Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051620 | XP_003589236.1 | 98.561 | 417 | 6 | 0 | 1 | 417 | 1 | 417 | 0.0 | 852 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051620 | sp|O48723|PLP2_ARATH | 66.329 | 395 | 128 | 4 | 12 | 405 | 10 | 400 | 0.0 | 527 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051620 | G7I4H1 | 98.561 | 417 | 6 | 0 | 1 | 417 | 1 | 417 | 0.0 | 852 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000800 | Msa0051620 | 0.804805 | 1.810610e-49 | -8.615850e-47 |
| Msa0002690 | Msa0051620 | -0.801489 | 8.788079e-49 | -8.615850e-47 |
| Msa0002700 | Msa0051620 | -0.809001 | 2.347817e-50 | -8.615850e-47 |
| Msa0026420 | Msa0051620 | 0.972168 | 2.500017e-134 | -8.615850e-47 |
| Msa0027020 | Msa0051620 | -0.800522 | 1.385401e-48 | -8.615850e-47 |
| Msa0034540 | Msa0051620 | 0.819039 | 1.431354e-52 | -8.615850e-47 |
| Msa0035790 | Msa0051620 | 0.837002 | 6.718595e-57 | -8.615850e-47 |
| Msa0039890 | Msa0051620 | 0.805111 | 1.562589e-49 | -8.615850e-47 |
| Msa0046680 | Msa0051620 | 0.846337 | 2.313518e-59 | -8.615850e-47 |
| Msa0051480 | Msa0051620 | 0.852411 | 4.700234e-61 | -8.615850e-47 |
| Msa0051620 | Msa0051730 | 0.989652 | 4.731371e-179 | -8.615850e-47 |
| Msa0051620 | Msa0054110 | -0.800119 | 1.673482e-48 | -8.615850e-47 |
| Msa0051620 | Msa0064990 | 0.801194 | 1.010188e-48 | -8.615850e-47 |
| Msa0051620 | Msa0074860 | -0.818129 | 2.302265e-52 | -8.615850e-47 |
| Msa0051620 | Msa0083890 | 0.844933 | 5.560759e-59 | -8.615850e-47 |
| Msa0051620 | Msa0087550 | 0.810218 | 1.285488e-50 | -8.615850e-47 |
| Msa0051620 | Msa0087900 | 0.808476 | 3.039231e-50 | -8.615850e-47 |
| Msa0051620 | Msa0095910 | 0.806072 | 9.823621e-50 | -8.615850e-47 |
| Msa0051620 | Msa0107830 | 0.827486 | 1.523909e-54 | -8.615850e-47 |
| Msa0051620 | Msa0129290 | 0.838252 | 3.211916e-57 | -8.615850e-47 |
| Msa0051620 | Msa0134270 | 0.811683 | 6.192796e-51 | -8.615850e-47 |
| Msa0051620 | Msa0143640 | 0.885956 | 5.197874e-72 | -8.615850e-47 |
| Msa0051620 | Msa0146090 | 0.986728 | 9.108564e-168 | -8.615850e-47 |
| Msa0051620 | Msa0146200 | 0.851922 | 6.472462e-61 | -8.615850e-47 |
| Msa0051620 | Msa0150620 | 0.818720 | 1.691352e-52 | -8.615850e-47 |
| Msa0051620 | Msa0162680 | 0.843466 | 1.377377e-58 | -8.615850e-47 |
| Msa0051620 | Msa0163170 | -0.805547 | 1.266188e-49 | -8.615850e-47 |
| Msa0051620 | Msa0163540 | -0.812210 | 4.754404e-51 | -8.615850e-47 |
| Msa0051620 | Msa0167160 | -0.816561 | 5.189215e-52 | -8.615850e-47 |
| Msa0051620 | Msa0180820 | 0.817838 | 2.678624e-52 | -8.615850e-47 |
| Msa0051620 | Msa0185100 | 0.833087 | 6.523670e-56 | -8.615850e-47 |
| Msa0051620 | Msa0186240 | 0.821312 | 4.316021e-53 | -8.615850e-47 |
| Msa0051620 | Msa0191470 | 0.835366 | 1.749479e-56 | -8.615850e-47 |
| Msa0051620 | Msa0193190 | 0.807136 | 5.856354e-50 | -8.615850e-47 |
| Msa0051620 | Msa0194370 | -0.800084 | 1.701129e-48 | -8.615850e-47 |
| Msa0051620 | Msa0202380 | 0.822885 | 1.864588e-53 | -8.615850e-47 |
| Msa0051620 | Msa0219720 | -0.811895 | 5.569659e-51 | -8.615850e-47 |
| Msa0051620 | Msa0224210 | 0.807620 | 4.624016e-50 | -8.615850e-47 |
| Msa0051620 | Msa0232160 | -0.831753 | 1.396127e-55 | -8.615850e-47 |
| Msa0051620 | Msa0240630 | -0.803700 | 3.076328e-49 | -8.615850e-47 |
| Msa0051620 | Msa0246140 | 0.866215 | 3.355862e-65 | -8.615850e-47 |
| Msa0051620 | Msa0254640 | 0.803729 | 3.033515e-49 | -8.615850e-47 |
| Msa0051620 | Msa0267700 | 0.857637 | 1.425649e-62 | -8.615850e-47 |
| Msa0051620 | Msa0267900 | 0.802794 | 4.736883e-49 | -8.615850e-47 |
| Msa0051620 | Msa0271700 | 0.818952 | 1.498783e-52 | -8.615850e-47 |
| Msa0051620 | Msa0271720 | 0.812762 | 3.601097e-51 | -8.615850e-47 |
| Msa0051620 | Msa0273070 | 0.822931 | 1.818861e-53 | -8.615850e-47 |
| Msa0051620 | Msa0275730 | 0.800643 | 1.308821e-48 | -8.615850e-47 |
| Msa0051620 | Msa0284730 | 0.822061 | 2.897092e-53 | -8.615850e-47 |
| Msa0051620 | Msa0306310 | 0.827761 | 1.308719e-54 | -8.615850e-47 |
| Msa0051620 | Msa0310260 | -0.822162 | 2.745080e-53 | -8.615850e-47 |
| Msa0051620 | Msa0310270 | -0.822218 | 2.665024e-53 | -8.615850e-47 |
| Msa0051620 | Msa0312300 | 0.818777 | 1.642276e-52 | -8.615850e-47 |
| Msa0051620 | Msa0316230 | 0.823556 | 1.299772e-53 | -8.615850e-47 |
| Msa0051620 | Msa0319680 | 0.836933 | 6.998231e-57 | -8.615850e-47 |
| Msa0051620 | Msa0324810 | 0.829868 | 4.044538e-55 | -8.615850e-47 |
| Msa0051620 | Msa0332360 | 0.817903 | 2.589532e-52 | -8.615850e-47 |
| Msa0051620 | Msa0334480 | -0.813065 | 3.091172e-51 | -8.615850e-47 |
| Msa0051620 | Msa0336550 | -0.824005 | 1.020199e-53 | -8.615850e-47 |
| Msa0051620 | Msa0345890 | 0.814731 | 1.327051e-51 | -8.615850e-47 |
| Msa0051620 | Msa0345980 | 0.848316 | 6.626209e-60 | -8.615850e-47 |
| Msa0051620 | Msa0346170 | 0.820812 | 5.628067e-53 | -8.615850e-47 |
| Msa0051620 | Msa0353010 | 0.833468 | 5.240804e-56 | -8.615850e-47 |
| Msa0051620 | Msa0368620 | 0.807779 | 4.277988e-50 | -8.615850e-47 |
| Msa0051620 | Msa0378320 | 0.861931 | 7.250557e-64 | -8.615850e-47 |
| Msa0051620 | Msa0385320 | 0.813924 | 2.000657e-51 | -8.615850e-47 |
| Msa0051620 | Msa0387630 | -0.803433 | 3.494681e-49 | -8.615850e-47 |
| Msa0051620 | Msa0389710 | 0.808374 | 3.196083e-50 | -8.615850e-47 |
| Msa0051620 | Msa0390200 | 0.828486 | 8.751272e-55 | -8.615850e-47 |
| Msa0051620 | Msa0390790 | 0.807574 | 4.730633e-50 | -8.615850e-47 |
| Msa0051620 | Msa0393100 | 0.849310 | 3.511029e-60 | -8.615850e-47 |
| Msa0051620 | Msa0397200 | 0.806086 | 9.755935e-50 | -8.615850e-47 |
| Msa0051620 | Msa0402490 | -0.818643 | 1.761169e-52 | -8.615850e-47 |
| Msa0051620 | Msa0402800 | 0.858588 | 7.433237e-63 | -8.615850e-47 |
| Msa0051620 | Msa0405210 | 0.816307 | 5.916225e-52 | -8.615850e-47 |
| Msa0051620 | Msa0421080 | 0.826918 | 2.083966e-54 | -8.615850e-47 |
| Msa0051620 | Msa0427230 | -0.820638 | 6.170188e-53 | -8.615850e-47 |
| Msa0051620 | Msa0427660 | 0.855533 | 5.920860e-62 | -8.615850e-47 |
| Msa0051620 | Msa0434300 | 0.805625 | 1.219706e-49 | -8.615850e-47 |
| Msa0051620 | Msa0434400 | 0.809361 | 1.965772e-50 | -8.615850e-47 |
| Msa0051620 | Msa0438070 | 0.852742 | 3.781364e-61 | -8.615850e-47 |
| Msa0051620 | Msa0447160 | 0.826065 | 3.328235e-54 | -8.615850e-47 |
| Msa0051620 | Msa0449490 | 0.810364 | 1.196069e-50 | -8.615850e-47 |
| Msa0051620 | Msa0449620 | 0.857086 | 2.073705e-62 | -8.615850e-47 |
| Msa0051620 | Msa0460510 | -0.800749 | 1.245267e-48 | -8.615850e-47 |
| Msa0051620 | Msa0463890 | 0.800605 | 1.332386e-48 | -8.615850e-47 |
| Msa0051620 | Msa0466850 | 0.848253 | 6.895007e-60 | -8.615850e-47 |
| Msa0051620 | Msa0473740 | -0.819194 | 1.320260e-52 | -8.615850e-47 |
| Msa0051620 | Msa0476440 | -0.814334 | 1.624275e-51 | -8.615850e-47 |
| Msa0051620 | Msa0478080 | 0.809201 | 2.127118e-50 | -8.615850e-47 |
| Msa0051620 | Msa0480260 | 0.803454 | 3.459139e-49 | -8.615850e-47 |
| Msa0051620 | Msa0480530 | 0.838611 | 2.595340e-57 | -8.615850e-47 |
| Msa0051620 | Msa0480540 | 0.876299 | 1.559552e-68 | -8.615850e-47 |
| Msa0051620 | Msa0480550 | 0.883178 | 5.588188e-71 | -8.615850e-47 |
| Msa0051620 | Msa0481770 | 0.853486 | 2.314779e-61 | -8.615850e-47 |
| Msa0051620 | Msa0488580 | 0.843731 | 1.169614e-58 | -8.615850e-47 |
| Msa0051620 | Msa0493870 | 0.835592 | 1.534085e-56 | -8.615850e-47 |
| Msa0051620 | Msa0497140 | -0.808268 | 3.366979e-50 | -8.615850e-47 |
| Msa0051620 | Msa0497680 | 0.800235 | 1.585086e-48 | -8.615850e-47 |
| Msa0051620 | Msa0497690 | 0.800897 | 1.161526e-48 | -8.615850e-47 |
| Msa0051620 | Msa0497860 | 0.867347 | 1.463921e-65 | -8.615850e-47 |
| Msa0051620 | Msa0500440 | 0.821666 | 3.576748e-53 | -8.615850e-47 |
| Msa0051620 | Msa0500770 | 0.847190 | 1.353035e-59 | -8.615850e-47 |
| Msa0051620 | Msa0508160 | 0.844218 | 8.664383e-59 | -8.615850e-47 |
| Msa0051620 | Msa0510870 | 0.816491 | 5.380506e-52 | -8.615850e-47 |
| Msa0051620 | Msa0513670 | 0.849645 | 2.831467e-60 | -8.615850e-47 |
| Msa0051620 | Msa0517820 | -0.800764 | 1.236680e-48 | -8.615850e-47 |
| Msa0051620 | Msa0518490 | 0.853074 | 3.039362e-61 | -8.615850e-47 |
| Msa0051620 | Msa0521260 | -0.806364 | 8.526642e-50 | -8.615850e-47 |
| Msa0051620 | Msa0522140 | 0.807397 | 5.155591e-50 | -8.615850e-47 |
| Msa0051620 | Msa0522170 | 0.823421 | 1.397622e-53 | -8.615850e-47 |
| Msa0051620 | Msa0523080 | 0.801833 | 7.470695e-49 | -8.615850e-47 |
| Msa0051620 | Msa0526840 | -0.816444 | 5.513366e-52 | -8.615850e-47 |
| Msa0051620 | Msa0537210 | 0.800544 | 1.371161e-48 | -8.615850e-47 |
| Msa0051620 | Msa0548790 | 0.810140 | 1.336516e-50 | -8.615850e-47 |
| Msa0051620 | Msa0550980 | -0.815787 | 7.730430e-52 | -8.615850e-47 |
| Msa0051620 | Msa0554770 | -0.815206 | 1.041160e-51 | -8.615850e-47 |
| Msa0051620 | Msa0556270 | 0.802051 | 6.739526e-49 | -8.615850e-47 |
| Msa0051620 | Msa0557440 | -0.811422 | 7.058882e-51 | -8.615850e-47 |
| Msa0051620 | Msa0559440 | -0.801899 | 7.242866e-49 | -8.615850e-47 |
| Msa0051620 | Msa0560280 | 0.814700 | 1.348034e-51 | -8.615850e-47 |
| Msa0051620 | Msa0561110 | 0.828988 | 6.618719e-55 | -8.615850e-47 |
| Msa0051620 | Msa0565120 | 0.828430 | 9.027725e-55 | -8.615850e-47 |
| Msa0051620 | Msa0565180 | 0.839082 | 1.959693e-57 | -8.615850e-47 |
| Msa0051620 | Msa0566530 | 0.833569 | 4.945346e-56 | -8.615850e-47 |
| Msa0051620 | Msa0568110 | 0.836222 | 1.061723e-56 | -8.615850e-47 |
| Msa0051620 | Msa0570460 | 0.849825 | 2.520755e-60 | -8.615850e-47 |
| Msa0051620 | Msa0572370 | -0.813587 | 2.374145e-51 | -8.615850e-47 |
| Msa0051620 | Msa0572700 | 0.826861 | 2.150655e-54 | -8.615850e-47 |
| Msa0051620 | Msa0577290 | -0.804762 | 1.849210e-49 | -8.615850e-47 |
| Msa0051620 | Msa0580840 | 0.878324 | 3.079053e-69 | -8.615850e-47 |
| Msa0051620 | Msa0580890 | -0.800560 | 1.361046e-48 | -8.615850e-47 |
| Msa0051620 | Msa0585060 | 0.860096 | 2.621155e-63 | -8.615850e-47 |
| Msa0051620 | Msa0606340 | -0.810075 | 1.380234e-50 | -8.615850e-47 |
| Msa0051620 | Msa0622800 | -0.821786 | 3.354582e-53 | -8.615850e-47 |
| Msa0051620 | Msa0622930 | -0.806435 | 8.236253e-50 | -8.615850e-47 |
| Msa0051620 | Msa0629040 | 0.804540 | 2.056827e-49 | -8.615850e-47 |
| Msa0051620 | Msa0645380 | 0.814471 | 1.514672e-51 | -8.615850e-47 |
| Msa0051620 | Msa0645480 | 0.800140 | 1.657389e-48 | -8.615850e-47 |
| Msa0051620 | Msa0651820 | 0.807049 | 6.110645e-50 | -8.615850e-47 |
| Msa0051620 | Msa0652590 | 0.803996 | 2.670208e-49 | -8.615850e-47 |
| Msa0051620 | Msa0652610 | 0.806549 | 7.793932e-50 | -8.615850e-47 |
| Msa0051620 | Msa0657260 | 0.824078 | 9.808540e-54 | -8.615850e-47 |
| Msa0051620 | Msa0657340 | 0.824714 | 6.949519e-54 | -8.615850e-47 |
| Msa0051620 | Msa0667670 | -0.809647 | 1.706431e-50 | -8.615850e-47 |
| Msa0051620 | Msa0685810 | -0.815246 | 1.019928e-51 | -8.615850e-47 |
| Msa0051620 | Msa0685860 | -0.809897 | 1.507882e-50 | -8.615850e-47 |
| Msa0051620 | Msa0690100 | -0.810371 | 1.191609e-50 | -8.615850e-47 |
| Msa0051620 | Msa0691350 | -0.802519 | 5.398745e-49 | -8.615850e-47 |
| Msa0051620 | Msa0694320 | 0.813414 | 2.591166e-51 | -8.615850e-47 |
| Msa0051620 | Msa0695250 | -0.800377 | 1.482800e-48 | -8.615850e-47 |
| Msa0051620 | Msa0697510 | 0.802133 | 6.481491e-49 | -8.615850e-47 |
| Msa0051620 | Msa0701430 | 0.848668 | 5.294111e-60 | -8.615850e-47 |
| Msa0051620 | Msa0701490 | 0.842184 | 3.019684e-58 | -8.615850e-47 |
| Msa0051620 | Msa0701560 | 0.840903 | 6.569144e-58 | -8.615850e-47 |
| Msa0051620 | Msa0704560 | 0.846962 | 1.561495e-59 | -8.615850e-47 |
| Msa0051620 | Msa0716620 | 0.849414 | 3.283172e-60 | -8.615850e-47 |
| Msa0051620 | Msa0727230 | 0.808796 | 2.597649e-50 | -8.615850e-47 |
| Msa0051620 | Msa0740630 | 0.828532 | 8.532526e-55 | -8.615850e-47 |
| Msa0051620 | Msa0744540 | 0.843546 | 1.311215e-58 | -8.615850e-47 |
| Msa0051620 | Msa0744550 | 0.873966 | 9.755034e-68 | -8.615850e-47 |
| Msa0051620 | Msa0744560 | 0.885318 | 9.015512e-72 | -8.615850e-47 |
| Msa0051620 | Msa0746340 | 0.860819 | 1.583496e-63 | -8.615850e-47 |
| Msa0051620 | Msa0750490 | -0.804336 | 2.268707e-49 | -8.615850e-47 |
| Msa0051620 | Msa0753410 | 0.822472 | 2.326120e-53 | -8.615850e-47 |
| Msa0051620 | Msa0772350 | 0.822452 | 2.351334e-53 | -8.615850e-47 |
| Msa0051620 | Msa0793270 | 0.808347 | 3.238824e-50 | -8.615850e-47 |
| Msa0051620 | Msa0794200 | 0.800586 | 1.344219e-48 | -8.615850e-47 |
| Msa0051620 | Msa0795320 | 0.844747 | 6.241648e-59 | -8.615850e-47 |
| Msa0051620 | Msa0806910 | 0.822919 | 1.830736e-53 | -8.615850e-47 |
| Msa0051620 | Msa0816630 | 0.816025 | 6.841403e-52 | -8.615850e-47 |
| Msa0051620 | Msa0820880 | 0.832190 | 1.088994e-55 | -8.615850e-47 |
| Msa0051620 | Msa0826360 | 0.851729 | 7.343176e-61 | -8.615850e-47 |
| Msa0051620 | Msa0826370 | 0.862417 | 5.145470e-64 | -8.615850e-47 |
| Msa0051620 | Msa0826380 | 0.849668 | 2.789468e-60 | -8.615850e-47 |
| Msa0051620 | Msa0826450 | 0.857727 | 1.340431e-62 | -8.615850e-47 |
| Msa0051620 | Msa0829990 | 0.812560 | 3.986915e-51 | -8.615850e-47 |
| Msa0051620 | Msa0837550 | 0.805982 | 1.025974e-49 | -8.615850e-47 |
| Msa0051620 | Msa0843740 | 0.815359 | 9.625920e-52 | -8.615850e-47 |
| Msa0051620 | Msa0848020 | 0.805699 | 1.176691e-49 | -8.615850e-47 |
| Msa0051620 | Msa0859040 | 0.822907 | 1.842134e-53 | -8.615850e-47 |
| Msa0051620 | Msa0863940 | 0.815366 | 9.592320e-52 | -8.615850e-47 |
| Msa0051620 | Msa0865810 | 0.872920 | 2.193790e-67 | -8.615850e-47 |
| Msa0051620 | Msa0865820 | 0.856072 | 4.119450e-62 | -8.615850e-47 |
| Msa0051620 | Msa0865830 | 0.872290 | 3.562184e-67 | -8.615850e-47 |
| Msa0051620 | Msa0874750 | 0.828737 | 7.611240e-55 | -8.615850e-47 |
| Msa0051620 | Msa0879940 | -0.818637 | 1.766762e-52 | -8.615850e-47 |
| Msa0051620 | Msa0906680 | 0.815164 | 1.063868e-51 | -8.615850e-47 |
| Msa0051620 | Msa0921790 | 0.845222 | 4.646514e-59 | -8.615850e-47 |
| Msa0051620 | Msa0933050 | -0.808703 | 2.718138e-50 | -8.615850e-47 |
| Msa0051620 | Msa0933500 | -0.800235 | 1.585141e-48 | -8.615850e-47 |
| Msa0051620 | Msa0937270 | -0.810511 | 1.111351e-50 | -8.615850e-47 |
| Msa0051620 | Msa0945320 | 0.804995 | 1.652706e-49 | -8.615850e-47 |
| Msa0051620 | Msa0960580 | 0.840243 | 9.779369e-58 | -8.615850e-47 |
| Msa0051620 | Msa0970410 | 0.828106 | 1.081007e-54 | -8.615850e-47 |
| Msa0051620 | Msa0970940 | -0.813731 | 2.206649e-51 | -8.615850e-47 |
| Msa0051620 | Msa0975950 | 0.801075 | 1.068414e-48 | -8.615850e-47 |
| Msa0051620 | Msa0976400 | 0.846349 | 2.296473e-59 | -8.615850e-47 |
| Msa0051620 | Msa0984230 | -0.819221 | 1.301220e-52 | -8.615850e-47 |
| Msa0051620 | Msa1003730 | 0.800811 | 1.209706e-48 | -8.615850e-47 |
| Msa0051620 | Msa1003920 | 0.814297 | 1.655204e-51 | -8.615850e-47 |
| Msa0051620 | Msa1018210 | -0.808751 | 2.655562e-50 | -8.615850e-47 |
| Msa0051620 | Msa1023430 | 0.822553 | 2.227160e-53 | -8.615850e-47 |
| Msa0051620 | Msa1026080 | 0.811465 | 6.908637e-51 | -8.615850e-47 |
| Msa0051620 | Msa1027910 | 0.829833 | 4.126833e-55 | -8.615850e-47 |
| Msa0051620 | Msa1030210 | 0.857097 | 2.057783e-62 | -8.615850e-47 |
| Msa0051620 | Msa1031780 | 0.867120 | 1.729820e-65 | -8.615850e-47 |
| Msa0051620 | Msa1035050 | 0.837816 | 4.156819e-57 | -8.615850e-47 |
| Msa0051620 | Msa1037360 | 0.803608 | 3.214459e-49 | -8.615850e-47 |
| Msa0051620 | Msa1041250 | 0.805350 | 1.392886e-49 | -8.615850e-47 |
| Msa0051620 | Msa1057940 | -0.803874 | 2.830356e-49 | -8.615850e-47 |
| Msa0051620 | Msa1061840 | 0.834962 | 2.212731e-56 | -8.615850e-47 |
| Msa0051620 | Msa1062060 | 0.803949 | 2.730530e-49 | -8.615850e-47 |
| Msa0051620 | Msa1064240 | 0.828036 | 1.123583e-54 | -8.615850e-47 |
| Msa0051620 | Msa1067800 | 0.812562 | 3.983226e-51 | -8.615850e-47 |
| Msa0051620 | Msa1069250 | 0.863318 | 2.711511e-64 | -8.615850e-47 |
| Msa0051620 | Msa1071350 | 0.815387 | 9.487659e-52 | -8.615850e-47 |
| Msa0051620 | Msa1075090 | 0.828194 | 1.029428e-54 | -8.615850e-47 |
| Msa0051620 | Msa1080650 | 0.808825 | 2.560887e-50 | -8.615850e-47 |
| Msa0051620 | Msa1084340 | -0.808558 | 2.920412e-50 | -8.615850e-47 |
| Msa0051620 | Msa1084890 | 0.800642 | 1.309725e-48 | -8.615850e-47 |
| Msa0051620 | Msa1095590 | 0.813476 | 2.511315e-51 | -8.615850e-47 |
| Msa0051620 | Msa1102210 | 0.813011 | 3.176264e-51 | -8.615850e-47 |
| Msa0051620 | Msa1107250 | 0.811429 | 7.032145e-51 | -8.615850e-47 |
| Msa0051620 | Msa1107510 | 0.834284 | 3.277099e-56 | -8.615850e-47 |
| Msa0051620 | Msa1110900 | 0.822506 | 2.284411e-53 | -8.615850e-47 |
| Msa0051620 | Msa1113090 | 0.821704 | 3.504503e-53 | -8.615850e-47 |
| Msa0051620 | Msa1117770 | -0.805722 | 1.163466e-49 | -8.615850e-47 |
| Msa0051620 | Msa1118720 | 0.852041 | 5.986152e-61 | -8.615850e-47 |
| Msa0051620 | Msa1120580 | 0.840250 | 9.738457e-58 | -8.615850e-47 |
| Msa0051620 | Msa1142390 | 0.827020 | 1.969778e-54 | -8.615850e-47 |
| Msa0051620 | Msa1144380 | -0.808923 | 2.439925e-50 | -8.615850e-47 |
| Msa0051620 | Msa1150740 | 0.804097 | 2.543419e-49 | -8.615850e-47 |
| Msa0051620 | Msa1150920 | 0.800772 | 1.231850e-48 | -8.615850e-47 |
| Msa0051620 | Msa1151070 | 0.819935 | 8.940851e-53 | -8.615850e-47 |
| Msa0051620 | Msa1154240 | 0.819816 | 9.522250e-53 | -8.615850e-47 |
| Msa0051620 | Msa1157110 | 0.833724 | 4.524547e-56 | -8.615850e-47 |
| Msa0051620 | Msa1157200 | 0.823052 | 1.704474e-53 | -8.615850e-47 |
| Msa0051620 | Msa1161550 | -0.816059 | 6.722022e-52 | -8.615850e-47 |
| Msa0051620 | Msa1162430 | 0.805574 | 1.249750e-49 | -8.615850e-47 |
| Msa0051620 | Msa1164230 | 0.811438 | 6.999677e-51 | -8.615850e-47 |
| Msa0051620 | Msa1165670 | 0.804977 | 1.666993e-49 | -8.615850e-47 |
| Msa0051620 | Msa1174280 | 0.847971 | 8.247215e-60 | -8.615850e-47 |
| Msa0051620 | Msa1185270 | 0.807906 | 4.019796e-50 | -8.615850e-47 |
| Msa0051620 | Msa1202110 | 0.851336 | 9.485883e-61 | -8.615850e-47 |
| Msa0051620 | Msa1211610 | 0.871751 | 5.384426e-67 | -8.615850e-47 |
| Msa0051620 | Msa1217260 | 0.814510 | 1.484887e-51 | -8.615850e-47 |
| Msa0051620 | Msa1223560 | 0.858731 | 6.735136e-63 | -8.615850e-47 |
| Msa0051620 | Msa1224510 | 0.858476 | 8.024029e-63 | -8.615850e-47 |
| Msa0051620 | Msa1235960 | -0.828723 | 7.672989e-55 | -8.615850e-47 |
| Msa0051620 | Msa1235990 | -0.832098 | 1.147319e-55 | -8.615850e-47 |
| Msa0051620 | Msa1254870 | 0.852279 | 5.124322e-61 | -8.615850e-47 |
| Msa0051620 | Msa1256600 | 0.833692 | 4.607255e-56 | -8.615850e-47 |
| Msa0051620 | Msa1262540 | 0.841513 | 4.541206e-58 | -8.615850e-47 |
| Msa0051620 | Msa1263500 | 0.844675 | 6.528378e-59 | -8.615850e-47 |
| Msa0051620 | Msa1271220 | -0.801363 | 9.326003e-49 | -8.615850e-47 |
| Msa0051620 | Msa1299480 | 0.876558 | 1.269604e-68 | -8.615850e-47 |
| Msa0051620 | Msa1308430 | -0.808496 | 3.009982e-50 | -8.615850e-47 |
| Msa0051620 | Msa1315880 | -0.813011 | 3.176264e-51 | -8.615850e-47 |
| Msa0051620 | Msa1316090 | -0.820351 | 7.180458e-53 | -8.615850e-47 |
| Msa0051620 | Msa1322180 | 0.832813 | 7.628495e-56 | -8.615850e-47 |
| Msa0051620 | Msa1328430 | 0.851753 | 7.227041e-61 | -8.615850e-47 |
| Msa0051620 | Msa1331950 | 0.813560 | 2.406166e-51 | -8.615850e-47 |
| Msa0051620 | Msa1333700 | 0.857135 | 2.006212e-62 | -8.615850e-47 |
| Msa0051620 | Msa1341850 | -0.817795 | 2.739157e-52 | -8.615850e-47 |
| Msa0051620 | Msa1344870 | -0.806215 | 9.167286e-50 | -8.615850e-47 |
| Msa0051620 | Msa1348340 | -0.820330 | 7.262947e-53 | -8.615850e-47 |
| Msa0051620 | Msa1349830 | 0.868235 | 7.593744e-66 | -8.615850e-47 |
| Msa0051620 | Msa1359770 | 0.824539 | 7.640272e-54 | -8.615850e-47 |
| Msa0051620 | Msa1361710 | 0.805159 | 1.526808e-49 | -8.615850e-47 |
| Msa0051620 | Msa1366480 | 0.813142 | 2.972525e-51 | -8.615850e-47 |
| Msa0051620 | Msa1372460 | -0.812113 | 4.991910e-51 | -8.615850e-47 |
| Msa0051620 | Msa1372470 | -0.826855 | 2.157444e-54 | -8.615850e-47 |
| Msa0051620 | Msa1377050 | 0.845672 | 3.508331e-59 | -8.615850e-47 |
| Msa0051620 | Msa1377980 | -0.801071 | 1.070247e-48 | -8.615850e-47 |
| Msa0051620 | Msa1382740 | 0.849368 | 3.382715e-60 | -8.615850e-47 |
| Msa0051620 | Msa1383790 | 0.801366 | 9.314932e-49 | -8.615850e-47 |
| Msa0051620 | Msa1387610 | 0.855946 | 4.482395e-62 | -8.615850e-47 |
| Msa0051620 | Msa1389630 | 0.817894 | 2.602123e-52 | -8.615850e-47 |
| Msa0051620 | Msa1395380 | -0.807560 | 4.762079e-50 | -8.615850e-47 |
| Msa0051620 | Msa1396160 | 0.839739 | 1.323142e-57 | -8.615850e-47 |
| Msa0051620 | Msa1398120 | 0.854896 | 9.068706e-62 | -8.615850e-47 |
| Msa0051620 | Msa1399930 | 0.836925 | 7.032082e-57 | -8.615850e-47 |
| Msa0051620 | Msa1401110 | 0.828138 | 1.062194e-54 | -8.615850e-47 |
| Msa0051620 | Msa1408230 | -0.802260 | 6.105356e-49 | -8.615850e-47 |
| Msa0051620 | Msa1410480 | -0.806793 | 6.922132e-50 | -8.615850e-47 |
| Msa0051620 | Msa1410500 | -0.811576 | 6.532483e-51 | -8.615850e-47 |
| Msa0051620 | Msa1415510 | -0.802361 | 5.818847e-49 | -8.615850e-47 |
| Msa0051620 | Msa1427000 | 0.848564 | 5.656213e-60 | -8.615850e-47 |
| Msa0051620 | Msa1432180 | 0.811177 | 7.975517e-51 | -8.615850e-47 |
| Msa0051620 | Msa1434850 | -0.819438 | 1.161424e-52 | -8.615850e-47 |
| Msa0051620 | Msa1434860 | -0.830619 | 2.651389e-55 | -8.615850e-47 |
| Msa0051620 | Msa1435320 | 0.820029 | 8.513040e-53 | -8.615850e-47 |
| Msa0051620 | Msa1438160 | 0.808925 | 2.436899e-50 | -8.615850e-47 |
| Msa0051620 | Msa1439780 | 0.847263 | 1.291332e-59 | -8.615850e-47 |
| Msa0051620 | Msa1443400 | 0.816396 | 5.651869e-52 | -8.615850e-47 |
| Msa0051620 | Msa1448040 | 0.816927 | 4.295435e-52 | -8.615850e-47 |
| Msa0051620 | Msa1449470 | 0.860545 | 1.917302e-63 | -8.615850e-47 |
| Msa0051620 | Msa1452080 | -0.812162 | 4.870281e-51 | -8.615850e-47 |
| Msa0051620 | Msa1453070 | -0.802881 | 4.545117e-49 | -8.615850e-47 |
| Msa0051620 | Msa1453600 | 0.849717 | 2.703754e-60 | -8.615850e-47 |
| Msa0051620 | Msa1453890 | 0.806697 | 7.253971e-50 | -8.615850e-47 |
| Msa0051620 | Msa1454300 | -0.808657 | 2.780955e-50 | -8.615850e-47 |
| Msa0051620 | Msa1459920 | 0.847981 | 8.198514e-60 | -8.615850e-47 |
| Msa0051620 | Msa1459930 | 0.858518 | 7.797733e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051620 | MtrunA17_Chr1g0153781 | 98.561 | 417 | 6 | 0 | 1 | 417 | 1 | 417 | 0.0 | 852 |
| Msa0051620 | MtrunA17_Chr3g0133691 | 78.164 | 403 | 86 | 2 | 5 | 407 | 4 | 404 | 0.0 | 643 |
| Msa0051620 | MtrunA17_Chr3g0133681 | 76.427 | 403 | 93 | 2 | 5 | 407 | 4 | 404 | 0.0 | 633 |
| Msa0051620 | MtrunA17_Chr5g0402441 | 57.560 | 377 | 155 | 3 | 19 | 394 | 14 | 386 | 1.04e-158 | 453 |
| Msa0051620 | MtrunA17_Chr5g0402451 | 55.076 | 394 | 170 | 4 | 9 | 400 | 1 | 389 | 1.57e-158 | 452 |
| Msa0051620 | MtrunA17_Chr8g0335581 | 43.237 | 414 | 195 | 13 | 11 | 410 | 11 | 398 | 3.01e-100 | 304 |
| Msa0051620 | MtrunA17_Chr8g0335651 | 46.329 | 395 | 174 | 8 | 10 | 399 | 22 | 383 | 1.20e-94 | 290 |
| Msa0051620 | MtrunA17_Chr8g0335611 | 42.569 | 397 | 199 | 11 | 11 | 399 | 22 | 397 | 9.45e-94 | 288 |
| Msa0051620 | MtrunA17_Chr8g0335621 | 42.065 | 397 | 201 | 11 | 11 | 399 | 53 | 428 | 3.15e-92 | 285 |
| Msa0051620 | MtrunA17_Chr8g0335631 | 42.998 | 407 | 201 | 11 | 11 | 410 | 22 | 404 | 2.94e-88 | 274 |
| Msa0051620 | MtrunA17_Chr8g0335591 | 40.441 | 408 | 212 | 11 | 10 | 409 | 21 | 405 | 4.69e-85 | 266 |
| Msa0051620 | MtrunA17_Chr1g0199801 | 28.501 | 407 | 253 | 14 | 21 | 412 | 75 | 458 | 2.70e-37 | 141 |
| Msa0051620 | MtrunA17_Chr7g0259871 | 28.736 | 261 | 147 | 9 | 23 | 269 | 32 | 267 | 3.70e-25 | 105 |
| Msa0051620 | MtrunA17_Chr1g0185551 | 25.513 | 341 | 217 | 12 | 23 | 358 | 32 | 340 | 4.81e-25 | 105 |
| Msa0051620 | MtrunA17_Chr2g0292051 | 27.190 | 331 | 189 | 12 | 6 | 330 | 54 | 338 | 1.46e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051620 | AT2G26560.1 | 66.329 | 395 | 128 | 4 | 12 | 405 | 10 | 400 | 0.0 | 527 |
| Msa0051620 | AT4G37070.2 | 59.591 | 391 | 156 | 2 | 13 | 403 | 11 | 399 | 5.19e-169 | 480 |
| Msa0051620 | AT4G37050.1 | 60.804 | 398 | 148 | 2 | 14 | 404 | 28 | 424 | 3.20e-168 | 478 |
| Msa0051620 | AT4G37060.1 | 57.468 | 395 | 166 | 2 | 14 | 408 | 12 | 404 | 9.62e-165 | 469 |
| Msa0051620 | AT4G37070.3 | 59.200 | 375 | 151 | 2 | 13 | 387 | 11 | 383 | 1.58e-160 | 457 |
| Msa0051620 | AT4G37070.1 | 59.200 | 375 | 151 | 2 | 13 | 387 | 11 | 383 | 1.58e-160 | 457 |
| Msa0051620 | AT4G37060.2 | 53.286 | 426 | 166 | 3 | 14 | 408 | 12 | 435 | 3.72e-158 | 454 |
| Msa0051620 | AT4G37070.4 | 57.600 | 375 | 146 | 3 | 13 | 387 | 11 | 372 | 1.89e-152 | 436 |
| Msa0051620 | AT5G43590.1 | 53.077 | 390 | 172 | 4 | 13 | 399 | 6 | 387 | 7.94e-130 | 380 |
| Msa0051620 | AT5G43590.2 | 53.077 | 390 | 172 | 4 | 13 | 399 | 73 | 454 | 5.75e-129 | 380 |
| Msa0051620 | AT3G54950.1 | 27.569 | 399 | 258 | 11 | 21 | 414 | 98 | 470 | 1.42e-35 | 137 |
| Msa0051620 | AT4G29800.1 | 28.256 | 407 | 255 | 14 | 21 | 412 | 121 | 505 | 1.92e-35 | 137 |
| Msa0051620 | AT4G29800.2 | 28.186 | 408 | 255 | 14 | 21 | 412 | 121 | 506 | 2.80e-35 | 137 |
| Msa0051620 | AT2G39220.1 | 29.639 | 388 | 243 | 15 | 21 | 402 | 108 | 471 | 1.75e-34 | 134 |
| Msa0051620 | AT3G63200.1 | 28.707 | 317 | 192 | 10 | 23 | 333 | 32 | 320 | 1.12e-30 | 122 |
Find 89 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTATGGTTTATATATTTC+AGG | 0.196146 | 1_2:-5716472 | None:intergenic |
| AGGGCAATGTTCAAGGTAAA+AGG | 0.209370 | 1_2:-5717676 | None:intergenic |
| TTAATAAATTCTCACCAATT+TGG | 0.220880 | 1_2:-5719770 | None:intergenic |
| TGATAATTACCTTCGAATTC+AGG | 0.242193 | 1_2:+5719533 | Msa0051620:CDS |
| TCCAGAGTCAATTTAGAAAA+TGG | 0.281008 | 1_2:+5719804 | Msa0051620:CDS |
| TTGAAGAAACTATGCCAAAT+TGG | 0.298509 | 1_2:+5719756 | Msa0051620:CDS |
| GTAAAAGGGCTTGATATCTT+TGG | 0.318803 | 1_2:-5717661 | None:intergenic |
| GCTTCAGAGATCCCCTTGTT+TGG | 0.326246 | 1_2:+5718425 | Msa0051620:intron |
| TACTCAATCAAGTGGTGATA+TGG | 0.328294 | 1_2:+5719467 | Msa0051620:CDS |
| CCATATTCCAGAGGCTTGAT+TGG | 0.331569 | 1_2:-5719312 | None:intergenic |
| CCAATCAAGCCTCTGGAATA+TGG | 0.340675 | 1_2:+5719312 | Msa0051620:CDS |
| GTAACCATTCTTAGTATTGA+TGG | 0.353477 | 1_2:+5716631 | Msa0051620:CDS |
| ATTCCTTGAATCTCACCTTC+AGG | 0.368436 | 1_2:+5716693 | Msa0051620:CDS |
| CCAAATGGGGATTATTAGAT+TGG | 0.382105 | 1_2:+5719406 | Msa0051620:CDS |
| TGCACAAATGGCAGCCAAAT+GGG | 0.384292 | 1_2:+5719392 | Msa0051620:CDS |
| AACAAAGGCTGTATAGAGTA+TGG | 0.387465 | 1_2:-5716487 | None:intergenic |
| TTGGTTTCTCCGGTTGTTAG+TGG | 0.394804 | 1_2:-5719837 | None:intergenic |
| TTTCTTTCCAATCAAGCCTC+TGG | 0.407655 | 1_2:+5719305 | Msa0051620:CDS |
| CCAATCTAATAATCCCCATT+TGG | 0.412692 | 1_2:-5719406 | None:intergenic |
| TGAGAATTTATTAAAGAAAC+CGG | 0.414005 | 1_2:+5719779 | Msa0051620:CDS |
| AGCATCTTCATTGGTTTCTC+CGG | 0.415887 | 1_2:-5719847 | None:intergenic |
| GGCTTGATTGGAAAGAAATC+AGG | 0.418966 | 1_2:-5719300 | None:intergenic |
| CTGATCATTTCAATAGGCAC+TGG | 0.431825 | 1_2:+5719342 | Msa0051620:CDS |
| TCTTGCCTCTACTTGTGTGT+GGG | 0.432968 | 1_2:-5720043 | None:intergenic |
| CCTCTTGAGAGCATCTTCAT+TGG | 0.439200 | 1_2:-5719856 | None:intergenic |
| ATATTAATTACCTATGTTGT+GGG | 0.443069 | 1_2:-5717707 | None:intergenic |
| GCAAAGGTAATGAGATCTCT+TGG | 0.450334 | 1_2:+5717886 | Msa0051620:CDS |
| CTGCACAAATGGCAGCCAAA+TGG | 0.451475 | 1_2:+5719391 | Msa0051620:CDS |
| AGTATGGTTTATATATTTCA+GGG | 0.460216 | 1_2:-5716471 | None:intergenic |
| ACAAATAAAGATCAGGAAGC+TGG | 0.460216 | 1_2:+5718516 | Msa0051620:CDS |
| AGGAATTCAATAATTGCAGC+AGG | 0.463149 | 1_2:-5716676 | None:intergenic |
| GGGCAATGTTCAAGGTAAAA+GGG | 0.470464 | 1_2:-5717675 | None:intergenic |
| TAACCATTCTTAGTATTGAT+GGG | 0.470961 | 1_2:+5716632 | Msa0051620:CDS |
| GAGGAGTTCAATCTCATTGA+TGG | 0.474688 | 1_2:+5718546 | Msa0051620:CDS |
| GATTACTTTGATGTGATCTC+AGG | 0.483035 | 1_2:+5717567 | Msa0051620:CDS |
| CTTGGAGGACCCAAATATGA+TGG | 0.485178 | 1_2:+5717904 | Msa0051620:CDS |
| TATATTAATTACCTATGTTG+TGG | 0.490009 | 1_2:-5717708 | None:intergenic |
| CAAGTTGTTAGAGAGAAACT+TGG | 0.490786 | 1_2:+5717940 | Msa0051620:CDS |
| TTATTTGTGAAGTTGTGAGC+AGG | 0.494731 | 1_2:-5718501 | None:intergenic |
| TTGTGAGCAGGGAGATAAGT+AGG | 0.496729 | 1_2:-5718489 | None:intergenic |
| TGGTGTTTGCGCAAATAATC+CGG | 0.497493 | 1_2:+5718569 | Msa0051620:CDS |
| CAAGTAGAGGCAAGAAAGCC+CGG | 0.498544 | 1_2:+5720051 | Msa0051620:CDS |
| CAATAATTGCAGCAGGGATG+AGG | 0.499347 | 1_2:-5716669 | None:intergenic |
| GGAGAGGTTCACTGCACAAA+TGG | 0.505314 | 1_2:+5719380 | Msa0051620:CDS |
| CAACTTCACAAATAAAGATC+AGG | 0.505940 | 1_2:+5718509 | Msa0051620:CDS |
| TTCTTGCCTCTACTTGTGTG+TGG | 0.506302 | 1_2:-5720044 | None:intergenic |
| TCTCTCTAACAACTTGATGA+AGG | 0.508522 | 1_2:-5717933 | None:intergenic |
| TCTAAATTGACTCTGGAGAC+CGG | 0.508962 | 1_2:-5719798 | None:intergenic |
| TGATAAGATGAGAAAATGAT+TGG | 0.523309 | 1_2:-5718030 | None:intergenic |
| ATACCTGAAGGTGAGATTCA+AGG | 0.523660 | 1_2:-5716696 | None:intergenic |
| GAAATTACATAAAATTTCGA+TGG | 0.526047 | 1_2:+5716552 | Msa0051620:exon |
| TTACCAAGTTCCCATAAGTA+GGG | 0.536098 | 1_2:-5716612 | None:intergenic |
| GTTACCAAGTTCCCATAAGT+AGG | 0.539081 | 1_2:-5716613 | None:intergenic |
| GTGATCTCAGGAACAAGTAC+AGG | 0.541512 | 1_2:+5717579 | Msa0051620:CDS |
| ATGCAGGATGATACATTGAC+AGG | 0.541552 | 1_2:+5719696 | Msa0051620:intron |
| ATTACATAAAATTTCGATGG+AGG | 0.541674 | 1_2:+5716555 | Msa0051620:exon |
| TGAATCATGAAACTAGATGC+CGG | 0.546406 | 1_2:-5720070 | None:intergenic |
| TTACATAAAATTTCGATGGA+GGG | 0.558119 | 1_2:+5716556 | Msa0051620:exon |
| GAATCATGAAACTAGATGCC+GGG | 0.560416 | 1_2:-5720069 | None:intergenic |
| TTAGATTGGCTAACACATAG+TGG | 0.560851 | 1_2:+5719420 | Msa0051620:CDS |
| TGATCATTTCAATAGGCACT+GGG | 0.562419 | 1_2:+5719343 | Msa0051620:CDS |
| TATTTGTGAAGTTGTGAGCA+GGG | 0.563364 | 1_2:-5718500 | None:intergenic |
| CTTGCCTCTACTTGTGTGTG+GGG | 0.564230 | 1_2:-5720042 | None:intergenic |
| AACCATTCTTAGTATTGATG+GGG | 0.567798 | 1_2:+5716633 | Msa0051620:CDS |
| CAAAGTCTTGATGTCAAATG+TGG | 0.569923 | 1_2:-5718004 | None:intergenic |
| ATCTGTGTGCAGGAGTTGGA+TGG | 0.573566 | 1_2:+5717525 | Msa0051620:intron |
| TTCTTCAGTAGACATTGCTA+CGG | 0.581643 | 1_2:+5719725 | Msa0051620:CDS |
| TTTATCTGGAGCAGCTAACA+TGG | 0.585474 | 1_2:-5717616 | None:intergenic |
| GAAAGTTTAGCATCCAAACA+AGG | 0.590523 | 1_2:-5718438 | None:intergenic |
| TCAGGAAGCTGGAAAAGAAG+AGG | 0.603502 | 1_2:+5718527 | Msa0051620:CDS |
| TTCAGTAGACATTGCTACGG+AGG | 0.603616 | 1_2:+5719728 | Msa0051620:CDS |
| CCAATGAAGATGCTCTCAAG+AGG | 0.607291 | 1_2:+5719856 | Msa0051620:CDS |
| AGTTGGATGGTGAAGATGCA+AGG | 0.613978 | 1_2:+5717538 | Msa0051620:CDS |
| AAAGTTTAGCATCCAAACAA+GGG | 0.615469 | 1_2:-5718437 | None:intergenic |
| AGATCCCCACACACAAGTAG+AGG | 0.617675 | 1_2:+5720038 | Msa0051620:CDS |
| GCACAAATGGCAGCCAAATG+GGG | 0.620024 | 1_2:+5719393 | Msa0051620:CDS |
| AAGGTAATGAGATCTCTTGG+AGG | 0.632690 | 1_2:+5717889 | Msa0051620:CDS |
| TACCAAGTTCCCATAAGTAG+GGG | 0.646419 | 1_2:-5716611 | None:intergenic |
| ATCTCAGGAACAAGTACAGG+AGG | 0.646501 | 1_2:+5717582 | Msa0051620:CDS |
| ACCATTCTTAGTATTGATGG+GGG | 0.646720 | 1_2:+5716634 | Msa0051620:CDS |
| TGGTGCGACACTATTAGCAA+AGG | 0.647189 | 1_2:+5717870 | Msa0051620:CDS |
| GGAATTCAATAATTGCAGCA+GGG | 0.658810 | 1_2:-5716675 | None:intergenic |
| GAGTTCAATCTCATTGATGG+TGG | 0.662016 | 1_2:+5718549 | Msa0051620:CDS |
| AAATGTGGGAACAACAATGT+TGG | 0.662239 | 1_2:-5717989 | None:intergenic |
| AAGTTTAGCATCCAAACAAG+GGG | 0.668793 | 1_2:-5718436 | None:intergenic |
| ACCAAGTTCCCATAAGTAGG+GGG | 0.679072 | 1_2:-5716610 | None:intergenic |
| AAAGTCTTGATGTCAAATGT+GGG | 0.692840 | 1_2:-5718003 | None:intergenic |
| TAATGGTGTGATGAAAACAA+AGG | 0.706401 | 1_2:-5716502 | None:intergenic |
| AGAAAACGACCATATTCCAG+AGG | 0.710413 | 1_2:-5719321 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTTTATATATAA+TGG | + | chr1_2:5718082-5718101 | Msa0051620:intron | 0.0% |
| !!! | TTTTTTTGAGTAAATATTAA+TGG | - | chr1_2:5716522-5716541 | None:intergenic | 10.0% |
| !! | TTCAAATAATAAAGTAATAT+TGG | - | chr1_2:5717484-5717503 | None:intergenic | 10.0% |
| !!! | TCTAAAAAATAAGTTTTTAT+TGG | + | chr1_2:5717826-5717845 | Msa0051620:intron | 10.0% |
| !! | GACAAAATATATAATTTATT+TGG | - | chr1_2:5718332-5718351 | None:intergenic | 10.0% |
| !!! | ACCTTTTTTTTTTTTTTTTA+TGG | + | chr1_2:5719568-5719587 | Msa0051620:intron | 10.0% |
| !! | ACCATAAAAAAAAAAAAAAA+AGG | - | chr1_2:5719572-5719591 | None:intergenic | 10.0% |
| !!! | ATAAAACATTTTATAATACA+TGG | - | chr1_2:5720257-5720276 | None:intergenic | 10.0% |
| !!! | TTATTTTCTTTTTGCATAAA+TGG | + | chr1_2:5716853-5716872 | Msa0051620:intron | 15.0% |
| !!! | TCATTTTATCTATATGTTTT+AGG | - | chr1_2:5717203-5717222 | None:intergenic | 15.0% |
| !!! | TAATTTATGTTTATTTTTCG+TGG | - | chr1_2:5717297-5717316 | None:intergenic | 15.0% |
| !! | TAAATTAATTAGTTGTTGAT+TGG | + | chr1_2:5718613-5718632 | Msa0051620:intron | 15.0% |
| !! | TTGTTTATTTATATATTCGT+TGG | - | chr1_2:5718695-5718714 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTATGGTAGT+AGG | + | chr1_2:5719575-5719594 | Msa0051620:intron | 15.0% |
| !! | GCACAATTATAATATAATTT+GGG | - | chr1_2:5719924-5719943 | None:intergenic | 15.0% |
| !! | TGCACAATTATAATATAATT+TGG | - | chr1_2:5719925-5719944 | None:intergenic | 15.0% |
| !! | AGTATGGTTTATATATTTCA+GGG | - | chr1_2:5716474-5716493 | None:intergenic | 20.0% |
| !! | GAAATTACATAAAATTTCGA+TGG | + | chr1_2:5716552-5716571 | Msa0051620:exon | 20.0% |
| !! | CATATATATAATATACCTGA+AGG | - | chr1_2:5716711-5716730 | None:intergenic | 20.0% |
| !!! | GAAAGTTTTTATATGTAAGT+TGG | + | chr1_2:5716963-5716982 | Msa0051620:intron | 20.0% |
| !! | ATTTATTATGCAAACTATCT+TGG | + | chr1_2:5717023-5717042 | Msa0051620:intron | 20.0% |
| !!! | AAAAAAAAGTGTCCTTTTTT+AGG | + | chr1_2:5717088-5717107 | Msa0051620:intron | 20.0% |
| !!! | AAAAAAAGTGTCCTTTTTTA+GGG | + | chr1_2:5717089-5717108 | Msa0051620:intron | 20.0% |
| !! | AGATTTAACAGTTTATACAA+CGG | + | chr1_2:5717161-5717180 | Msa0051620:intron | 20.0% |
| !! | TAGCAAAAGAAATTTAAAGA+TGG | + | chr1_2:5717315-5717334 | Msa0051620:intron | 20.0% |
| !! | ATATTAATTACCTATGTTGT+GGG | - | chr1_2:5717710-5717729 | None:intergenic | 20.0% |
| !! | TATATTAATTACCTATGTTG+TGG | - | chr1_2:5717711-5717730 | None:intergenic | 20.0% |
| !! | CTTCTATTTGTAATTATTTG+AGG | + | chr1_2:5717763-5717782 | Msa0051620:intron | 20.0% |
| !!! | ATGTATTTTAAATCCACAAT+TGG | - | chr1_2:5718115-5718134 | None:intergenic | 20.0% |
| !!! | CTTTGAAATAAAACTATTGT+TGG | - | chr1_2:5718369-5718388 | None:intergenic | 20.0% |
| !!! | ATTTCAAACAATTTTAGTCT+AGG | - | chr1_2:5718398-5718417 | None:intergenic | 20.0% |
| !! | TCAAAATTTGTATTATGCAA+TGG | + | chr1_2:5718759-5718778 | Msa0051620:intron | 20.0% |
| !! | TTCAAAAATAAAAGACAAAG+TGG | - | chr1_2:5718807-5718826 | None:intergenic | 20.0% |
| !!! | GGTAAAACTTTTTACATTAA+CGG | + | chr1_2:5719044-5719063 | Msa0051620:intron | 20.0% |
| !!! | TTTGTTATTTTTTATGATCC+AGG | + | chr1_2:5719230-5719249 | Msa0051620:intron | 20.0% |
| !! | TGAGTAAAAACATCAATTAA+GGG | - | chr1_2:5719453-5719472 | None:intergenic | 20.0% |
| !! | TTGAGTAAAAACATCAATTA+AGG | - | chr1_2:5719454-5719473 | None:intergenic | 20.0% |
| !! | TGATGTACAAGATATATTAA+TGG | - | chr1_2:5719629-5719648 | None:intergenic | 20.0% |
| !! | TTAATAAATTCTCACCAATT+TGG | - | chr1_2:5719773-5719792 | None:intergenic | 20.0% |
| !! | TGAGAATTTATTAAAGAAAC+CGG | + | chr1_2:5719779-5719798 | Msa0051620:CDS | 20.0% |
| !! | TTAAGATTAATTAGTAGAGA+TGG | + | chr1_2:5719882-5719901 | Msa0051620:intron | 20.0% |
| !! | CAATTATAATATAATTTGGG+TGG | - | chr1_2:5719921-5719940 | None:intergenic | 20.0% |
| !! | TATTCTATTCTAATACATTC+AGG | + | chr1_2:5719973-5719992 | Msa0051620:intron | 20.0% |
| !!! | TTTTTTTTGACAATGATACA+CGG | - | chr1_2:5720222-5720241 | None:intergenic | 20.0% |
| ! | GAGTATGGTTTATATATTTC+AGG | - | chr1_2:5716475-5716494 | None:intergenic | 25.0% |
| ! | ATTACATAAAATTTCGATGG+AGG | + | chr1_2:5716555-5716574 | Msa0051620:exon | 25.0% |
| ! | TTACATAAAATTTCGATGGA+GGG | + | chr1_2:5716556-5716575 | Msa0051620:exon | 25.0% |
| !!! | TAACCATTCTTAGTATTGAT+GGG | + | chr1_2:5716632-5716651 | Msa0051620:CDS | 25.0% |
| !!! | TGAAAGTACCTTGTATATAT+TGG | + | chr1_2:5716729-5716748 | Msa0051620:intron | 25.0% |
| ! | TTAAAATTCGAACTCTAAGT+AGG | - | chr1_2:5716765-5716784 | None:intergenic | 25.0% |
| !!! | AAAAAAGTGTCCTTTTTTAG+GGG | + | chr1_2:5717090-5717109 | Msa0051620:intron | 25.0% |
| ! | ACAAAAAATTCCCCTAAAAA+AGG | - | chr1_2:5717103-5717122 | None:intergenic | 25.0% |
| !! | TATGTTGTGGGAAAATTTTA+GGG | - | chr1_2:5717698-5717717 | None:intergenic | 25.0% |
| !!! | TGAGGAATTCAAGTTTTTTA+TGG | + | chr1_2:5717796-5717815 | Msa0051620:intron | 25.0% |
| !!! | ATTGGTTCAATTTTTTGTAG+AGG | + | chr1_2:5717844-5717863 | Msa0051620:intron | 25.0% |
| !! | AGGTATTTTCCATCATATTT+GGG | - | chr1_2:5717916-5717935 | None:intergenic | 25.0% |
| !!! | AAGGTATTTTCCATCATATT+TGG | - | chr1_2:5717917-5717936 | None:intergenic | 25.0% |
| ! | TGATAAGATGAGAAAATGAT+TGG | - | chr1_2:5718033-5718052 | None:intergenic | 25.0% |
| !! | AATCATTTTCTCATCTTATC+AGG | + | chr1_2:5718032-5718051 | Msa0051620:CDS | 25.0% |
| !!! | TTTATTTGGTCTTAAAACTG+TGG | - | chr1_2:5718318-5718337 | None:intergenic | 25.0% |
| ! | AATTGATTATTTGCACATAC+CGG | - | chr1_2:5718591-5718610 | None:intergenic | 25.0% |
| ! | ACTAAATCCCAATTACATTA+TGG | + | chr1_2:5718847-5718866 | Msa0051620:intron | 25.0% |
| ! | CATACATCCATAATGTAATT+GGG | - | chr1_2:5718857-5718876 | None:intergenic | 25.0% |
| !!! | GATGTATGCACTTTTTATTT+TGG | + | chr1_2:5718869-5718888 | Msa0051620:intron | 25.0% |
| ! | TGAAGAAAGAAACTCATATA+AGG | + | chr1_2:5719141-5719160 | Msa0051620:intron | 25.0% |
| ! | TAACAAATTCAACAAAATGC+AGG | + | chr1_2:5719680-5719699 | Msa0051620:intron | 25.0% |
| TAATGGTGTGATGAAAACAA+AGG | - | chr1_2:5716505-5716524 | None:intergenic | 30.0% | |
| ! | GTAACCATTCTTAGTATTGA+TGG | + | chr1_2:5716631-5716650 | Msa0051620:CDS | 30.0% |
| !! | AACCATTCTTAGTATTGATG+GGG | + | chr1_2:5716633-5716652 | Msa0051620:CDS | 30.0% |
| ! | TACCTTGTATATATTGGCTA+TGG | + | chr1_2:5716735-5716754 | Msa0051620:intron | 30.0% |
| !! | GTAAGTTGGTTCCATAATAA+TGG | + | chr1_2:5716977-5716996 | Msa0051620:intron | 30.0% |
| TTCAGACACTAACACTTAAT+AGG | + | chr1_2:5717248-5717267 | Msa0051620:intron | 30.0% | |
| TCAGACACTAACACTTAATA+GGG | + | chr1_2:5717249-5717268 | Msa0051620:intron | 30.0% | |
| !! | TATGTTTATTTTTCGTGGCT+AGG | - | chr1_2:5717292-5717311 | None:intergenic | 30.0% |
| ! | AATTCAGTCACAGAATTTTG+CGG | + | chr1_2:5717358-5717377 | Msa0051620:intron | 30.0% |
| !!! | AGTGGACGATTATTTTTATC+TGG | - | chr1_2:5717633-5717652 | None:intergenic | 30.0% |
| !!! | AAATTTTAGGGCAATGTTCA+AGG | - | chr1_2:5717686-5717705 | None:intergenic | 30.0% |
| ! | CTATGTTGTGGGAAAATTTT+AGG | - | chr1_2:5717699-5717718 | None:intergenic | 30.0% |
| ! | CTAAAATTTTCCCACAACAT+AGG | + | chr1_2:5717697-5717716 | Msa0051620:CDS | 30.0% |
| ! | ATTTGAGGTGTATATACTTG+AGG | + | chr1_2:5717778-5717797 | Msa0051620:intron | 30.0% |
| !!! | TCAATTTTTTGTAGAGGACT+TGG | + | chr1_2:5717850-5717869 | Msa0051620:intron | 30.0% |
| AAAGTCTTGATGTCAAATGT+GGG | - | chr1_2:5718006-5718025 | None:intergenic | 30.0% | |
| TAGTTTAGTTAAGAATCGCT+TGG | + | chr1_2:5718227-5718246 | Msa0051620:intron | 30.0% | |
| AGTTTAGTTAAGAATCGCTT+GGG | + | chr1_2:5718228-5718247 | Msa0051620:intron | 30.0% | |
| AGCTGAAACAATTATTGATC+AGG | + | chr1_2:5718271-5718290 | Msa0051620:intron | 30.0% | |
| !! | ACTGTGGTTTTTCTAAAGAT+AGG | - | chr1_2:5718302-5718321 | None:intergenic | 30.0% |
| AAAGTTTAGCATCCAAACAA+GGG | - | chr1_2:5718440-5718459 | None:intergenic | 30.0% | |
| CAACTTCACAAATAAAGATC+AGG | + | chr1_2:5718509-5718528 | Msa0051620:CDS | 30.0% | |
| GTATTATGCAATGGCATATA+TGG | + | chr1_2:5718768-5718787 | Msa0051620:intron | 30.0% | |
| ! | AGACAAAGTGGATTTAATCA+TGG | - | chr1_2:5718795-5718814 | None:intergenic | 30.0% |
| GCATACATCCATAATGTAAT+TGG | - | chr1_2:5718858-5718877 | None:intergenic | 30.0% | |
| ! | CGTTTTCTGATCATTTCAAT+AGG | + | chr1_2:5719336-5719355 | Msa0051620:CDS | 30.0% |
| !! | GATGTTTTTACTCAATCAAG+TGG | + | chr1_2:5719459-5719478 | Msa0051620:CDS | 30.0% |
| TGATAATTACCTTCGAATTC+AGG | + | chr1_2:5719533-5719552 | Msa0051620:CDS | 30.0% | |
| ! | GAAATTTTACCTGAATTCGA+AGG | - | chr1_2:5719545-5719564 | None:intergenic | 30.0% |
| TTGAAGAAACTATGCCAAAT+TGG | + | chr1_2:5719756-5719775 | Msa0051620:CDS | 30.0% | |
| TCCAGAGTCAATTTAGAAAA+TGG | + | chr1_2:5719804-5719823 | Msa0051620:CDS | 30.0% | |
| !! | ACCATTTTCTAAATTGACTC+TGG | - | chr1_2:5719808-5719827 | None:intergenic | 30.0% |
| CAAAAATACTTTCACAAGAG+AGG | + | chr1_2:5720000-5720019 | Msa0051620:CDS | 30.0% | |
| AACAAAGGCTGTATAGAGTA+TGG | - | chr1_2:5716490-5716509 | None:intergenic | 35.0% | |
| TTACCAAGTTCCCATAAGTA+GGG | - | chr1_2:5716615-5716634 | None:intergenic | 35.0% | |
| !! | ACCATTCTTAGTATTGATGG+GGG | + | chr1_2:5716634-5716653 | Msa0051620:CDS | 35.0% |
| GGAATTCAATAATTGCAGCA+GGG | - | chr1_2:5716678-5716697 | None:intergenic | 35.0% | |
| AGGAATTCAATAATTGCAGC+AGG | - | chr1_2:5716679-5716698 | None:intergenic | 35.0% | |
| AGCCATAGCCAATATATACA+AGG | - | chr1_2:5716740-5716759 | None:intergenic | 35.0% | |
| GTTCCATAATAATGGCAGTA+GGG | + | chr1_2:5716985-5717004 | Msa0051620:intron | 35.0% | |
| TTATGCAAACTATCTTGGTG+AGG | + | chr1_2:5717028-5717047 | Msa0051620:intron | 35.0% | |
| ! | TAGTGCAGCTACTTTATGAA+AGG | + | chr1_2:5717052-5717071 | Msa0051620:intron | 35.0% |
| TGGCTAGGTTTATTAGTAGT+TGG | - | chr1_2:5717277-5717296 | None:intergenic | 35.0% | |
| !! | AATTAAGTTGATCTGTGTGC+AGG | + | chr1_2:5717515-5717534 | Msa0051620:intron | 35.0% |
| GATTACTTTGATGTGATCTC+AGG | + | chr1_2:5717567-5717586 | Msa0051620:CDS | 35.0% | |
| ATATCTTTGGCAGCAAAAAG+TGG | - | chr1_2:5717651-5717670 | None:intergenic | 35.0% | |
| GTAAAAGGGCTTGATATCTT+TGG | - | chr1_2:5717664-5717683 | None:intergenic | 35.0% | |
| TCTCTCTAACAACTTGATGA+AGG | - | chr1_2:5717936-5717955 | None:intergenic | 35.0% | |
| CAAGTTGTTAGAGAGAAACT+TGG | + | chr1_2:5717940-5717959 | Msa0051620:CDS | 35.0% | |
| AAATGTGGGAACAACAATGT+TGG | - | chr1_2:5717992-5718011 | None:intergenic | 35.0% | |
| CAAAGTCTTGATGTCAAATG+TGG | - | chr1_2:5718007-5718026 | None:intergenic | 35.0% | |
| TAATGGAATGTTGCCAATTG+TGG | + | chr1_2:5718099-5718118 | Msa0051620:intron | 35.0% | |
| GTCAAGTTATTGAACTCAAG+TGG | + | chr1_2:5718197-5718216 | Msa0051620:intron | 35.0% | |
| AAGTTTAGCATCCAAACAAG+GGG | - | chr1_2:5718439-5718458 | None:intergenic | 35.0% | |
| GAAAGTTTAGCATCCAAACA+AGG | - | chr1_2:5718441-5718460 | None:intergenic | 35.0% | |
| TATTTGTGAAGTTGTGAGCA+GGG | - | chr1_2:5718503-5718522 | None:intergenic | 35.0% | |
| TTATTTGTGAAGTTGTGAGC+AGG | - | chr1_2:5718504-5718523 | None:intergenic | 35.0% | |
| ACAAATAAAGATCAGGAAGC+TGG | + | chr1_2:5718516-5718535 | Msa0051620:CDS | 35.0% | |
| ! | AAGATTGTTGTGTGCTGATA+TGG | + | chr1_2:5719023-5719042 | Msa0051620:intron | 35.0% |
| TGATCATTTCAATAGGCACT+GGG | + | chr1_2:5719343-5719362 | Msa0051620:CDS | 35.0% | |
| CCAATCTAATAATCCCCATT+TGG | - | chr1_2:5719409-5719428 | None:intergenic | 35.0% | |
| CCAAATGGGGATTATTAGAT+TGG | + | chr1_2:5719406-5719425 | Msa0051620:CDS | 35.0% | |
| ! | TTAGATTGGCTAACACATAG+TGG | + | chr1_2:5719420-5719439 | Msa0051620:CDS | 35.0% |
| TACTCAATCAAGTGGTGATA+TGG | + | chr1_2:5719467-5719486 | Msa0051620:CDS | 35.0% | |
| TTCTTCAGTAGACATTGCTA+CGG | + | chr1_2:5719725-5719744 | Msa0051620:CDS | 35.0% | |
| TGAATCATGAAACTAGATGC+CGG | - | chr1_2:5720073-5720092 | None:intergenic | 35.0% | |
| AAATTCAGCCCCCTACTTAT+GGG | + | chr1_2:5716602-5716621 | Msa0051620:CDS | 40.0% | |
| TACCAAGTTCCCATAAGTAG+GGG | - | chr1_2:5716614-5716633 | None:intergenic | 40.0% | |
| GTTACCAAGTTCCCATAAGT+AGG | - | chr1_2:5716616-5716635 | None:intergenic | 40.0% | |
| TCCCCCATCAATACTAAGAA+TGG | - | chr1_2:5716638-5716657 | None:intergenic | 40.0% | |
| !! | ATTCTTAGTATTGATGGGGG+AGG | + | chr1_2:5716637-5716656 | Msa0051620:CDS | 40.0% |
| !! | TATTGATGGGGGAGGTATTA+GGG | + | chr1_2:5716645-5716664 | Msa0051620:CDS | 40.0% |
| ATTCCTTGAATCTCACCTTC+AGG | + | chr1_2:5716693-5716712 | Msa0051620:CDS | 40.0% | |
| ATACCTGAAGGTGAGATTCA+AGG | - | chr1_2:5716699-5716718 | None:intergenic | 40.0% | |
| GGTTCCATAATAATGGCAGT+AGG | + | chr1_2:5716984-5717003 | Msa0051620:intron | 40.0% | |
| CATCCCTACTGCCATTATTA+TGG | - | chr1_2:5716991-5717010 | None:intergenic | 40.0% | |
| ! | TTTATCTGGAGCAGCTAACA+TGG | - | chr1_2:5717619-5717638 | None:intergenic | 40.0% |
| GGGCAATGTTCAAGGTAAAA+GGG | - | chr1_2:5717678-5717697 | None:intergenic | 40.0% | |
| AGGGCAATGTTCAAGGTAAA+AGG | - | chr1_2:5717679-5717698 | None:intergenic | 40.0% | |
| GCAAAGGTAATGAGATCTCT+TGG | + | chr1_2:5717886-5717905 | Msa0051620:CDS | 40.0% | |
| AAGGTAATGAGATCTCTTGG+AGG | + | chr1_2:5717889-5717908 | Msa0051620:CDS | 40.0% | |
| GAGGAGTTCAATCTCATTGA+TGG | + | chr1_2:5718546-5718565 | Msa0051620:CDS | 40.0% | |
| GAGTTCAATCTCATTGATGG+TGG | + | chr1_2:5718549-5718568 | Msa0051620:CDS | 40.0% | |
| TGGTGTTTGCGCAAATAATC+CGG | + | chr1_2:5718569-5718588 | Msa0051620:CDS | 40.0% | |
| CATTCATTGCAACTAAAGCC+TGG | - | chr1_2:5719251-5719270 | None:intergenic | 40.0% | |
| GGCTTGATTGGAAAGAAATC+AGG | - | chr1_2:5719303-5719322 | None:intergenic | 40.0% | |
| TTTCTTTCCAATCAAGCCTC+TGG | + | chr1_2:5719305-5719324 | Msa0051620:CDS | 40.0% | |
| AGAAAACGACCATATTCCAG+AGG | - | chr1_2:5719324-5719343 | None:intergenic | 40.0% | |
| CTGATCATTTCAATAGGCAC+TGG | + | chr1_2:5719342-5719361 | Msa0051620:CDS | 40.0% | |
| ATGGTAGTAGGAGTCGAATT+CGG | + | chr1_2:5719587-5719606 | Msa0051620:intron | 40.0% | |
| TATTAATGGCGTAACCTCTG+AGG | - | chr1_2:5719615-5719634 | None:intergenic | 40.0% | |
| TAGATATAGCGCAAGCTAAG+TGG | - | chr1_2:5719653-5719672 | None:intergenic | 40.0% | |
| ATGCAGGATGATACATTGAC+AGG | + | chr1_2:5719696-5719715 | Msa0051620:intron | 40.0% | |
| ! | TCTAAATTGACTCTGGAGAC+CGG | - | chr1_2:5719801-5719820 | None:intergenic | 40.0% |
| ! | CATTTTGAGCCACTAACAAC+CGG | + | chr1_2:5719828-5719847 | Msa0051620:CDS | 40.0% |
| !! | AGCATCTTCATTGGTTTCTC+CGG | - | chr1_2:5719850-5719869 | None:intergenic | 40.0% |
| GAATCATGAAACTAGATGCC+GGG | - | chr1_2:5720072-5720091 | None:intergenic | 40.0% | |
| CAAATTCAGCCCCCTACTTA+TGG | + | chr1_2:5716601-5716620 | Msa0051620:CDS | 45.0% | |
| ACCAAGTTCCCATAAGTAGG+GGG | - | chr1_2:5716613-5716632 | None:intergenic | 45.0% | |
| !! | GTATTGATGGGGGAGGTATT+AGG | + | chr1_2:5716644-5716663 | Msa0051620:CDS | 45.0% |
| !! | ATTGATGGGGGAGGTATTAG+GGG | + | chr1_2:5716646-5716665 | Msa0051620:CDS | 45.0% |
| CAATAATTGCAGCAGGGATG+AGG | - | chr1_2:5716672-5716691 | None:intergenic | 45.0% | |
| AGTTGGATGGTGAAGATGCA+AGG | + | chr1_2:5717538-5717557 | Msa0051620:CDS | 45.0% | |
| GTGATCTCAGGAACAAGTAC+AGG | + | chr1_2:5717579-5717598 | Msa0051620:CDS | 45.0% | |
| ATCTCAGGAACAAGTACAGG+AGG | + | chr1_2:5717582-5717601 | Msa0051620:CDS | 45.0% | |
| TGGTGCGACACTATTAGCAA+AGG | + | chr1_2:5717870-5717889 | Msa0051620:CDS | 45.0% | |
| CTTGGAGGACCCAAATATGA+TGG | + | chr1_2:5717904-5717923 | Msa0051620:CDS | 45.0% | |
| TTGTGAGCAGGGAGATAAGT+AGG | - | chr1_2:5718492-5718511 | None:intergenic | 45.0% | |
| TCAGGAAGCTGGAAAAGAAG+AGG | + | chr1_2:5718527-5718546 | Msa0051620:CDS | 45.0% | |
| CCATATTCCAGAGGCTTGAT+TGG | - | chr1_2:5719315-5719334 | None:intergenic | 45.0% | |
| !! | CCAATCAAGCCTCTGGAATA+TGG | + | chr1_2:5719312-5719331 | Msa0051620:CDS | 45.0% |
| CACTGGGACTGCAAAAAATG+AGG | + | chr1_2:5719359-5719378 | Msa0051620:CDS | 45.0% | |
| GGACTGCAAAAAATGAGGAG+AGG | + | chr1_2:5719364-5719383 | Msa0051620:CDS | 45.0% | |
| TGCACAAATGGCAGCCAAAT+GGG | + | chr1_2:5719392-5719411 | Msa0051620:CDS | 45.0% | |
| TTCAGTAGACATTGCTACGG+AGG | + | chr1_2:5719728-5719747 | Msa0051620:CDS | 45.0% | |
| TTGGTTTCTCCGGTTGTTAG+TGG | - | chr1_2:5719840-5719859 | None:intergenic | 45.0% | |
| !! | CCTCTTGAGAGCATCTTCAT+TGG | - | chr1_2:5719859-5719878 | None:intergenic | 45.0% |
| CCAATGAAGATGCTCTCAAG+AGG | + | chr1_2:5719856-5719875 | Msa0051620:CDS | 45.0% | |
| TCTTGCCTCTACTTGTGTGT+GGG | - | chr1_2:5720046-5720065 | None:intergenic | 45.0% | |
| TTCTTGCCTCTACTTGTGTG+TGG | - | chr1_2:5720047-5720066 | None:intergenic | 45.0% | |
| !! | ATTATTTAATTAATAATTGA+AGG | + | chr1_2:5719198-5719217 | Msa0051620:intron | 5.0% |
| GTTGATCTGTGTGCAGGAGT+TGG | + | chr1_2:5717521-5717540 | Msa0051620:intron | 50.0% | |
| ATCTGTGTGCAGGAGTTGGA+TGG | + | chr1_2:5717525-5717544 | Msa0051620:intron | 50.0% | |
| GCTTCAGAGATCCCCTTGTT+TGG | + | chr1_2:5718425-5718444 | Msa0051620:intron | 50.0% | |
| GGAGAGGTTCACTGCACAAA+TGG | + | chr1_2:5719380-5719399 | Msa0051620:CDS | 50.0% | |
| CTGCACAAATGGCAGCCAAA+TGG | + | chr1_2:5719391-5719410 | Msa0051620:CDS | 50.0% | |
| GCACAAATGGCAGCCAAATG+GGG | + | chr1_2:5719393-5719412 | Msa0051620:CDS | 50.0% | |
| AGTCGAATTCGGTACCTCAG+AGG | + | chr1_2:5719598-5719617 | Msa0051620:intron | 50.0% | |
| AGATCCCCACACACAAGTAG+AGG | + | chr1_2:5720038-5720057 | Msa0051620:CDS | 50.0% | |
| CTTGCCTCTACTTGTGTGTG+GGG | - | chr1_2:5720045-5720064 | None:intergenic | 50.0% | |
| CAAGTAGAGGCAAGAAAGCC+CGG | + | chr1_2:5720051-5720070 | Msa0051620:CDS | 50.0% | |
| GCCCCCTACTTATGGGAACT+TGG | + | chr1_2:5716609-5716628 | Msa0051620:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 5716435 | 5720312 | 5716435 | ID=Msa0051620;Name=Msa0051620 |
| chr1_2 | mRNA | 5716435 | 5720312 | 5716435 | ID=Msa0051620-mRNA-1;Parent=Msa0051620;Name=Msa0051620-mRNA-1;_AED=0.06;_eAED=0.06;_QI=136|1|0.85|1|1|1|7|224|417 |
| chr1_2 | exon | 5716435 | 5716714 | 5716435 | ID=Msa0051620-mRNA-1:exon:1765;Parent=Msa0051620-mRNA-1 |
| chr1_2 | exon | 5717537 | 5717718 | 5717537 | ID=Msa0051620-mRNA-1:exon:1766;Parent=Msa0051620-mRNA-1 |
| chr1_2 | exon | 5717864 | 5718053 | 5717864 | ID=Msa0051620-mRNA-1:exon:1767;Parent=Msa0051620-mRNA-1 |
| chr1_2 | exon | 5718426 | 5718590 | 5718426 | ID=Msa0051620-mRNA-1:exon:1768;Parent=Msa0051620-mRNA-1 |
| chr1_2 | exon | 5719252 | 5719554 | 5719252 | ID=Msa0051620-mRNA-1:exon:1769;Parent=Msa0051620-mRNA-1 |
| chr1_2 | exon | 5719702 | 5719877 | 5719702 | ID=Msa0051620-mRNA-1:exon:1770;Parent=Msa0051620-mRNA-1 |
| chr1_2 | exon | 5719995 | 5720312 | 5719995 | ID=Msa0051620-mRNA-1:exon:1771;Parent=Msa0051620-mRNA-1 |
| chr1_2 | five_prime_UTR | 5716435 | 5716570 | 5716435 | ID=Msa0051620-mRNA-1:five_prime_utr;Parent=Msa0051620-mRNA-1 |
| chr1_2 | CDS | 5716571 | 5716714 | 5716571 | ID=Msa0051620-mRNA-1:cds;Parent=Msa0051620-mRNA-1 |
| chr1_2 | CDS | 5717537 | 5717718 | 5717537 | ID=Msa0051620-mRNA-1:cds;Parent=Msa0051620-mRNA-1 |
| chr1_2 | CDS | 5717864 | 5718053 | 5717864 | ID=Msa0051620-mRNA-1:cds;Parent=Msa0051620-mRNA-1 |
| chr1_2 | CDS | 5718426 | 5718590 | 5718426 | ID=Msa0051620-mRNA-1:cds;Parent=Msa0051620-mRNA-1 |
| chr1_2 | CDS | 5719252 | 5719554 | 5719252 | ID=Msa0051620-mRNA-1:cds;Parent=Msa0051620-mRNA-1 |
| chr1_2 | CDS | 5719702 | 5719877 | 5719702 | ID=Msa0051620-mRNA-1:cds;Parent=Msa0051620-mRNA-1 |
| chr1_2 | CDS | 5719995 | 5720088 | 5719995 | ID=Msa0051620-mRNA-1:cds;Parent=Msa0051620-mRNA-1 |
| chr1_2 | three_prime_UTR | 5720089 | 5720312 | 5720089 | ID=Msa0051620-mRNA-1:three_prime_utr;Parent=Msa0051620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
