22038 | None:intergenic |
| TCATCTCATGTCCAGATATC+AGG | 0.336735 | tig0020776:-23088 | Msa1385730:intron |
| TGGTCAAGGAACTTATGATA+TGG | 0.358979 | tig0020776:-21848 | Msa1385730:three_prime_UTR |
| CAAGCGCTTGCAGATGAATA+TGG | 0.360715 | tig0020776:-22845 | Msa1385730:CDS |
| CACTAGTTGAGCGTTGAATT+GGG | 0.367061 | tig0020776:+24823 | None:intergenic |
| CCTGGGCAGCCCCTGCTCCC+TGG | 0.373973 | tig0020776:+22382 | None:intergenic |
| ACCACACCATACTTGGCTTA+TGG | 0.376966 | tig0020776:-22089 | Msa1385730:three_prime_UTR |
| TGGTACCGCTATCACCAATT+AGG | 0.378492 | tig0020776:+24483 | None:intergenic |
| AGCAGGAACCACACCATACT+TGG | 0.381808 | tig0020776:-22096 | Msa1385730:three_prime_UTR |
| GCAGCCCCTGCTCCCTGGTC+TGG | 0.385231 | tig0020776:+22387 | None:intergenic |
| AGGAAAGTTAAGATCTAAAC+AGG | 0.396767 | tig0020776:+24741 | None:intergenic |
| TTGGTTAATCTTGATTGTCT+GGG | 0.400239 | tig0020776:+22410 | None:intergenic |
| ATAAGGACAATTGAGCTTGA+TGG | 0.403140 | tig0020776:-24161 | Msa1385730:CDS |
| CCAGGGAGCAGGGGCTGCCC+AGG | 0.406408 | tig0020776:-22382 | Msa1385730:CDS |
| CATGTCCAGATATCAGGAAT+TGG | 0.411917 | tig0020776:-23082 | Msa1385730:intron |
| TCGGACACTCGCAGAGGAAT+AGG | 0.419201 | tig0020776:-24576 | Msa1385730:intron |
| GCGAATCAAATTGCAAATAT+GGG | 0.419547 | tig0020776:-24135 | Msa1385730:CDS |
| AGCCTTATTGGCTTCAAGAA+AGG | 0.428738 | tig0020776:+22122 | None:intergenic |
| CCGTGACCATAAGCCAAGTA+TGG | 0.430523 | tig0020776:+22083 | None:intergenic |
| ATCGTAATCAGCACGAGCTC+TGG | 0.430906 | tig0020776:+24523 | None:intergenic |
| CATAATTAATTTCCCAACAT+AGG | 0.431227 | tig0020776:+22203 | None:intergenic |
| CCCCTGCTCCCTGGTCTGGT+TGG | 0.433352 | tig0020776:+22391 | None:intergenic |
| CGATTTCGAACTATCACAAC+TGG | 0.433779 | tig0020776:-24095 | Msa1385730:intron |
| AGAGAAAAGGAAAGAAAAGA+GGG | 0.437595 | tig0020776:+24776 | None:intergenic |
| GAGAGAAAAGGAAAGAAAAG+AGG | 0.440554 | tig0020776:+24775 | None:intergenic |
| AGAATGAATGTGTGGATGTC+TGG | 0.447349 | tig0020776:+21991 | None:intergenic |
| TGCATGTTGTGGTTCTTAAT+GGG | 0.450982 | tig0020776:-22346 | Msa1385730:exon |
| GCCTATGTTTATTTCTGCTG+TGG | 0.464643 | tig0020776:-21908 | Msa1385730:three_prime_UTR |
| GAAAACGAGAAAGAGAGAAA+AGG | 0.470733 | tig0020776:+24763 | None:intergenic |
| GTTCTTAATGGGAAGCTTGA+GGG | 0.477784 | tig0020776:-22335 | Msa1385730:exon |
| TTTACTTGTATATGACGTTA+CGG | 0.479177 | tig0020776:-23331 | Msa1385730:CDS |
| TCATATCATATTAATTAAAA+CGG | 0.479699 | tig0020776:+21799 | None:intergenic |
| ATAATTAATTTCCCAACATA+GGG | 0.480029 | tig0020776:+22204 | None:intergenic |
| TTCCTCTTCCTCATCTTCAC+AGG | 0.480337 | tig0020776:-24723 | Msa1385730:intron |
| AGTTCGAAATCGCTCTTGAC+CGG | 0.481009 | tig0020776:+24106 | None:intergenic |
| AACCAACCAGACCAGGGAGC+AGG | 0.489253 | tig0020776:-22393 | Msa1385730:CDS |
| TGCTACTCATTGGGTTGGAA+TGG | 0.494378 | tig0020776:-22235 | Msa1385730:three_prime_UTR |
| ACAGTTGCTACTCATTGGGT+TGG | 0.505420 | tig0020776:-22240 | Msa1385730:three_prime_UTR |
| CATATTCATCTGCAAGCGCT+TGG | 0.507439 | tig0020776:+22846 | None:intergenic |
| CAAGATTAACCAACCAGACC+AGG | 0.511143 | tig0020776:-22400 | Msa1385730:CDS |
| TACCTGTGAAGATGAGGAAG+AGG | 0.514002 | tig0020776:+24721 | None:intergenic |
| AGCGCTTGGCCCTTAGAAGT+TGG | 0.514221 | tig0020776:+22860 | None:intergenic |
| AGCTTACTACCGTGGAGCCA+TGG | 0.521985 | tig0020776:-23358 | Msa1385730:CDS |
| TCTTGAGTTTGGAGTTTCAA+AGG | 0.522996 | tig0020776:-21971 | Msa1385730:three_prime_UTR |
| TAGGCTGTGCCAACTTCTAA+GGG | 0.524551 | tig0020776:-22869 | Msa1385730:CDS |
| AGAATGAAAAGAAGAATCAA+AGG | 0.526724 | tig0020776:-24883 | Msa1385730:five_prime_UTR |
| AACAAATCTGAATGTGGAGG+AGG | 0.528959 | tig0020776:-22707 | Msa1385730:CDS |
| CTGACATGGATGAAAGCAAA+CGG | 0.531518 | tig0020776:-22998 | Msa1385730:CDS |
| GCTTACTACCGTGGAGCCAT+GGG | 0.548016 | tig0020776:-23357 | Msa1385730:CDS |
| TGGAAATACCTGTGAAGATG+AGG | 0.548935 | tig0020776:+24715 | None:intergenic |
| TGACATGGATGAAAGCAAAC+GGG | 0.551245 | tig0020776:-22997 | Msa1385730:intron |
| AATGTTAACAAGATATTGGT+GGG | 0.552268 | tig0020776:-23029 | Msa1385730:CDS |
| TAATCAGCACGAGCTCTGGC+AGG | 0.555758 | tig0020776:+24527 | None:intergenic |
| CCATACTTGGCTTATGGTCA+CGG | 0.557303 | tig0020776:-22083 | Msa1385730:three_prime_UTR |
| ACCAACCAGACCAGGGAGCA+GGG | 0.559075 | tig0020776:-22392 | Msa1385730:CDS |
| GGTTCTTAATGGGAAGCTTG+AGG | 0.564712 | tig0020776:-22336 | Msa1385730:exon |
| TGGTTAATCTTGATTGTCTG+GGG | 0.566856 | tig0020776:+22411 | None:intergenic |
| CAATGTTAACAAGATATTGG+TGG | 0.567581 | tig0020776:-23030 | Msa1385730:CDS |
| ACTAGTTGAGCGTTGAATTG+GGG | 0.584990 | tig0020776:+24824 | None:intergenic |
| GAATGAAAAGAAGAATCAAA+GGG | 0.587691 | tig0020776:-24882 | Msa1385730:five_prime_UTR |
| AGTTTGGAGTTTCAAAGGCG+TGG | 0.595003 | tig0020776:-21966 | Msa1385730:three_prime_UTR |
| TCAGCACGAGCTCTGGCAGG+TGG | 0.599524 | tig0020776:+24530 | None:intergenic |
| GTAAAATACCCATGGCTCCA+CGG | 0.601071 | tig0020776:+23349 | None:intergenic |
| TTGCAAATATGGGACACAGC+CGG | 0.602143 | tig0020776:-24125 | Msa1385730:CDS |
| TGCTAAAACAAATCTGAATG+TGG | 0.604329 | tig0020776:-22713 | Msa1385730:CDS |
| AAGCCAATAAGGCTTAAAGC+AGG | 0.605417 | tig0020776:-22113 | Msa1385730:three_prime_UTR |
| CTTCTCCTAATTGGTGATAG+CGG | 0.620219 | tig0020776:-24488 | Msa1385730:intron |
| CCAACCAGACCAGGGAGCAG+GGG | 0.621818 | tig0020776:-22391 | Msa1385730:CDS |
| GGTGGGCAACAAAGCTGACA+TGG | 0.624736 | tig0020776:-23012 | Msa1385730:CDS |
| AGATACTGACTCAAAATCTG+AGG | 0.634590 | tig0020776:-22644 | Msa1385730:intron |
| ATATACAAGTAAAATACCCA+TGG | 0.634609 | tig0020776:+23341 | None:intergenic |
| TAAAACAAATCTGAATGTGG+AGG | 0.641771 | tig0020776:-22710 | Msa1385730:CDS |
| ACCACAGCAGAAATAAACAT+AGG | 0.642974 | tig0020776:+21907 | None:intergenic |
| ACCATAAGCCAAGTATGGTG+TGG | 0.653928 | tig0020776:+22088 | None:intergenic |
| CAAACTCAAGAATGAATGTG+TGG | 0.658578 | tig0020776:+21983 | None:intergenic |
| CTTGGCTTATGGTCACGGTG+TGG | 0.658669 | tig0020776:-22078 | Msa1385730:three_prime_UTR |
| AAGATTAACCAACCAGACCA+GGG | 0.666777 | tig0020776:-22399 | Msa1385730:CDS |
| GTGGATGTCTGGCATCAATG+TGG | 0.721252 | tig0020776:+22002 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAAAAAAAAAGTC+GGG | + | tig0020776:24094-24113 | None:intergenic | 10.0% |
| !! | GTTAAAAAAAAAAAAAAAGT+CGG | + | tig0020776:24095-24114 | None:intergenic | 10.0% |
| !! | TCATATCATATTAATTAAAA+CGG | + | tig0020776:24877-24896 | None:intergenic | 10.0% |
| !! | GATTGTAATTAATTAATGAT+CGG | - | tig0020776:22078-22097 | Msa1385730:three_prime_UTR | 15.0% |
| !! | TAATATTACAATAACAACAA+AGG | + | tig0020776:23185-23204 | None:intergenic | 15.0% |
| !! | ATTTACATATACAAAATCAT+AGG | + | tig0020776:23258-23277 | None:intergenic | 15.0% |
| !! | AAAGATGCAATTATAAAAAA+GGG | + | tig0020776:24117-24136 | None:intergenic | 15.0% |
| !! | CCAAACATAGAAAATAAAAA+TGG | + | tig0020776:22213-22232 | None:intergenic | 20.0% |
| !!! | CCATTTTTATTTTCTATGTT+TGG | - | tig0020776:22210-22229 | Msa1385730:three_prime_UTR | 20.0% |
| !!! | TTATTTTCTATGTTTGGTAA+TGG | - | tig0020776:22216-22235 | Msa1385730:three_prime_UTR | 20.0% |
| !!! | GATTATGCTATTTTTCATAT+TGG | - | tig0020776:22313-22332 | Msa1385730:three_prime_UTR | 20.0% |
| !! | GAATTTAAGGATAATAAAAG+AGG | + | tig0020776:23428-23447 | None:intergenic | 20.0% |
| !! | TACGAAGATATTACAATTTA+AGG | + | tig0020776:23457-23476 | None:intergenic | 20.0% |
| !!! | TTTTATGTACTTATATGCAT+TGG | - | tig0020776:23737-23756 | Msa1385730:intron | 20.0% |
| !! | TTTATGTACTTATATGCATT+GGG | - | tig0020776:23738-23757 | Msa1385730:intron | 20.0% |
| !! | AATCAATGATAACTAGTAAA+AGG | + | tig0020776:24067-24086 | None:intergenic | 20.0% |
| !! | GAAAGATGCAATTATAAAAA+AGG | + | tig0020776:24118-24137 | None:intergenic | 20.0% |
| !!! | TTTTATAATTGCATCTTTCA+CGG | - | tig0020776:24119-24138 | Msa1385730:CDS | 20.0% |
| !! | ATAATTAATTTCCCAACATA+GGG | + | tig0020776:24472-24491 | None:intergenic | 20.0% |
| !!! | AACTCTTAATTTTGTCATTT+TGG | + | tig0020776:24742-24761 | None:intergenic | 20.0% |
| ! | AGAATGAAAAGAAGAATCAA+AGG | - | tig0020776:21790-21809 | Msa1385730:three_prime_UTR | 25.0% |
| ! | GAATGAAAAGAAGAATCAAA+GGG | - | tig0020776:21791-21810 | Msa1385730:three_prime_UTR | 25.0% |
| ! | TCAATAAATGAAGAGAAAAG+TGG | + | tig0020776:21981-22000 | None:intergenic | 25.0% |
| ! | TTGTGCAATCATGTAATATT+TGG | - | tig0020776:22423-22442 | Msa1385730:intron | 25.0% |
| ! | GACATCACAAAAGAATAAAA+CGG | + | tig0020776:22451-22470 | None:intergenic | 25.0% |
| !!! | TCAGCATTGATTTCAAAATA+AGG | - | tig0020776:22495-22514 | Msa1385730:intron | 25.0% |
| ! | AACATAGTGTAAAACATTAC+AGG | + | tig0020776:22648-22667 | None:intergenic | 25.0% |
| !! | GTAATGTTTTACACTATGTT+TGG | - | tig0020776:22648-22667 | Msa1385730:CDS | 25.0% |
| ! | TATTAGAGAAACTTCTTTCA+TGG | - | tig0020776:23078-23097 | Msa1385730:intron | 25.0% |
| ! | ATATACAAGTAAAATACCCA+TGG | + | tig0020776:23335-23354 | None:intergenic | 25.0% |
| ! | TTTACTTGTATATGACGTTA+CGG | - | tig0020776:23342-23361 | Msa1385730:CDS | 25.0% |
| ! | TAAGGATAATAAAAGAGGAA+TGG | + | tig0020776:23423-23442 | None:intergenic | 25.0% |
| ! | TTTAAGGAAACACGAATTTA+AGG | + | tig0020776:23441-23460 | None:intergenic | 25.0% |
| ! | TAATTGTGTTCACTGTATAA+TGG | + | tig0020776:23486-23505 | None:intergenic | 25.0% |
| ! | TGACAATGTTAACAAGATAT+TGG | - | tig0020776:23640-23659 | Msa1385730:intron | 25.0% |
| ! | AATGTTAACAAGATATTGGT+GGG | - | tig0020776:23644-23663 | Msa1385730:intron | 25.0% |
| !!! | CAAAATCTGAGGTTTTATTT+TGG | - | tig0020776:24040-24059 | Msa1385730:intron | 25.0% |
| !! | GAGTGATTTTTGTTAAACTT+AGG | + | tig0020776:24185-24204 | None:intergenic | 25.0% |
| ! | CATAATTAATTTCCCAACAT+AGG | + | tig0020776:24473-24492 | None:intergenic | 25.0% |
| !! | AAACTGAGAAATAACTTTTG+TGG | - | tig0020776:24805-24824 | Msa1385730:five_prime_UTR | 25.0% |
| AGAGAAAAGGAAAGAAAAGA+GGG | + | tig0020776:21900-21919 | None:intergenic | 30.0% | |
| AGGAAAGTTAAGATCTAAAC+AGG | + | tig0020776:21935-21954 | None:intergenic | 30.0% | |
| !!! | ATAGGTTTTGTTTGTTTCGA+TGG | - | tig0020776:22115-22134 | Msa1385730:three_prime_UTR | 30.0% |
| CTCATTAAACTTCTCCTAAT+TGG | - | tig0020776:22176-22195 | Msa1385730:three_prime_UTR | 30.0% | |
| !! | GTTTGATTTTGTGAAAGCTA+CGG | + | tig0020776:22271-22290 | None:intergenic | 30.0% |
| CAAACAAGTACTTAGTACTT+TGG | - | tig0020776:22286-22305 | Msa1385730:three_prime_UTR | 30.0% | |
| !!! | ATGCTATTTTTCATATTGGC+AGG | - | tig0020776:22317-22336 | Msa1385730:three_prime_UTR | 30.0% |
| ! | TTTTATTGCGTTTCTCTGAT+GGG | - | tig0020776:22357-22376 | Msa1385730:CDS | 30.0% |
| !!! | ACTAGTTTTATCACAACCAT+TGG | - | tig0020776:22389-22408 | Msa1385730:CDS | 30.0% |
| !!! | CTAGTTTTATCACAACCATT+GGG | - | tig0020776:22390-22409 | Msa1385730:CDS | 30.0% |
| AGCGAATCAAATTGCAAATA+TGG | - | tig0020776:22537-22556 | Msa1385730:intron | 30.0% | |
| GCGAATCAAATTGCAAATAT+GGG | - | tig0020776:22538-22557 | Msa1385730:intron | 30.0% | |
| !! | TTCTAGCTTCACAAAAATCA+TGG | + | tig0020776:22717-22736 | None:intergenic | 30.0% |
| ! | ATTTTTGTGAAGCTAGAAGT+TGG | - | tig0020776:22719-22738 | Msa1385730:intron | 30.0% |
| ! | ACACAAATTCGTCCATTTTA+TGG | - | tig0020776:22755-22774 | Msa1385730:intron | 30.0% |
| ! | CACAAATTCGTCCATTTTAT+GGG | - | tig0020776:22756-22775 | Msa1385730:intron | 30.0% |
| TGTTTAACGTAAGAGAGAAT+GGG | + | tig0020776:23400-23419 | None:intergenic | 30.0% | |
| CAATGTTAACAAGATATTGG+TGG | - | tig0020776:23643-23662 | Msa1385730:intron | 30.0% | |
| TCATTCTCATTCATACTTGT+TGG | - | tig0020776:23710-23729 | Msa1385730:intron | 30.0% | |
| TGCTAAAACAAATCTGAATG+TGG | - | tig0020776:23960-23979 | Msa1385730:intron | 30.0% | |
| TAAAACAAATCTGAATGTGG+AGG | - | tig0020776:23963-23982 | Msa1385730:intron | 30.0% | |
| ! | AGGTTTTCTTTTCAATAGCT+CGG | - | tig0020776:23986-24005 | Msa1385730:intron | 30.0% |
| TTTGTTAAACTTAGGATGCA+AGG | + | tig0020776:24177-24196 | None:intergenic | 30.0% | |
| GTTTAACAAAAATCACTCTC+CGG | - | tig0020776:24187-24206 | Msa1385730:intron | 30.0% | |
| TTTAACAAAAATCACTCTCC+GGG | - | tig0020776:24188-24207 | Msa1385730:intron | 30.0% | |
| ACAAAATGGAAAACTTAGCA+TGG | + | tig0020776:24233-24252 | None:intergenic | 30.0% | |
| TTGGTTAATCTTGATTGTCT+GGG | + | tig0020776:24266-24285 | None:intergenic | 30.0% | |
| ! | TTTTACAGTTGCTACTCATT+GGG | - | tig0020776:24429-24448 | Msa1385730:intron | 30.0% |
| TCACTCAGATTCAGTTATTT+GGG | + | tig0020776:24638-24657 | None:intergenic | 30.0% | |
| ! | AGAAATAACTTTTGTGGTCA+AGG | - | tig0020776:24811-24830 | Msa1385730:five_prime_UTR | 30.0% |
| GAGAGAAAAGGAAAGAAAAG+AGG | + | tig0020776:21901-21920 | None:intergenic | 35.0% | |
| GAAAACGAGAAAGAGAGAAA+AGG | + | tig0020776:21913-21932 | None:intergenic | 35.0% | |
| ! | TTTTTCATATTGGCAGGTGT+TGG | - | tig0020776:22323-22342 | Msa1385730:three_prime_UTR | 35.0% |
| ! | CTTTTATTGCGTTTCTCTGA+TGG | - | tig0020776:22356-22375 | Msa1385730:CDS | 35.0% |
| ! | TTTTATCACAACCATTGGGT+AGG | - | tig0020776:22394-22413 | Msa1385730:CDS | 35.0% |
| ATAAGGACAATTGAGCTTGA+TGG | - | tig0020776:22512-22531 | Msa1385730:intron | 35.0% | |
| ATCCAAACAAGCCCATAAAA+TGG | + | tig0020776:22770-22789 | None:intergenic | 35.0% | |
| CGCTTATATAAGCTTGCATA+AGG | - | tig0020776:22833-22852 | Msa1385730:CDS | 35.0% | |
| ! | TGGTTTGAGTTTCCATTTAG+CGG | - | tig0020776:23098-23117 | Msa1385730:intron | 35.0% |
| ! | ATGTAACTGATTCCACCTAA+TGG | - | tig0020776:23153-23172 | Msa1385730:intron | 35.0% |
| GTTTAACGTAAGAGAGAATG+GGG | + | tig0020776:23399-23418 | None:intergenic | 35.0% | |
| GTGTTTAACGTAAGAGAGAA+TGG | + | tig0020776:23401-23420 | None:intergenic | 35.0% | |
| !! | AAGCATTGAAAGCCAATTGT+CGG | + | tig0020776:23523-23542 | None:intergenic | 35.0% |
| AAGCGCTATTACATGACAAT+AGG | - | tig0020776:23555-23574 | Msa1385730:intron | 35.0% | |
| AGTATGAATGAGAATGAGAG+AGG | + | tig0020776:23707-23726 | None:intergenic | 35.0% | |
| TATCCATCAATGTTCCCTTT+AGG | - | tig0020776:23785-23804 | Msa1385730:intron | 35.0% | |
| !!! | TTTGTTTTAGCACTCTGTAC+AGG | + | tig0020776:23952-23971 | None:intergenic | 35.0% |
| ! | GGTTTTCTTTTCAATAGCTC+GGG | - | tig0020776:23987-24006 | Msa1385730:intron | 35.0% |
| !! | AGATACTGACTCAAAATCTG+AGG | - | tig0020776:24029-24048 | Msa1385730:intron | 35.0% |
| TGGTTAATCTTGATTGTCTG+GGG | + | tig0020776:24265-24284 | None:intergenic | 35.0% | |
| GTTGGTTAATCTTGATTGTC+TGG | + | tig0020776:24267-24286 | None:intergenic | 35.0% | |
| ! | ACCACAACATGCAGATTTTT+GGG | + | tig0020776:24320-24339 | None:intergenic | 35.0% |
| ! | AACCACAACATGCAGATTTT+TGG | + | tig0020776:24321-24340 | None:intergenic | 35.0% |
| TGCATGTTGTGGTTCTTAAT+GGG | - | tig0020776:24327-24346 | Msa1385730:CDS | 35.0% | |
| ! | GTTTTACAGTTGCTACTCAT+TGG | - | tig0020776:24428-24447 | Msa1385730:intron | 35.0% |
| ! | ATGGTAGATTTTCCCTATGT+TGG | - | tig0020776:24457-24476 | Msa1385730:intron | 35.0% |
| ! | TGGTAGATTTTCCCTATGTT+GGG | - | tig0020776:24458-24477 | Msa1385730:intron | 35.0% |
| !! | CTTAAACCCACTCTTTTTCA+GGG | - | tig0020776:24508-24527 | Msa1385730:CDS | 35.0% |
| !!! | TTAAACCCACTCTTTTTCAG+GGG | - | tig0020776:24509-24528 | Msa1385730:CDS | 35.0% |
| TTCCTTTCTTGAAGCCAATA+AGG | - | tig0020776:24549-24568 | Msa1385730:exon | 35.0% | |
| GTCACTCAGATTCAGTTATT+TGG | + | tig0020776:24639-24658 | None:intergenic | 35.0% | |
| CAAACTCAAGAATGAATGTG+TGG | + | tig0020776:24693-24712 | None:intergenic | 35.0% | |
| CACACATTCATTCTTGAGTT+TGG | - | tig0020776:24691-24710 | Msa1385730:intron | 35.0% | |
| ! | TCTTGAGTTTGGAGTTTCAA+AGG | - | tig0020776:24702-24721 | Msa1385730:intron | 35.0% |
| ACCACAGCAGAAATAAACAT+AGG | + | tig0020776:24769-24788 | None:intergenic | 35.0% | |
| TGGTCAAGGAACTTATGATA+TGG | - | tig0020776:24825-24844 | Msa1385730:five_prime_UTR | 35.0% | |
| ! | GGAACATTTTCTGCATGTTT+AGG | + | tig0020776:24856-24875 | None:intergenic | 35.0% |
| !! | ACTAGTTGAGCGTTGAATTG+GGG | + | tig0020776:21852-21871 | None:intergenic | 40.0% |
| !! | CACTAGTTGAGCGTTGAATT+GGG | + | tig0020776:21853-21872 | None:intergenic | 40.0% |
| !! | TCACTAGTTGAGCGTTGAAT+TGG | + | tig0020776:21854-21873 | None:intergenic | 40.0% |
| TGGAAATACCTGTGAAGATG+AGG | + | tig0020776:21961-21980 | None:intergenic | 40.0% | |
| ! | CTTCTCCTAATTGGTGATAG+CGG | - | tig0020776:22185-22204 | Msa1385730:three_prime_UTR | 40.0% |
| !! | GTTTGGTAATGGTATCACTC+TGG | - | tig0020776:22227-22246 | Msa1385730:three_prime_UTR | 40.0% |
| TTTGTGAAAGCTACGGAGTA+TGG | + | tig0020776:22264-22283 | None:intergenic | 40.0% | |
| CACAAAAGAAACCTACCCAA+TGG | + | tig0020776:22408-22427 | None:intergenic | 40.0% | |
| CGATTTCGAACTATCACAAC+TGG | - | tig0020776:22578-22597 | Msa1385730:intron | 40.0% | |
| GAACATTAGGACGTGAGAAA+TGG | + | tig0020776:22689-22708 | None:intergenic | 40.0% | |
| AATCATGGCCAGAGAACATT+AGG | + | tig0020776:22702-22721 | None:intergenic | 40.0% | |
| !! | GTCCATTTTATGGGCTTGTT+TGG | - | tig0020776:22765-22784 | Msa1385730:intron | 40.0% |
| GTCTAGTCACATGCTTAAAG+TGG | + | tig0020776:23002-23021 | None:intergenic | 40.0% | |
| ! | GGTTTGAGTTTCCATTTAGC+GGG | - | tig0020776:23099-23118 | Msa1385730:intron | 40.0% |
| ! | GTTTGAGTTTCCATTTAGCG+GGG | - | tig0020776:23100-23119 | Msa1385730:intron | 40.0% |
| ! | TTTGAGTTTCCATTTAGCGG+GGG | - | tig0020776:23101-23120 | Msa1385730:intron | 40.0% |
| CTGATTCCACCTAATGGAAA+AGG | - | tig0020776:23159-23178 | Msa1385730:intron | 40.0% | |
| ! | CAACAAAGGCCTTTTCCATT+AGG | + | tig0020776:23171-23190 | None:intergenic | 40.0% |
| TAACAGTTCAACCCGACAAT+TGG | - | tig0020776:23508-23527 | Msa1385730:intron | 40.0% | |
| ! | AGCATTGAAAGCCAATTGTC+GGG | + | tig0020776:23522-23541 | None:intergenic | 40.0% |
| TCATCTCATGTCCAGATATC+AGG | - | tig0020776:23585-23604 | Msa1385730:intron | 40.0% | |
| CATGTCCAGATATCAGGAAT+TGG | - | tig0020776:23591-23610 | Msa1385730:intron | 40.0% | |
| CGAATCCAATTCCTGATATC+TGG | + | tig0020776:23599-23618 | None:intergenic | 40.0% | |
| CTGACATGGATGAAAGCAAA+CGG | - | tig0020776:23675-23694 | Msa1385730:intron | 40.0% | |
| TGACATGGATGAAAGCAAAC+GGG | - | tig0020776:23676-23695 | Msa1385730:intron | 40.0% | |
| AACAAATCTGAATGTGGAGG+AGG | - | tig0020776:23966-23985 | Msa1385730:intron | 40.0% | |
| ACTGATGAGAGAATTCAACC+CGG | + | tig0020776:24209-24228 | None:intergenic | 40.0% | |
| AAGATTAACCAACCAGACCA+GGG | - | tig0020776:24274-24293 | Msa1385730:intron | 40.0% | |
| !! | ACAACATGCAGATTTTTGGG+CGG | + | tig0020776:24317-24336 | None:intergenic | 40.0% |
| CTGCATGTTGTGGTTCTTAA+TGG | - | tig0020776:24326-24345 | Msa1385730:CDS | 40.0% | |
| GTTCTTAATGGGAAGCTTGA+GGG | - | tig0020776:24338-24357 | Msa1385730:intron | 40.0% | |
| ! | GCTTAAACCCACTCTTTTTC+AGG | - | tig0020776:24507-24526 | Msa1385730:CDS | 40.0% |
| !! | AGCCTTATTGGCTTCAAGAA+AGG | + | tig0020776:24554-24573 | None:intergenic | 40.0% |
| AAGCCAATAAGGCTTAAAGC+AGG | - | tig0020776:24560-24579 | Msa1385730:exon | 40.0% | |
| ! | GTTCCTGCTTTAAGCCTTAT+TGG | + | tig0020776:24566-24585 | None:intergenic | 40.0% |
| CACGGTGTGGTTAACATTTA+TGG | - | tig0020776:24608-24627 | Msa1385730:intron | 40.0% | |
| AGAATGAATGTGTGGATGTC+TGG | + | tig0020776:24685-24704 | None:intergenic | 40.0% | |
| !! | GCCTATGTTTATTTCTGCTG+TGG | - | tig0020776:24765-24784 | Msa1385730:five_prime_UTR | 40.0% |
| TTCCTCTTCCTCATCTTCAC+AGG | - | tig0020776:21950-21969 | Msa1385730:three_prime_UTR | 45.0% | |
| TACCTGTGAAGATGAGGAAG+AGG | + | tig0020776:21955-21974 | None:intergenic | 45.0% | |
| TGGTACCGCTATCACCAATT+AGG | + | tig0020776:22193-22212 | None:intergenic | 45.0% | |
| TTGCAAATATGGGACACAGC+CGG | - | tig0020776:22548-22567 | Msa1385730:intron | 45.0% | |
| AGTTCGAAATCGCTCTTGAC+CGG | + | tig0020776:22570-22589 | None:intergenic | 45.0% | |
| TCTCACGTCCTAATGTTCTC+TGG | - | tig0020776:22691-22710 | Msa1385730:CDS | 45.0% | |
| TTGAGTTTCCATTTAGCGGG+GGG | - | tig0020776:23102-23121 | Msa1385730:intron | 45.0% | |
| ! | CAAAGGCCTTTTCCATTAGG+TGG | + | tig0020776:23168-23187 | None:intergenic | 45.0% |
| CGGTAGTAAGCTGCAAAAGA+AGG | + | tig0020776:23307-23326 | None:intergenic | 45.0% | |
| ! | TCTTTTGCAGCTTACTACCG+TGG | - | tig0020776:23307-23326 | Msa1385730:intron | 45.0% |
| GTAAAATACCCATGGCTCCA+CGG | + | tig0020776:23327-23346 | None:intergenic | 45.0% | |
| CAGCCTAAAGGGAACATTGA+TGG | + | tig0020776:23791-23810 | None:intergenic | 45.0% | |
| AGAAGTTGGCACAGCCTAAA+GGG | + | tig0020776:23802-23821 | None:intergenic | 45.0% | |
| TAGAAGTTGGCACAGCCTAA+AGG | + | tig0020776:23803-23822 | None:intergenic | 45.0% | |
| TTAGGCTGTGCCAACTTCTA+AGG | - | tig0020776:23803-23822 | Msa1385730:intron | 45.0% | |
| TAGGCTGTGCCAACTTCTAA+GGG | - | tig0020776:23804-23823 | Msa1385730:intron | 45.0% | |
| CATATTCATCTGCAAGCGCT+TGG | + | tig0020776:23830-23849 | None:intergenic | 45.0% | |
| CAAGCGCTTGCAGATGAATA+TGG | - | tig0020776:23828-23847 | Msa1385730:intron | 45.0% | |
| TGGGGCTGCAAAGAACAAAA+TGG | + | tig0020776:24247-24266 | None:intergenic | 45.0% | |
| CAAGATTAACCAACCAGACC+AGG | - | tig0020776:24273-24292 | Msa1385730:intron | 45.0% | |
| GCCCAAAAATCTGCATGTTG+TGG | - | tig0020776:24316-24335 | Msa1385730:CDS | 45.0% | |
| GGTTCTTAATGGGAAGCTTG+AGG | - | tig0020776:24337-24356 | Msa1385730:CDS | 45.0% | |
| ACAGTTGCTACTCATTGGGT+TGG | - | tig0020776:24433-24452 | Msa1385730:intron | 45.0% | |
| !! | TGCTACTCATTGGGTTGGAA+TGG | - | tig0020776:24438-24457 | Msa1385730:intron | 45.0% |
| ACCACACCATACTTGGCTTA+TGG | - | tig0020776:24584-24603 | Msa1385730:intron | 45.0% | |
| ACCATAAGCCAAGTATGGTG+TGG | + | tig0020776:24588-24607 | None:intergenic | 45.0% | |
| CCATACTTGGCTTATGGTCA+CGG | - | tig0020776:24590-24609 | Msa1385730:intron | 45.0% | |
| ! | AGTTTGGAGTTTCAAAGGCG+TGG | - | tig0020776:24707-24726 | Msa1385730:intron | 45.0% |
| !! | TATCTAATAATAATAATAAT+TGG | + | tig0020776:22019-22038 | None:intergenic | 5.0% |
| TAATGATCGGACACTCGCAG+AGG | - | tig0020776:22091-22110 | Msa1385730:three_prime_UTR | 50.0% | |
| ATCGTAATCAGCACGAGCTC+TGG | + | tig0020776:22153-22172 | None:intergenic | 50.0% | |
| CCAAGCCCCTGAAAAAGAGT+GGG | + | tig0020776:24517-24536 | None:intergenic | 50.0% | |
| ACCAAGCCCCTGAAAAAGAG+TGG | + | tig0020776:24518-24537 | None:intergenic | 50.0% | |
| AGCAGGAACCACACCATACT+TGG | - | tig0020776:24577-24596 | Msa1385730:intron | 50.0% | |
| CCGTGACCATAAGCCAAGTA+TGG | + | tig0020776:24593-24612 | None:intergenic | 50.0% | |
| GTGGATGTCTGGCATCAATG+TGG | + | tig0020776:24674-24693 | None:intergenic | 50.0% | |
| TCGGACACTCGCAGAGGAAT+AGG | - | tig0020776:22097-22116 | Msa1385730:three_prime_UTR | 55.0% | |
| ! | TAATCAGCACGAGCTCTGGC+AGG | + | tig0020776:22149-22168 | None:intergenic | 55.0% |
| ATGTCTTGCCCCCCGCTAAA+TGG | + | tig0020776:23113-23132 | None:intergenic | 55.0% | |
| AGCTTACTACCGTGGAGCCA+TGG | - | tig0020776:23315-23334 | Msa1385730:CDS | 55.0% | |
| GCTTACTACCGTGGAGCCAT+GGG | - | tig0020776:23316-23335 | Msa1385730:CDS | 55.0% | |
| GGTGGGCAACAAAGCTGACA+TGG | - | tig0020776:23661-23680 | Msa1385730:intron | 55.0% | |
| AGCGCTTGGCCCTTAGAAGT+TGG | + | tig0020776:23816-23835 | None:intergenic | 55.0% | |
| !! | TGCAGATTTTTGGGCGGCCT+GGG | + | tig0020776:24311-24330 | None:intergenic | 55.0% |
| !! | ATGCAGATTTTTGGGCGGCC+TGG | + | tig0020776:24312-24331 | None:intergenic | 55.0% |
| !!! | CCCACTCTTTTTCAGGGGCT+TGG | - | tig0020776:24514-24533 | Msa1385730:CDS | 55.0% |
| CTTGGCTTATGGTCACGGTG+TGG | - | tig0020776:24595-24614 | Msa1385730:intron | 55.0% | |
| AACCAACCAGACCAGGGAGC+AGG | - | tig0020776:24280-24299 | Msa1385730:intron | 60.0% | |
| ACCAACCAGACCAGGGAGCA+GGG | - | tig0020776:24281-24300 | Msa1385730:intron | 60.0% | |
| ! | TCAGCACGAGCTCTGGCAGG+TGG | + | tig0020776:22146-22165 | None:intergenic | 65.0% |
| CCAACCAGACCAGGGAGCAG+GGG | - | tig0020776:24282-24301 | Msa1385730:intron | 65.0% | |
| CCCCTGCTCCCTGGTCTGGT+TGG | + | tig0020776:24285-24304 | None:intergenic | 70.0% | |
| GCAGCCCCTGCTCCCTGGTC+TGG | + | tig0020776:24289-24308 | None:intergenic | 75.0% | |
| ! | CCTGGGCAGCCCCTGCTCCC+TGG | + | tig0020776:24294-24313 | None:intergenic | 80.0% |
| ! | CCAGGGAGCAGGGGCTGCCC+AGG | - | tig0020776:24291-24310 | Msa1385730:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020776 | gene | 21784 | 24911 | 21784 | ID=Msa1385730;Name=Msa1385730 |
| tig0020776 | mRNA | 21784 | 24911 | 21784 | ID=Msa1385730-mRNA-1;Parent=Msa1385730;Name=Msa1385730-mRNA-1;_AED=0.13;_eAED=0.13;_QI=211|1|1|1|0.87|0.77|9|566|216 |
| tig0020776 | exon | 21784 | 22433 | 21784 | ID=Msa1385730-mRNA-1:exon:9827;Parent=Msa1385730-mRNA-1 |
| tig0020776 | exon | 22645 | 22737 | 22645 | ID=Msa1385730-mRNA-1:exon:9826;Parent=Msa1385730-mRNA-1 |
| tig0020776 | exon | 22826 | 22888 | 22826 | ID=Msa1385730-mRNA-1:exon:9825;Parent=Msa1385730-mRNA-1 |
| tig0020776 | exon | 22998 | 23095 | 22998 | ID=Msa1385730-mRNA-1:exon:9824;Parent=Msa1385730-mRNA-1 |
| tig0020776 | exon | 23313 | 23378 | 23313 | ID=Msa1385730-mRNA-1:exon:9823;Parent=Msa1385730-mRNA-1 |
| tig0020776 | exon | 24096 | 24196 | 24096 | ID=Msa1385730-mRNA-1:exon:9822;Parent=Msa1385730-mRNA-1 |
| tig0020776 | exon | 24284 | 24356 | 24284 | ID=Msa1385730-mRNA-1:exon:9821;Parent=Msa1385730-mRNA-1 |
| tig0020776 | exon | 24489 | 24584 | 24489 | ID=Msa1385730-mRNA-1:exon:9820;Parent=Msa1385730-mRNA-1 |
| tig0020776 | exon | 24724 | 24911 | 24724 | ID=Msa1385730-mRNA-1:exon:9819;Parent=Msa1385730-mRNA-1 |
| tig0020776 | five_prime_UTR | 24724 | 24911 | 24724 | ID=Msa1385730-mRNA-1:five_prime_utr;Parent=Msa1385730-mRNA-1 |
| tig0020776 | five_prime_UTR | 24562 | 24584 | 24562 | ID=Msa1385730-mRNA-1:five_prime_utr;Parent=Msa1385730-mRNA-1 |
| tig0020776 | CDS | 24489 | 24561 | 24489 | ID=Msa1385730-mRNA-1:cds;Parent=Msa1385730-mRNA-1 |
| tig0020776 | CDS | 24284 | 24356 | 24284 | ID=Msa1385730-mRNA-1:cds;Parent=Msa1385730-mRNA-1 |
| tig0020776 | CDS | 24096 | 24196 | 24096 | ID=Msa1385730-mRNA-1:cds;Parent=Msa1385730-mRNA-1 |
| tig0020776 | CDS | 23313 | 23378 | 23313 | ID=Msa1385730-mRNA-1:cds;Parent=Msa1385730-mRNA-1 |
| tig0020776 | CDS | 22998 | 23095 | 22998 | ID=Msa1385730-mRNA-1:cds;Parent=Msa1385730-mRNA-1 |
| tig0020776 | CDS | 22826 | 22888 | 22826 | ID=Msa1385730-mRNA-1:cds;Parent=Msa1385730-mRNA-1 |
| tig0020776 | CDS | 22645 | 22737 | 22645 | ID=Msa1385730-mRNA-1:cds;Parent=Msa1385730-mRNA-1 |
| tig0020776 | CDS | 22350 | 22433 | 22350 | ID=Msa1385730-mRNA-1:cds;Parent=Msa1385730-mRNA-1 |
| tig0020776 | three_prime_UTR | 21784 | 22349 | 21784 | ID=Msa1385730-mRNA-1:three_prime_utr;Parent=Msa1385730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
