AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1128270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1128270 MtrunA17_Chr7g0271871 98.496 532 8 0 1 532 1 532 0.0 1078
Msa1128270 MtrunA17_Chr1g0192541 88.910 532 59 0 1 532 1 532 0.0 989
Msa1128270 MtrunA17_Chr2g0294881 83.271 532 85 3 1 531 1 529 0.0 910
Msa1128270 MtrunA17_Chr4g0068051 71.985 539 132 6 1 531 1 528 0.0 783
Msa1128270 MtrunA17_Chr4g0074371 77.230 426 97 0 79 504 1 426 0.0 699
Msa1128270 MtrunA17_Chr4g0075701 71.163 430 122 2 70 498 3 431 0.0 635
Msa1128270 MtrunA17_Chr4g0075691 73.005 426 114 1 83 507 2 427 0.0 631
Msa1128270 MtrunA17_Chr8g0346871 71.868 423 118 1 110 532 15 436 0.0 622
Msa1128270 MtrunA17_Chr4g0074081 66.234 462 118 3 79 504 1 460 0.0 603
Msa1128270 MtrunA17_Chr1g0174791 70.000 300 87 3 208 504 1 300 3.57e-143 414
Msa1128270 MtrunA17_Chr1g0174791 26.047 215 145 6 108 314 30 238 2.11e-11 65.1
Msa1128270 MtrunA17_Chr7g0271821 45.027 553 247 13 1 499 1 550 8.37e-143 422
Msa1128270 MtrunA17_Chr7g0272761 45.749 494 234 12 14 496 15 485 2.72e-117 355
Msa1128270 MtrunA17_Chr7g0271831 48.821 424 191 10 85 504 7 408 6.11e-112 338
Msa1128270 MtrunA17_Chr4g0004921 60.949 274 57 4 261 532 1 226 5.55e-105 314
Msa1128270 MtrunA17_Chr4g0071961 72.297 148 41 0 364 511 2 149 3.74e-69 221
Msa1128270 MtrunA17_Chr4g0075651 74.286 140 36 0 367 506 9 148 6.87e-68 215
Msa1128270 MtrunA17_Chr1g0181541 30.116 518 317 15 14 499 10 514 9.70e-54 189
Msa1128270 MtrunA17_Chr4g0004931 60.417 144 43 1 110 253 11 140 2.15e-50 169
Msa1128270 MtrunA17_Chr4g0075601 56.028 141 49 1 364 491 1 141 6.06e-45 155
Msa1128270 MtrunA17_Chr4g0071971 68.571 105 32 1 263 366 10 114 3.23e-40 142
Msa1128270 MtrunA17_Chr4g0075621 62.376 101 38 0 79 179 1 101 3.83e-40 141
Msa1128270 MtrunA17_Chr4g0071981 60.976 82 28 1 83 160 2 83 2.60e-26 102
Msa1128270 MtrunA17_Chr4g0075631 82.353 51 9 0 219 269 1 51 1.85e-23 93.2
Msa1128270 MtrunA17_Chr4g0075641 40.909 154 61 6 276 408 2 146 3.08e-18 81.6
Msa1128270 MtrunA17_Chr4g0069541 61.667 60 23 0 322 381 55 114 6.35e-17 78.2
Msa1128270 MtrunA17_Chr7g0237931 27.519 258 180 6 135 392 349 599 5.31e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1128270 AT4G16143.2 80.224 536 99 2 1 531 1 534 0.0 868
Msa1128270 AT4G16143.1 80.224 536 99 2 1 531 1 534 0.0 868
Msa1128270 AT3G06720.1 79.252 535 105 4 1 532 1 532 0.0 864
Msa1128270 AT3G06720.2 79.252 535 105 4 1 532 1 532 0.0 864
Msa1128270 AT1G09270.2 73.383 541 130 6 1 531 1 537 0.0 785
Msa1128270 AT1G09270.1 73.383 541 130 6 1 531 1 537 0.0 785
Msa1128270 AT1G02690.1 69.630 540 152 5 1 531 1 537 0.0 771
Msa1128270 AT1G02690.2 69.501 541 152 6 1 531 1 538 0.0 766
Msa1128270 AT4G02150.1 70.315 539 143 5 1 531 1 530 0.0 761
Msa1128270 AT1G09270.3 77.193 456 99 3 79 531 2 455 0.0 705
Msa1128270 AT5G49310.1 63.872 501 174 4 1 501 1 494 0.0 633
Msa1128270 AT3G05720.1 64.300 493 157 6 13 497 9 490 0.0 613
Msa1128270 AT3G05720.2 64.300 493 157 6 13 497 9 490 0.0 613
Msa1128270 AT4G02150.2 71.325 415 106 3 1 408 1 409 0.0 603
Msa1128270 AT5G52000.1 52.381 420 187 6 79 497 14 421 1.16e-143 421
Msa1128270 AT5G49305.5 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1128270 AT5G49305.3 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1128270 AT5G49305.4 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1128270 AT5G49305.1 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1128270 AT5G49305.2 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1128270 AT1G32880.1 63.265 147 49 3 363 507 40 183 8.57e-56 185
Msa1128270 AT5G03070.1 28.958 518 323 12 14 499 10 514 1.27e-51 184

Find 201 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGTTCTTATGTTCTTTA+AGG 0.042859 7_3:+80138113 Msa1128270:three_prime_UTR
ACTTATGATTCTAGGTATTT+TGG 0.077981 7_3:+80138362 Msa1128270:three_prime_UTR
GCAGGGTTGAAGAGTGAAAT+TGG 0.223129 7_3:-80133519 None:intergenic
ATTATGTGGTGTTACAAATA+TGG 0.227939 7_3:+80138517 Msa1128270:three_prime_UTR
GATGTTCCTGCCGTGCCTTC+TGG 0.268271 7_3:+80137847 Msa1128270:CDS
TGGGAACAAGCAACAGATTC+AGG 0.277528 7_3:+80137172 Msa1128270:CDS
CCTCAGATTTATGATTCATT+AGG 0.289947 7_3:+80138484 Msa1128270:three_prime_UTR
AGTGATCATTTCAAGTGATT+TGG 0.291087 7_3:+80138275 Msa1128270:three_prime_UTR
GTGATTGATGCCAGTATAAT+TGG 0.305012 7_3:+80137285 Msa1128270:CDS
CCAGGTGATGCTTCTCAATC+AGG 0.305394 7_3:+80137805 Msa1128270:CDS
CACCTACCAGCCTTGGTTAC+AGG 0.310563 7_3:+80134452 Msa1128270:CDS
ATCTAATCTACTCGAGAAAA+AGG 0.313044 7_3:+80133876 Msa1128270:CDS
AAGGTTCAGCCTTGGTAAAT+AGG 0.318530 7_3:+80138132 Msa1128270:three_prime_UTR
TAAATATTAGAGTTTGCTTT+TGG 0.324152 7_3:+80138249 Msa1128270:three_prime_UTR
GATTGACGAAGCTGAGGGTT+TGG 0.332266 7_3:+80137678 Msa1128270:CDS
AGGGCTTGAAAACATCTTAA+AGG 0.333351 7_3:+80137597 Msa1128270:CDS
AGTATGGCAGTTCGACAGTT+GGG 0.344014 7_3:+80138070 Msa1128270:three_prime_UTR
GGCCGTTACTGGACCGGCTT+GGG 0.345727 7_3:+80138153 Msa1128270:three_prime_UTR
TTTCTTCCCTCCGATTCTTC+CGG 0.351570 7_3:-80133795 None:intergenic
TGCCAGTATAATTGGTCCTT+TGG 0.355834 7_3:+80137293 Msa1128270:CDS
GTTTCTGAGCATAGAAAGTT+TGG 0.355939 7_3:-80135448 None:intergenic
TGGATTCAACTTTAACTAGA+TGG 0.358677 7_3:+80137870 Msa1128270:exon
AGGAAAGGGGTTTATATTGC+AGG 0.365118 7_3:-80133537 None:intergenic
CAATCAGGGTTCAACTTTGG+TGG 0.368535 7_3:+80137820 Msa1128270:CDS
TGTCAGGCCGTGTGGGCATT+GGG 0.369223 7_3:+80135336 Msa1128270:intron
AGACTTCTTCATCATTTGAA+TGG 0.376843 7_3:-80136270 None:intergenic
GCATCAAGAAGGAAGCTTGC+TGG 0.387204 7_3:+80137129 Msa1128270:CDS
CTGTCAGGCCGTGTGGGCAT+TGG 0.388924 7_3:+80135335 Msa1128270:intron
GCTTTGACAAATATAGCTTC+TGG 0.398936 7_3:+80134823 Msa1128270:CDS
CAGCCTTGGTTACAGGAATC+TGG 0.399141 7_3:+80134459 Msa1128270:CDS
ATCAGTGAGGTTCTCCAGTA+TGG 0.404246 7_3:+80138054 Msa1128270:three_prime_UTR
CAACTGTCGAACTGCCATAC+TGG 0.405922 7_3:-80138068 None:intergenic
TCGGTTCTCGCGTTTGCGTT+AGG 0.408259 7_3:-80133694 None:intergenic
TGGAGCTTTGCTTCCTCTGT+TGG 0.414916 7_3:+80135407 Msa1128270:CDS
TAGTGATGATGTTCGTGAAC+AGG 0.421824 7_3:+80134918 Msa1128270:CDS
ATTGTGACAGTTTGTCTTGA+AGG 0.422808 7_3:+80137577 Msa1128270:CDS
AGATGCCGTGATCTTGTTCT+CGG 0.423165 7_3:+80135381 Msa1128270:CDS
TTTCGGAAGTTGCTTTCAAT+TGG 0.424061 7_3:+80134521 Msa1128270:CDS
TTGAGGCAACAACTCAGTTT+CGG 0.428701 7_3:+80134504 Msa1128270:CDS
AGCGTACCACTTATGATTCT+AGG 0.429517 7_3:+80138354 Msa1128270:three_prime_UTR
AAGATATGAAAGTGCCCAAC+AGG 0.430566 7_3:-80136302 None:intergenic
AAAGAGAGGAATGAAGGAAA+GGG 0.431348 7_3:-80133551 None:intergenic
GATGAAAGAATAGTATCATT+TGG 0.432245 7_3:-80138391 None:intergenic
TCTCAATCAGGGTTCAACTT+TGG 0.432782 7_3:+80137817 Msa1128270:CDS
TAGGATTTCTATTCATTATG+TGG 0.441663 7_3:+80138503 Msa1128270:three_prime_UTR
ACGCTGACTCCAACCTTAGC+AGG 0.452189 7_3:-80138336 None:intergenic
TGAAGATTCTCGAGACATAC+TGG 0.452976 7_3:+80137755 Msa1128270:CDS
CAGGGTTGAAGAGTGAAATT+GGG 0.460877 7_3:-80133518 None:intergenic
GACCAAAGGACCAATTATAC+TGG 0.463096 7_3:-80137295 None:intergenic
CAACACTGAGATTTATGAAA+AGG 0.463560 7_3:+80137729 Msa1128270:CDS
GGGGAACAGTTGGGTGTGGC+CGG 0.465398 7_3:+80138205 Msa1128270:three_prime_UTR
CTTGGATCGGAATAGAATTA+CGG 0.465542 7_3:-80133483 None:intergenic
CTGGCAAGTGCAGGAAGTGC+AGG 0.465783 7_3:-80136241 None:intergenic
GCACTTTCATATCTTTCTGA+TGG 0.469094 7_3:+80136310 Msa1128270:CDS
AGTCTTGACTGATGCCTGTT+GGG 0.470829 7_3:+80136288 Msa1128270:CDS
GTTGTAGTTTGAGGCAGCAT+GGG 0.471388 7_3:+80134801 Msa1128270:intron
AGACAAACTGTCACAATCCT+AGG 0.471935 7_3:-80137571 None:intergenic
TGGGCATTGGGAAATGTTGC+TGG 0.473260 7_3:+80135348 Msa1128270:CDS
GGACACTCTCAAACTTCTGC+AGG 0.478892 7_3:+80135478 Msa1128270:CDS
TTTCCAACTGTGCGTAGAGC+AGG 0.479185 7_3:-80136517 None:intergenic
CGTGATCTTGTTCTCGGTCA+TGG 0.484918 7_3:+80135387 Msa1128270:CDS
TAAATAGGCCGTTACTGGAC+CGG 0.490100 7_3:+80138147 Msa1128270:three_prime_UTR
AGGCCGTTACTGGACCGGCT+TGG 0.491523 7_3:+80138152 Msa1128270:three_prime_UTR
TGATAATAACATGCAGTTTG+AGG 0.493472 7_3:+80134487 Msa1128270:CDS
TTGTGACAGTTTGTCTTGAA+GGG 0.493627 7_3:+80137578 Msa1128270:CDS
TACTCACATGTCCTGATCCT+AGG 0.494731 7_3:+80137554 Msa1128270:CDS
CAGATTCCTGTAACCAAGGC+TGG 0.496109 7_3:-80134458 None:intergenic
ATCATTTGAATGGATGAGAC+TGG 0.497906 7_3:-80136260 None:intergenic
GTTTGAAAAGAGAGGAATGA+AGG 0.499140 7_3:-80133557 None:intergenic
ATCAAGAGGTTCTTAAGAGA+AGG 0.500451 7_3:-80137089 None:intergenic
TCTAATATTTAACTCGGAAG+TGG 0.500946 7_3:-80138237 None:intergenic
AGTGAAATTGGGTATGAAAG+TGG 0.502202 7_3:-80133507 None:intergenic
TTGAAGCTGGTGTCTGTAGC+CGG 0.506023 7_3:+80136359 Msa1128270:CDS
GCATCACTGATGGCGTGAAT+CGG 0.506234 7_3:+80137644 Msa1128270:CDS
ATTGGGTATGAAAGTGGACT+TGG 0.510609 7_3:-80133501 None:intergenic
CAGGTGATGCTTCTCAATCA+GGG 0.510659 7_3:+80137806 Msa1128270:CDS
CATACAACAGGGGAACAGTT+GGG 0.510761 7_3:+80138196 Msa1128270:three_prime_UTR
TGGTTGAGATCCGGAAGAAT+CGG 0.510945 7_3:+80133785 Msa1128270:CDS
TCGGAAGTGGCAAGAAAAGC+CGG 0.511762 7_3:-80138224 None:intergenic
CTTGAAAACATCTTAAAGGT+AGG 0.512889 7_3:+80137601 Msa1128270:CDS
AGGATAACTTGGTTGAGATC+CGG 0.514824 7_3:+80133776 Msa1128270:CDS
TAATGCACCCTTGACTTACC+AGG 0.515624 7_3:-80137516 None:intergenic
GGTGCAAATGACAAAATTCA+AGG 0.516277 7_3:+80136331 Msa1128270:CDS
CCTGATTGAGAAGCATCACC+TGG 0.519394 7_3:-80137805 None:intergenic
TTGAAAACATCTTAAAGGTA+GGG 0.520099 7_3:+80137602 Msa1128270:CDS
AAAAGAGAGGAATGAAGGAA+AGG 0.520713 7_3:-80133552 None:intergenic
ACAATTTCGAACATCACAGC+TGG 0.521802 7_3:+80137152 Msa1128270:CDS
GGAATAAGCACAGAAGGAGA+TGG 0.522068 7_3:-80136496 None:intergenic
AGTCCAGATTCCTGTAACCA+AGG 0.523005 7_3:-80134462 None:intergenic
CTTTCATCATTAAAGTTGCA+AGG 0.523396 7_3:+80138406 Msa1128270:three_prime_UTR
GGCAATCTCAAATGCTACAT+CGG 0.524735 7_3:+80137365 Msa1128270:CDS
GTGGCGGTTGATGCGGAAGA+AGG 0.528330 7_3:+80133739 Msa1128270:CDS
AGAACGTAGCCCACCGATTG+AGG 0.529104 7_3:+80134628 Msa1128270:intron
ACCTGATCAAAAGCAGGTTG+TGG 0.529289 7_3:-80135507 None:intergenic
GCAATCTCAAATGCTACATC+GGG 0.530239 7_3:+80137366 Msa1128270:CDS
GCTTGTATAACCTCCTCAAT+CGG 0.530974 7_3:-80134641 None:intergenic
GTATGGCAGTTCGACAGTTG+GGG 0.531650 7_3:+80138071 Msa1128270:three_prime_UTR
AGATTAGATTGAACTGATGC+AGG 0.532270 7_3:-80133862 None:intergenic
ACATACAACAGGGGAACAGT+TGG 0.532326 7_3:+80138195 Msa1128270:three_prime_UTR
TAAATTGGTCGACAGGTACC+TGG 0.532438 7_3:+80137498 Msa1128270:intron
AAGAGAGGAATGAAGGAAAG+GGG 0.535623 7_3:-80133550 None:intergenic
GTTCCTGCCGTGCCTTCTGG+TGG 0.536067 7_3:+80137850 Msa1128270:CDS
TCTCAGTGTTGTCATGACTC+TGG 0.536088 7_3:-80137717 None:intergenic
TGTTGTAGTTTGAGGCAGCA+TGG 0.536379 7_3:+80134800 Msa1128270:intron
GGAAAGGGGTTTATATTGCA+GGG 0.536788 7_3:-80133536 None:intergenic
GATGACGAGGCTATGCCTCC+AGG 0.538922 7_3:+80137787 Msa1128270:CDS
ACTGTCACAATCCTAGGATC+AGG 0.541962 7_3:-80137565 None:intergenic
GTTGGAACACCTACCAGCCT+TGG 0.541974 7_3:+80134445 Msa1128270:intron
AGAACAAGATCACGGCATCT+AGG 0.541982 7_3:-80135378 None:intergenic
CTTTATACCTGATCAAAAGC+AGG 0.544346 7_3:-80135513 None:intergenic
ATTAAAGTTGCAAGGAAACT+CGG 0.546544 7_3:+80138414 Msa1128270:three_prime_UTR
AAACACTAAGGTAGTAATTG+AGG 0.546623 7_3:+80134855 Msa1128270:CDS
AGAAGGTCGGAGACGGAGAG+AGG 0.547856 7_3:+80133756 Msa1128270:CDS
AACCCAAGCCGGTCCAGTAA+CGG 0.547933 7_3:-80138155 None:intergenic
TGTGGACTGTCAGGCCGTGT+GGG 0.549793 7_3:+80135329 Msa1128270:intron
AATCCACCAGAAGGCACGGC+AGG 0.551892 7_3:-80137853 None:intergenic
GTATCGATTCCGACGAACCT+CGG 0.552883 7_3:-80133713 None:intergenic
AGCCATTTCAAAACCCAAGC+CGG 0.556130 7_3:-80138166 None:intergenic
GAGTGAGGGTTTGAAAAGAG+AGG 0.556565 7_3:-80133565 None:intergenic
AGAAGGCACGGCAGGAACAT+CGG 0.557422 7_3:-80137845 None:intergenic
CAGTATGGCAGTTCGACAGT+TGG 0.558125 7_3:+80138069 Msa1128270:three_prime_UTR
AAAATACCTAGAATCATAAG+TGG 0.559223 7_3:-80138360 None:intergenic
TATCAAGAAGGAAGCAGCCT+GGG 0.559372 7_3:+80137344 Msa1128270:CDS
TGTTCTTTAAGGTTCAGCCT+TGG 0.560151 7_3:+80138124 Msa1128270:three_prime_UTR
GAGACGGAGAGAGGATAACT+TGG 0.560975 7_3:+80133765 Msa1128270:CDS
ATTCCTGCTCTACGCACAGT+TGG 0.563062 7_3:+80136514 Msa1128270:CDS
ATTCAAGGCGTAATTGAAGC+TGG 0.564008 7_3:+80136346 Msa1128270:CDS
ATCTCAAATGCTACATCGGG+TGG 0.565698 7_3:+80137369 Msa1128270:CDS
TGAAAACATCTTAAAGGTAG+GGG 0.566752 7_3:+80137603 Msa1128270:CDS
AGAGCAGGAATAAGCACAGA+AGG 0.573010 7_3:-80136502 None:intergenic
ATGCGGAAGAAGGTCGGAGA+CGG 0.573816 7_3:+80133749 Msa1128270:CDS
ATTGAGGAGGTTATACAAGC+TGG 0.574779 7_3:+80134644 Msa1128270:CDS
GACAGGTACCTGGTAAGTCA+AGG 0.575549 7_3:+80137508 Msa1128270:intron
AAGAAAGCTTGCAGAAGAAG+AGG 0.576091 7_3:+80133812 Msa1128270:CDS
TTGCAGAAGAAGAGGCGTGA+AGG 0.577170 7_3:+80133820 Msa1128270:CDS
AAGATAATAACCTGCAGCTG+TGG 0.578665 7_3:-80134710 None:intergenic
GACACTCTCAAACTTCTGCA+GGG 0.582716 7_3:+80135479 Msa1128270:CDS
ATTCACGCCATCAGTGATGC+CGG 0.582855 7_3:-80137641 None:intergenic
GATTCTCGAGACATACTGGT+TGG 0.583097 7_3:+80137759 Msa1128270:CDS
CGGTTGATGCGGAAGAAGGT+CGG 0.583578 7_3:+80133743 Msa1128270:CDS
TGTAGCATTTGAGATTGCCC+AGG 0.583736 7_3:-80137361 None:intergenic
AAGTCTTGACTGATGCCTGT+TGG 0.583997 7_3:+80136287 Msa1128270:CDS
TGGAACATCTGAAAACACTA+AGG 0.585901 7_3:+80134843 Msa1128270:CDS
TATGGCAGTTCGACAGTTGG+GGG 0.586736 7_3:+80138072 Msa1128270:three_prime_UTR
TGGATGAGACTGGCAAGTGC+AGG 0.586919 7_3:-80136250 None:intergenic
GTGTGGACTGTCAGGCCGTG+TGG 0.587261 7_3:+80135328 Msa1128270:intron
ATATCAAGAAGGAAGCAGCC+TGG 0.587274 7_3:+80137343 Msa1128270:CDS
GTTGAATCCACCAGAAGGCA+CGG 0.589872 7_3:-80137857 None:intergenic
TCTCGAGACATACTGGTTGG+AGG 0.590172 7_3:+80137762 Msa1128270:CDS
GAATAAGCACAGAAGGAGAT+GGG 0.590390 7_3:-80136495 None:intergenic
AGTGAAAGAGCGAAGCAGAA+AGG 0.590626 7_3:-80133587 None:intergenic
ACAGTTGGAAATATTGTCAC+TGG 0.591504 7_3:+80136529 Msa1128270:CDS
GGTTCGTCGGAATCGATACA+AGG 0.595021 7_3:+80133717 Msa1128270:CDS
ACGCGAGAACCGAGGTTCGT+CGG 0.595335 7_3:+80133704 Msa1128270:CDS
TGTATAACCTCCTCAATCGG+TGG 0.596128 7_3:-80134638 None:intergenic
TGCTGAGTTTGATATCAAGA+AGG 0.598148 7_3:+80137332 Msa1128270:CDS
TTTACAATCGGTTTAACGAA+CGG 0.598850 7_3:-80133656 None:intergenic
CAGTGTTGTCATGACTCTGG+AGG 0.600196 7_3:-80137714 None:intergenic
AACATTTCCCAATGCCCACA+CGG 0.600269 7_3:-80135343 None:intergenic
GTATGAAAGTGGACTTGGAT+CGG 0.602378 7_3:-80133496 None:intergenic
ATACTGGAGAACCTCACTGA+TGG 0.603112 7_3:-80138052 None:intergenic
AGCGAAGCAGAAAGGAGTGA+GGG 0.608076 7_3:-80133579 None:intergenic
ATACAAGGTGGCGGTTGATG+CGG 0.609006 7_3:+80133732 Msa1128270:CDS
GTATAACCTCCTCAATCGGT+GGG 0.609405 7_3:-80134637 None:intergenic
TTGAGATCCGGAAGAATCGG+AGG 0.610209 7_3:+80133788 Msa1128270:CDS
ACAGTAGAAGCTCAACAAGC+CGG 0.611612 7_3:-80136378 None:intergenic
ACTAAGGTAGTAATTGAGGC+AGG 0.612619 7_3:+80134859 Msa1128270:CDS
AACAGGGGAACAGTTGGGTG+TGG 0.613895 7_3:+80138201 Msa1128270:three_prime_UTR
CCTAATGAATCATAAATCTG+AGG 0.614833 7_3:-80138484 None:intergenic
GCAAACTCTAATATTTAACT+CGG 0.618670 7_3:-80138243 None:intergenic
GAGCGAAGCAGAAAGGAGTG+AGG 0.618742 7_3:-80133580 None:intergenic
ACTGATGCAGGCATCTGCTG+AGG 0.637302 7_3:-80133850 None:intergenic
CTGGTTGGAGGAAGATGACG+AGG 0.640896 7_3:+80137774 Msa1128270:CDS
TAAGAGAAGGAAGAACTCGA+TGG 0.641399 7_3:-80137076 None:intergenic
ACAGGTACCTGGTAAGTCAA+GGG 0.643325 7_3:+80137509 Msa1128270:intron
TGAAATGATTGACGAAGCTG+AGG 0.643868 7_3:+80137672 Msa1128270:CDS
CAATTTCGAACATCACAGCT+GGG 0.644095 7_3:+80137153 Msa1128270:CDS
ACATGTGAGTAGATCACACA+AGG 0.644923 7_3:-80137542 None:intergenic
TTCCTGTAACCAAGGCTGGT+AGG 0.648193 7_3:-80134454 None:intergenic
TGGAGATGACTTGCAGACAC+AGG 0.648488 7_3:+80136549 Msa1128270:CDS
CTATGCTCAGAAACGCCACA+TGG 0.649323 7_3:+80135457 Msa1128270:CDS
TCATTCAATTGCGCCAACAG+AGG 0.649416 7_3:-80135420 None:intergenic
AATCACTTGAAATGATCACT+AGG 0.649903 7_3:-80138272 None:intergenic
TGTTCACGAACATCATCACT+AGG 0.652458 7_3:-80134916 None:intergenic
CATCATCACTAGGAGAAGCA+AGG 0.654239 7_3:-80134906 None:intergenic
ACACTCTCAAACTTCTGCAG+GGG 0.658228 7_3:+80135480 Msa1128270:CDS
TTAAAGTTGAATCCACCAGA+AGG 0.661830 7_3:-80137862 None:intergenic
TCGGAATCGATACAAGGTGG+CGG 0.663630 7_3:+80133723 Msa1128270:CDS
TGAGATCCGGAAGAATCGGA+GGG 0.664863 7_3:+80133789 Msa1128270:CDS
ACGTAGCCCACCGATTGAGG+AGG 0.667976 7_3:+80134631 Msa1128270:CDS
CATGACCGAGAACAAGATCA+CGG 0.670358 7_3:-80135386 None:intergenic
CAGTAACGGCCTATTTACCA+AGG 0.682650 7_3:-80138141 None:intergenic
TAACGCAAACGCGAGAACCG+AGG 0.690745 7_3:+80133696 Msa1128270:CDS
ATGGCAGTTCGACAGTTGGG+GGG 0.690929 7_3:+80138073 Msa1128270:three_prime_UTR
TAAGCACAGAAGGAGATGGG+TGG 0.711417 7_3:-80136492 None:intergenic
GAAATGATTGACGAAGCTGA+GGG 0.713200 7_3:+80137673 Msa1128270:CDS
GATTGAGAAGCATCACCTGG+AGG 0.716664 7_3:-80137802 None:intergenic
ATCAAGAACTCAATAAAACG+AGG 0.733523 7_3:-80134674 None:intergenic
TCGTCGGAATCGATACAAGG+TGG 0.735526 7_3:+80133720 Msa1128270:CDS
CATGTGAGTAGATCACACAA+GGG 0.757129 7_3:-80137541 None:intergenic
GAAGTTTGAGAGTGTCCATG+TGG 0.759250 7_3:-80135472 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATTATTATAACTCA+TGG + chr7_3:80134183-80134202 Msa1128270:intron 10.0%
!!! TTTTTGTATACAATTTTTTA+AGG + chr7_3:80134581-80134600 Msa1128270:intron 10.0%
!!! TTTTGTATACAATTTTTTAA+GGG + chr7_3:80134582-80134601 Msa1128270:intron 10.0%
!! TAGTTTATATTGAAAAATTA+TGG + chr7_3:80135824-80135843 Msa1128270:intron 10.0%
!!! TGAAATTCTAATTATTATTT+TGG + chr7_3:80136459-80136478 Msa1128270:intron 10.0%
!!! TATTATTTTACTTTTGATTT+TGG + chr7_3:80137012-80137031 Msa1128270:intron 10.0%
!!! TTTGTATACAATTTTTTAAG+GGG + chr7_3:80134583-80134602 Msa1128270:intron 15.0%
!! CAGATATAAACAAATATTAA+AGG - chr7_3:80135687-80135706 None:intergenic 15.0%
!! AATAAGAAAATTCAAACAAA+TGG - chr7_3:80135740-80135759 None:intergenic 15.0%
!!! TTTTATAACTATTAATCAAG+AGG - chr7_3:80137106-80137125 None:intergenic 15.0%
!!! ATGTCATAATCTTTTTAAAT+TGG + chr7_3:80137483-80137502 Msa1128270:intron 15.0%
!!! TTGTTGTGTTTTTTTTTTTT+TGG + chr7_3:80137935-80137954 Msa1128270:intron 15.0%
!! CAGTAAAAAAAAAAAAAAAC+AGG - chr7_3:80138457-80138476 None:intergenic 15.0%
!!! AATTGAGAAATTGATAATAC+TGG + chr7_3:80133981-80134000 Msa1128270:intron 20.0%
!!! CAAAATTGATGATAGTAATT+AGG + chr7_3:80134110-80134129 Msa1128270:intron 20.0%
!! ACAAGGTTTGATTAATATTA+TGG + chr7_3:80134376-80134395 Msa1128270:intron 20.0%
!! CTATTGCATAAAATAAAACA+AGG - chr7_3:80134736-80134755 None:intergenic 20.0%
!!! ACCATATAAATTTTACTGAT+AGG - chr7_3:80134989-80135008 None:intergenic 20.0%
!!! TATGGTTTCTTACTTTTTAT+TGG + chr7_3:80135003-80135022 Msa1128270:intron 20.0%
!!! ATGGTTTCTTACTTTTTATT+GGG + chr7_3:80135004-80135023 Msa1128270:intron 20.0%
!! CTTCATTAACAAAAAAAGAA+GGG - chr7_3:80135035-80135054 None:intergenic 20.0%
!! ACTTCATTAACAAAAAAAGA+AGG - chr7_3:80135036-80135055 None:intergenic 20.0%
!!! TTTTTGTTAATGAAGTTAAC+CGG + chr7_3:80135040-80135059 Msa1128270:intron 20.0%
!!! TGATAATTTTTCAACATACA+AGG - chr7_3:80135785-80135804 None:intergenic 20.0%
!! TGAAATTAAAATTAAACGCA+TGG + chr7_3:80136679-80136698 Msa1128270:intron 20.0%
!!! TTATAAAAAAAGCATCAAGA+AGG + chr7_3:80137118-80137137 Msa1128270:CDS 20.0%
!! TTAAAAAGATTATGACATCT+CGG - chr7_3:80137481-80137500 None:intergenic 20.0%
!!! ATGGTATTCATGTTTTATTA+AGG + chr7_3:80137889-80137908 Msa1128270:three_prime_UTR 20.0%
!! GGTAATCTATATGTTATATT+TGG + chr7_3:80137910-80137929 Msa1128270:intron 20.0%
!!! TAAATATTAGAGTTTGCTTT+TGG + chr7_3:80138249-80138268 Msa1128270:three_prime_UTR 20.0%
!! AAAAAAAAAAAAACAGGACA+GGG - chr7_3:80138451-80138470 None:intergenic 20.0%
!! AAAAAAAAAAAAAACAGGAC+AGG - chr7_3:80138452-80138471 None:intergenic 20.0%
! AACGTAGTAAAGTAGAAAAT+CGG - chr7_3:80133940-80133959 None:intergenic 25.0%
! CGTTGGATAAGTTATTTATT+AGG + chr7_3:80133956-80133975 Msa1128270:intron 25.0%
!! GAAATTGATAATACTGGATT+AGG + chr7_3:80133987-80134006 Msa1128270:intron 25.0%
!! ATATATTGATAGTAGCGATT+AGG + chr7_3:80134019-80134038 Msa1128270:intron 25.0%
! TGAATCAAAACAACATAAAC+AGG - chr7_3:80134144-80134163 None:intergenic 25.0%
!!! AGCAGTGTTTGTTAATTTTA+AGG + chr7_3:80134262-80134281 Msa1128270:intron 25.0%
!!! GCAGTGTTTGTTAATTTTAA+GGG + chr7_3:80134263-80134282 Msa1128270:intron 25.0%
! GGTTTGATTAATATTATGGT+AGG + chr7_3:80134380-80134399 Msa1128270:intron 25.0%
!! TTTTATTGAGTTCTTGATGA+GGG + chr7_3:80134679-80134698 Msa1128270:CDS 25.0%
! GCCTATCAGTAAAATTTATA+TGG + chr7_3:80134985-80135004 Msa1128270:intron 25.0%
!!! GTTCACTTTGATTTTAGATT+TGG + chr7_3:80135095-80135114 Msa1128270:intron 25.0%
!! AAATTTCTTGTTCAAGTTCT+AGG - chr7_3:80135659-80135678 None:intergenic 25.0%
!! AGAACTTGAACAAGAAATTT+TGG + chr7_3:80135659-80135678 Msa1128270:intron 25.0%
! ACAACACAGGTTAAATAATA+TGG - chr7_3:80135932-80135951 None:intergenic 25.0%
! TTTCACATCATAATAACCAA+GGG - chr7_3:80136444-80136463 None:intergenic 25.0%
! ATTTCACATCATAATAACCA+AGG - chr7_3:80136445-80136464 None:intergenic 25.0%
! AATTAAAATTAAACGCATGG+AGG + chr7_3:80136682-80136701 Msa1128270:intron 25.0%
!!! TTGATTTTGGTTTGTGTTAA+TGG + chr7_3:80137025-80137044 Msa1128270:intron 25.0%
!!! TGATTTTGGTTTGTGTTAAT+GGG + chr7_3:80137026-80137045 Msa1128270:intron 25.0%
! CTTGATTCTTGAAAATTTAC+AGG + chr7_3:80137260-80137279 Msa1128270:intron 25.0%
! TATAAAACCAACAAAATCAC+CGG - chr7_3:80137445-80137464 None:intergenic 25.0%
! TTGAAAACATCTTAAAGGTA+GGG + chr7_3:80137602-80137621 Msa1128270:CDS 25.0%
! CATTGTTCTTATGTTCTTTA+AGG + chr7_3:80138113-80138132 Msa1128270:three_prime_UTR 25.0%
! GCAAACTCTAATATTTAACT+CGG - chr7_3:80138246-80138265 None:intergenic 25.0%
! AAAATACCTAGAATCATAAG+TGG - chr7_3:80138363-80138382 None:intergenic 25.0%
!! ACTTATGATTCTAGGTATTT+TGG + chr7_3:80138362-80138381 Msa1128270:three_prime_UTR 25.0%
!! CTTATGATTCTAGGTATTTT+GGG + chr7_3:80138363-80138382 Msa1128270:three_prime_UTR 25.0%
! GATGAAAGAATAGTATCATT+TGG - chr7_3:80138394-80138413 None:intergenic 25.0%
! TAGGATTTCTATTCATTATG+TGG + chr7_3:80138503-80138522 Msa1128270:three_prime_UTR 25.0%
!!! ATTATGTGGTGTTACAAATA+TGG + chr7_3:80138517-80138536 Msa1128270:three_prime_UTR 25.0%
!! GTGTTACAAATATGGTTTTT+GGG + chr7_3:80138525-80138544 Msa1128270:three_prime_UTR 25.0%
!!! AATTTGTTGCACACTATTTT+TGG - chr7_3:80138562-80138581 None:intergenic 25.0%
! TTTACAATCGGTTTAACGAA+CGG - chr7_3:80133659-80133678 None:intergenic 30.0%
! ATACGACATCGTTTTACAAT+CGG - chr7_3:80133671-80133690 None:intergenic 30.0%
ATCTAATCTACTCGAGAAAA+AGG + chr7_3:80133876-80133895 Msa1128270:CDS 30.0%
! GATTTTCTACTTTACTACGT+TGG + chr7_3:80133939-80133958 Msa1128270:intron 30.0%
AATTGAGAAATTGATACTGC+TGG + chr7_3:80134044-80134063 Msa1128270:intron 30.0%
AAATGAAGCATAACAAGTAG+GGG - chr7_3:80134235-80134254 None:intergenic 30.0%
CAAATGAAGCATAACAAGTA+GGG - chr7_3:80134236-80134255 None:intergenic 30.0%
TCAAATGAAGCATAACAAGT+AGG - chr7_3:80134237-80134256 None:intergenic 30.0%
AACATGTTCATGATATTCAC+TGG + chr7_3:80134313-80134332 Msa1128270:intron 30.0%
TGATAATAACATGCAGTTTG+AGG + chr7_3:80134487-80134506 Msa1128270:CDS 30.0%
ATCAAGAACTCAATAAAACG+AGG - chr7_3:80134677-80134696 None:intergenic 30.0%
!! GTTTTATTGAGTTCTTGATG+AGG + chr7_3:80134678-80134697 Msa1128270:CDS 30.0%
TTACTGTATGTTGTAGTTTG+AGG + chr7_3:80134792-80134811 Msa1128270:intron 30.0%
AAACACTAAGGTAGTAATTG+AGG + chr7_3:80134855-80134874 Msa1128270:CDS 30.0%
TTACTGATAGGCAAAAACAA+AGG - chr7_3:80134977-80134996 None:intergenic 30.0%
ACACAAGTATAAAGTCCATT+TGG + chr7_3:80135604-80135623 Msa1128270:intron 30.0%
TAGTGGCATCTTGTAAATAA+AGG + chr7_3:80135877-80135896 Msa1128270:intron 30.0%
AATAAAGGTGGTCAAATTTG+TGG + chr7_3:80135892-80135911 Msa1128270:intron 30.0%
! AATTTGTGGTTTGTATGTGA+AGG + chr7_3:80135906-80135925 Msa1128270:intron 30.0%
AGACTTCTTCATCATTTGAA+TGG - chr7_3:80136273-80136292 None:intergenic 30.0%
AGAGAAATAGTAATACACAC+TGG + chr7_3:80136638-80136657 Msa1128270:intron 30.0%
GCGAATTATAATGAGGAAAT+TGG - chr7_3:80136817-80136836 None:intergenic 30.0%
TGACAAAGCGAATTATAATG+AGG - chr7_3:80136824-80136843 None:intergenic 30.0%
TTCTATTGCTGCTAATCATA+AGG - chr7_3:80136958-80136977 None:intergenic 30.0%
!!! GATTTTGGTTTGTGTTAATG+GGG + chr7_3:80137027-80137046 Msa1128270:intron 30.0%
ATCTGTGTTATCTTTGCATT+TGG + chr7_3:80137217-80137236 Msa1128270:intron 30.0%
CTTAAATTTACAATGTTCCC+CGG + chr7_3:80137423-80137442 Msa1128270:intron 30.0%
ATAAAACCAACAAAATCACC+GGG - chr7_3:80137444-80137463 None:intergenic 30.0%
! ATCTTTTTAAATTGGTCGAC+AGG + chr7_3:80137491-80137510 Msa1128270:intron 30.0%
CTTGAAAACATCTTAAAGGT+AGG + chr7_3:80137601-80137620 Msa1128270:CDS 30.0%
TGAAAACATCTTAAAGGTAG+GGG + chr7_3:80137603-80137622 Msa1128270:CDS 30.0%
CAACACTGAGATTTATGAAA+AGG + chr7_3:80137729-80137748 Msa1128270:CDS 30.0%
TGGATTCAACTTTAACTAGA+TGG + chr7_3:80137870-80137889 Msa1128270:exon 30.0%
TGTTGAATTTCTTTAACTGC+AGG + chr7_3:80138016-80138035 Msa1128270:intron 30.0%
TCTAATATTTAACTCGGAAG+TGG - chr7_3:80138240-80138259 None:intergenic 30.0%
AATCACTTGAAATGATCACT+AGG - chr7_3:80138275-80138294 None:intergenic 30.0%
! AGTGATCATTTCAAGTGATT+TGG + chr7_3:80138275-80138294 Msa1128270:three_prime_UTR 30.0%
!!! TTTCGTTATTTTTCCTGCTA+AGG + chr7_3:80138323-80138342 Msa1128270:three_prime_UTR 30.0%
CTTTCATCATTAAAGTTGCA+AGG + chr7_3:80138406-80138425 Msa1128270:three_prime_UTR 30.0%
ATTAAAGTTGCAAGGAAACT+CGG + chr7_3:80138414-80138433 Msa1128270:three_prime_UTR 30.0%
CCTAATGAATCATAAATCTG+AGG - chr7_3:80138487-80138506 None:intergenic 30.0%
CCTCAGATTTATGATTCATT+AGG + chr7_3:80138484-80138503 Msa1128270:three_prime_UTR 30.0%
!! GGTGTTACAAATATGGTTTT+TGG + chr7_3:80138524-80138543 Msa1128270:three_prime_UTR 30.0%
CTTGGATCGGAATAGAATTA+CGG - chr7_3:80133486-80133505 None:intergenic 35.0%
AGTGAAATTGGGTATGAAAG+TGG - chr7_3:80133510-80133529 None:intergenic 35.0%
AAAGAGAGGAATGAAGGAAA+GGG - chr7_3:80133554-80133573 None:intergenic 35.0%
AAAAGAGAGGAATGAAGGAA+AGG - chr7_3:80133555-80133574 None:intergenic 35.0%
GTTTGAAAAGAGAGGAATGA+AGG - chr7_3:80133560-80133579 None:intergenic 35.0%
AGATTAGATTGAACTGATGC+AGG - chr7_3:80133865-80133884 None:intergenic 35.0%
GAAATTGATACTGCTGGATT+AGG + chr7_3:80134050-80134069 Msa1128270:intron 35.0%
TGTTGTTATCATTCTGCAGT+TGG + chr7_3:80134427-80134446 Msa1128270:intron 35.0%
! TTTCGGAAGTTGCTTTCAAT+TGG + chr7_3:80134521-80134540 Msa1128270:CDS 35.0%
GCTTTGACAAATATAGCTTC+TGG + chr7_3:80134823-80134842 Msa1128270:CDS 35.0%
TGGAACATCTGAAAACACTA+AGG + chr7_3:80134843-80134862 Msa1128270:CDS 35.0%
! ACAAAGGCACAAATTGCATA+TGG - chr7_3:80134961-80134980 None:intergenic 35.0%
TTGTTAATGAAGTTAACCGG+AGG + chr7_3:80135043-80135062 Msa1128270:intron 35.0%
!! GTATGCTGTTTCTAGATTCT+AGG + chr7_3:80135121-80135140 Msa1128270:intron 35.0%
ATGAGATAGATCACACTAGA+TGG - chr7_3:80135282-80135301 None:intergenic 35.0%
GTTTCTGAGCATAGAAAGTT+TGG - chr7_3:80135451-80135470 None:intergenic 35.0%
CTTTATACCTGATCAAAAGC+AGG - chr7_3:80135516-80135535 None:intergenic 35.0%
CACACAGATGAGTAATTACA+AGG + chr7_3:80135573-80135592 Msa1128270:intron 35.0%
AAGTCCATTTGGTACACAAA+TGG + chr7_3:80135615-80135634 Msa1128270:intron 35.0%
AGTCCATTTGGTACACAAAT+GGG + chr7_3:80135616-80135635 Msa1128270:intron 35.0%
!! TTTCAACATACAAGGTGTTG+AGG - chr7_3:80135777-80135796 None:intergenic 35.0%
TGGCATCTTGTAAATAAAGG+TGG + chr7_3:80135880-80135899 Msa1128270:intron 35.0%
CAAAAAGACTGGTAAAACCA+AGG - chr7_3:80136132-80136151 None:intergenic 35.0%
AGTCAGCAAAACAAAAAGAC+TGG - chr7_3:80136143-80136162 None:intergenic 35.0%
ATCATTTGAATGGATGAGAC+TGG - chr7_3:80136263-80136282 None:intergenic 35.0%
GCACTTTCATATCTTTCTGA+TGG + chr7_3:80136310-80136329 Msa1128270:CDS 35.0%
GGTGCAAATGACAAAATTCA+AGG + chr7_3:80136331-80136350 Msa1128270:CDS 35.0%
ACAGTTGGAAATATTGTCAC+TGG + chr7_3:80136529-80136548 Msa1128270:CDS 35.0%
AGGAAATTTGTGCAATTGGA+CGG - chr7_3:80136880-80136899 None:intergenic 35.0%
TGAGAGGAAATTTGTGCAAT+TGG - chr7_3:80136884-80136903 None:intergenic 35.0%
AGTGCAACAGAATATACACA+TGG - chr7_3:80136917-80136936 None:intergenic 35.0%
TATTGCTGCTAATCATAAGG+AGG - chr7_3:80136955-80136974 None:intergenic 35.0%
ATCAAGAGGTTCTTAAGAGA+AGG - chr7_3:80137092-80137111 None:intergenic 35.0%
GTGATTGATGCCAGTATAAT+TGG + chr7_3:80137285-80137304 Msa1128270:CDS 35.0%
!!! TTTTGAAGCAAGTTGACCAA+AGG - chr7_3:80137312-80137331 None:intergenic 35.0%
TGCTGAGTTTGATATCAAGA+AGG + chr7_3:80137332-80137351 Msa1128270:CDS 35.0%
TCTCATGAACAACTCAAGTA+TGG + chr7_3:80137393-80137412 Msa1128270:intron 35.0%
CGGGGAACATTGTAAATTTA+AGG - chr7_3:80137425-80137444 None:intergenic 35.0%
TAAAACCAACAAAATCACCG+GGG - chr7_3:80137443-80137462 None:intergenic 35.0%
ATTGTGACAGTTTGTCTTGA+AGG + chr7_3:80137577-80137596 Msa1128270:CDS 35.0%
TTGTGACAGTTTGTCTTGAA+GGG + chr7_3:80137578-80137597 Msa1128270:CDS 35.0%
AGGGCTTGAAAACATCTTAA+AGG + chr7_3:80137597-80137616 Msa1128270:CDS 35.0%
TTAAAGTTGAATCCACCAGA+AGG - chr7_3:80137865-80137884 None:intergenic 35.0%
ACATGATGTCAACACAATAC+AGG - chr7_3:80137999-80138018 None:intergenic 35.0%
!!! TTAACTGCAGGTTTTTTAGC+TGG + chr7_3:80138028-80138047 Msa1128270:intron 35.0%
!!! GTTATTTTTCCTGCTAAGGT+TGG + chr7_3:80138327-80138346 Msa1128270:three_prime_UTR 35.0%
! GTATGAAAGTGGACTTGGAT+CGG - chr7_3:80133499-80133518 None:intergenic 40.0%
! ATTGGGTATGAAAGTGGACT+TGG - chr7_3:80133504-80133523 None:intergenic 40.0%
CAGGGTTGAAGAGTGAAATT+GGG - chr7_3:80133521-80133540 None:intergenic 40.0%
GGAAAGGGGTTTATATTGCA+GGG - chr7_3:80133539-80133558 None:intergenic 40.0%
AGGAAAGGGGTTTATATTGC+AGG - chr7_3:80133540-80133559 None:intergenic 40.0%
AAGAGAGGAATGAAGGAAAG+GGG - chr7_3:80133553-80133572 None:intergenic 40.0%
AGGATAACTTGGTTGAGATC+CGG + chr7_3:80133776-80133795 Msa1128270:CDS 40.0%
AAGAAAGCTTGCAGAAGAAG+AGG + chr7_3:80133812-80133831 Msa1128270:CDS 40.0%
CCTTGTAGCTACATACAGAT+GGG - chr7_3:80134362-80134381 None:intergenic 40.0%
ACCTTGTAGCTACATACAGA+TGG - chr7_3:80134363-80134382 None:intergenic 40.0%
TTGAGGCAACAACTCAGTTT+CGG + chr7_3:80134504-80134523 Msa1128270:CDS 40.0%
GCTTGTATAACCTCCTCAAT+CGG - chr7_3:80134644-80134663 None:intergenic 40.0%
ATTGAGGAGGTTATACAAGC+TGG + chr7_3:80134644-80134663 Msa1128270:CDS 40.0%
AAGATAATAACCTGCAGCTG+TGG - chr7_3:80134713-80134732 None:intergenic 40.0%
ACTAAGGTAGTAATTGAGGC+AGG + chr7_3:80134859-80134878 Msa1128270:CDS 40.0%
GCAAGGAGCTTCACAAAAAT+TGG - chr7_3:80134892-80134911 None:intergenic 40.0%
TGTTCACGAACATCATCACT+AGG - chr7_3:80134919-80134938 None:intergenic 40.0%
! TAGTGATGATGTTCGTGAAC+AGG + chr7_3:80134918-80134937 Msa1128270:CDS 40.0%
AGTCAAGCTAAACATTCCTC+CGG - chr7_3:80135062-80135081 None:intergenic 40.0%
CACTATTATGCATGCAAGTG+AGG + chr7_3:80135159-80135178 Msa1128270:intron 40.0%
ACATTGCCTTGCAATAGTGT+TGG + chr7_3:80135255-80135274 Msa1128270:intron 40.0%
AACATCTTTCCTGTGTTGTG+TGG + chr7_3:80135311-80135330 Msa1128270:intron 40.0%
AAGCCCATTTGTGTACCAAA+TGG - chr7_3:80135622-80135641 None:intergenic 40.0%
TTTCAGTCACATGACAACAC+AGG - chr7_3:80135945-80135964 None:intergenic 40.0%
TGTGTTGTCATGTGACTGAA+AGG + chr7_3:80135944-80135963 Msa1128270:intron 40.0%
AACAGCCTCTTGTGTATAAC+AGG + chr7_3:80135987-80136006 Msa1128270:intron 40.0%
ACAGCCTCTTGTGTATAACA+GGG + chr7_3:80135988-80136007 Msa1128270:intron 40.0%
CTTACCCTGTTATACACAAG+AGG - chr7_3:80135995-80136014 None:intergenic 40.0%
CTCTTGTGTATAACAGGGTA+AGG + chr7_3:80135993-80136012 Msa1128270:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr7_3:80136019-80136038 Msa1128270:intron 40.0%
CTAATTGTTAGCTCCATCCT+TGG + chr7_3:80136112-80136131 Msa1128270:intron 40.0%
AAGACTGGTAAAACCAAGGA+TGG - chr7_3:80136128-80136147 None:intergenic 40.0%
!! AAGATATGAAAGTGCCCAAC+AGG - chr7_3:80136305-80136324 None:intergenic 40.0%
ATTCAAGGCGTAATTGAAGC+TGG + chr7_3:80136346-80136365 Msa1128270:CDS 40.0%
! CTGTTCAAAGTTGTTTCCCT+TGG + chr7_3:80136425-80136444 Msa1128270:intron 40.0%
GAATAAGCACAGAAGGAGAT+GGG - chr7_3:80136498-80136517 None:intergenic 40.0%
GAAACTGTGAAGGAGATAGT+GGG - chr7_3:80136853-80136872 None:intergenic 40.0%
AGAAACTGTGAAGGAGATAG+TGG - chr7_3:80136854-80136873 None:intergenic 40.0%
TCATAAGGAGGAAAGAGACA+TGG - chr7_3:80136943-80136962 None:intergenic 40.0%
ATCAAGCACATGATTCGTGA+TGG - chr7_3:80136992-80137011 None:intergenic 40.0%
TAAGAGAAGGAAGAACTCGA+TGG - chr7_3:80137079-80137098 None:intergenic 40.0%
ACAATTTCGAACATCACAGC+TGG + chr7_3:80137152-80137171 Msa1128270:CDS 40.0%
CAATTTCGAACATCACAGCT+GGG + chr7_3:80137153-80137172 Msa1128270:CDS 40.0%
! ACAGATTCAGGTTTGTGCAT+TGG + chr7_3:80137184-80137203 Msa1128270:intron 40.0%
! CAGATTCAGGTTTGTGCATT+GGG + chr7_3:80137185-80137204 Msa1128270:intron 40.0%
TGCCAGTATAATTGGTCCTT+TGG + chr7_3:80137293-80137312 Msa1128270:CDS 40.0%
GACCAAAGGACCAATTATAC+TGG - chr7_3:80137298-80137317 None:intergenic 40.0%
GGCAATCTCAAATGCTACAT+CGG + chr7_3:80137365-80137384 Msa1128270:CDS 40.0%
GCAATCTCAAATGCTACATC+GGG + chr7_3:80137366-80137385 Msa1128270:CDS 40.0%
CATGTGAGTAGATCACACAA+GGG - chr7_3:80137544-80137563 None:intergenic 40.0%
ACATGTGAGTAGATCACACA+AGG - chr7_3:80137545-80137564 None:intergenic 40.0%
AGACAAACTGTCACAATCCT+AGG - chr7_3:80137574-80137593 None:intergenic 40.0%
TGAAATGATTGACGAAGCTG+AGG + chr7_3:80137672-80137691 Msa1128270:CDS 40.0%
GAAATGATTGACGAAGCTGA+GGG + chr7_3:80137673-80137692 Msa1128270:CDS 40.0%
TGAAGATTCTCGAGACATAC+TGG + chr7_3:80137755-80137774 Msa1128270:CDS 40.0%
TCTCAATCAGGGTTCAACTT+TGG + chr7_3:80137817-80137836 Msa1128270:CDS 40.0%
ACAATACAGGATAACACGAG+AGG - chr7_3:80137986-80138005 None:intergenic 40.0%
!! TGTTCTTTAAGGTTCAGCCT+TGG + chr7_3:80138124-80138143 Msa1128270:three_prime_UTR 40.0%
AAGGTTCAGCCTTGGTAAAT+AGG + chr7_3:80138132-80138151 Msa1128270:three_prime_UTR 40.0%
!!! TGGCTGGTTTTACATACAAC+AGG + chr7_3:80138184-80138203 Msa1128270:three_prime_UTR 40.0%
!!! GGCTGGTTTTACATACAACA+GGG + chr7_3:80138185-80138204 Msa1128270:three_prime_UTR 40.0%
!!! GCTGGTTTTACATACAACAG+GGG + chr7_3:80138186-80138205 Msa1128270:three_prime_UTR 40.0%
AGCGTACCACTTATGATTCT+AGG + chr7_3:80138354-80138373 Msa1128270:three_prime_UTR 40.0%
GCAGGGTTGAAGAGTGAAAT+TGG - chr7_3:80133522-80133541 None:intergenic 45.0%
GAGTGAGGGTTTGAAAAGAG+AGG - chr7_3:80133568-80133587 None:intergenic 45.0%
AGTGAAAGAGCGAAGCAGAA+AGG - chr7_3:80133590-80133609 None:intergenic 45.0%
TGGTTGAGATCCGGAAGAAT+CGG + chr7_3:80133785-80133804 Msa1128270:CDS 45.0%
TTTCTTCCCTCCGATTCTTC+CGG - chr7_3:80133798-80133817 None:intergenic 45.0%
! GTAGGGGTGTGCATAAAAAC+TGG - chr7_3:80134219-80134238 None:intergenic 45.0%
CCCATCTGTATGTAGCTACA+AGG + chr7_3:80134359-80134378 Msa1128270:intron 45.0%
AGTCCAGATTCCTGTAACCA+AGG - chr7_3:80134465-80134484 None:intergenic 45.0%
GTATAACCTCCTCAATCGGT+GGG - chr7_3:80134640-80134659 None:intergenic 45.0%
TGTATAACCTCCTCAATCGG+TGG - chr7_3:80134641-80134660 None:intergenic 45.0%
! TGTTGTAGTTTGAGGCAGCA+TGG + chr7_3:80134800-80134819 Msa1128270:intron 45.0%
! GTTGTAGTTTGAGGCAGCAT+GGG + chr7_3:80134801-80134820 Msa1128270:intron 45.0%
CATCATCACTAGGAGAAGCA+AGG - chr7_3:80134909-80134928 None:intergenic 45.0%
GATGGTCCAACACTATTGCA+AGG - chr7_3:80135264-80135283 None:intergenic 45.0%
AACATTTCCCAATGCCCACA+CGG - chr7_3:80135346-80135365 None:intergenic 45.0%
AGAACAAGATCACGGCATCT+AGG - chr7_3:80135381-80135400 None:intergenic 45.0%
AGATGCCGTGATCTTGTTCT+CGG + chr7_3:80135381-80135400 Msa1128270:CDS 45.0%
CATGACCGAGAACAAGATCA+CGG - chr7_3:80135389-80135408 None:intergenic 45.0%
TCATTCAATTGCGCCAACAG+AGG - chr7_3:80135423-80135442 None:intergenic 45.0%
!! GAAGTTTGAGAGTGTCCATG+TGG - chr7_3:80135475-80135494 None:intergenic 45.0%
GACACTCTCAAACTTCTGCA+GGG + chr7_3:80135479-80135498 Msa1128270:CDS 45.0%
ACACTCTCAAACTTCTGCAG+GGG + chr7_3:80135480-80135499 Msa1128270:CDS 45.0%
ACCTGATCAAAAGCAGGTTG+TGG - chr7_3:80135510-80135529 None:intergenic 45.0%
! GCAGCTGTGTTGTTCTTTAG+TGG + chr7_3:80135860-80135879 Msa1128270:intron 45.0%
! ATACACAAGAGGCTGTTTCC+AGG - chr7_3:80135984-80136003 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr7_3:80136015-80136034 Msa1128270:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr7_3:80136018-80136037 Msa1128270:intron 45.0%
AGCATGAAAAAGGGACAACC+CGG - chr7_3:80136085-80136104 None:intergenic 45.0%
AGCTCTGCGAGCATGAAAAA+GGG - chr7_3:80136094-80136113 None:intergenic 45.0%
! TAGCTCTGCGAGCATGAAAA+AGG - chr7_3:80136095-80136114 None:intergenic 45.0%
TGCAGGTTTAACCTGTAAGC+AGG - chr7_3:80136227-80136246 None:intergenic 45.0%
AAGTCTTGACTGATGCCTGT+TGG + chr7_3:80136287-80136306 Msa1128270:CDS 45.0%
AGTCTTGACTGATGCCTGTT+GGG + chr7_3:80136288-80136307 Msa1128270:CDS 45.0%
ACAGTAGAAGCTCAACAAGC+CGG - chr7_3:80136381-80136400 None:intergenic 45.0%
! GCTTGTTGAGCTTCTACTGT+GGG + chr7_3:80136381-80136400 Msa1128270:intron 45.0%
GGAATAAGCACAGAAGGAGA+TGG - chr7_3:80136499-80136518 None:intergenic 45.0%
AGAGCAGGAATAAGCACAGA+AGG - chr7_3:80136505-80136524 None:intergenic 45.0%
! AACTAGCAGAGCTGATTCAC+CGG + chr7_3:80136775-80136794 Msa1128270:intron 45.0%
TGGTAGCTTAAGAACTGAGC+CGG - chr7_3:80136797-80136816 None:intergenic 45.0%
!! GTGAAGGAGATAGTGGGAAA+TGG - chr7_3:80136847-80136866 None:intergenic 45.0%
ACATGGCTGCAAGATATGAG+AGG - chr7_3:80136900-80136919 None:intergenic 45.0%
!! GTGTTAATGGGGTGCTTTTC+TGG + chr7_3:80137038-80137057 Msa1128270:intron 45.0%
TGGGAACAAGCAACAGATTC+AGG + chr7_3:80137172-80137191 Msa1128270:CDS 45.0%
ATATCAAGAAGGAAGCAGCC+TGG + chr7_3:80137343-80137362 Msa1128270:CDS 45.0%
TATCAAGAAGGAAGCAGCCT+GGG + chr7_3:80137344-80137363 Msa1128270:CDS 45.0%
! TGTAGCATTTGAGATTGCCC+AGG - chr7_3:80137364-80137383 None:intergenic 45.0%
ATCTCAAATGCTACATCGGG+TGG + chr7_3:80137369-80137388 Msa1128270:CDS 45.0%
! ATGTTCCCCGGTGATTTTGT+TGG + chr7_3:80137435-80137454 Msa1128270:intron 45.0%
TAAATTGGTCGACAGGTACC+TGG + chr7_3:80137498-80137517 Msa1128270:intron 45.0%
ACAGGTACCTGGTAAGTCAA+GGG + chr7_3:80137509-80137528 Msa1128270:intron 45.0%
TAATGCACCCTTGACTTACC+AGG - chr7_3:80137519-80137538 None:intergenic 45.0%
TACTCACATGTCCTGATCCT+AGG + chr7_3:80137554-80137573 Msa1128270:CDS 45.0%
ACTGTCACAATCCTAGGATC+AGG - chr7_3:80137568-80137587 None:intergenic 45.0%
GGGGAAGCTGATAAAAATGC+CGG + chr7_3:80137622-80137641 Msa1128270:CDS 45.0%
AAAAATGCCGGCATCACTGA+TGG + chr7_3:80137634-80137653 Msa1128270:CDS 45.0%
TCTCAGTGTTGTCATGACTC+TGG - chr7_3:80137720-80137739 None:intergenic 45.0%
GATTCTCGAGACATACTGGT+TGG + chr7_3:80137759-80137778 Msa1128270:CDS 45.0%
CAGGTGATGCTTCTCAATCA+GGG + chr7_3:80137806-80137825 Msa1128270:CDS 45.0%
CAATCAGGGTTCAACTTTGG+TGG + chr7_3:80137820-80137839 Msa1128270:CDS 45.0%
!! TTTTAGCTGGTCCATCAGTG+AGG + chr7_3:80138041-80138060 Msa1128270:three_prime_UTR 45.0%
ATACTGGAGAACCTCACTGA+TGG - chr7_3:80138055-80138074 None:intergenic 45.0%
ATCAGTGAGGTTCTCCAGTA+TGG + chr7_3:80138054-80138073 Msa1128270:three_prime_UTR 45.0%
AGTATGGCAGTTCGACAGTT+GGG + chr7_3:80138070-80138089 Msa1128270:three_prime_UTR 45.0%
CAGTAACGGCCTATTTACCA+AGG - chr7_3:80138144-80138163 None:intergenic 45.0%
CTTGGTAAATAGGCCGTTAC+TGG + chr7_3:80138142-80138161 Msa1128270:three_prime_UTR 45.0%
TAAATAGGCCGTTACTGGAC+CGG + chr7_3:80138147-80138166 Msa1128270:three_prime_UTR 45.0%
AGCCATTTCAAAACCCAAGC+CGG - chr7_3:80138169-80138188 None:intergenic 45.0%
ACATACAACAGGGGAACAGT+TGG + chr7_3:80138195-80138214 Msa1128270:three_prime_UTR 45.0%
CATACAACAGGGGAACAGTT+GGG + chr7_3:80138196-80138215 Msa1128270:three_prime_UTR 45.0%
AGCGAAGCAGAAAGGAGTGA+GGG - chr7_3:80133582-80133601 None:intergenic 50.0%
!! GTATCGATTCCGACGAACCT+CGG - chr7_3:80133716-80133735 None:intergenic 50.0%
GGTTCGTCGGAATCGATACA+AGG + chr7_3:80133717-80133736 Msa1128270:CDS 50.0%
TCGTCGGAATCGATACAAGG+TGG + chr7_3:80133720-80133739 Msa1128270:CDS 50.0%
TCGGAATCGATACAAGGTGG+CGG + chr7_3:80133723-80133742 Msa1128270:CDS 50.0%
! ATACAAGGTGGCGGTTGATG+CGG + chr7_3:80133732-80133751 Msa1128270:CDS 50.0%
GAGACGGAGAGAGGATAACT+TGG + chr7_3:80133765-80133784 Msa1128270:CDS 50.0%
TTGAGATCCGGAAGAATCGG+AGG + chr7_3:80133788-80133807 Msa1128270:CDS 50.0%
TGAGATCCGGAAGAATCGGA+GGG + chr7_3:80133789-80133808 Msa1128270:CDS 50.0%
! TTGCAGAAGAAGAGGCGTGA+AGG + chr7_3:80133820-80133839 Msa1128270:CDS 50.0%
TTCCTGTAACCAAGGCTGGT+AGG - chr7_3:80134457-80134476 None:intergenic 50.0%
CAGATTCCTGTAACCAAGGC+TGG - chr7_3:80134461-80134480 None:intergenic 50.0%
CAGCCTTGGTTACAGGAATC+TGG + chr7_3:80134459-80134478 Msa1128270:CDS 50.0%
! GGAAGATTTTCCACAGCTGC+AGG + chr7_3:80134700-80134719 Msa1128270:CDS 50.0%
!! TGGGCATTGGGAAATGTTGC+TGG + chr7_3:80135348-80135367 Msa1128270:CDS 50.0%
CGTGATCTTGTTCTCGGTCA+TGG + chr7_3:80135387-80135406 Msa1128270:CDS 50.0%
TGGAGCTTTGCTTCCTCTGT+TGG + chr7_3:80135407-80135426 Msa1128270:CDS 50.0%
CTATGCTCAGAAACGCCACA+TGG + chr7_3:80135457-80135476 Msa1128270:CDS 50.0%
GGACACTCTCAAACTTCTGC+AGG + chr7_3:80135478-80135497 Msa1128270:CDS 50.0%
!! GCCACAACCTGCTTTTGATC+AGG + chr7_3:80135506-80135525 Msa1128270:CDS 50.0%
AAGGTCACGTGTTCAAGTCC+TGG + chr7_3:80135963-80135982 Msa1128270:intron 50.0%
TAACCTGTAAGCAGGCAGGA+TGG - chr7_3:80136219-80136238 None:intergenic 50.0%
GGTTTAACCTGTAAGCAGGC+AGG - chr7_3:80136223-80136242 None:intergenic 50.0%
TTGAAGCTGGTGTCTGTAGC+CGG + chr7_3:80136359-80136378 Msa1128270:CDS 50.0%
!! GGCTTGTTGAGCTTCTACTG+TGG + chr7_3:80136380-80136399 Msa1128270:intron 50.0%
TAAGCACAGAAGGAGATGGG+TGG - chr7_3:80136495-80136514 None:intergenic 50.0%
ATTCCTGCTCTACGCACAGT+TGG + chr7_3:80136514-80136533 Msa1128270:CDS 50.0%
TTTCCAACTGTGCGTAGAGC+AGG - chr7_3:80136520-80136539 None:intergenic 50.0%
! TGGAGATGACTTGCAGACAC+AGG + chr7_3:80136549-80136568 Msa1128270:CDS 50.0%
GCATGGAGGAAATCGTCTGT+AGG + chr7_3:80136696-80136715 Msa1128270:intron 50.0%
GGACGGCATAGAAACTGTGA+AGG - chr7_3:80136863-80136882 None:intergenic 50.0%
!! CTCGATGGTTGATGATGACC+TGG - chr7_3:80137064-80137083 None:intergenic 50.0%
GCATCAAGAAGGAAGCTTGC+TGG + chr7_3:80137129-80137148 Msa1128270:CDS 50.0%
GACAGGTACCTGGTAAGTCA+AGG + chr7_3:80137508-80137527 Msa1128270:intron 50.0%
ATTCACGCCATCAGTGATGC+CGG - chr7_3:80137644-80137663 None:intergenic 50.0%
! GCATCACTGATGGCGTGAAT+CGG + chr7_3:80137644-80137663 Msa1128270:CDS 50.0%
GATTGACGAAGCTGAGGGTT+TGG + chr7_3:80137678-80137697 Msa1128270:CDS 50.0%
CAGTGTTGTCATGACTCTGG+AGG - chr7_3:80137717-80137736 None:intergenic 50.0%
! TCTCGAGACATACTGGTTGG+AGG + chr7_3:80137762-80137781 Msa1128270:CDS 50.0%
!! GATTGAGAAGCATCACCTGG+AGG - chr7_3:80137805-80137824 None:intergenic 50.0%
!! CCTGATTGAGAAGCATCACC+TGG - chr7_3:80137808-80137827 None:intergenic 50.0%
CCAGGTGATGCTTCTCAATC+AGG + chr7_3:80137805-80137824 Msa1128270:CDS 50.0%
GTTGAATCCACCAGAAGGCA+CGG - chr7_3:80137860-80137879 None:intergenic 50.0%
CAACTGTCGAACTGCCATAC+TGG - chr7_3:80138071-80138090 None:intergenic 50.0%
CAGTATGGCAGTTCGACAGT+TGG + chr7_3:80138069-80138088 Msa1128270:three_prime_UTR 50.0%
GTATGGCAGTTCGACAGTTG+GGG + chr7_3:80138071-80138090 Msa1128270:three_prime_UTR 50.0%
TATGGCAGTTCGACAGTTGG+GGG + chr7_3:80138072-80138091 Msa1128270:three_prime_UTR 50.0%
!!! GACCGGCTTGGGTTTTGAAA+TGG + chr7_3:80138164-80138183 Msa1128270:three_prime_UTR 50.0%
!!! GGCTTGGGTTTTGAAATGGC+TGG + chr7_3:80138168-80138187 Msa1128270:three_prime_UTR 50.0%
TCGGAAGTGGCAAGAAAAGC+CGG - chr7_3:80138227-80138246 None:intergenic 50.0%
GAGCGAAGCAGAAAGGAGTG+AGG - chr7_3:80133583-80133602 None:intergenic 55.0%
TCGGTTCTCGCGTTTGCGTT+AGG - chr7_3:80133697-80133716 None:intergenic 55.0%
TAACGCAAACGCGAGAACCG+AGG + chr7_3:80133696-80133715 Msa1128270:CDS 55.0%
! CGGTTGATGCGGAAGAAGGT+CGG + chr7_3:80133743-80133762 Msa1128270:CDS 55.0%
ATGCGGAAGAAGGTCGGAGA+CGG + chr7_3:80133749-80133768 Msa1128270:CDS 55.0%
ACTGATGCAGGCATCTGCTG+AGG - chr7_3:80133853-80133872 None:intergenic 55.0%
GTTGGAACACCTACCAGCCT+TGG + chr7_3:80134445-80134464 Msa1128270:intron 55.0%
CACCTACCAGCCTTGGTTAC+AGG + chr7_3:80134452-80134471 Msa1128270:CDS 55.0%
!! TCAATCGGTGGGCTACGTTC+TGG - chr7_3:80134629-80134648 None:intergenic 55.0%
! AGAACGTAGCCCACCGATTG+AGG + chr7_3:80134628-80134647 Msa1128270:intron 55.0%
CCTGACAGTCCACACAACAC+AGG - chr7_3:80135323-80135342 None:intergenic 55.0%
! CCTGTGTTGTGTGGACTGTC+AGG + chr7_3:80135320-80135339 Msa1128270:intron 55.0%
CTTGAGCTCCCGCATATGCA+GGG - chr7_3:80136058-80136077 None:intergenic 55.0%
ACTTGAGCTCCCGCATATGC+AGG - chr7_3:80136059-80136078 None:intergenic 55.0%
CTACCATCCTGCCTGCTTAC+AGG + chr7_3:80136213-80136232 Msa1128270:intron 55.0%
TGGATGAGACTGGCAAGTGC+AGG - chr7_3:80136253-80136272 None:intergenic 55.0%
!! AATGGGGTGCTTTTCTGGCC+AGG + chr7_3:80137043-80137062 Msa1128270:intron 55.0%
CTGGTTGGAGGAAGATGACG+AGG + chr7_3:80137774-80137793 Msa1128270:CDS 55.0%
! AGAAGGCACGGCAGGAACAT+CGG - chr7_3:80137848-80137867 None:intergenic 55.0%
ATGGCAGTTCGACAGTTGGG+GGG + chr7_3:80138073-80138092 Msa1128270:three_prime_UTR 55.0%
AACCCAAGCCGGTCCAGTAA+CGG - chr7_3:80138158-80138177 None:intergenic 55.0%
AACAGGGGAACAGTTGGGTG+TGG + chr7_3:80138201-80138220 Msa1128270:three_prime_UTR 55.0%
!! ACGCTGACTCCAACCTTAGC+AGG - chr7_3:80138339-80138358 None:intergenic 55.0%
ACGCGAGAACCGAGGTTCGT+CGG + chr7_3:80133704-80133723 Msa1128270:CDS 60.0%
! GTGGCGGTTGATGCGGAAGA+AGG + chr7_3:80133739-80133758 Msa1128270:CDS 60.0%
AGAAGGTCGGAGACGGAGAG+AGG + chr7_3:80133756-80133775 Msa1128270:CDS 60.0%
! ACGTAGCCCACCGATTGAGG+AGG + chr7_3:80134631-80134650 Msa1128270:CDS 60.0%
! TGTGGACTGTCAGGCCGTGT+GGG + chr7_3:80135329-80135348 Msa1128270:intron 60.0%
TGTCAGGCCGTGTGGGCATT+GGG + chr7_3:80135336-80135355 Msa1128270:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr7_3:80136031-80136050 Msa1128270:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr7_3:80136046-80136065 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr7_3:80136047-80136066 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr7_3:80136046-80136065 Msa1128270:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr7_3:80136047-80136066 Msa1128270:intron 60.0%
ATGCGGGAGCTCAAGTGCAC+CGG + chr7_3:80136063-80136082 Msa1128270:intron 60.0%
! CTGGCAAGTGCAGGAAGTGC+AGG - chr7_3:80136244-80136263 None:intergenic 60.0%
GATGACGAGGCTATGCCTCC+AGG + chr7_3:80137787-80137806 Msa1128270:CDS 60.0%
GATGTTCCTGCCGTGCCTTC+TGG + chr7_3:80137847-80137866 Msa1128270:CDS 60.0%
! AATCCACCAGAAGGCACGGC+AGG - chr7_3:80137856-80137875 None:intergenic 60.0%
! GTGTGGACTGTCAGGCCGTG+TGG + chr7_3:80135328-80135347 Msa1128270:intron 65.0%
CTGTCAGGCCGTGTGGGCAT+TGG + chr7_3:80135335-80135354 Msa1128270:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr7_3:80136033-80136052 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr7_3:80136048-80136067 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr7_3:80136052-80136071 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr7_3:80136053-80136072 None:intergenic 65.0%
TGCGGGAGCTCAAGTGCACC+GGG + chr7_3:80136064-80136083 Msa1128270:intron 65.0%
GTTCCTGCCGTGCCTTCTGG+TGG + chr7_3:80137850-80137869 Msa1128270:CDS 65.0%
AGGCCGTTACTGGACCGGCT+TGG + chr7_3:80138152-80138171 Msa1128270:three_prime_UTR 65.0%
! GGCCGTTACTGGACCGGCTT+GGG + chr7_3:80138153-80138172 Msa1128270:three_prime_UTR 65.0%
GGGGAACAGTTGGGTGTGGC+CGG + chr7_3:80138205-80138224 Msa1128270:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 80133483 80138583 80133483 ID=Msa1128270;Name=Msa1128270
chr7_3 mRNA 80133483 80138583 80133483 ID=Msa1128270-mRNA-1;Parent=Msa1128270;Name=Msa1128270-mRNA-1;_AED=0.07;_eAED=0.07;_QI=199|1|1|1|0.9|0.90|11|568|532
chr7_3 exon 80133483 80133897 80133483 ID=Msa1128270-mRNA-1:exon:22786;Parent=Msa1128270-mRNA-1
chr7_3 exon 80134446 80134542 80134446 ID=Msa1128270-mRNA-1:exon:22787;Parent=Msa1128270-mRNA-1
chr7_3 exon 80134630 80134721 80134630 ID=Msa1128270-mRNA-1:exon:22788;Parent=Msa1128270-mRNA-1
chr7_3 exon 80134808 80134939 80134808 ID=Msa1128270-mRNA-1:exon:22789;Parent=Msa1128270-mRNA-1
chr7_3 exon 80135342 80135527 80135342 ID=Msa1128270-mRNA-1:exon:22790;Parent=Msa1128270-mRNA-1
chr7_3 exon 80136235 80136398 80136235 ID=Msa1128270-mRNA-1:exon:22791;Parent=Msa1128270-mRNA-1
chr7_3 exon 80136492 80136570 80136492 ID=Msa1128270-mRNA-1:exon:22792;Parent=Msa1128270-mRNA-1
chr7_3 exon 80137065 80137193 80137065 ID=Msa1128270-mRNA-1:exon:22793;Parent=Msa1128270-mRNA-1
chr7_3 exon 80137282 80137409 80137282 ID=Msa1128270-mRNA-1:exon:22794;Parent=Msa1128270-mRNA-1
chr7_3 exon 80137513 80137910 80137513 ID=Msa1128270-mRNA-1:exon:22795;Parent=Msa1128270-mRNA-1
chr7_3 exon 80138038 80138583 80138038 ID=Msa1128270-mRNA-1:exon:22796;Parent=Msa1128270-mRNA-1
chr7_3 five_prime_UTR 80133483 80133681 80133483 ID=Msa1128270-mRNA-1:five_prime_utr;Parent=Msa1128270-mRNA-1
chr7_3 CDS 80133682 80133897 80133682 ID=Msa1128270-mRNA-1:cds;Parent=Msa1128270-mRNA-1
chr7_3 CDS 80134446 80134542 80134446 ID=Msa1128270-mRNA-1:cds;Parent=Msa1128270-mRNA-1
chr7_3 CDS 80134630 80134721 80134630 ID=Msa1128270-mRNA-1:cds;Parent=Msa1128270-mRNA-1
chr7_3 CDS 80134808 80134939 80134808 ID=Msa1128270-mRNA-1:cds;Parent=Msa1128270-mRNA-1
chr7_3 CDS 80135342 80135527 80135342 ID=Msa1128270-mRNA-1:cds;Parent=Msa1128270-mRNA-1
chr7_3 CDS 80136235 80136398 80136235 ID=Msa1128270-mRNA-1:cds;Parent=Msa1128270-mRNA-1
chr7_3 CDS 80136492 80136570 80136492 ID=Msa1128270-mRNA-1:cds;Parent=Msa1128270-mRNA-1
chr7_3 CDS 80137065 80137193 80137065 ID=Msa1128270-mRNA-1:cds;Parent=Msa1128270-mRNA-1
chr7_3 CDS 80137282 80137409 80137282 ID=Msa1128270-mRNA-1:cds;Parent=Msa1128270-mRNA-1
chr7_3 CDS 80137513 80137888 80137513 ID=Msa1128270-mRNA-1:cds;Parent=Msa1128270-mRNA-1
chr7_3 three_prime_UTR 80137889 80137910 80137889 ID=Msa1128270-mRNA-1:three_prime_utr;Parent=Msa1128270-mRNA-1
chr7_3 three_prime_UTR 80138038 80138583 80138038 ID=Msa1128270-mRNA-1:three_prime_utr;Parent=Msa1128270-mRNA-1
Gene Sequence

>Msa1128270

ATGTCGTATCGTCCTAACGCAAACGCGAGAACCGAGGTTCGTCGGAATCGATACAAGGTGGCGGTTGATGCGGAAGAAGGTCGGAGACGGAGAGAGGATAACTTGGTTGAGATCCGGAAGAATCGGAGGGAAGAAAGCTTGCAGAAGAAGAGGCGTGAAGGACTTCAACCTCAGCAGATGCCTGCATCAGTTCAATCTAATCTACTCGAGAAAAAGTTGGAACACCTACCAGCCTTGGTTACAGGAATCTGGACTGATGATAATAACATGCAGTTTGAGGCAACAACTCAGTTTCGGAAGTTGCTTTCAATTGAACGTAGCCCACCGATTGAGGAGGTTATACAAGCTGGTGTAGTTCCTCGTTTTATTGAGTTCTTGATGAGGGAAGATTTTCCACAGCTGCAGTTTGAGGCAGCATGGGCTTTGACAAATATAGCTTCTGGAACATCTGAAAACACTAAGGTAGTAATTGAGGCAGGTGCTGTACCAATTTTTGTGAAGCTCCTTGCTTCTCCTAGTGATGATGTTCGTGAACAGGCCGTGTGGGCATTGGGAAATGTTGCTGGAGATTCACCTAGATGCCGTGATCTTGTTCTCGGTCATGGAGCTTTGCTTCCTCTGTTGGCGCAATTGAATGAGCATGCCAAACTTTCTATGCTCAGAAACGCCACATGGACACTCTCAAACTTCTGCAGGGGAAAGCCACAACCTGCTTTTGATCAGGTTAAACCTGCACTTCCTGCACTTGCCAGTCTCATCCATTCAAATGATGAAGAAGTCTTGACTGATGCCTGTTGGGCACTTTCATATCTTTCTGATGGTGCAAATGACAAAATTCAAGGCGTAATTGAAGCTGGTGTCTGTAGCCGGCTTGTTGAGCTTCTACTCCACCCATCTCCTTCTGTGCTTATTCCTGCTCTACGCACAGTTGGAAATATTGTCACTGGAGATGACTTGCAGACACAGGTCATCATCAACCATCGAGTTCTTCCTTCTCTTAAGAACCTCTTGATTAATAGTTATAAAAAAAGCATCAAGAAGGAAGCTTGCTGGACAATTTCGAACATCACAGCTGGGAACAAGCAACAGATTCAGGATGTGATTGATGCCAGTATAATTGGTCCTTTGGTCAACTTGCTTCAAAATGCTGAGTTTGATATCAAGAAGGAAGCAGCCTGGGCAATCTCAAATGCTACATCGGGTGGATCTCATGAACAACTCAAGTACCTGGTAAGTCAAGGGTGCATTAAGCCCTTGTGTGATCTACTCACATGTCCTGATCCTAGGATTGTGACAGTTTGTCTTGAAGGGCTTGAAAACATCTTAAAGGTAGGGGAAGCTGATAAAAATGCCGGCATCACTGATGGCGTGAATCGGTATGCTGAAATGATTGACGAAGCTGAGGGTTTGGAGAAAATTGAGAACCTCCAGAGTCATGACAACACTGAGATTTATGAAAAGGCTGTGAAGATTCTCGAGACATACTGGTTGGAGGAAGATGACGAGGCTATGCCTCCAGGTGATGCTTCTCAATCAGGGTTCAACTTTGGTGGCTCCGATGTTCCTGCCGTGCCTTCTGGTGGATTCAACTTTAACTAG

Protein sequence

>Msa1128270

MSYRPNANARTEVRRNRYKVAVDAEEGRRRREDNLVEIRKNRREESLQKKRREGLQPQQMPASVQSNLLEKKLEHLPALVTGIWTDDNNMQFEATTQFRKLLSIERSPPIEEVIQAGVVPRFIEFLMREDFPQLQFEAAWALTNIASGTSENTKVVIEAGAVPIFVKLLASPSDDVREQAVWALGNVAGDSPRCRDLVLGHGALLPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPAFDQVKPALPALASLIHSNDEEVLTDACWALSYLSDGANDKIQGVIEAGVCSRLVELLLHPSPSVLIPALRTVGNIVTGDDLQTQVIINHRVLPSLKNLLINSYKKSIKKEACWTISNITAGNKQQIQDVIDASIIGPLVNLLQNAEFDIKKEAAWAISNATSGGSHEQLKYLVSQGCIKPLCDLLTCPDPRIVTVCLEGLENILKVGEADKNAGITDGVNRYAEMIDEAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEDDEAMPPGDASQSGFNFGGSDVPAVPSGGFNFN*