Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051730 | XP_003589236.1 | 98.561 | 417 | 6 | 0 | 1 | 417 | 1 | 417 | 0.0 | 852 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051730 | sp|O48723|PLP2_ARATH | 66.329 | 395 | 128 | 4 | 12 | 405 | 10 | 400 | 0.0 | 527 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051730 | G7I4H1 | 98.561 | 417 | 6 | 0 | 1 | 417 | 1 | 417 | 0.0 | 852 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000800 | Msa0051730 | 0.805698 | 1.177379e-49 | -8.615850e-47 |
| Msa0026420 | Msa0051730 | 0.963513 | 3.537974e-122 | -8.615850e-47 |
| Msa0034540 | Msa0051730 | 0.808302 | 3.310736e-50 | -8.615850e-47 |
| Msa0035790 | Msa0051730 | 0.827196 | 1.787730e-54 | -8.615850e-47 |
| Msa0039890 | Msa0051730 | 0.805051 | 1.609023e-49 | -8.615850e-47 |
| Msa0046680 | Msa0051730 | 0.851938 | 6.403569e-61 | -8.615850e-47 |
| Msa0051480 | Msa0051730 | 0.846769 | 1.763369e-59 | -8.615850e-47 |
| Msa0051620 | Msa0051730 | 0.989652 | 4.731371e-179 | -8.615850e-47 |
| Msa0051730 | Msa0064990 | 0.803169 | 3.963259e-49 | -8.615850e-47 |
| Msa0051730 | Msa0074860 | -0.810678 | 1.022709e-50 | -8.615850e-47 |
| Msa0051730 | Msa0083890 | 0.826204 | 3.084526e-54 | -8.615850e-47 |
| Msa0051730 | Msa0087550 | 0.812374 | 4.378174e-51 | -8.615850e-47 |
| Msa0051730 | Msa0087900 | 0.804733 | 1.874671e-49 | -8.615850e-47 |
| Msa0051730 | Msa0107830 | 0.820276 | 7.470877e-53 | -8.615850e-47 |
| Msa0051730 | Msa0129290 | 0.849332 | 3.460192e-60 | -8.615850e-47 |
| Msa0051730 | Msa0134270 | 0.813300 | 2.744423e-51 | -8.615850e-47 |
| Msa0051730 | Msa0143640 | 0.880267 | 6.316463e-70 | -8.615850e-47 |
| Msa0051730 | Msa0146090 | 0.981825 | 1.532599e-153 | -8.615850e-47 |
| Msa0051730 | Msa0146200 | 0.847122 | 1.411900e-59 | -8.615850e-47 |
| Msa0051730 | Msa0150620 | 0.803914 | 2.776627e-49 | -8.615850e-47 |
| Msa0051730 | Msa0162680 | 0.830505 | 2.828282e-55 | -8.615850e-47 |
| Msa0051730 | Msa0163540 | -0.806021 | 1.006951e-49 | -8.615850e-47 |
| Msa0051730 | Msa0167160 | -0.807097 | 5.970948e-50 | -8.615850e-47 |
| Msa0051730 | Msa0180820 | 0.819499 | 1.125043e-52 | -8.615850e-47 |
| Msa0051730 | Msa0185100 | 0.822560 | 2.218915e-53 | -8.615850e-47 |
| Msa0051730 | Msa0186240 | 0.816542 | 5.240462e-52 | -8.615850e-47 |
| Msa0051730 | Msa0191470 | 0.828234 | 1.006863e-54 | -8.615850e-47 |
| Msa0051730 | Msa0202380 | 0.825773 | 3.904536e-54 | -8.615850e-47 |
| Msa0051730 | Msa0219720 | -0.802197 | 6.288959e-49 | -8.615850e-47 |
| Msa0051730 | Msa0224210 | 0.810739 | 9.921550e-51 | -8.615850e-47 |
| Msa0051730 | Msa0232160 | -0.821364 | 4.200246e-53 | -8.615850e-47 |
| Msa0051730 | Msa0242720 | 0.803988 | 2.679560e-49 | -8.615850e-47 |
| Msa0051730 | Msa0246140 | 0.864958 | 8.355644e-65 | -8.615850e-47 |
| Msa0051730 | Msa0254640 | 0.811266 | 7.628419e-51 | -8.615850e-47 |
| Msa0051730 | Msa0267700 | 0.854237 | 1.406960e-61 | -8.615850e-47 |
| Msa0051730 | Msa0267900 | 0.800556 | 1.363466e-48 | -8.615850e-47 |
| Msa0051730 | Msa0269710 | 0.801207 | 1.003956e-48 | -8.615850e-47 |
| Msa0051730 | Msa0271700 | 0.814989 | 1.163176e-51 | -8.615850e-47 |
| Msa0051730 | Msa0271720 | 0.808193 | 3.493632e-50 | -8.615850e-47 |
| Msa0051730 | Msa0273070 | 0.810384 | 1.183918e-50 | -8.615850e-47 |
| Msa0051730 | Msa0284730 | 0.821437 | 4.039634e-53 | -8.615850e-47 |
| Msa0051730 | Msa0306310 | 0.826182 | 3.122138e-54 | -8.615850e-47 |
| Msa0051730 | Msa0310260 | -0.817372 | 3.411592e-52 | -8.615850e-47 |
| Msa0051730 | Msa0310270 | -0.810788 | 9.683975e-51 | -8.615850e-47 |
| Msa0051730 | Msa0312300 | 0.806027 | 1.003903e-49 | -8.615850e-47 |
| Msa0051730 | Msa0316230 | 0.812785 | 3.559565e-51 | -8.615850e-47 |
| Msa0051730 | Msa0319680 | 0.833800 | 4.331119e-56 | -8.615850e-47 |
| Msa0051730 | Msa0324810 | 0.831298 | 1.806620e-55 | -8.615850e-47 |
| Msa0051730 | Msa0332360 | 0.819141 | 1.356885e-52 | -8.615850e-47 |
| Msa0051730 | Msa0334480 | -0.802553 | 5.311347e-49 | -8.615850e-47 |
| Msa0051730 | Msa0336550 | -0.812444 | 4.227376e-51 | -8.615850e-47 |
| Msa0051730 | Msa0345890 | 0.807334 | 5.319127e-50 | -8.615850e-47 |
| Msa0051730 | Msa0345980 | 0.845275 | 4.496615e-59 | -8.615850e-47 |
| Msa0051730 | Msa0346170 | 0.812904 | 3.353242e-51 | -8.615850e-47 |
| Msa0051730 | Msa0353010 | 0.826011 | 3.427521e-54 | -8.615850e-47 |
| Msa0051730 | Msa0368620 | 0.800998 | 1.107679e-48 | -8.615850e-47 |
| Msa0051730 | Msa0378320 | 0.865580 | 5.325416e-65 | -8.615850e-47 |
| Msa0051730 | Msa0385320 | 0.820301 | 7.374860e-53 | -8.615850e-47 |
| Msa0051730 | Msa0389710 | 0.800608 | 1.330651e-48 | -8.615850e-47 |
| Msa0051730 | Msa0390200 | 0.821199 | 4.584815e-53 | -8.615850e-47 |
| Msa0051730 | Msa0390790 | 0.811204 | 7.867903e-51 | -8.615850e-47 |
| Msa0051730 | Msa0393100 | 0.852322 | 4.981590e-61 | -8.615850e-47 |
| Msa0051730 | Msa0398770 | 0.807112 | 5.926063e-50 | -8.615850e-47 |
| Msa0051730 | Msa0402490 | -0.806959 | 6.384748e-50 | -8.615850e-47 |
| Msa0051730 | Msa0402800 | 0.847154 | 1.384103e-59 | -8.615850e-47 |
| Msa0051730 | Msa0405210 | 0.808664 | 2.771448e-50 | -8.615850e-47 |
| Msa0051730 | Msa0421080 | 0.827913 | 1.203118e-54 | -8.615850e-47 |
| Msa0051730 | Msa0427230 | -0.808530 | 2.960463e-50 | -8.615850e-47 |
| Msa0051730 | Msa0427660 | 0.862701 | 4.205498e-64 | -8.615850e-47 |
| Msa0051730 | Msa0434400 | 0.801324 | 9.502481e-49 | -8.615850e-47 |
| Msa0051730 | Msa0438070 | 0.846651 | 1.899759e-59 | -8.615850e-47 |
| Msa0051730 | Msa0447160 | 0.827953 | 1.176474e-54 | -8.615850e-47 |
| Msa0051730 | Msa0449620 | 0.849537 | 3.034682e-60 | -8.615850e-47 |
| Msa0051730 | Msa0466850 | 0.853565 | 2.196441e-61 | -8.615850e-47 |
| Msa0051730 | Msa0473740 | -0.807222 | 5.615290e-50 | -8.615850e-47 |
| Msa0051730 | Msa0476440 | -0.811149 | 8.089360e-51 | -8.615850e-47 |
| Msa0051730 | Msa0480530 | 0.846127 | 2.640066e-59 | -8.615850e-47 |
| Msa0051730 | Msa0480540 | 0.882523 | 9.697057e-71 | -8.615850e-47 |
| Msa0051730 | Msa0480550 | 0.888918 | 3.854627e-73 | -8.615850e-47 |
| Msa0051730 | Msa0481770 | 0.848497 | 5.901412e-60 | -8.615850e-47 |
| Msa0051730 | Msa0488580 | 0.836899 | 7.137864e-57 | -8.615850e-47 |
| Msa0051730 | Msa0489070 | 0.802549 | 5.322868e-49 | -8.615850e-47 |
| Msa0051730 | Msa0493870 | 0.829579 | 4.756502e-55 | -8.615850e-47 |
| Msa0051730 | Msa0497860 | 0.857647 | 1.415325e-62 | -8.615850e-47 |
| Msa0051730 | Msa0500440 | 0.814694 | 1.352168e-51 | -8.615850e-47 |
| Msa0051730 | Msa0500770 | 0.850986 | 1.190346e-60 | -8.615850e-47 |
| Msa0051730 | Msa0508160 | 0.839441 | 1.581616e-57 | -8.615850e-47 |
| Msa0051730 | Msa0510870 | 0.808754 | 2.651798e-50 | -8.615850e-47 |
| Msa0051730 | Msa0513670 | 0.855343 | 6.725732e-62 | -8.615850e-47 |
| Msa0051730 | Msa0518490 | 0.860833 | 1.567792e-63 | -8.615850e-47 |
| Msa0051730 | Msa0522140 | 0.801887 | 7.282845e-49 | -8.615850e-47 |
| Msa0051730 | Msa0522170 | 0.818240 | 2.173833e-52 | -8.615850e-47 |
| Msa0051730 | Msa0523080 | 0.803541 | 3.318596e-49 | -8.615850e-47 |
| Msa0051730 | Msa0526840 | -0.808048 | 3.750375e-50 | -8.615850e-47 |
| Msa0051730 | Msa0537210 | 0.800015 | 1.757225e-48 | -8.615850e-47 |
| Msa0051730 | Msa0548790 | 0.811549 | 6.622184e-51 | -8.615850e-47 |
| Msa0051730 | Msa0550980 | -0.806065 | 9.856942e-50 | -8.615850e-47 |
| Msa0051730 | Msa0554770 | -0.805596 | 1.236890e-49 | -8.615850e-47 |
| Msa0051730 | Msa0557440 | -0.802416 | 5.667892e-49 | -8.615850e-47 |
| Msa0051730 | Msa0560280 | 0.826913 | 2.089671e-54 | -8.615850e-47 |
| Msa0051730 | Msa0561110 | 0.833715 | 4.547924e-56 | -8.615850e-47 |
| Msa0051730 | Msa0565120 | 0.829107 | 6.194108e-55 | -8.615850e-47 |
| Msa0051730 | Msa0565180 | 0.835685 | 1.453068e-56 | -8.615850e-47 |
| Msa0051730 | Msa0566530 | 0.829129 | 6.116484e-55 | -8.615850e-47 |
| Msa0051730 | Msa0568110 | 0.831913 | 1.274882e-55 | -8.615850e-47 |
| Msa0051730 | Msa0570460 | 0.849250 | 3.648180e-60 | -8.615850e-47 |
| Msa0051730 | Msa0572700 | 0.821985 | 3.016857e-53 | -8.615850e-47 |
| Msa0051730 | Msa0580840 | 0.876077 | 1.859875e-68 | -8.615850e-47 |
| Msa0051730 | Msa0585060 | 0.877708 | 5.058482e-69 | -8.615850e-47 |
| Msa0051730 | Msa0593600 | 0.803279 | 3.760811e-49 | -8.615850e-47 |
| Msa0051730 | Msa0614290 | 0.802941 | 4.417245e-49 | -8.615850e-47 |
| Msa0051730 | Msa0622800 | -0.810442 | 1.150311e-50 | -8.615850e-47 |
| Msa0051730 | Msa0638810 | 0.805980 | 1.027143e-49 | -8.615850e-47 |
| Msa0051730 | Msa0645380 | 0.823262 | 1.522669e-53 | -8.615850e-47 |
| Msa0051730 | Msa0645480 | 0.801812 | 7.545868e-49 | -8.615850e-47 |
| Msa0051730 | Msa0651820 | 0.811620 | 6.392249e-51 | -8.615850e-47 |
| Msa0051730 | Msa0652590 | 0.804662 | 1.939806e-49 | -8.615850e-47 |
| Msa0051730 | Msa0652610 | 0.818572 | 1.827690e-52 | -8.615850e-47 |
| Msa0051730 | Msa0657260 | 0.820977 | 5.156917e-53 | -8.615850e-47 |
| Msa0051730 | Msa0657340 | 0.826183 | 3.120223e-54 | -8.615850e-47 |
| Msa0051730 | Msa0667670 | -0.802127 | 6.502087e-49 | -8.615850e-47 |
| Msa0051730 | Msa0672090 | 0.802698 | 4.959455e-49 | -8.615850e-47 |
| Msa0051730 | Msa0685810 | -0.803042 | 4.210810e-49 | -8.615850e-47 |
| Msa0051730 | Msa0694320 | 0.805885 | 1.075547e-49 | -8.615850e-47 |
| Msa0051730 | Msa0697510 | 0.810933 | 9.009853e-51 | -8.615850e-47 |
| Msa0051730 | Msa0701430 | 0.845952 | 2.945081e-59 | -8.615850e-47 |
| Msa0051730 | Msa0701490 | 0.838869 | 2.225547e-57 | -8.615850e-47 |
| Msa0051730 | Msa0701560 | 0.837817 | 4.154723e-57 | -8.615850e-47 |
| Msa0051730 | Msa0704560 | 0.833227 | 6.020549e-56 | -8.615850e-47 |
| Msa0051730 | Msa0716620 | 0.863244 | 2.857954e-64 | -8.615850e-47 |
| Msa0051730 | Msa0727230 | 0.807596 | 4.678474e-50 | -8.615850e-47 |
| Msa0051730 | Msa0740630 | 0.818165 | 2.259555e-52 | -8.615850e-47 |
| Msa0051730 | Msa0744540 | 0.851621 | 7.876465e-61 | -8.615850e-47 |
| Msa0051730 | Msa0744550 | 0.881977 | 1.532403e-70 | -8.615850e-47 |
| Msa0051730 | Msa0744560 | 0.891998 | 2.378339e-74 | -8.615850e-47 |
| Msa0051730 | Msa0746340 | 0.856365 | 3.379309e-62 | -8.615850e-47 |
| Msa0051730 | Msa0753410 | 0.820633 | 6.186651e-53 | -8.615850e-47 |
| Msa0051730 | Msa0772350 | 0.833291 | 5.803454e-56 | -8.615850e-47 |
| Msa0051730 | Msa0794200 | 0.810779 | 9.727395e-51 | -8.615850e-47 |
| Msa0051730 | Msa0795320 | 0.841087 | 5.878532e-58 | -8.615850e-47 |
| Msa0051730 | Msa0806910 | 0.839280 | 1.741153e-57 | -8.615850e-47 |
| Msa0051730 | Msa0816630 | 0.825512 | 4.501859e-54 | -8.615850e-47 |
| Msa0051730 | Msa0820880 | 0.821987 | 3.014287e-53 | -8.615850e-47 |
| Msa0051730 | Msa0826360 | 0.863635 | 2.163098e-64 | -8.615850e-47 |
| Msa0051730 | Msa0826370 | 0.868945 | 4.474702e-66 | -8.615850e-47 |
| Msa0051730 | Msa0826380 | 0.863158 | 3.039775e-64 | -8.615850e-47 |
| Msa0051730 | Msa0826450 | 0.872150 | 3.966206e-67 | -8.615850e-47 |
| Msa0051730 | Msa0829990 | 0.800442 | 1.438798e-48 | -8.615850e-47 |
| Msa0051730 | Msa0837550 | 0.816133 | 6.468815e-52 | -8.615850e-47 |
| Msa0051730 | Msa0843740 | 0.814805 | 1.277836e-51 | -8.615850e-47 |
| Msa0051730 | Msa0848020 | 0.808279 | 3.348659e-50 | -8.615850e-47 |
| Msa0051730 | Msa0859040 | 0.810136 | 1.338862e-50 | -8.615850e-47 |
| Msa0051730 | Msa0863940 | 0.826901 | 2.103081e-54 | -8.615850e-47 |
| Msa0051730 | Msa0865810 | 0.884317 | 2.125739e-71 | -8.615850e-47 |
| Msa0051730 | Msa0865820 | 0.859950 | 2.901208e-63 | -8.615850e-47 |
| Msa0051730 | Msa0865830 | 0.879692 | 1.012427e-69 | -8.615850e-47 |
| Msa0051730 | Msa0874750 | 0.824657 | 7.167584e-54 | -8.615850e-47 |
| Msa0051730 | Msa0879940 | -0.812604 | 3.899396e-51 | -8.615850e-47 |
| Msa0051730 | Msa0881510 | 0.808506 | 2.995488e-50 | -8.615850e-47 |
| Msa0051730 | Msa0906680 | 0.803755 | 2.996716e-49 | -8.615850e-47 |
| Msa0051730 | Msa0921790 | 0.828484 | 8.762728e-55 | -8.615850e-47 |
| Msa0051730 | Msa0945320 | 0.816136 | 6.460995e-52 | -8.615850e-47 |
| Msa0051730 | Msa0960580 | 0.822292 | 2.561447e-53 | -8.615850e-47 |
| Msa0051730 | Msa0970410 | 0.833271 | 5.867937e-56 | -8.615850e-47 |
| Msa0051730 | Msa0970940 | -0.801938 | 7.109476e-49 | -8.615850e-47 |
| Msa0051730 | Msa0976400 | 0.846290 | 2.382957e-59 | -8.615850e-47 |
| Msa0051730 | Msa0984230 | -0.807097 | 5.970948e-50 | -8.615850e-47 |
| Msa0051730 | Msa1003730 | 0.805034 | 1.622295e-49 | -8.615850e-47 |
| Msa0051730 | Msa1003920 | 0.813711 | 2.228613e-51 | -8.615850e-47 |
| Msa0051730 | Msa1018210 | -0.806096 | 9.708504e-50 | -8.615850e-47 |
| Msa0051730 | Msa1023430 | 0.827895 | 1.215345e-54 | -8.615850e-47 |
| Msa0051730 | Msa1026080 | 0.807175 | 5.746072e-50 | -8.615850e-47 |
| Msa0051730 | Msa1027910 | 0.817051 | 4.029832e-52 | -8.615850e-47 |
| Msa0051730 | Msa1030210 | 0.851038 | 1.150956e-60 | -8.615850e-47 |
| Msa0051730 | Msa1031780 | 0.867401 | 1.406727e-65 | -8.615850e-47 |
| Msa0051730 | Msa1035050 | 0.827182 | 1.801419e-54 | -8.615850e-47 |
| Msa0051730 | Msa1037360 | 0.804138 | 2.493819e-49 | -8.615850e-47 |
| Msa0051730 | Msa1041250 | 0.803975 | 2.696761e-49 | -8.615850e-47 |
| Msa0051730 | Msa1061840 | 0.838247 | 3.221174e-57 | -8.615850e-47 |
| Msa0051730 | Msa1062060 | 0.802455 | 5.565541e-49 | -8.615850e-47 |
| Msa0051730 | Msa1064240 | 0.821214 | 4.548240e-53 | -8.615850e-47 |
| Msa0051730 | Msa1067800 | 0.816377 | 5.707962e-52 | -8.615850e-47 |
| Msa0051730 | Msa1069250 | 0.857080 | 2.082246e-62 | -8.615850e-47 |
| Msa0051730 | Msa1071350 | 0.816072 | 6.676767e-52 | -8.615850e-47 |
| Msa0051730 | Msa1075090 | 0.819525 | 1.109431e-52 | -8.615850e-47 |
| Msa0051730 | Msa1080650 | 0.811122 | 8.199246e-51 | -8.615850e-47 |
| Msa0051730 | Msa1084340 | -0.804845 | 1.776763e-49 | -8.615850e-47 |
| Msa0051730 | Msa1095590 | 0.810394 | 1.178227e-50 | -8.615850e-47 |
| Msa0051730 | Msa1102210 | 0.809013 | 2.333286e-50 | -8.615850e-47 |
| Msa0051730 | Msa1107250 | 0.801877 | 7.318497e-49 | -8.615850e-47 |
| Msa0051730 | Msa1107510 | 0.841119 | 5.764963e-58 | -8.615850e-47 |
| Msa0051730 | Msa1110900 | 0.828226 | 1.011401e-54 | -8.615850e-47 |
| Msa0051730 | Msa1113090 | 0.825193 | 5.356290e-54 | -8.615850e-47 |
| Msa0051730 | Msa1118720 | 0.852115 | 5.703121e-61 | -8.615850e-47 |
| Msa0051730 | Msa1120580 | 0.834731 | 2.529338e-56 | -8.615850e-47 |
| Msa0051730 | Msa1126440 | 0.800415 | 1.456758e-48 | -8.615850e-47 |
| Msa0051730 | Msa1142390 | 0.822417 | 2.395750e-53 | -8.615850e-47 |
| Msa0051730 | Msa1150920 | 0.807977 | 3.882676e-50 | -8.615850e-47 |
| Msa0051730 | Msa1151070 | 0.830031 | 3.691104e-55 | -8.615850e-47 |
| Msa0051730 | Msa1154240 | 0.815977 | 7.010966e-52 | -8.615850e-47 |
| Msa0051730 | Msa1157110 | 0.825759 | 3.933948e-54 | -8.615850e-47 |
| Msa0051730 | Msa1157200 | 0.829554 | 4.824647e-55 | -8.615850e-47 |
| Msa0051730 | Msa1161550 | -0.802372 | 5.787650e-49 | -8.615850e-47 |
| Msa0051730 | Msa1164230 | 0.813719 | 2.220359e-51 | -8.615850e-47 |
| Msa0051730 | Msa1165670 | 0.807691 | 4.466347e-50 | -8.615850e-47 |
| Msa0051730 | Msa1174280 | 0.848064 | 7.775339e-60 | -8.615850e-47 |
| Msa0051730 | Msa1185270 | 0.801795 | 7.605341e-49 | -8.615850e-47 |
| Msa0051730 | Msa1202110 | 0.848580 | 5.599720e-60 | -8.615850e-47 |
| Msa0051730 | Msa1211610 | 0.870291 | 1.630962e-66 | -8.615850e-47 |
| Msa0051730 | Msa1217260 | 0.815994 | 6.950563e-52 | -8.615850e-47 |
| Msa0051730 | Msa1223560 | 0.854035 | 1.609546e-61 | -8.615850e-47 |
| Msa0051730 | Msa1224510 | 0.856280 | 3.578367e-62 | -8.615850e-47 |
| Msa0051730 | Msa1235960 | -0.818347 | 2.055080e-52 | -8.615850e-47 |
| Msa0051730 | Msa1235990 | -0.822682 | 2.078308e-53 | -8.615850e-47 |
| Msa0051730 | Msa1254870 | 0.849000 | 4.282521e-60 | -8.615850e-47 |
| Msa0051730 | Msa1256600 | 0.832228 | 1.065677e-55 | -8.615850e-47 |
| Msa0051730 | Msa1262540 | 0.831958 | 1.242195e-55 | -8.615850e-47 |
| Msa0051730 | Msa1263500 | 0.841855 | 3.689321e-58 | -8.615850e-47 |
| Msa0051730 | Msa1299480 | 0.875446 | 3.062567e-68 | -8.615850e-47 |
| Msa0051730 | Msa1308430 | -0.800160 | 1.642006e-48 | -8.615850e-47 |
| Msa0051730 | Msa1315880 | -0.807856 | 4.120195e-50 | -8.615850e-47 |
| Msa0051730 | Msa1316090 | -0.811349 | 7.318674e-51 | -8.615850e-47 |
| Msa0051730 | Msa1322180 | 0.823785 | 1.148992e-53 | -8.615850e-47 |
| Msa0051730 | Msa1328430 | 0.848029 | 7.951922e-60 | -8.615850e-47 |
| Msa0051730 | Msa1331950 | 0.813345 | 2.683300e-51 | -8.615850e-47 |
| Msa0051730 | Msa1333700 | 0.854246 | 1.399016e-61 | -8.615850e-47 |
| Msa0051730 | Msa1341850 | -0.808208 | 3.466625e-50 | -8.615850e-47 |
| Msa0051730 | Msa1344870 | -0.806909 | 6.543252e-50 | -8.615850e-47 |
| Msa0051730 | Msa1348340 | -0.811389 | 7.175408e-51 | -8.615850e-47 |
| Msa0051730 | Msa1349830 | 0.870136 | 1.832130e-66 | -8.615850e-47 |
| Msa0051730 | Msa1359770 | 0.815553 | 8.714124e-52 | -8.615850e-47 |
| Msa0051730 | Msa1366480 | 0.818269 | 2.140289e-52 | -8.615850e-47 |
| Msa0051730 | Msa1372460 | -0.800319 | 1.523627e-48 | -8.615850e-47 |
| Msa0051730 | Msa1372470 | -0.821403 | 4.113999e-53 | -8.615850e-47 |
| Msa0051730 | Msa1377050 | 0.841457 | 4.697197e-58 | -8.615850e-47 |
| Msa0051730 | Msa1382740 | 0.856900 | 2.352451e-62 | -8.615850e-47 |
| Msa0051730 | Msa1383790 | 0.809162 | 2.168390e-50 | -8.615850e-47 |
| Msa0051730 | Msa1387610 | 0.851667 | 7.645520e-61 | -8.615850e-47 |
| Msa0051730 | Msa1389630 | 0.817971 | 2.500084e-52 | -8.615850e-47 |
| Msa0051730 | Msa1395380 | -0.802316 | 5.945304e-49 | -8.615850e-47 |
| Msa0051730 | Msa1396160 | 0.829602 | 4.696706e-55 | -8.615850e-47 |
| Msa0051730 | Msa1398120 | 0.853547 | 2.223792e-61 | -8.615850e-47 |
| Msa0051730 | Msa1399930 | 0.837033 | 6.596987e-57 | -8.615850e-47 |
| Msa0051730 | Msa1401110 | 0.837223 | 5.901682e-57 | -8.615850e-47 |
| Msa0051730 | Msa1410500 | -0.802656 | 5.059250e-49 | -8.615850e-47 |
| Msa0051730 | Msa1422230 | 0.803810 | 2.918549e-49 | -8.615850e-47 |
| Msa0051730 | Msa1427000 | 0.835783 | 1.372424e-56 | -8.615850e-47 |
| Msa0051730 | Msa1432180 | 0.811613 | 6.414136e-51 | -8.615850e-47 |
| Msa0051730 | Msa1434850 | -0.813707 | 2.233044e-51 | -8.615850e-47 |
| Msa0051730 | Msa1434860 | -0.819885 | 9.181315e-53 | -8.615850e-47 |
| Msa0051730 | Msa1435320 | 0.817655 | 2.946709e-52 | -8.615850e-47 |
| Msa0051730 | Msa1438160 | 0.803794 | 2.940506e-49 | -8.615850e-47 |
| Msa0051730 | Msa1439780 | 0.833442 | 5.320542e-56 | -8.615850e-47 |
| Msa0051730 | Msa1443400 | 0.814309 | 1.645386e-51 | -8.615850e-47 |
| Msa0051730 | Msa1448040 | 0.815209 | 1.039334e-51 | -8.615850e-47 |
| Msa0051730 | Msa1449470 | 0.856464 | 3.160895e-62 | -8.615850e-47 |
| Msa0051730 | Msa1452080 | -0.801960 | 7.034468e-49 | -8.615850e-47 |
| Msa0051730 | Msa1453070 | -0.806391 | 8.414705e-50 | -8.615850e-47 |
| Msa0051730 | Msa1453600 | 0.844130 | 9.148794e-59 | -8.615850e-47 |
| Msa0051730 | Msa1453890 | 0.806378 | 8.469618e-50 | -8.615850e-47 |
| Msa0051730 | Msa1454300 | -0.803537 | 3.324589e-49 | -8.615850e-47 |
| Msa0051730 | Msa1459920 | 0.853702 | 2.006750e-61 | -8.615850e-47 |
| Msa0051730 | Msa1459930 | 0.867654 | 1.166816e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051730 | MtrunA17_Chr1g0153781 | 98.561 | 417 | 6 | 0 | 1 | 417 | 1 | 417 | 0.0 | 852 |
| Msa0051730 | MtrunA17_Chr3g0133691 | 78.164 | 403 | 86 | 2 | 5 | 407 | 4 | 404 | 0.0 | 643 |
| Msa0051730 | MtrunA17_Chr3g0133681 | 76.427 | 403 | 93 | 2 | 5 | 407 | 4 | 404 | 0.0 | 633 |
| Msa0051730 | MtrunA17_Chr5g0402441 | 57.560 | 377 | 155 | 3 | 19 | 394 | 14 | 386 | 1.04e-158 | 453 |
| Msa0051730 | MtrunA17_Chr5g0402451 | 55.076 | 394 | 170 | 4 | 9 | 400 | 1 | 389 | 1.57e-158 | 452 |
| Msa0051730 | MtrunA17_Chr8g0335581 | 43.237 | 414 | 195 | 13 | 11 | 410 | 11 | 398 | 3.01e-100 | 304 |
| Msa0051730 | MtrunA17_Chr8g0335651 | 46.329 | 395 | 174 | 8 | 10 | 399 | 22 | 383 | 1.20e-94 | 290 |
| Msa0051730 | MtrunA17_Chr8g0335611 | 42.569 | 397 | 199 | 11 | 11 | 399 | 22 | 397 | 9.45e-94 | 288 |
| Msa0051730 | MtrunA17_Chr8g0335621 | 42.065 | 397 | 201 | 11 | 11 | 399 | 53 | 428 | 3.15e-92 | 285 |
| Msa0051730 | MtrunA17_Chr8g0335631 | 42.998 | 407 | 201 | 11 | 11 | 410 | 22 | 404 | 2.94e-88 | 274 |
| Msa0051730 | MtrunA17_Chr8g0335591 | 40.441 | 408 | 212 | 11 | 10 | 409 | 21 | 405 | 4.69e-85 | 266 |
| Msa0051730 | MtrunA17_Chr1g0199801 | 28.501 | 407 | 253 | 14 | 21 | 412 | 75 | 458 | 2.70e-37 | 141 |
| Msa0051730 | MtrunA17_Chr7g0259871 | 28.736 | 261 | 147 | 9 | 23 | 269 | 32 | 267 | 3.70e-25 | 105 |
| Msa0051730 | MtrunA17_Chr1g0185551 | 25.513 | 341 | 217 | 12 | 23 | 358 | 32 | 340 | 4.81e-25 | 105 |
| Msa0051730 | MtrunA17_Chr2g0292051 | 27.190 | 331 | 189 | 12 | 6 | 330 | 54 | 338 | 1.46e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051730 | AT2G26560.1 | 66.329 | 395 | 128 | 4 | 12 | 405 | 10 | 400 | 0.0 | 527 |
| Msa0051730 | AT4G37070.2 | 59.591 | 391 | 156 | 2 | 13 | 403 | 11 | 399 | 5.19e-169 | 480 |
| Msa0051730 | AT4G37050.1 | 60.804 | 398 | 148 | 2 | 14 | 404 | 28 | 424 | 3.20e-168 | 478 |
| Msa0051730 | AT4G37060.1 | 57.468 | 395 | 166 | 2 | 14 | 408 | 12 | 404 | 9.62e-165 | 469 |
| Msa0051730 | AT4G37070.3 | 59.200 | 375 | 151 | 2 | 13 | 387 | 11 | 383 | 1.58e-160 | 457 |
| Msa0051730 | AT4G37070.1 | 59.200 | 375 | 151 | 2 | 13 | 387 | 11 | 383 | 1.58e-160 | 457 |
| Msa0051730 | AT4G37060.2 | 53.286 | 426 | 166 | 3 | 14 | 408 | 12 | 435 | 3.72e-158 | 454 |
| Msa0051730 | AT4G37070.4 | 57.600 | 375 | 146 | 3 | 13 | 387 | 11 | 372 | 1.89e-152 | 436 |
| Msa0051730 | AT5G43590.1 | 53.077 | 390 | 172 | 4 | 13 | 399 | 6 | 387 | 7.94e-130 | 380 |
| Msa0051730 | AT5G43590.2 | 53.077 | 390 | 172 | 4 | 13 | 399 | 73 | 454 | 5.75e-129 | 380 |
| Msa0051730 | AT3G54950.1 | 27.569 | 399 | 258 | 11 | 21 | 414 | 98 | 470 | 1.42e-35 | 137 |
| Msa0051730 | AT4G29800.1 | 28.256 | 407 | 255 | 14 | 21 | 412 | 121 | 505 | 1.92e-35 | 137 |
| Msa0051730 | AT4G29800.2 | 28.186 | 408 | 255 | 14 | 21 | 412 | 121 | 506 | 2.80e-35 | 137 |
| Msa0051730 | AT2G39220.1 | 29.639 | 388 | 243 | 15 | 21 | 402 | 108 | 471 | 1.75e-34 | 134 |
| Msa0051730 | AT3G63200.1 | 28.707 | 317 | 192 | 10 | 23 | 333 | 32 | 320 | 1.12e-30 | 122 |
Find 89 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTATGGTTTATATATTTC+AGG | 0.196146 | 1_2:-5844074 | None:intergenic |
| AGGGCAATGTTCAAGGTAAA+AGG | 0.209370 | 1_2:-5845243 | None:intergenic |
| TTAATAAATTCTCACCAATT+TGG | 0.220880 | 1_2:-5847938 | None:intergenic |
| TGATAATTACCTTCGAATTC+AGG | 0.242193 | 1_2:+5847701 | Msa0051730:CDS |
| TCCAGAGTCAATTTAGAAAA+TGG | 0.281008 | 1_2:+5847972 | Msa0051730:CDS |
| TTGAAGAAACTATGCCAAAT+TGG | 0.298509 | 1_2:+5847924 | Msa0051730:CDS |
| GTAAAAGGGCTTGATATCTT+TGG | 0.318803 | 1_2:-5845228 | None:intergenic |
| GCTTCAGAGATCCCCTTGTT+TGG | 0.326246 | 1_2:+5846593 | Msa0051730:intron |
| TACTCAATCAAGTGGTGATA+TGG | 0.328294 | 1_2:+5847635 | Msa0051730:CDS |
| CCATATTCCAGAGGCTTGAT+TGG | 0.331569 | 1_2:-5847480 | None:intergenic |
| CCAATCAAGCCTCTGGAATA+TGG | 0.340675 | 1_2:+5847480 | Msa0051730:CDS |
| GTAACCATTCTTAGTATTGA+TGG | 0.353477 | 1_2:+5844232 | Msa0051730:CDS |
| ATTCCTTGAATCTCACCTTC+AGG | 0.368436 | 1_2:+5844294 | Msa0051730:CDS |
| CCAAATGGGGATTATTAGAT+TGG | 0.382105 | 1_2:+5847574 | Msa0051730:CDS |
| TGCACAAATGGCAGCCAAAT+GGG | 0.384292 | 1_2:+5847560 | Msa0051730:CDS |
| AACAAAGGCTGTATAGAGTA+TGG | 0.387465 | 1_2:-5844089 | None:intergenic |
| TTGGTTTCTCCGGTTGTTAG+TGG | 0.394804 | 1_2:-5848005 | None:intergenic |
| TTTCTTTCCAATCAAGCCTC+TGG | 0.407655 | 1_2:+5847473 | Msa0051730:CDS |
| CCAATCTAATAATCCCCATT+TGG | 0.412692 | 1_2:-5847574 | None:intergenic |
| TGAGAATTTATTAAAGAAAC+CGG | 0.414005 | 1_2:+5847947 | Msa0051730:CDS |
| AGCATCTTCATTGGTTTCTC+CGG | 0.415887 | 1_2:-5848015 | None:intergenic |
| GGCTTGATTGGAAAGAAATC+AGG | 0.418966 | 1_2:-5847468 | None:intergenic |
| CTGATCATTTCAATAGGCAC+TGG | 0.431825 | 1_2:+5847510 | Msa0051730:CDS |
| TCTTGCCTCTACTTGTGTGT+GGG | 0.432968 | 1_2:-5848206 | None:intergenic |
| CCTCTTGAGAGCATCTTCAT+TGG | 0.439200 | 1_2:-5848024 | None:intergenic |
| ATATTAATTACCTATGTTGT+GGG | 0.443069 | 1_2:-5845274 | None:intergenic |
| GCAAAGGTAATGAGATCTCT+TGG | 0.450334 | 1_2:+5845453 | Msa0051730:CDS |
| CTGCACAAATGGCAGCCAAA+TGG | 0.451475 | 1_2:+5847559 | Msa0051730:CDS |
| AGTATGGTTTATATATTTCA+GGG | 0.460216 | 1_2:-5844073 | None:intergenic |
| ACAAATAAAGATCAGGAAGC+TGG | 0.460216 | 1_2:+5846684 | Msa0051730:CDS |
| AGGAATTCAATAATTGCAGC+AGG | 0.463149 | 1_2:-5844277 | None:intergenic |
| GGGCAATGTTCAAGGTAAAA+GGG | 0.470464 | 1_2:-5845242 | None:intergenic |
| TAACCATTCTTAGTATTGAT+GGG | 0.470961 | 1_2:+5844233 | Msa0051730:CDS |
| GAGGAGTTCAATCTCATTGA+TGG | 0.474688 | 1_2:+5846714 | Msa0051730:CDS |
| GATTACTTTGATGTGATCTC+AGG | 0.483035 | 1_2:+5845134 | Msa0051730:CDS |
| CTTGGAGGACCCAAATATGA+TGG | 0.485178 | 1_2:+5845471 | Msa0051730:CDS |
| TATATTAATTACCTATGTTG+TGG | 0.490009 | 1_2:-5845275 | None:intergenic |
| CAAGTTGTTAGAGAGAAACT+TGG | 0.490786 | 1_2:+5845507 | Msa0051730:CDS |
| TTATTTGTGAAGTTGTGAGC+AGG | 0.494731 | 1_2:-5846669 | None:intergenic |
| TTGTGAGCAGGGAGATAAGT+AGG | 0.496729 | 1_2:-5846657 | None:intergenic |
| TGGTGTTTGCGCAAATAATC+CGG | 0.497493 | 1_2:+5846737 | Msa0051730:CDS |
| CAAGTAGAGGCAAGAAAGCC+CGG | 0.498544 | 1_2:+5848214 | Msa0051730:CDS |
| CAATAATTGCAGCAGGGATG+AGG | 0.499347 | 1_2:-5844270 | None:intergenic |
| GGAGAGGTTCACTGCACAAA+TGG | 0.505314 | 1_2:+5847548 | Msa0051730:CDS |
| CAACTTCACAAATAAAGATC+AGG | 0.505940 | 1_2:+5846677 | Msa0051730:CDS |
| TTCTTGCCTCTACTTGTGTG+TGG | 0.506302 | 1_2:-5848207 | None:intergenic |
| TCTCTCTAACAACTTGATGA+AGG | 0.508522 | 1_2:-5845500 | None:intergenic |
| TCTAAATTGACTCTGGAGAC+CGG | 0.508962 | 1_2:-5847966 | None:intergenic |
| TGATAAGATGAGAAAATGAT+TGG | 0.523309 | 1_2:-5845597 | None:intergenic |
| ATACCTGAAGGTGAGATTCA+AGG | 0.523660 | 1_2:-5844297 | None:intergenic |
| GAAATTACATAAAATTTCGA+TGG | 0.526047 | 1_2:+5844153 | Msa0051730:exon |
| TTACCAAGTTCCCATAAGTA+GGG | 0.536098 | 1_2:-5844213 | None:intergenic |
| GTTACCAAGTTCCCATAAGT+AGG | 0.539081 | 1_2:-5844214 | None:intergenic |
| GTGATCTCAGGAACAAGTAC+AGG | 0.541512 | 1_2:+5845146 | Msa0051730:CDS |
| ATGCAGGATGATACATTGAC+AGG | 0.541552 | 1_2:+5847864 | Msa0051730:intron |
| ATTACATAAAATTTCGATGG+AGG | 0.541674 | 1_2:+5844156 | Msa0051730:exon |
| TGAATCATGAAACTAGATGC+CGG | 0.546406 | 1_2:-5848233 | None:intergenic |
| TTACATAAAATTTCGATGGA+GGG | 0.558119 | 1_2:+5844157 | Msa0051730:exon |
| GAATCATGAAACTAGATGCC+GGG | 0.560416 | 1_2:-5848232 | None:intergenic |
| TTAGATTGGCTAACACATAG+TGG | 0.560851 | 1_2:+5847588 | Msa0051730:CDS |
| TGATCATTTCAATAGGCACT+GGG | 0.562419 | 1_2:+5847511 | Msa0051730:CDS |
| TATTTGTGAAGTTGTGAGCA+GGG | 0.563364 | 1_2:-5846668 | None:intergenic |
| CTTGCCTCTACTTGTGTGTG+GGG | 0.564230 | 1_2:-5848205 | None:intergenic |
| AACCATTCTTAGTATTGATG+GGG | 0.567798 | 1_2:+5844234 | Msa0051730:CDS |
| CAAAGTCTTGATGTCAAATG+TGG | 0.569923 | 1_2:-5845571 | None:intergenic |
| ATCTGTGTGCAGGAGTTGGA+TGG | 0.573566 | 1_2:+5845092 | Msa0051730:intron |
| TTCTTCAGTAGACATTGCTA+CGG | 0.581643 | 1_2:+5847893 | Msa0051730:CDS |
| TTTATCTGGAGCAGCTAACA+TGG | 0.585474 | 1_2:-5845183 | None:intergenic |
| GAAAGTTTAGCATCCAAACA+AGG | 0.590523 | 1_2:-5846606 | None:intergenic |
| TCAGGAAGCTGGAAAAGAAG+AGG | 0.603502 | 1_2:+5846695 | Msa0051730:CDS |
| TTCAGTAGACATTGCTACGG+AGG | 0.603616 | 1_2:+5847896 | Msa0051730:CDS |
| CCAATGAAGATGCTCTCAAG+AGG | 0.607291 | 1_2:+5848024 | Msa0051730:CDS |
| AGTTGGATGGTGAAGATGCA+AGG | 0.613978 | 1_2:+5845105 | Msa0051730:CDS |
| AAAGTTTAGCATCCAAACAA+GGG | 0.615469 | 1_2:-5846605 | None:intergenic |
| AGATCCCCACACACAAGTAG+AGG | 0.617675 | 1_2:+5848201 | Msa0051730:CDS |
| GCACAAATGGCAGCCAAATG+GGG | 0.620024 | 1_2:+5847561 | Msa0051730:CDS |
| AAGGTAATGAGATCTCTTGG+AGG | 0.632690 | 1_2:+5845456 | Msa0051730:CDS |
| TACCAAGTTCCCATAAGTAG+GGG | 0.646419 | 1_2:-5844212 | None:intergenic |
| ATCTCAGGAACAAGTACAGG+AGG | 0.646501 | 1_2:+5845149 | Msa0051730:CDS |
| ACCATTCTTAGTATTGATGG+GGG | 0.646720 | 1_2:+5844235 | Msa0051730:CDS |
| TGGTGCGACACTATTAGCAA+AGG | 0.647189 | 1_2:+5845437 | Msa0051730:CDS |
| GGAATTCAATAATTGCAGCA+GGG | 0.658810 | 1_2:-5844276 | None:intergenic |
| GAGTTCAATCTCATTGATGG+TGG | 0.662016 | 1_2:+5846717 | Msa0051730:CDS |
| AAATGTGGGAACAACAATGT+TGG | 0.662239 | 1_2:-5845556 | None:intergenic |
| AAGTTTAGCATCCAAACAAG+GGG | 0.668793 | 1_2:-5846604 | None:intergenic |
| ACCAAGTTCCCATAAGTAGG+GGG | 0.679072 | 1_2:-5844211 | None:intergenic |
| AAAGTCTTGATGTCAAATGT+GGG | 0.692840 | 1_2:-5845570 | None:intergenic |
| TAATGGTGTGATGAAAACAA+AGG | 0.706401 | 1_2:-5844104 | None:intergenic |
| AGAAAACGACCATATTCCAG+AGG | 0.710413 | 1_2:-5847489 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATATATATATATATTA+TGG | + | chr1_2:5845653-5845672 | Msa0051730:intron | 0.0% |
| !! | TTCAAATAATAAAGTAATAT+TGG | - | chr1_2:5845051-5845070 | None:intergenic | 10.0% |
| !!! | TCTAAAAAATAAGTTTTTAT+TGG | + | chr1_2:5845393-5845412 | Msa0051730:intron | 10.0% |
| !!! | ATTGTTAATCATTTAAAATT+TGG | + | chr1_2:5845999-5846018 | Msa0051730:intron | 10.0% |
| !!! | AAAAACTGAATTTTTTTTTA+AGG | - | chr1_2:5846123-5846142 | None:intergenic | 10.0% |
| !! | AAAAAATCGTAAAAAAAATT+CGG | - | chr1_2:5846148-5846167 | None:intergenic | 10.0% |
| !!! | AATTAAAACTGAAAAATTTT+CGG | - | chr1_2:5846172-5846191 | None:intergenic | 10.0% |
| !! | TTAAAAGTCAAAAAAAAATT+CGG | - | chr1_2:5846209-5846228 | None:intergenic | 10.0% |
| !!! | GAAAAAAAAAAAATTTTTGA+AGG | + | chr1_2:5846276-5846295 | Msa0051730:intron | 10.0% |
| !!! | ATTGTTAATCATTTAAAATT+TGG | - | chr1_2:5845999-5846018 | None:intergenic | 10.0% |
| !! | AGACAAAATATATAATTTAT+TGG | - | chr1_2:5846501-5846520 | None:intergenic | 10.0% |
| !! | ATTATTCAATTAATAATTGA+AGG | + | chr1_2:5847366-5847385 | Msa0051730:intron | 10.0% |
| !!! | AAAAAAAAAAAAAAAGGTAT+AGG | - | chr1_2:5847734-5847753 | None:intergenic | 10.0% |
| !!! | ACCTTTTTTTTTTTTTTTTA+TGG | + | chr1_2:5847736-5847755 | Msa0051730:intron | 10.0% |
| !! | ACCATAAAAAAAAAAAAAAA+AGG | - | chr1_2:5847740-5847759 | None:intergenic | 10.0% |
| !!! | TTTTTTGGAGTAAATATTAA+TGG | - | chr1_2:5844124-5844143 | None:intergenic | 15.0% |
| !!! | AATTTCTCTTAAGTTTTTTT+TGG | - | chr1_2:5844139-5844158 | None:intergenic | 15.0% |
| !!! | TCATTTTATCTATATGTTTT+AGG | - | chr1_2:5844833-5844852 | None:intergenic | 15.0% |
| !!! | TAATTTATGTTTATTTTTCG+TGG | - | chr1_2:5844928-5844947 | None:intergenic | 15.0% |
| !! | AAAAATCGTAAAAAAAATTC+GGG | - | chr1_2:5846147-5846166 | None:intergenic | 15.0% |
| !!! | ATTAAAACTGAAAAATTTTC+GGG | - | chr1_2:5846171-5846190 | None:intergenic | 15.0% |
| !! | TAAATTAATTAGTTGTTGAT+TGG | + | chr1_2:5846781-5846800 | Msa0051730:intron | 15.0% |
| !! | TTGTTTATTTATATATTCGT+TGG | - | chr1_2:5846863-5846882 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTATGGTAGT+AGG | + | chr1_2:5847743-5847762 | Msa0051730:intron | 15.0% |
| !! | AGTATGGTTTATATATTTCA+GGG | - | chr1_2:5844076-5844095 | None:intergenic | 20.0% |
| !! | GAAATTACATAAAATTTCGA+TGG | + | chr1_2:5844153-5844172 | Msa0051730:exon | 20.0% |
| !! | CATATATATAATATACCTGA+AGG | - | chr1_2:5844312-5844331 | None:intergenic | 20.0% |
| !! | TTAAAATTCTAACTCTAAGT+AGG | - | chr1_2:5844366-5844385 | None:intergenic | 20.0% |
| !!! | TTGTTTTCTTTTTGCATAAA+TGG | + | chr1_2:5844482-5844501 | Msa0051730:intron | 20.0% |
| !!! | GAAAGTTTTTATATGTAAGT+TGG | + | chr1_2:5844592-5844611 | Msa0051730:intron | 20.0% |
| !! | ATTTATTATGCAAACTATCT+TGG | + | chr1_2:5844652-5844671 | Msa0051730:intron | 20.0% |
| !!! | AAAAAAAAGTGTCCTTTTTT+AGG | + | chr1_2:5844718-5844737 | Msa0051730:intron | 20.0% |
| !!! | AAAAAAAGTGTCCTTTTTTA+GGG | + | chr1_2:5844719-5844738 | Msa0051730:intron | 20.0% |
| !! | AGATTTAACAGTTTATACAA+CGG | + | chr1_2:5844791-5844810 | Msa0051730:intron | 20.0% |
| !! | ATATTAATTACCTATGTTGT+GGG | - | chr1_2:5845277-5845296 | None:intergenic | 20.0% |
| !! | TATATTAATTACCTATGTTG+TGG | - | chr1_2:5845278-5845297 | None:intergenic | 20.0% |
| !! | CTTCTATTTGTAATTATTTG+AGG | + | chr1_2:5845330-5845349 | Msa0051730:intron | 20.0% |
| !!! | ATGTATTTTAAATCCACAAT+TGG | - | chr1_2:5845686-5845705 | None:intergenic | 20.0% |
| !! | TTAAATGATTAACAATTGCA+GGG | - | chr1_2:5846397-5846416 | None:intergenic | 20.0% |
| !! | TTTAAATGATTAACAATTGC+AGG | - | chr1_2:5846396-5846415 | None:intergenic | 20.0% |
| !! | AAACAAAAAAAAATAAGCCA+GGG | - | chr1_2:5846095-5846114 | None:intergenic | 20.0% |
| !! | AAAACAAAAAAAAATAAGCC+AGG | - | chr1_2:5846096-5846115 | None:intergenic | 20.0% |
| !! | TTTAAATGATTAACAATTGC+AGG | + | chr1_2:5846396-5846415 | Msa0051730:intron | 20.0% |
| !! | TTAAATGATTAACAATTGCA+GGG | + | chr1_2:5846397-5846416 | Msa0051730:intron | 20.0% |
| !!! | CTTTGAAATAAAACTATTGT+TGG | - | chr1_2:5846537-5846556 | None:intergenic | 20.0% |
| !!! | ATTTCAAACAATTTTAGTCT+AGG | - | chr1_2:5846566-5846585 | None:intergenic | 20.0% |
| !! | TTCAAAAATAAAAGACAAAG+TGG | - | chr1_2:5846975-5846994 | None:intergenic | 20.0% |
| !!! | GGTAAAACTTTTTACATTAA+CGG | + | chr1_2:5847212-5847231 | Msa0051730:intron | 20.0% |
| !!! | TTTGTTATTTTTTATGATCC+AGG | + | chr1_2:5847398-5847417 | Msa0051730:intron | 20.0% |
| !! | TGAGTAAAAACATCAATTAA+GGG | - | chr1_2:5847621-5847640 | None:intergenic | 20.0% |
| !! | TTGAGTAAAAACATCAATTA+AGG | - | chr1_2:5847622-5847641 | None:intergenic | 20.0% |
| !! | TGATGTACAAGATATATTAA+TGG | - | chr1_2:5847797-5847816 | None:intergenic | 20.0% |
| !! | TTAATAAATTCTCACCAATT+TGG | - | chr1_2:5847941-5847960 | None:intergenic | 20.0% |
| !! | TGAGAATTTATTAAAGAAAC+CGG | + | chr1_2:5847947-5847966 | Msa0051730:CDS | 20.0% |
| !! | TTAAGATTAATTAGTAGAGA+TGG | + | chr1_2:5848050-5848069 | Msa0051730:intron | 20.0% |
| !! | TTGTTGCACAATTATAATTT+GGG | - | chr1_2:5848092-5848111 | None:intergenic | 20.0% |
| !! | ATTGTTGCACAATTATAATT+TGG | - | chr1_2:5848093-5848112 | None:intergenic | 20.0% |
| !! | TATTCTATTCTAATACATTC+AGG | + | chr1_2:5848136-5848155 | Msa0051730:intron | 20.0% |
| ! | GAGTATGGTTTATATATTTC+AGG | - | chr1_2:5844077-5844096 | None:intergenic | 25.0% |
| ! | ATTACATAAAATTTCGATGG+AGG | + | chr1_2:5844156-5844175 | Msa0051730:exon | 25.0% |
| ! | TTACATAAAATTTCGATGGA+GGG | + | chr1_2:5844157-5844176 | Msa0051730:exon | 25.0% |
| !!! | TAACCATTCTTAGTATTGAT+GGG | + | chr1_2:5844233-5844252 | Msa0051730:CDS | 25.0% |
| !!! | TGAAAGTACCTTGTATATAT+TGG | + | chr1_2:5844330-5844349 | Msa0051730:intron | 25.0% |
| !!! | AAAAAAGTGTCCTTTTTTAG+GGG | + | chr1_2:5844720-5844739 | Msa0051730:intron | 25.0% |
| ! | ACAAAAAATTCCCCTAAAAA+AGG | - | chr1_2:5844733-5844752 | None:intergenic | 25.0% |
| !! | TATGTTGTGGGAAAATTTTA+GGG | - | chr1_2:5845265-5845284 | None:intergenic | 25.0% |
| !!! | TGAGGAATTCAAGTTTTTTA+TGG | + | chr1_2:5845363-5845382 | Msa0051730:intron | 25.0% |
| !!! | ATTGGTTCAATTTTTTGTAG+AGG | + | chr1_2:5845411-5845430 | Msa0051730:intron | 25.0% |
| !! | AGGTATTTTCCATCATATTT+GGG | - | chr1_2:5845483-5845502 | None:intergenic | 25.0% |
| !!! | AAGGTATTTTCCATCATATT+TGG | - | chr1_2:5845484-5845503 | None:intergenic | 25.0% |
| ! | TGATAAGATGAGAAAATGAT+TGG | - | chr1_2:5845600-5845619 | None:intergenic | 25.0% |
| !! | AATCATTTTCTCATCTTATC+AGG | + | chr1_2:5845599-5845618 | Msa0051730:CDS | 25.0% |
| ! | TAGTTTAGTTAAGAATCGTT+TGG | + | chr1_2:5845798-5845817 | Msa0051730:intron | 25.0% |
| ! | AGTTTAGTTAAGAATCGTTT+GGG | + | chr1_2:5845799-5845818 | Msa0051730:intron | 25.0% |
| !!! | GTTTTGAGACCAAATAAATT+AGG | + | chr1_2:5845891-5845910 | Msa0051730:intron | 25.0% |
| ! | ACCAAATAAATTAGGCTTAA+TGG | + | chr1_2:5845899-5845918 | Msa0051730:intron | 25.0% |
| ! | ACCATTAAGCCTAATTTATT+TGG | - | chr1_2:5845903-5845922 | None:intergenic | 25.0% |
| ! | TAAATGATTAACAATTGCAG+GGG | - | chr1_2:5846398-5846417 | None:intergenic | 25.0% |
| ! | AACAAAAAAAAATAAGCCAG+GGG | - | chr1_2:5846094-5846113 | None:intergenic | 25.0% |
| ! | TAAATGATTAACAATTGCAG+GGG | + | chr1_2:5846398-5846417 | Msa0051730:intron | 25.0% |
| ! | AATTGATTATTTGCACATAC+CGG | - | chr1_2:5846759-5846778 | None:intergenic | 25.0% |
| ! | TCCAAATTTGTATTATGCAA+TGG | + | chr1_2:5846927-5846946 | Msa0051730:intron | 25.0% |
| ! | CATACATGCATAATGTAATT+GGG | - | chr1_2:5847025-5847044 | None:intergenic | 25.0% |
| !!! | CATGTATGCACTTTTTATTT+TGG | + | chr1_2:5847037-5847056 | Msa0051730:intron | 25.0% |
| ! | TGAAGAAAGAAACTCAAATA+AGG | + | chr1_2:5847309-5847328 | Msa0051730:intron | 25.0% |
| ! | TAACAAATTCAACAAAATGC+AGG | + | chr1_2:5847848-5847867 | Msa0051730:intron | 25.0% |
| TAATGGTGTGATGAAAACAA+AGG | - | chr1_2:5844107-5844126 | None:intergenic | 30.0% | |
| ! | GTAACCATTCTTAGTATTGA+TGG | + | chr1_2:5844232-5844251 | Msa0051730:CDS | 30.0% |
| !! | AACCATTCTTAGTATTGATG+GGG | + | chr1_2:5844234-5844253 | Msa0051730:CDS | 30.0% |
| ! | TACCTTGTATATATTGGCTA+TGG | + | chr1_2:5844336-5844355 | Msa0051730:intron | 30.0% |
| !! | GTAAGTTGGTTCCATAATAA+TGG | + | chr1_2:5844606-5844625 | Msa0051730:intron | 30.0% |
| TCAGACACTTAACACTTAAT+AGG | + | chr1_2:5844879-5844898 | Msa0051730:intron | 30.0% | |
| CAGACACTTAACACTTAATA+GGG | + | chr1_2:5844880-5844899 | Msa0051730:intron | 30.0% | |
| !! | TATGTTTATTTTTCGTGGCT+AGG | - | chr1_2:5844923-5844942 | None:intergenic | 30.0% |
| !!! | AGTGGACGATTATTTTTATC+TGG | - | chr1_2:5845200-5845219 | None:intergenic | 30.0% |
| !!! | AAATTTTAGGGCAATGTTCA+AGG | - | chr1_2:5845253-5845272 | None:intergenic | 30.0% |
| ! | CTATGTTGTGGGAAAATTTT+AGG | - | chr1_2:5845266-5845285 | None:intergenic | 30.0% |
| ! | CTAAAATTTTCCCACAACAT+AGG | + | chr1_2:5845264-5845283 | Msa0051730:CDS | 30.0% |
| ! | ATTTGAGGTGTATATACTTG+AGG | + | chr1_2:5845345-5845364 | Msa0051730:intron | 30.0% |
| !!! | TCAATTTTTTGTAGAGGACT+TGG | + | chr1_2:5845417-5845436 | Msa0051730:intron | 30.0% |
| AAAGTCTTGATGTCAAATGT+GGG | - | chr1_2:5845573-5845592 | None:intergenic | 30.0% | |
| AGCTGAAACAATTATTGATC+AGG | + | chr1_2:5845842-5845861 | Msa0051730:intron | 30.0% | |
| !! | ACTGTGGTTTTTCTAAAGAT+AGG | - | chr1_2:5845873-5845892 | None:intergenic | 30.0% |
| TTTATTTGGTCTCAAAACTG+TGG | - | chr1_2:5845889-5845908 | None:intergenic | 30.0% | |
| CAGATTAGAAAAAATGGCAT+GGG | + | chr1_2:5846054-5846073 | Msa0051730:intron | 30.0% | |
| AGGAAAAAAAAAATTAGCCC+AGG | + | chr1_2:5846296-5846315 | Msa0051730:intron | 30.0% | |
| GGAAAAAAAAAATTAGCCCA+GGG | + | chr1_2:5846297-5846316 | Msa0051730:intron | 30.0% | |
| GAAAAAAAAAATTAGCCCAG+GGG | + | chr1_2:5846298-5846317 | Msa0051730:intron | 30.0% | |
| AAAGTTTAGCATCCAAACAA+GGG | - | chr1_2:5846608-5846627 | None:intergenic | 30.0% | |
| CAACTTCACAAATAAAGATC+AGG | + | chr1_2:5846677-5846696 | Msa0051730:CDS | 30.0% | |
| GCCATTGCATAATACAAATT+TGG | - | chr1_2:5846931-5846950 | None:intergenic | 30.0% | |
| GTATTATGCAATGGCATATA+TGG | + | chr1_2:5846936-5846955 | Msa0051730:intron | 30.0% | |
| ! | AGACAAAGTGGATTTAATCA+TGG | - | chr1_2:5846963-5846982 | None:intergenic | 30.0% |
| GCATACATGCATAATGTAAT+TGG | - | chr1_2:5847026-5847045 | None:intergenic | 30.0% | |
| ! | CGTTTTCTGATCATTTCAAT+AGG | + | chr1_2:5847504-5847523 | Msa0051730:CDS | 30.0% |
| !! | GATGTTTTTACTCAATCAAG+TGG | + | chr1_2:5847627-5847646 | Msa0051730:CDS | 30.0% |
| TGATAATTACCTTCGAATTC+AGG | + | chr1_2:5847701-5847720 | Msa0051730:CDS | 30.0% | |
| TTGAAGAAACTATGCCAAAT+TGG | + | chr1_2:5847924-5847943 | Msa0051730:CDS | 30.0% | |
| TCCAGAGTCAATTTAGAAAA+TGG | + | chr1_2:5847972-5847991 | Msa0051730:CDS | 30.0% | |
| !! | ACCATTTTCTAAATTGACTC+TGG | - | chr1_2:5847976-5847995 | None:intergenic | 30.0% |
| TTGCACAATTATAATTTGGG+TGG | - | chr1_2:5848089-5848108 | None:intergenic | 30.0% | |
| CAAAAATACTTTCACAAGAG+AGG | + | chr1_2:5848163-5848182 | Msa0051730:CDS | 30.0% | |
| AACAAAGGCTGTATAGAGTA+TGG | - | chr1_2:5844092-5844111 | None:intergenic | 35.0% | |
| TTACCAAGTTCCCATAAGTA+GGG | - | chr1_2:5844216-5844235 | None:intergenic | 35.0% | |
| !! | ACCATTCTTAGTATTGATGG+GGG | + | chr1_2:5844235-5844254 | Msa0051730:CDS | 35.0% |
| GGAATTCAATAATTGCAGCA+GGG | - | chr1_2:5844279-5844298 | None:intergenic | 35.0% | |
| AGGAATTCAATAATTGCAGC+AGG | - | chr1_2:5844280-5844299 | None:intergenic | 35.0% | |
| AGCCATAGCCAATATATACA+AGG | - | chr1_2:5844341-5844360 | None:intergenic | 35.0% | |
| GTTCCATAATAATGGCAGTA+GGG | + | chr1_2:5844614-5844633 | Msa0051730:intron | 35.0% | |
| TTATGCAAACTATCTTGGTG+AGG | + | chr1_2:5844657-5844676 | Msa0051730:intron | 35.0% | |
| ! | TAGTGCAGCTACTTTATGAA+AGG | + | chr1_2:5844681-5844700 | Msa0051730:intron | 35.0% |
| TGGCTAGGTTTATTAGTAGT+TGG | - | chr1_2:5844908-5844927 | None:intergenic | 35.0% | |
| !! | AATTAAGTTGATCTGTGTGC+AGG | + | chr1_2:5845082-5845101 | Msa0051730:intron | 35.0% |
| GATTACTTTGATGTGATCTC+AGG | + | chr1_2:5845134-5845153 | Msa0051730:CDS | 35.0% | |
| ATATCTTTGGCAGCAAAAAG+TGG | - | chr1_2:5845218-5845237 | None:intergenic | 35.0% | |
| GTAAAAGGGCTTGATATCTT+TGG | - | chr1_2:5845231-5845250 | None:intergenic | 35.0% | |
| TCTCTCTAACAACTTGATGA+AGG | - | chr1_2:5845503-5845522 | None:intergenic | 35.0% | |
| CAAGTTGTTAGAGAGAAACT+TGG | + | chr1_2:5845507-5845526 | Msa0051730:CDS | 35.0% | |
| AAATGTGGGAACAACAATGT+TGG | - | chr1_2:5845559-5845578 | None:intergenic | 35.0% | |
| CAAAGTCTTGATGTCAAATG+TGG | - | chr1_2:5845574-5845593 | None:intergenic | 35.0% | |
| TTATGGAATGTTGCCAATTG+TGG | + | chr1_2:5845670-5845689 | Msa0051730:intron | 35.0% | |
| GTCAAGTTATTGAACTCAAG+TGG | + | chr1_2:5845768-5845787 | Msa0051730:intron | 35.0% | |
| AATAGGCGGCGTTTAAAAAT+TGG | + | chr1_2:5845939-5845958 | Msa0051730:intron | 35.0% | |
| !!! | TTTTTTCTAATCTGGTGACG+TGG | - | chr1_2:5846048-5846067 | None:intergenic | 35.0% |
| CGTCACCAGATTAGAAAAAA+TGG | + | chr1_2:5846048-5846067 | Msa0051730:intron | 35.0% | |
| !!! | CCATGCCATTTTTTCTAATC+TGG | - | chr1_2:5846056-5846075 | None:intergenic | 35.0% |
| CCAGATTAGAAAAAATGGCA+TGG | + | chr1_2:5846053-5846072 | Msa0051730:intron | 35.0% | |
| AATAGGCGGCGTTTAAAAAT+TGG | - | chr1_2:5845939-5845958 | None:intergenic | 35.0% | |
| AAGTTTAGCATCCAAACAAG+GGG | - | chr1_2:5846607-5846626 | None:intergenic | 35.0% | |
| GAAAGTTTAGCATCCAAACA+AGG | - | chr1_2:5846609-5846628 | None:intergenic | 35.0% | |
| TATTTGTGAAGTTGTGAGCA+GGG | - | chr1_2:5846671-5846690 | None:intergenic | 35.0% | |
| TTATTTGTGAAGTTGTGAGC+AGG | - | chr1_2:5846672-5846691 | None:intergenic | 35.0% | |
| ACAAATAAAGATCAGGAAGC+TGG | + | chr1_2:5846684-5846703 | Msa0051730:CDS | 35.0% | |
| TGATCATTTCAATAGGCACT+GGG | + | chr1_2:5847511-5847530 | Msa0051730:CDS | 35.0% | |
| CCAATCTAATAATCCCCATT+TGG | - | chr1_2:5847577-5847596 | None:intergenic | 35.0% | |
| CCAAATGGGGATTATTAGAT+TGG | + | chr1_2:5847574-5847593 | Msa0051730:CDS | 35.0% | |
| ! | TTAGATTGGCTAACACATAG+TGG | + | chr1_2:5847588-5847607 | Msa0051730:CDS | 35.0% |
| TACTCAATCAAGTGGTGATA+TGG | + | chr1_2:5847635-5847654 | Msa0051730:CDS | 35.0% | |
| ! | GGAATTTTACCTGAATTCGA+AGG | - | chr1_2:5847713-5847732 | None:intergenic | 35.0% |
| TTCTTCAGTAGACATTGCTA+CGG | + | chr1_2:5847893-5847912 | Msa0051730:CDS | 35.0% | |
| TGAATCATGAAACTAGATGC+CGG | - | chr1_2:5848236-5848255 | None:intergenic | 35.0% | |
| AAATTCAGCCCCCTACTTAT+GGG | + | chr1_2:5844203-5844222 | Msa0051730:CDS | 40.0% | |
| TACCAAGTTCCCATAAGTAG+GGG | - | chr1_2:5844215-5844234 | None:intergenic | 40.0% | |
| GTTACCAAGTTCCCATAAGT+AGG | - | chr1_2:5844217-5844236 | None:intergenic | 40.0% | |
| TCCCCCATCAATACTAAGAA+TGG | - | chr1_2:5844239-5844258 | None:intergenic | 40.0% | |
| !! | ATTCTTAGTATTGATGGGGG+AGG | + | chr1_2:5844238-5844257 | Msa0051730:CDS | 40.0% |
| !! | TATTGATGGGGGAGGTATTA+GGG | + | chr1_2:5844246-5844265 | Msa0051730:CDS | 40.0% |
| ATTCCTTGAATCTCACCTTC+AGG | + | chr1_2:5844294-5844313 | Msa0051730:CDS | 40.0% | |
| ATACCTGAAGGTGAGATTCA+AGG | - | chr1_2:5844300-5844319 | None:intergenic | 40.0% | |
| GGTTCCATAATAATGGCAGT+AGG | + | chr1_2:5844613-5844632 | Msa0051730:intron | 40.0% | |
| CATCCCTACTGCCATTATTA+TGG | - | chr1_2:5844620-5844639 | None:intergenic | 40.0% | |
| ! | TTTATCTGGAGCAGCTAACA+TGG | - | chr1_2:5845186-5845205 | None:intergenic | 40.0% |
| GGGCAATGTTCAAGGTAAAA+GGG | - | chr1_2:5845245-5845264 | None:intergenic | 40.0% | |
| AGGGCAATGTTCAAGGTAAA+AGG | - | chr1_2:5845246-5845265 | None:intergenic | 40.0% | |
| GCAAAGGTAATGAGATCTCT+TGG | + | chr1_2:5845453-5845472 | Msa0051730:CDS | 40.0% | |
| AAGGTAATGAGATCTCTTGG+AGG | + | chr1_2:5845456-5845475 | Msa0051730:CDS | 40.0% | |
| ! | TGTCAGGATTAGCGATTACA+GGG | - | chr1_2:5845966-5845985 | None:intergenic | 40.0% |
| ! | ATGTCAGGATTAGCGATTAC+AGG | - | chr1_2:5845967-5845986 | None:intergenic | 40.0% |
| AATTGCAGGGGTAAAATGTC+AGG | - | chr1_2:5845982-5846001 | None:intergenic | 40.0% | |
| !! | GCAGTGATTAAGTTGGTCAA+AGG | - | chr1_2:5846366-5846385 | None:intergenic | 40.0% |
| GGAAATGACAAAATTACCCC+TGG | + | chr1_2:5846075-5846094 | Msa0051730:intron | 40.0% | |
| !!! | AAATTAGCCCAGGGGTATTT+TGG | + | chr1_2:5846306-5846325 | Msa0051730:intron | 40.0% |
| GAATTGACCAAAATACCCCT+GGG | - | chr1_2:5846316-5846335 | None:intergenic | 40.0% | |
| CAGATTGGCAAAAATGGCAT+GGG | - | chr1_2:5846338-5846357 | None:intergenic | 40.0% | |
| !! | GCAGTGATTAAGTTGGTCAA+AGG | + | chr1_2:5846366-5846385 | Msa0051730:intron | 40.0% |
| TGTCTTTAGTCCCTGCAAAT+AGG | - | chr1_2:5846470-5846489 | None:intergenic | 40.0% | |
| GAGGAGTTCAATCTCATTGA+TGG | + | chr1_2:5846714-5846733 | Msa0051730:CDS | 40.0% | |
| GAGTTCAATCTCATTGATGG+TGG | + | chr1_2:5846717-5846736 | Msa0051730:CDS | 40.0% | |
| TGGTGTTTGCGCAAATAATC+CGG | + | chr1_2:5846737-5846756 | Msa0051730:CDS | 40.0% | |
| ! | AAGATTGTTGTGCGCTGATA+TGG | + | chr1_2:5847191-5847210 | Msa0051730:intron | 40.0% |
| CATTCATTGCAACTAAAGCC+TGG | - | chr1_2:5847419-5847438 | None:intergenic | 40.0% | |
| GGCTTGATTGGAAAGAAATC+AGG | - | chr1_2:5847471-5847490 | None:intergenic | 40.0% | |
| TTTCTTTCCAATCAAGCCTC+TGG | + | chr1_2:5847473-5847492 | Msa0051730:CDS | 40.0% | |
| AGAAAACGACCATATTCCAG+AGG | - | chr1_2:5847492-5847511 | None:intergenic | 40.0% | |
| CTGATCATTTCAATAGGCAC+TGG | + | chr1_2:5847510-5847529 | Msa0051730:CDS | 40.0% | |
| ATGGTAGTAGGAGTCGAATT+CGG | + | chr1_2:5847755-5847774 | Msa0051730:intron | 40.0% | |
| TATTAATGGCGTAACCTCTG+AGG | - | chr1_2:5847783-5847802 | None:intergenic | 40.0% | |
| TAGATATAGCGCAAGCTAAG+TGG | - | chr1_2:5847821-5847840 | None:intergenic | 40.0% | |
| ATGCAGGATGATACATTGAC+AGG | + | chr1_2:5847864-5847883 | Msa0051730:intron | 40.0% | |
| ! | TCTAAATTGACTCTGGAGAC+CGG | - | chr1_2:5847969-5847988 | None:intergenic | 40.0% |
| ! | CATTTTGAGCCACTAACAAC+CGG | + | chr1_2:5847996-5848015 | Msa0051730:CDS | 40.0% |
| !! | AGCATCTTCATTGGTTTCTC+CGG | - | chr1_2:5848018-5848037 | None:intergenic | 40.0% |
| GAATCATGAAACTAGATGCC+GGG | - | chr1_2:5848235-5848254 | None:intergenic | 40.0% | |
| CAAATTCAGCCCCCTACTTA+TGG | + | chr1_2:5844202-5844221 | Msa0051730:CDS | 45.0% | |
| ACCAAGTTCCCATAAGTAGG+GGG | - | chr1_2:5844214-5844233 | None:intergenic | 45.0% | |
| !! | GTATTGATGGGGGAGGTATT+AGG | + | chr1_2:5844245-5844264 | Msa0051730:CDS | 45.0% |
| !! | ATTGATGGGGGAGGTATTAG+GGG | + | chr1_2:5844247-5844266 | Msa0051730:CDS | 45.0% |
| CAATAATTGCAGCAGGGATG+AGG | - | chr1_2:5844273-5844292 | None:intergenic | 45.0% | |
| AGTTGGATGGTGAAGATGCA+AGG | + | chr1_2:5845105-5845124 | Msa0051730:CDS | 45.0% | |
| GTGATCTCAGGAACAAGTAC+AGG | + | chr1_2:5845146-5845165 | Msa0051730:CDS | 45.0% | |
| ATCTCAGGAACAAGTACAGG+AGG | + | chr1_2:5845149-5845168 | Msa0051730:CDS | 45.0% | |
| TGGTGCGACACTATTAGCAA+AGG | + | chr1_2:5845437-5845456 | Msa0051730:CDS | 45.0% | |
| CTTGGAGGACCCAAATATGA+TGG | + | chr1_2:5845471-5845490 | Msa0051730:CDS | 45.0% | |
| TTAAACGCCGCCTATTTGCA+GGG | - | chr1_2:5846457-5846476 | None:intergenic | 45.0% | |
| TTTAAACGCCGCCTATTTGC+AGG | - | chr1_2:5846456-5846475 | None:intergenic | 45.0% | |
| TGACGTGGCAGTGATTAAGT+TGG | - | chr1_2:5846359-5846378 | None:intergenic | 45.0% | |
| GGAATTGACCAAAATACCCC+TGG | - | chr1_2:5846317-5846336 | None:intergenic | 45.0% | |
| CCAGATTGGCAAAAATGGCA+TGG | - | chr1_2:5846339-5846358 | None:intergenic | 45.0% | |
| !!! | CCATGCCATTTTTGCCAATC+TGG | + | chr1_2:5846336-5846355 | Msa0051730:intron | 45.0% |
| CGTCACCAGATTGGCAAAAA+TGG | - | chr1_2:5846344-5846363 | None:intergenic | 45.0% | |
| !! | TTTTTGCCAATCTGGTGACG+TGG | + | chr1_2:5846344-5846363 | Msa0051730:intron | 45.0% |
| TGACGTGGCAGTGATTAAGT+TGG | + | chr1_2:5846359-5846378 | Msa0051730:intron | 45.0% | |
| AATTGCAGGGGTAAAATGCC+AGG | + | chr1_2:5846410-5846429 | Msa0051730:intron | 45.0% | |
| ! | ATGCCAGGATTAGCGATTAC+AGG | + | chr1_2:5846425-5846444 | Msa0051730:intron | 45.0% |
| ! | TGCCAGGATTAGCGATTACA+GGG | + | chr1_2:5846426-5846445 | Msa0051730:intron | 45.0% |
| TTTAAACGCCGCCTATTTGC+AGG | + | chr1_2:5846456-5846475 | Msa0051730:intron | 45.0% | |
| TTAAACGCCGCCTATTTGCA+GGG | + | chr1_2:5846457-5846476 | Msa0051730:intron | 45.0% | |
| CTTTAGTCCCTGCAAATAGG+CGG | - | chr1_2:5846467-5846486 | None:intergenic | 45.0% | |
| TTGTGAGCAGGGAGATAAGT+AGG | - | chr1_2:5846660-5846679 | None:intergenic | 45.0% | |
| TCAGGAAGCTGGAAAAGAAG+AGG | + | chr1_2:5846695-5846714 | Msa0051730:CDS | 45.0% | |
| CCATATTCCAGAGGCTTGAT+TGG | - | chr1_2:5847483-5847502 | None:intergenic | 45.0% | |
| !! | CCAATCAAGCCTCTGGAATA+TGG | + | chr1_2:5847480-5847499 | Msa0051730:CDS | 45.0% |
| CACTGGGACTGCAAAAAATG+AGG | + | chr1_2:5847527-5847546 | Msa0051730:CDS | 45.0% | |
| GGACTGCAAAAAATGAGGAG+AGG | + | chr1_2:5847532-5847551 | Msa0051730:CDS | 45.0% | |
| TGCACAAATGGCAGCCAAAT+GGG | + | chr1_2:5847560-5847579 | Msa0051730:CDS | 45.0% | |
| TTCAGTAGACATTGCTACGG+AGG | + | chr1_2:5847896-5847915 | Msa0051730:CDS | 45.0% | |
| TTGGTTTCTCCGGTTGTTAG+TGG | - | chr1_2:5848008-5848027 | None:intergenic | 45.0% | |
| !! | CCTCTTGAGAGCATCTTCAT+TGG | - | chr1_2:5848027-5848046 | None:intergenic | 45.0% |
| CCAATGAAGATGCTCTCAAG+AGG | + | chr1_2:5848024-5848043 | Msa0051730:CDS | 45.0% | |
| TCTTGCCTCTACTTGTGTGT+GGG | - | chr1_2:5848209-5848228 | None:intergenic | 45.0% | |
| TTCTTGCCTCTACTTGTGTG+TGG | - | chr1_2:5848210-5848229 | None:intergenic | 45.0% | |
| GTTGATCTGTGTGCAGGAGT+TGG | + | chr1_2:5845088-5845107 | Msa0051730:intron | 50.0% | |
| ATCTGTGTGCAGGAGTTGGA+TGG | + | chr1_2:5845092-5845111 | Msa0051730:intron | 50.0% | |
| TGTGTTTCGCCCCTGCAAAT+AGG | + | chr1_2:5845922-5845941 | Msa0051730:intron | 50.0% | |
| TAAACGCCGCCTATTTGCAG+GGG | - | chr1_2:5846458-5846477 | None:intergenic | 50.0% | |
| GTCCCTGTAATCGCTAATCC+TGG | - | chr1_2:5845961-5845980 | None:intergenic | 50.0% | |
| GCTTCAGAGATCCCCTTGTT+TGG | + | chr1_2:5846593-5846612 | Msa0051730:intron | 50.0% | |
| GGAGAGGTTCACTGCACAAA+TGG | + | chr1_2:5847548-5847567 | Msa0051730:CDS | 50.0% | |
| CTGCACAAATGGCAGCCAAA+TGG | + | chr1_2:5847559-5847578 | Msa0051730:CDS | 50.0% | |
| GCACAAATGGCAGCCAAATG+GGG | + | chr1_2:5847561-5847580 | Msa0051730:CDS | 50.0% | |
| AGTCGAATTCGGTACCTCAG+AGG | + | chr1_2:5847766-5847785 | Msa0051730:intron | 50.0% | |
| AGATCCCCACACACAAGTAG+AGG | + | chr1_2:5848201-5848220 | Msa0051730:CDS | 50.0% | |
| CTTGCCTCTACTTGTGTGTG+GGG | - | chr1_2:5848208-5848227 | None:intergenic | 50.0% | |
| CAAGTAGAGGCAAGAAAGCC+CGG | + | chr1_2:5848214-5848233 | Msa0051730:CDS | 50.0% | |
| GCCCCCTACTTATGGGAACT+TGG | + | chr1_2:5844210-5844229 | Msa0051730:CDS | 55.0% | |
| GTTTCGCCCCTGCAAATAGG+CGG | + | chr1_2:5845925-5845944 | Msa0051730:intron | 55.0% | |
| TCACTGCCACGTCACCAGAT+TGG | - | chr1_2:5846039-5846058 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 5844037 | 5848385 | 5844037 | ID=Msa0051730;Name=Msa0051730 |
| chr1_2 | mRNA | 5844037 | 5848385 | 5844037 | ID=Msa0051730-mRNA-1;Parent=Msa0051730;Name=Msa0051730-mRNA-1;_AED=0.03;_eAED=0.03;_QI=135|1|0.85|1|1|1|7|134|417 |
| chr1_2 | exon | 5844037 | 5844315 | 5844037 | ID=Msa0051730-mRNA-1:exon:1819;Parent=Msa0051730-mRNA-1 |
| chr1_2 | exon | 5845104 | 5845285 | 5845104 | ID=Msa0051730-mRNA-1:exon:1820;Parent=Msa0051730-mRNA-1 |
| chr1_2 | exon | 5845431 | 5845620 | 5845431 | ID=Msa0051730-mRNA-1:exon:1821;Parent=Msa0051730-mRNA-1 |
| chr1_2 | exon | 5846594 | 5846758 | 5846594 | ID=Msa0051730-mRNA-1:exon:1822;Parent=Msa0051730-mRNA-1 |
| chr1_2 | exon | 5847420 | 5847722 | 5847420 | ID=Msa0051730-mRNA-1:exon:1823;Parent=Msa0051730-mRNA-1 |
| chr1_2 | exon | 5847870 | 5848045 | 5847870 | ID=Msa0051730-mRNA-1:exon:1824;Parent=Msa0051730-mRNA-1 |
| chr1_2 | exon | 5848158 | 5848385 | 5848158 | ID=Msa0051730-mRNA-1:exon:1825;Parent=Msa0051730-mRNA-1 |
| chr1_2 | five_prime_UTR | 5844037 | 5844171 | 5844037 | ID=Msa0051730-mRNA-1:five_prime_utr;Parent=Msa0051730-mRNA-1 |
| chr1_2 | CDS | 5844172 | 5844315 | 5844172 | ID=Msa0051730-mRNA-1:cds;Parent=Msa0051730-mRNA-1 |
| chr1_2 | CDS | 5845104 | 5845285 | 5845104 | ID=Msa0051730-mRNA-1:cds;Parent=Msa0051730-mRNA-1 |
| chr1_2 | CDS | 5845431 | 5845620 | 5845431 | ID=Msa0051730-mRNA-1:cds;Parent=Msa0051730-mRNA-1 |
| chr1_2 | CDS | 5846594 | 5846758 | 5846594 | ID=Msa0051730-mRNA-1:cds;Parent=Msa0051730-mRNA-1 |
| chr1_2 | CDS | 5847420 | 5847722 | 5847420 | ID=Msa0051730-mRNA-1:cds;Parent=Msa0051730-mRNA-1 |
| chr1_2 | CDS | 5847870 | 5848045 | 5847870 | ID=Msa0051730-mRNA-1:cds;Parent=Msa0051730-mRNA-1 |
| chr1_2 | CDS | 5848158 | 5848251 | 5848158 | ID=Msa0051730-mRNA-1:cds;Parent=Msa0051730-mRNA-1 |
| chr1_2 | three_prime_UTR | 5848252 | 5848385 | 5848252 | ID=Msa0051730-mRNA-1:three_prime_utr;Parent=Msa0051730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
