Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585060 | XP_003589236.1 | 90.168 | 417 | 6 | 1 | 1 | 382 | 1 | 417 | 0.0 | 763 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585060 | sp|O48723|PLP2_ARATH | 59.747 | 395 | 119 | 5 | 12 | 370 | 10 | 400 | 4.15e-160 | 458 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026420 | Msa0585060 | 0.872427 | 3.206984e-67 | -8.615850e-47 |
| Msa0051620 | Msa0585060 | 0.860096 | 2.621155e-63 | -8.615850e-47 |
| Msa0051730 | Msa0585060 | 0.877708 | 5.058482e-69 | -8.615850e-47 |
| Msa0143640 | Msa0585060 | 0.828776 | 7.449622e-55 | -8.615850e-47 |
| Msa0146090 | Msa0585060 | 0.862661 | 4.325959e-64 | -8.615850e-47 |
| Msa0191470 | Msa0585060 | 0.805071 | 1.593504e-49 | -8.615850e-47 |
| Msa0393100 | Msa0585060 | 0.824764 | 6.764954e-54 | -8.615850e-47 |
| Msa0402800 | Msa0585060 | 0.806260 | 8.968387e-50 | -8.615850e-47 |
| Msa0421080 | Msa0585060 | 0.837172 | 6.081868e-57 | -8.615850e-47 |
| Msa0480530 | Msa0585060 | 0.808102 | 3.652484e-50 | -8.615850e-47 |
| Msa0480540 | Msa0585060 | 0.819937 | 8.935054e-53 | -8.615850e-47 |
| Msa0480550 | Msa0585060 | 0.825922 | 3.598865e-54 | -8.615850e-47 |
| Msa0254640 | Msa0585060 | 0.801946 | 7.083592e-49 | -8.615850e-47 |
| Msa0319680 | Msa0585060 | 0.809891 | 1.511851e-50 | -8.615850e-47 |
| Msa0353010 | Msa0585060 | 0.800606 | 1.332186e-48 | -8.615850e-47 |
| Msa0488580 | Msa0585060 | 0.800530 | 1.380360e-48 | -8.615850e-47 |
| Msa0497860 | Msa0585060 | 0.801352 | 9.376068e-49 | -8.615850e-47 |
| Msa0500770 | Msa0585060 | 0.828517 | 8.606139e-55 | -8.615850e-47 |
| Msa0580840 | Msa0585060 | 0.832892 | 7.293127e-56 | -8.615850e-47 |
| Msa0585060 | Msa0645480 | 0.823782 | 1.150721e-53 | -8.615850e-47 |
| Msa0585060 | Msa0716620 | 0.818191 | 2.229201e-52 | -8.615850e-47 |
| Msa0585060 | Msa0744540 | 0.817703 | 2.874070e-52 | -8.615850e-47 |
| Msa0585060 | Msa0744550 | 0.818755 | 1.661172e-52 | -8.615850e-47 |
| Msa0585060 | Msa0744560 | 0.826569 | 2.524022e-54 | -8.615850e-47 |
| Msa0585060 | Msa0746340 | 0.845925 | 2.995003e-59 | -8.615850e-47 |
| Msa0585060 | Msa0795320 | 0.815482 | 9.037487e-52 | -8.615850e-47 |
| Msa0585060 | Msa0806910 | 0.800346 | 1.504713e-48 | -8.615850e-47 |
| Msa0585060 | Msa0826370 | 0.819907 | 9.073584e-53 | -8.615850e-47 |
| Msa0585060 | Msa0826380 | 0.808003 | 3.833420e-50 | -8.615850e-47 |
| Msa0585060 | Msa0826450 | 0.819821 | 9.494160e-53 | -8.615850e-47 |
| Msa0585060 | Msa0865810 | 0.809478 | 1.855424e-50 | -8.615850e-47 |
| Msa0585060 | Msa1030210 | 0.815167 | 1.062141e-51 | -8.615850e-47 |
| Msa0585060 | Msa1061840 | 0.804845 | 1.776367e-49 | -8.615850e-47 |
| Msa0585060 | Msa1069250 | 0.823062 | 1.695862e-53 | -8.615850e-47 |
| Msa0585060 | Msa1174280 | 0.814208 | 1.731994e-51 | -8.615850e-47 |
| Msa0585060 | Msa1202110 | 0.820516 | 6.581806e-53 | -8.615850e-47 |
| Msa0585060 | Msa1211610 | 0.835419 | 1.697043e-56 | -8.615850e-47 |
| Msa0585060 | Msa1223560 | 0.810086 | 1.372558e-50 | -8.615850e-47 |
| Msa0585060 | Msa1224510 | 0.841706 | 4.038737e-58 | -8.615850e-47 |
| Msa0585060 | Msa1254870 | 0.821298 | 4.348456e-53 | -8.615850e-47 |
| Msa0585060 | Msa1256600 | 0.802389 | 5.741092e-49 | -8.615850e-47 |
| Msa0585060 | Msa1299480 | 0.837212 | 5.939314e-57 | -8.615850e-47 |
| Msa0585060 | Msa1328430 | 0.820432 | 6.879947e-53 | -8.615850e-47 |
| Msa0585060 | Msa1333700 | 0.830963 | 2.184087e-55 | -8.615850e-47 |
| Msa0585060 | Msa1349830 | 0.822229 | 2.648181e-53 | -8.615850e-47 |
| Msa0585060 | Msa1377050 | 0.805462 | 1.319215e-49 | -8.615850e-47 |
| Msa0585060 | Msa1387610 | 0.804446 | 2.151448e-49 | -8.615850e-47 |
| Msa0585060 | Msa1398120 | 0.815951 | 7.104094e-52 | -8.615850e-47 |
| Msa0585060 | Msa1399930 | 0.816200 | 6.250361e-52 | -8.615850e-47 |
| Msa0585060 | Msa1422230 | 0.809652 | 1.702507e-50 | -8.615850e-47 |
| Msa0585060 | Msa1449470 | 0.814144 | 1.788760e-51 | -8.615850e-47 |
| Msa0585060 | Msa1459920 | 0.816702 | 4.825081e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585060 | MtrunA17_Chr1g0153781 | 90.168 | 417 | 6 | 1 | 1 | 382 | 1 | 417 | 0.0 | 763 |
| Msa0585060 | MtrunA17_Chr3g0133691 | 71.216 | 403 | 79 | 3 | 5 | 372 | 4 | 404 | 0.0 | 568 |
| Msa0585060 | MtrunA17_Chr3g0133681 | 69.231 | 403 | 87 | 3 | 5 | 372 | 4 | 404 | 0.0 | 554 |
| Msa0585060 | MtrunA17_Chr5g0402451 | 49.746 | 394 | 156 | 5 | 9 | 365 | 1 | 389 | 4.08e-136 | 394 |
| Msa0585060 | MtrunA17_Chr5g0402441 | 51.459 | 377 | 143 | 4 | 19 | 359 | 14 | 386 | 4.93e-136 | 394 |
| Msa0585060 | MtrunA17_Chr8g0335581 | 43.108 | 399 | 182 | 12 | 11 | 375 | 11 | 398 | 5.74e-92 | 282 |
| Msa0585060 | MtrunA17_Chr8g0335611 | 40.360 | 389 | 184 | 9 | 11 | 364 | 22 | 397 | 1.43e-83 | 261 |
| Msa0585060 | MtrunA17_Chr8g0335621 | 39.846 | 389 | 186 | 9 | 11 | 364 | 53 | 428 | 2.88e-82 | 258 |
| Msa0585060 | MtrunA17_Chr8g0335651 | 43.299 | 388 | 161 | 7 | 10 | 364 | 22 | 383 | 1.40e-81 | 255 |
| Msa0585060 | MtrunA17_Chr8g0335631 | 42.356 | 399 | 180 | 10 | 11 | 375 | 22 | 404 | 5.36e-81 | 254 |
| Msa0585060 | MtrunA17_Chr8g0335591 | 38.000 | 400 | 198 | 9 | 10 | 374 | 21 | 405 | 6.96e-76 | 241 |
| Msa0585060 | MtrunA17_Chr1g0199801 | 27.569 | 399 | 232 | 13 | 21 | 377 | 75 | 458 | 1.71e-31 | 124 |
| Msa0585060 | MtrunA17_Chr7g0259871 | 28.736 | 261 | 147 | 9 | 23 | 269 | 32 | 267 | 1.41e-25 | 106 |
| Msa0585060 | MtrunA17_Chr1g0185551 | 27.165 | 254 | 166 | 8 | 23 | 272 | 32 | 270 | 5.98e-25 | 104 |
| Msa0585060 | MtrunA17_Chr2g0292051 | 28.788 | 264 | 158 | 9 | 6 | 265 | 54 | 291 | 1.43e-18 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0585060 | AT2G26560.1 | 59.747 | 395 | 119 | 5 | 12 | 370 | 10 | 400 | 4.22e-161 | 458 |
| Msa0585060 | AT4G37070.2 | 54.731 | 391 | 140 | 3 | 13 | 368 | 11 | 399 | 7.95e-149 | 427 |
| Msa0585060 | AT4G37050.1 | 56.030 | 398 | 132 | 3 | 14 | 369 | 28 | 424 | 1.04e-148 | 427 |
| Msa0585060 | AT4G37060.1 | 52.658 | 395 | 150 | 3 | 14 | 373 | 12 | 404 | 1.72e-144 | 416 |
| Msa0585060 | AT4G37070.3 | 54.133 | 375 | 135 | 3 | 13 | 352 | 11 | 383 | 3.94e-140 | 404 |
| Msa0585060 | AT4G37070.1 | 54.133 | 375 | 135 | 3 | 13 | 352 | 11 | 383 | 3.94e-140 | 404 |
| Msa0585060 | AT4G37060.2 | 48.826 | 426 | 150 | 4 | 14 | 373 | 12 | 435 | 7.94e-138 | 400 |
| Msa0585060 | AT4G37070.4 | 52.533 | 375 | 130 | 4 | 13 | 352 | 11 | 372 | 4.57e-132 | 383 |
| Msa0585060 | AT5G43590.1 | 48.718 | 390 | 154 | 6 | 13 | 364 | 6 | 387 | 2.76e-111 | 331 |
| Msa0585060 | AT5G43590.2 | 48.462 | 390 | 155 | 5 | 13 | 364 | 73 | 454 | 2.03e-110 | 331 |
| Msa0585060 | AT3G54950.1 | 27.184 | 309 | 202 | 7 | 21 | 322 | 98 | 390 | 1.18e-32 | 128 |
| Msa0585060 | AT3G63200.1 | 30.924 | 249 | 147 | 7 | 23 | 265 | 32 | 261 | 3.50e-30 | 119 |
| Msa0585060 | AT4G29800.1 | 27.182 | 401 | 232 | 14 | 21 | 377 | 121 | 505 | 1.64e-29 | 119 |
| Msa0585060 | AT4G29800.2 | 27.114 | 402 | 232 | 14 | 21 | 377 | 121 | 506 | 2.96e-29 | 119 |
| Msa0585060 | AT2G39220.1 | 31.343 | 268 | 168 | 9 | 21 | 286 | 108 | 361 | 4.34e-29 | 118 |
Find 86 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTATGGTTTATATATTTC+AGG | 0.196146 | 4_2:-5575636 | None:intergenic |
| AGGGCAATGTTCAAGGTAAA+AGG | 0.209370 | 4_2:-5578376 | None:intergenic |
| TTAATAAATTCTCACCAATT+TGG | 0.220880 | 4_2:-5580474 | None:intergenic |
| TCCAGAGTCAATTTAGAAAA+TGG | 0.281008 | 4_2:+5580508 | Msa0585060:CDS |
| TTGAAGAAACTATGCCAAAT+TGG | 0.298509 | 4_2:+5580460 | Msa0585060:CDS |
| GTAAAAGGGCTTGATATCTT+TGG | 0.318803 | 4_2:-5578361 | None:intergenic |
| GCTTCAGAGATCCCCTTGTT+TGG | 0.326246 | 4_2:+5579127 | Msa0585060:intron |
| CCATATTCCAGAGGCTTGAT+TGG | 0.331569 | 4_2:-5580014 | None:intergenic |
| CCAATCAAGCCTCTGGAATA+TGG | 0.340675 | 4_2:+5580014 | Msa0585060:CDS |
| GTAACCATTCTTAGTATTGA+TGG | 0.353477 | 4_2:+5575794 | Msa0585060:CDS |
| ATTCCTTGAATCTCACCTTC+AGG | 0.368436 | 4_2:+5575856 | Msa0585060:CDS |
| CCAAATGGGGATTATTAGAT+TGG | 0.382105 | 4_2:+5580108 | Msa0585060:CDS |
| TGCACAAATGGCAGCCAAAT+GGG | 0.384292 | 4_2:+5580094 | Msa0585060:CDS |
| AACAAAGGCTGTATAGAGTA+TGG | 0.387465 | 4_2:-5575651 | None:intergenic |
| TTGGTTTCTCCGGTTGTTAG+TGG | 0.394804 | 4_2:-5580541 | None:intergenic |
| TTTCTTTCCAATCAAGCCTC+TGG | 0.407655 | 4_2:+5580007 | Msa0585060:CDS |
| CCAATCTAATAATCCCCATT+TGG | 0.412692 | 4_2:-5580108 | None:intergenic |
| TGAGAATTTATTAAAGAAAC+CGG | 0.414005 | 4_2:+5580483 | Msa0585060:CDS |
| AGCATCTTCATTGGTTTCTC+CGG | 0.415887 | 4_2:-5580551 | None:intergenic |
| GGCTTGATTGGAAAGAAATC+AGG | 0.418966 | 4_2:-5580002 | None:intergenic |
| CTGATCATTTCAATAGGCAC+TGG | 0.431825 | 4_2:+5580044 | Msa0585060:CDS |
| TCTTGCCTCTACTTGTGTGT+GGG | 0.432968 | 4_2:-5580742 | None:intergenic |
| CCTCTTGAGAGCATCTTCAT+TGG | 0.439200 | 4_2:-5580560 | None:intergenic |
| ATATTAATTACCTATGTTGT+GGG | 0.443069 | 4_2:-5578407 | None:intergenic |
| GCAAAGGTAATGAGATCTCT+TGG | 0.450334 | 4_2:+5578585 | Msa0585060:CDS |
| CTGCACAAATGGCAGCCAAA+TGG | 0.451475 | 4_2:+5580093 | Msa0585060:CDS |
| AGTATGGTTTATATATTTCA+GGG | 0.460216 | 4_2:-5575635 | None:intergenic |
| ACAAATAAAGATCAGGAAGC+TGG | 0.460216 | 4_2:+5579218 | Msa0585060:CDS |
| AGGAATTCAATAATTGCAGC+AGG | 0.463149 | 4_2:-5575839 | None:intergenic |
| GGGCAATGTTCAAGGTAAAA+GGG | 0.470464 | 4_2:-5578375 | None:intergenic |
| TAACCATTCTTAGTATTGAT+GGG | 0.470961 | 4_2:+5575795 | Msa0585060:CDS |
| GAGGAGTTCAATCTCATTGA+TGG | 0.474688 | 4_2:+5579248 | Msa0585060:CDS |
| GATTACTTTGATGTGATCTC+AGG | 0.483035 | 4_2:+5578267 | Msa0585060:CDS |
| CTTGGAGGACCCAAATATGA+TGG | 0.485178 | 4_2:+5578603 | Msa0585060:CDS |
| TATATTAATTACCTATGTTG+TGG | 0.490009 | 4_2:-5578408 | None:intergenic |
| CAAGTTGTTAGAGAGAAACT+TGG | 0.490786 | 4_2:+5578639 | Msa0585060:CDS |
| TTATTTGTGAAGTTGTGAGC+AGG | 0.494731 | 4_2:-5579203 | None:intergenic |
| TTGTGAGCAGGGAGATAAGT+AGG | 0.496729 | 4_2:-5579191 | None:intergenic |
| TGGTGTTTGCGCAAATAATC+CGG | 0.497493 | 4_2:+5579271 | Msa0585060:CDS |
| CAAGTAGAGGCAAGAAAGCC+CGG | 0.498544 | 4_2:+5580750 | Msa0585060:CDS |
| CAATAATTGCAGCAGGGATG+AGG | 0.499347 | 4_2:-5575832 | None:intergenic |
| GGAGAGGTTCACTGCACAAA+TGG | 0.505314 | 4_2:+5580082 | Msa0585060:CDS |
| CAACTTCACAAATAAAGATC+AGG | 0.505940 | 4_2:+5579211 | Msa0585060:CDS |
| TTCTTGCCTCTACTTGTGTG+TGG | 0.506302 | 4_2:-5580743 | None:intergenic |
| TCTCTCTAACAACTTGATGA+AGG | 0.508522 | 4_2:-5578632 | None:intergenic |
| TCTAAATTGACTCTGGAGAC+CGG | 0.508962 | 4_2:-5580502 | None:intergenic |
| TGATAAGATGAGAAAATGAT+TGG | 0.523309 | 4_2:-5578729 | None:intergenic |
| ATACCTGAAGGTGAGATTCA+AGG | 0.523660 | 4_2:-5575859 | None:intergenic |
| GAAATTACATAAAATTTCGA+TGG | 0.526047 | 4_2:+5575715 | Msa0585060:exon |
| TTACCAAGTTCCCATAAGTA+GGG | 0.536098 | 4_2:-5575775 | None:intergenic |
| GTTACCAAGTTCCCATAAGT+AGG | 0.539081 | 4_2:-5575776 | None:intergenic |
| GTGATCTCAGGAACAAGTAC+AGG | 0.541512 | 4_2:+5578279 | Msa0585060:CDS |
| ATTACATAAAATTTCGATGG+AGG | 0.541674 | 4_2:+5575718 | Msa0585060:exon |
| TGAATCATGAAACTAGATGC+CGG | 0.546406 | 4_2:-5580769 | None:intergenic |
| TTACATAAAATTTCGATGGA+GGG | 0.558119 | 4_2:+5575719 | Msa0585060:exon |
| GAATCATGAAACTAGATGCC+GGG | 0.560416 | 4_2:-5580768 | None:intergenic |
| TTAGATTGGCTAACACATAG+TGG | 0.560851 | 4_2:+5580122 | Msa0585060:CDS |
| TGATCATTTCAATAGGCACT+GGG | 0.562419 | 4_2:+5580045 | Msa0585060:CDS |
| TATTTGTGAAGTTGTGAGCA+GGG | 0.563364 | 4_2:-5579202 | None:intergenic |
| CTTGCCTCTACTTGTGTGTG+GGG | 0.564230 | 4_2:-5580741 | None:intergenic |
| AACCATTCTTAGTATTGATG+GGG | 0.567798 | 4_2:+5575796 | Msa0585060:CDS |
| CAAAGTCTTGATGTCAAATG+TGG | 0.569923 | 4_2:-5578703 | None:intergenic |
| ATCTGTGTGCAGGAGTTGGA+TGG | 0.573566 | 4_2:+5578225 | Msa0585060:intron |
| TGGTGCGACATTATTAGCAA+AGG | 0.581516 | 4_2:+5578569 | Msa0585060:CDS |
| TTCTTCAGTAGACATTGCTA+CGG | 0.581643 | 4_2:+5580429 | Msa0585060:intron |
| TTTATCAGGAGCAGCTAACA+TGG | 0.584220 | 4_2:-5578316 | None:intergenic |
| GAAAGTTTAGCATCCAAACA+AGG | 0.590523 | 4_2:-5579140 | None:intergenic |
| TCAGGAAGCTGGAAAAGAAG+AGG | 0.603502 | 4_2:+5579229 | Msa0585060:CDS |
| TTCAGTAGACATTGCTACGG+AGG | 0.603616 | 4_2:+5580432 | Msa0585060:intron |
| CCAATGAAGATGCTCTCAAG+AGG | 0.607291 | 4_2:+5580560 | Msa0585060:CDS |
| AGTTGGATGGTGAAGATGCA+AGG | 0.613978 | 4_2:+5578238 | Msa0585060:CDS |
| AAAGTTTAGCATCCAAACAA+GGG | 0.615469 | 4_2:-5579139 | None:intergenic |
| AGATCCCCACACACAAGTAG+AGG | 0.617675 | 4_2:+5580737 | Msa0585060:CDS |
| GCACAAATGGCAGCCAAATG+GGG | 0.620024 | 4_2:+5580095 | Msa0585060:CDS |
| AAGGTAATGAGATCTCTTGG+AGG | 0.632690 | 4_2:+5578588 | Msa0585060:CDS |
| TACCAAGTTCCCATAAGTAG+GGG | 0.646419 | 4_2:-5575774 | None:intergenic |
| ATCTCAGGAACAAGTACAGG+AGG | 0.646501 | 4_2:+5578282 | Msa0585060:CDS |
| ACCATTCTTAGTATTGATGG+GGG | 0.646720 | 4_2:+5575797 | Msa0585060:CDS |
| GGAATTCAATAATTGCAGCA+GGG | 0.658810 | 4_2:-5575838 | None:intergenic |
| GAGTTCAATCTCATTGATGG+TGG | 0.662016 | 4_2:+5579251 | Msa0585060:CDS |
| AAATGTGGGAACAACAATGT+TGG | 0.662239 | 4_2:-5578688 | None:intergenic |
| AAGTTTAGCATCCAAACAAG+GGG | 0.668793 | 4_2:-5579138 | None:intergenic |
| ACCAAGTTCCCATAAGTAGG+GGG | 0.679072 | 4_2:-5575773 | None:intergenic |
| AAAGTCTTGATGTCAAATGT+GGG | 0.692840 | 4_2:-5578702 | None:intergenic |
| AGAAAACGACCATATTCCAG+AGG | 0.710413 | 4_2:-5580023 | None:intergenic |
| TAATGGTGTGATGAAAACAA+AGG | 0.729386 | 4_2:-5575666 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTATATATAA+TGG | + | chr4_2:5578782-5578801 | Msa0585060:intron | 0.0% |
| !!! | AAAATTTATCTATATGTTTT+AGG | - | chr4_2:5576381-5576400 | None:intergenic | 10.0% |
| !!! | TTTTTTTGAAGAAATAAAAA+TGG | + | chr4_2:5576408-5576427 | Msa0585060:intron | 10.0% |
| !!! | TCTGTTTAATAAATTTTTTT+GGG | - | chr4_2:5577718-5577737 | None:intergenic | 10.0% |
| !!! | TAATTTTATCTATATGTTTT+GGG | - | chr4_2:5577904-5577923 | None:intergenic | 10.0% |
| !!! | TTAATTTTATCTATATGTTT+TGG | - | chr4_2:5577905-5577924 | None:intergenic | 10.0% |
| !! | GACAAAATATATAATTTATT+TGG | - | chr4_2:5579034-5579053 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAAAAAGGTAT+AGG | - | chr4_2:5580268-5580287 | None:intergenic | 10.0% |
| !!! | AATTTCTCTTAAGTTTTTTT+TGG | - | chr4_2:5575701-5575720 | None:intergenic | 15.0% |
| !! | AAATGGAATTATATTAACAA+CGG | + | chr4_2:5576425-5576444 | Msa0585060:intron | 15.0% |
| !!! | CTGTTTAATAAATTTTTTTG+GGG | - | chr4_2:5577717-5577736 | None:intergenic | 15.0% |
| !!! | CTCTGTTTAATAAATTTTTT+TGG | - | chr4_2:5577719-5577738 | None:intergenic | 15.0% |
| !!! | TAATTTATGTTTATTTTTCG+TGG | - | chr4_2:5577998-5578017 | None:intergenic | 15.0% |
| !!! | CTCTAAAAAAAAGTTTTTAT+TGG | + | chr4_2:5578525-5578544 | Msa0585060:intron | 15.0% |
| !! | TAAATTAATTAGTTGTTGAT+TGG | + | chr4_2:5579315-5579334 | Msa0585060:intron | 15.0% |
| !! | TTGTTTATTTATATATTCGT+TGG | - | chr4_2:5579397-5579416 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTATGGTAGT+AGG | + | chr4_2:5580279-5580298 | Msa0585060:intron | 15.0% |
| !! | AGTATGGTTTATATATTTCA+GGG | - | chr4_2:5575638-5575657 | None:intergenic | 20.0% |
| !!! | TTTTTTGGAGTAAAGATTAA+TGG | - | chr4_2:5575686-5575705 | None:intergenic | 20.0% |
| !! | GAAATTACATAAAATTTCGA+TGG | + | chr4_2:5575715-5575734 | Msa0585060:exon | 20.0% |
| !! | CATATATATAATATACCTGA+AGG | - | chr4_2:5575874-5575893 | None:intergenic | 20.0% |
| !!! | TTGTTTTCTTTTTCCATAAA+TGG | + | chr4_2:5576030-5576049 | Msa0585060:intron | 20.0% |
| !! | TTTAACTAGAAATCCATTTA+TGG | - | chr4_2:5576046-5576065 | None:intergenic | 20.0% |
| !!! | GAAAGTTTTTATATGTAAGT+TGG | + | chr4_2:5576140-5576159 | Msa0585060:intron | 20.0% |
| !! | ATTTATTATGCAAACTATCT+TGG | + | chr4_2:5576200-5576219 | Msa0585060:intron | 20.0% |
| !!! | AAAAAAAAGTGTCCTTTTTT+AGG | + | chr4_2:5576266-5576285 | Msa0585060:intron | 20.0% |
| !!! | AAAAAAAGTGTCCTTTTTTA+GGG | + | chr4_2:5576267-5576286 | Msa0585060:intron | 20.0% |
| !! | AGATTTAACAGTTTATACAA+CGG | + | chr4_2:5576339-5576358 | Msa0585060:intron | 20.0% |
| !! | CATCAATTTACTCATTATTT+AGG | - | chr4_2:5576763-5576782 | None:intergenic | 20.0% |
| !! | GAATTTAATATAGCATTGTT+AGG | - | chr4_2:5577600-5577619 | None:intergenic | 20.0% |
| !!! | TTAATAAATTTTTTTGGGGT+GGG | - | chr4_2:5577713-5577732 | None:intergenic | 20.0% |
| !!! | TTTAATAAATTTTTTTGGGG+TGG | - | chr4_2:5577714-5577733 | None:intergenic | 20.0% |
| !! | ATATTAATTACCTATGTTGT+GGG | - | chr4_2:5578410-5578429 | None:intergenic | 20.0% |
| !! | TATATTAATTACCTATGTTG+TGG | - | chr4_2:5578411-5578430 | None:intergenic | 20.0% |
| !! | CTTCTATTTGTAATTATTTG+AGG | + | chr4_2:5578463-5578482 | Msa0585060:intron | 20.0% |
| !!! | ATGTATTTTAAATCCACAAT+TGG | - | chr4_2:5578815-5578834 | None:intergenic | 20.0% |
| !!! | CTTTGAAATAAAACTATTGT+TGG | - | chr4_2:5579071-5579090 | None:intergenic | 20.0% |
| !! | TCAAAATTTGTATTATGCAA+TGG | + | chr4_2:5579461-5579480 | Msa0585060:intron | 20.0% |
| !! | TTCAAAAATAAAAGACAAAG+TGG | - | chr4_2:5579509-5579528 | None:intergenic | 20.0% |
| !!! | GGTAAAACTTTTTACATTAA+CGG | + | chr4_2:5579746-5579765 | Msa0585060:intron | 20.0% |
| !!! | TTTGTTATTTTTTATGATCC+AGG | + | chr4_2:5579932-5579951 | Msa0585060:intron | 20.0% |
| !! | TGAGTAAAAACATCAATTAA+GGG | - | chr4_2:5580155-5580174 | None:intergenic | 20.0% |
| !! | TTGAGTAAAAACATCAATTA+AGG | - | chr4_2:5580156-5580175 | None:intergenic | 20.0% |
| !! | TGATGTACAAGATATATTAA+TGG | - | chr4_2:5580333-5580352 | None:intergenic | 20.0% |
| !! | TTAATAAATTCTCACCAATT+TGG | - | chr4_2:5580477-5580496 | None:intergenic | 20.0% |
| !! | TGAGAATTTATTAAAGAAAC+CGG | + | chr4_2:5580483-5580502 | Msa0585060:CDS | 20.0% |
| !! | TTAAGATTAATTAGTAGAGA+TGG | + | chr4_2:5580586-5580605 | Msa0585060:intron | 20.0% |
| !! | TTGTTGCACAATTATAATTT+GGG | - | chr4_2:5580628-5580647 | None:intergenic | 20.0% |
| !! | ATTGTTGCACAATTATAATT+TGG | - | chr4_2:5580629-5580648 | None:intergenic | 20.0% |
| !! | TATTCTATTCTAATACATTC+AGG | + | chr4_2:5580672-5580691 | Msa0585060:intron | 20.0% |
| ! | GAGTATGGTTTATATATTTC+AGG | - | chr4_2:5575639-5575658 | None:intergenic | 25.0% |
| ! | ATTACATAAAATTTCGATGG+AGG | + | chr4_2:5575718-5575737 | Msa0585060:exon | 25.0% |
| ! | TTACATAAAATTTCGATGGA+GGG | + | chr4_2:5575719-5575738 | Msa0585060:exon | 25.0% |
| !!! | TAACCATTCTTAGTATTGAT+GGG | + | chr4_2:5575795-5575814 | Msa0585060:CDS | 25.0% |
| !!! | TGAAAGTACCTTGTATATAT+TGG | + | chr4_2:5575892-5575911 | Msa0585060:intron | 25.0% |
| ! | CTAAAATTCTAACTCTAAGT+AGG | - | chr4_2:5575928-5575947 | None:intergenic | 25.0% |
| !!! | AAAAAAGTGTCCTTTTTTAG+GGG | + | chr4_2:5576268-5576287 | Msa0585060:intron | 25.0% |
| ! | ACAAAAAATTCCCCTAAAAA+AGG | - | chr4_2:5576281-5576300 | None:intergenic | 25.0% |
| !! | TATACTGTGTAATGTTTTGT+CGG | - | chr4_2:5576493-5576512 | None:intergenic | 25.0% |
| !!! | AATAAAACCACTTTTGTGTA+TGG | - | chr4_2:5576580-5576599 | None:intergenic | 25.0% |
| ! | AACAAATAAGTTTAGTACAG+TGG | - | chr4_2:5577289-5577308 | None:intergenic | 25.0% |
| ! | CTATTAAAACTAGATTAACG+AGG | - | chr4_2:5577866-5577885 | None:intergenic | 25.0% |
| !!! | GTTTTAATAGTATGAATCAC+AGG | + | chr4_2:5577876-5577895 | Msa0585060:intron | 25.0% |
| ! | TAGCAAAAGAAATTTAGAGA+TGG | + | chr4_2:5578016-5578035 | Msa0585060:intron | 25.0% |
| !! | TATGTTGTGGGAAAATTTTA+GGG | - | chr4_2:5578398-5578417 | None:intergenic | 25.0% |
| !!! | TGAGGAATTCAAGTTTTTTA+TGG | + | chr4_2:5578496-5578515 | Msa0585060:intron | 25.0% |
| !!! | ATTGGTTCAATTTTTTGTAG+AGG | + | chr4_2:5578543-5578562 | Msa0585060:intron | 25.0% |
| !! | AGGTATTTTCCATCATATTT+GGG | - | chr4_2:5578615-5578634 | None:intergenic | 25.0% |
| !!! | AAGGTATTTTCCATCATATT+TGG | - | chr4_2:5578616-5578635 | None:intergenic | 25.0% |
| ! | TGATAAGATGAGAAAATGAT+TGG | - | chr4_2:5578732-5578751 | None:intergenic | 25.0% |
| !! | AATCATTTTCTCATCTTATC+AGG | + | chr4_2:5578731-5578750 | Msa0585060:CDS | 25.0% |
| ! | TAGTTTAGTTAAGAATCGTT+TGG | + | chr4_2:5578927-5578946 | Msa0585060:intron | 25.0% |
| ! | AGTTTAGTTAAGAATCGTTT+GGG | + | chr4_2:5578928-5578947 | Msa0585060:intron | 25.0% |
| !!! | TTTATTTGGTCTTAAAACTG+TGG | - | chr4_2:5579020-5579039 | None:intergenic | 25.0% |
| ! | AATTGATTATTTGCACATAC+CGG | - | chr4_2:5579293-5579312 | None:intergenic | 25.0% |
| ! | ACTAAATCCCAATTACATTA+TGG | + | chr4_2:5579549-5579568 | Msa0585060:intron | 25.0% |
| ! | CATACATCCATAATGTAATT+GGG | - | chr4_2:5579559-5579578 | None:intergenic | 25.0% |
| !!! | GATGTATGCACTTTTTATTT+TGG | + | chr4_2:5579571-5579590 | Msa0585060:intron | 25.0% |
| ! | TGAAGAAAGAAACTCAAATA+AGG | + | chr4_2:5579843-5579862 | Msa0585060:intron | 25.0% |
| ! | TAACAAATTCAACAAAATGC+AGG | + | chr4_2:5580384-5580403 | Msa0585060:intron | 25.0% |
| TAATGGTGTGATGAAAACAA+AGG | - | chr4_2:5575669-5575688 | None:intergenic | 30.0% | |
| ! | GTAACCATTCTTAGTATTGA+TGG | + | chr4_2:5575794-5575813 | Msa0585060:CDS | 30.0% |
| !! | AACCATTCTTAGTATTGATG+GGG | + | chr4_2:5575796-5575815 | Msa0585060:CDS | 30.0% |
| ! | TACCTTGTATATATTGGCTA+TGG | + | chr4_2:5575898-5575917 | Msa0585060:intron | 30.0% |
| !! | GTAAGTTGGTTCCATAATAA+TGG | + | chr4_2:5576154-5576173 | Msa0585060:intron | 30.0% |
| ! | ATACTGTGTAATGTTTTGTC+GGG | - | chr4_2:5576492-5576511 | None:intergenic | 30.0% |
| TTTATCTAACAGATGCTCAA+TGG | + | chr4_2:5576633-5576652 | Msa0585060:intron | 30.0% | |
| TGTTATGGCTTCTTTGTATT+TGG | - | chr4_2:5576708-5576727 | None:intergenic | 30.0% | |
| GTTCGTTCTTACAATTGTTA+TGG | - | chr4_2:5576723-5576742 | None:intergenic | 30.0% | |
| TCATTATTTAGGTCTTTCGA+AGG | - | chr4_2:5576752-5576771 | None:intergenic | 30.0% | |
| !!! | ATAGGGTATCGAAAGTTTTA+GGG | - | chr4_2:5577398-5577417 | None:intergenic | 30.0% |
| ATATAGCATTGTTAGGCAAA+TGG | - | chr4_2:5577593-5577612 | None:intergenic | 30.0% | |
| ATGAGAGAAATTATACCTGA+CGG | + | chr4_2:5577744-5577763 | Msa0585060:intron | 30.0% | |
| CAAAGTCGTTTCTTATCTTT+CGG | - | chr4_2:5577840-5577859 | None:intergenic | 30.0% | |
| TTAAAACTAGATTAACGAGG+TGG | - | chr4_2:5577863-5577882 | None:intergenic | 30.0% | |
| TTCAGACACTAACACTTAAT+AGG | + | chr4_2:5577949-5577968 | Msa0585060:intron | 30.0% | |
| TCAGACACTAACACTTAATA+GGG | + | chr4_2:5577950-5577969 | Msa0585060:intron | 30.0% | |
| !! | TATGTTTATTTTTCGTGGCT+AGG | - | chr4_2:5577993-5578012 | None:intergenic | 30.0% |
| ! | AATTCAGTCACAGAATTTTG+CGG | + | chr4_2:5578059-5578078 | Msa0585060:intron | 30.0% |
| !!! | AGTGGACGATTATTTTTATC+AGG | - | chr4_2:5578333-5578352 | None:intergenic | 30.0% |
| !!! | AAATTTTAGGGCAATGTTCA+AGG | - | chr4_2:5578386-5578405 | None:intergenic | 30.0% |
| ! | CTATGTTGTGGGAAAATTTT+AGG | - | chr4_2:5578399-5578418 | None:intergenic | 30.0% |
| ! | CTAAAATTTTCCCACAACAT+AGG | + | chr4_2:5578397-5578416 | Msa0585060:CDS | 30.0% |
| ! | ATTTGAGGTGTATATACTTG+AGG | + | chr4_2:5578478-5578497 | Msa0585060:intron | 30.0% |
| !!! | TCAATTTTTTGTAGAGGACT+TGG | + | chr4_2:5578549-5578568 | Msa0585060:intron | 30.0% |
| AAAGTCTTGATGTCAAATGT+GGG | - | chr4_2:5578705-5578724 | None:intergenic | 30.0% | |
| CTGAAACAATTATAGATCTC+AGG | + | chr4_2:5578973-5578992 | Msa0585060:intron | 30.0% | |
| !! | ACTGTGGTTTTTCTAAAGAT+AGG | - | chr4_2:5579004-5579023 | None:intergenic | 30.0% |
| AAAGTTTAGCATCCAAACAA+GGG | - | chr4_2:5579142-5579161 | None:intergenic | 30.0% | |
| CAACTTCACAAATAAAGATC+AGG | + | chr4_2:5579211-5579230 | Msa0585060:CDS | 30.0% | |
| GTATTATGCAATGGCATATA+TGG | + | chr4_2:5579470-5579489 | Msa0585060:intron | 30.0% | |
| ! | AGACAAAGTGGATTTAATCA+TGG | - | chr4_2:5579497-5579516 | None:intergenic | 30.0% |
| GCATACATCCATAATGTAAT+TGG | - | chr4_2:5579560-5579579 | None:intergenic | 30.0% | |
| ! | CGTTTTCTGATCATTTCAAT+AGG | + | chr4_2:5580038-5580057 | Msa0585060:CDS | 30.0% |
| !! | GATGTTTTTACTCAATCAAG+TGG | + | chr4_2:5580161-5580180 | Msa0585060:CDS | 30.0% |
| TGATAATTACCTTCGAATTC+AGG | + | chr4_2:5580235-5580254 | Msa0585060:intron | 30.0% | |
| TTGAAGAAACTATGCCAAAT+TGG | + | chr4_2:5580460-5580479 | Msa0585060:CDS | 30.0% | |
| TCCAGAGTCAATTTAGAAAA+TGG | + | chr4_2:5580508-5580527 | Msa0585060:CDS | 30.0% | |
| !! | ACCATTTTCTAAATTGACTC+TGG | - | chr4_2:5580512-5580531 | None:intergenic | 30.0% |
| TTGCACAATTATAATTTGGG+TGG | - | chr4_2:5580625-5580644 | None:intergenic | 30.0% | |
| CAAAAATACTTTCACAAGAG+AGG | + | chr4_2:5580699-5580718 | Msa0585060:CDS | 30.0% | |
| AACAAAGGCTGTATAGAGTA+TGG | - | chr4_2:5575654-5575673 | None:intergenic | 35.0% | |
| TTACCAAGTTCCCATAAGTA+GGG | - | chr4_2:5575778-5575797 | None:intergenic | 35.0% | |
| !! | ACCATTCTTAGTATTGATGG+GGG | + | chr4_2:5575797-5575816 | Msa0585060:CDS | 35.0% |
| GGAATTCAATAATTGCAGCA+GGG | - | chr4_2:5575841-5575860 | None:intergenic | 35.0% | |
| AGGAATTCAATAATTGCAGC+AGG | - | chr4_2:5575842-5575861 | None:intergenic | 35.0% | |
| AGCCATAGCCAATATATACA+AGG | - | chr4_2:5575903-5575922 | None:intergenic | 35.0% | |
| GTTCCATAATAATGGCAGTA+GGG | + | chr4_2:5576162-5576181 | Msa0585060:intron | 35.0% | |
| TTATGCAAACTATCTTGGTG+AGG | + | chr4_2:5576205-5576224 | Msa0585060:intron | 35.0% | |
| ! | TAGTGCAGCTACTTTATGAA+AGG | + | chr4_2:5576229-5576248 | Msa0585060:intron | 35.0% |
| TTGTGTATGGTTCTCAGAAT+TGG | - | chr4_2:5576567-5576586 | None:intergenic | 35.0% | |
| AAGTTAAACTTCACTCGTTG+TGG | - | chr4_2:5576615-5576634 | None:intergenic | 35.0% | |
| ATCCAAAAACCTGACAATGA+AGG | + | chr4_2:5576854-5576873 | Msa0585060:intron | 35.0% | |
| ! | TTCCTTCATTGTCAGGTTTT+TGG | - | chr4_2:5576859-5576878 | None:intergenic | 35.0% |
| AACTTGTGTATTTCAGGATG+CGG | - | chr4_2:5576907-5576926 | None:intergenic | 35.0% | |
| !!! | TAGGGTATCGAAAGTTTTAG+GGG | - | chr4_2:5577397-5577416 | None:intergenic | 35.0% |
| !!! | GATAGGGTATCGAAAGTTTT+AGG | - | chr4_2:5577399-5577418 | None:intergenic | 35.0% |
| ATTTGTTCTCAAAAGGAGTG+TGG | - | chr4_2:5577648-5577667 | None:intergenic | 35.0% | |
| GGATAACAGGAAAATTTCCT+GGG | - | chr4_2:5577685-5577704 | None:intergenic | 35.0% | |
| AGGATAACAGGAAAATTTCC+TGG | - | chr4_2:5577686-5577705 | None:intergenic | 35.0% | |
| TGGCTAGGTTTATTAGTAGT+TGG | - | chr4_2:5577978-5577997 | None:intergenic | 35.0% | |
| !! | AATTAAGTTGATCTGTGTGC+AGG | + | chr4_2:5578215-5578234 | Msa0585060:intron | 35.0% |
| GATTACTTTGATGTGATCTC+AGG | + | chr4_2:5578267-5578286 | Msa0585060:CDS | 35.0% | |
| ATATCTTTGGCAGCAAAAAG+TGG | - | chr4_2:5578351-5578370 | None:intergenic | 35.0% | |
| GTAAAAGGGCTTGATATCTT+TGG | - | chr4_2:5578364-5578383 | None:intergenic | 35.0% | |
| TCTCTCTAACAACTTGATGA+AGG | - | chr4_2:5578635-5578654 | None:intergenic | 35.0% | |
| CAAGTTGTTAGAGAGAAACT+TGG | + | chr4_2:5578639-5578658 | Msa0585060:CDS | 35.0% | |
| AAATGTGGGAACAACAATGT+TGG | - | chr4_2:5578691-5578710 | None:intergenic | 35.0% | |
| CAAAGTCTTGATGTCAAATG+TGG | - | chr4_2:5578706-5578725 | None:intergenic | 35.0% | |
| TAATGGAATGTTGCCAATTG+TGG | + | chr4_2:5578799-5578818 | Msa0585060:intron | 35.0% | |
| GTCAAGTTATTGAACTCAAG+TGG | + | chr4_2:5578897-5578916 | Msa0585060:intron | 35.0% | |
| AAGTTTAGCATCCAAACAAG+GGG | - | chr4_2:5579141-5579160 | None:intergenic | 35.0% | |
| GAAAGTTTAGCATCCAAACA+AGG | - | chr4_2:5579143-5579162 | None:intergenic | 35.0% | |
| TATTTGTGAAGTTGTGAGCA+GGG | - | chr4_2:5579205-5579224 | None:intergenic | 35.0% | |
| TTATTTGTGAAGTTGTGAGC+AGG | - | chr4_2:5579206-5579225 | None:intergenic | 35.0% | |
| ACAAATAAAGATCAGGAAGC+TGG | + | chr4_2:5579218-5579237 | Msa0585060:CDS | 35.0% | |
| ! | AAGATTGTTGTGTGCTGATA+TGG | + | chr4_2:5579725-5579744 | Msa0585060:intron | 35.0% |
| TGATCATTTCAATAGGCACT+GGG | + | chr4_2:5580045-5580064 | Msa0585060:CDS | 35.0% | |
| CCAATCTAATAATCCCCATT+TGG | - | chr4_2:5580111-5580130 | None:intergenic | 35.0% | |
| CCAAATGGGGATTATTAGAT+TGG | + | chr4_2:5580108-5580127 | Msa0585060:CDS | 35.0% | |
| ! | TTAGATTGGCTAACACATAG+TGG | + | chr4_2:5580122-5580141 | Msa0585060:CDS | 35.0% |
| TACTCAATCAAGTGGTGATA+TGG | + | chr4_2:5580169-5580188 | Msa0585060:intron | 35.0% | |
| ! | GGAATTTTACCTGAATTCGA+AGG | - | chr4_2:5580247-5580266 | None:intergenic | 35.0% |
| TTCTTCAGTAGACATTGCTA+CGG | + | chr4_2:5580429-5580448 | Msa0585060:intron | 35.0% | |
| TGAATCATGAAACTAGATGC+CGG | - | chr4_2:5580772-5580791 | None:intergenic | 35.0% | |
| AAATTCAGCCCCCTACTTAT+GGG | + | chr4_2:5575765-5575784 | Msa0585060:CDS | 40.0% | |
| TACCAAGTTCCCATAAGTAG+GGG | - | chr4_2:5575777-5575796 | None:intergenic | 40.0% | |
| GTTACCAAGTTCCCATAAGT+AGG | - | chr4_2:5575779-5575798 | None:intergenic | 40.0% | |
| TCCCCCATCAATACTAAGAA+TGG | - | chr4_2:5575801-5575820 | None:intergenic | 40.0% | |
| !! | ATTCTTAGTATTGATGGGGG+AGG | + | chr4_2:5575800-5575819 | Msa0585060:CDS | 40.0% |
| !! | TATTGATGGGGGAGGTATTA+GGG | + | chr4_2:5575808-5575827 | Msa0585060:CDS | 40.0% |
| ATTCCTTGAATCTCACCTTC+AGG | + | chr4_2:5575856-5575875 | Msa0585060:CDS | 40.0% | |
| ATACCTGAAGGTGAGATTCA+AGG | - | chr4_2:5575862-5575881 | None:intergenic | 40.0% | |
| GGTTCCATAATAATGGCAGT+AGG | + | chr4_2:5576161-5576180 | Msa0585060:intron | 40.0% | |
| CATCCCTACTGCCATTATTA+TGG | - | chr4_2:5576168-5576187 | None:intergenic | 40.0% | |
| GTTGACAAATCCTCAGTACA+AGG | + | chr4_2:5576449-5576468 | Msa0585060:intron | 40.0% | |
| ! | TGTGTAATGTTTTGTCGGGT+TGG | - | chr4_2:5576488-5576507 | None:intergenic | 40.0% |
| TCGATACCCACACACAATAA+AGG | + | chr4_2:5576532-5576551 | Msa0585060:intron | 40.0% | |
| CGATACCCACACACAATAAA+GGG | + | chr4_2:5576533-5576552 | Msa0585060:intron | 40.0% | |
| TCGAACCCTTTATTGTGTGT+GGG | - | chr4_2:5576541-5576560 | None:intergenic | 40.0% | |
| TGTATGGTTCTCAGAATTGG+TGG | - | chr4_2:5576564-5576583 | None:intergenic | 40.0% | |
| CTGAGAACCATACACAAAAG+TGG | + | chr4_2:5576570-5576589 | Msa0585060:intron | 40.0% | |
| TTAAACTTCACTCGTTGTGG+TGG | - | chr4_2:5576612-5576631 | None:intergenic | 40.0% | |
| TTCTTTGTATTTGGCTGGTG+TGG | - | chr4_2:5576699-5576718 | None:intergenic | 40.0% | |
| ATGGCTTCTTTGTATTTGGC+TGG | - | chr4_2:5576704-5576723 | None:intergenic | 40.0% | |
| AATCGTATCAGATCCTGGAT+TGG | - | chr4_2:5576826-5576845 | None:intergenic | 40.0% | |
| ! | TTTGGAATCGTATCAGATCC+TGG | - | chr4_2:5576831-5576850 | None:intergenic | 40.0% |
| AAACCTGACAATGAAGGAAC+AGG | + | chr4_2:5576860-5576879 | Msa0585060:intron | 40.0% | |
| GCAGACAACTTGTGTATTTC+AGG | - | chr4_2:5576913-5576932 | None:intergenic | 40.0% | |
| ! | CTTTGGAGGTTGAGTTTAGT+GGG | + | chr4_2:5576952-5576971 | Msa0585060:intron | 40.0% |
| GGGTCATTGATGTCAAAACA+TGG | + | chr4_2:5577070-5577089 | Msa0585060:intron | 40.0% | |
| GTGTAACCGTCATGAATATC+CGG | + | chr4_2:5577108-5577127 | Msa0585060:intron | 40.0% | |
| TAGGCGATGTTCCTTTATGT+AGG | - | chr4_2:5577338-5577357 | None:intergenic | 40.0% | |
| ! | TCTCTTTTGGCAGGATAGAT+GGG | - | chr4_2:5577361-5577380 | None:intergenic | 40.0% |
| ! | ATGGAACAAGCACTCTCTTT+TGG | - | chr4_2:5577374-5577393 | None:intergenic | 40.0% |
| !!! | GTATCGAAAGTTTTAGGGGA+TGG | - | chr4_2:5577393-5577412 | None:intergenic | 40.0% |
| CATTGTTAGGCAAATGGTGT+TGG | - | chr4_2:5577587-5577606 | None:intergenic | 40.0% | |
| GGGCTCTATTTGTTCTCAAA+AGG | - | chr4_2:5577655-5577674 | None:intergenic | 40.0% | |
| AAAATTTCCTGGGTTGCTTG+GGG | - | chr4_2:5577675-5577694 | None:intergenic | 40.0% | |
| GAAAATTTCCTGGGTTGCTT+GGG | - | chr4_2:5577676-5577695 | None:intergenic | 40.0% | |
| ! | AAAAAGGAAAGAGCGTAGAC+AGG | + | chr4_2:5577774-5577793 | Msa0585060:intron | 40.0% |
| CAGACTTGAGGAGAACTAAA+CGG | + | chr4_2:5577811-5577830 | Msa0585060:intron | 40.0% | |
| AGTCGTTTCTTATCTTTCGG+CGG | - | chr4_2:5577837-5577856 | None:intergenic | 40.0% | |
| TTTATCAGGAGCAGCTAACA+TGG | - | chr4_2:5578319-5578338 | None:intergenic | 40.0% | |
| GGGCAATGTTCAAGGTAAAA+GGG | - | chr4_2:5578378-5578397 | None:intergenic | 40.0% | |
| AGGGCAATGTTCAAGGTAAA+AGG | - | chr4_2:5578379-5578398 | None:intergenic | 40.0% | |
| TGGTGCGACATTATTAGCAA+AGG | + | chr4_2:5578569-5578588 | Msa0585060:CDS | 40.0% | |
| GCAAAGGTAATGAGATCTCT+TGG | + | chr4_2:5578585-5578604 | Msa0585060:CDS | 40.0% | |
| AAGGTAATGAGATCTCTTGG+AGG | + | chr4_2:5578588-5578607 | Msa0585060:CDS | 40.0% | |
| GAGGAGTTCAATCTCATTGA+TGG | + | chr4_2:5579248-5579267 | Msa0585060:CDS | 40.0% | |
| GAGTTCAATCTCATTGATGG+TGG | + | chr4_2:5579251-5579270 | Msa0585060:CDS | 40.0% | |
| TGGTGTTTGCGCAAATAATC+CGG | + | chr4_2:5579271-5579290 | Msa0585060:CDS | 40.0% | |
| CATTCATTGCAACTAAAGCC+TGG | - | chr4_2:5579953-5579972 | None:intergenic | 40.0% | |
| GGCTTGATTGGAAAGAAATC+AGG | - | chr4_2:5580005-5580024 | None:intergenic | 40.0% | |
| TTTCTTTCCAATCAAGCCTC+TGG | + | chr4_2:5580007-5580026 | Msa0585060:CDS | 40.0% | |
| AGAAAACGACCATATTCCAG+AGG | - | chr4_2:5580026-5580045 | None:intergenic | 40.0% | |
| CTGATCATTTCAATAGGCAC+TGG | + | chr4_2:5580044-5580063 | Msa0585060:CDS | 40.0% | |
| ATGGTAGTAGGAGTCGAATT+CGG | + | chr4_2:5580291-5580310 | Msa0585060:intron | 40.0% | |
| TATTAATGGCGTAACCTCTG+AGG | - | chr4_2:5580319-5580338 | None:intergenic | 40.0% | |
| TAGATATAGCGCAAGCTAAG+TGG | - | chr4_2:5580357-5580376 | None:intergenic | 40.0% | |
| ATGCAGGATGATACATTGAC+AGG | + | chr4_2:5580400-5580419 | Msa0585060:intron | 40.0% | |
| ! | TCTAAATTGACTCTGGAGAC+CGG | - | chr4_2:5580505-5580524 | None:intergenic | 40.0% |
| ! | CATTTTGAGCCACTAACAAC+CGG | + | chr4_2:5580532-5580551 | Msa0585060:CDS | 40.0% |
| !! | AGCATCTTCATTGGTTTCTC+CGG | - | chr4_2:5580554-5580573 | None:intergenic | 40.0% |
| GAATCATGAAACTAGATGCC+GGG | - | chr4_2:5580771-5580790 | None:intergenic | 40.0% | |
| CAAATTCAGCCCCCTACTTA+TGG | + | chr4_2:5575764-5575783 | Msa0585060:CDS | 45.0% | |
| ACCAAGTTCCCATAAGTAGG+GGG | - | chr4_2:5575776-5575795 | None:intergenic | 45.0% | |
| !! | GTATTGATGGGGGAGGTATT+AGG | + | chr4_2:5575807-5575826 | Msa0585060:CDS | 45.0% |
| !! | ATTGATGGGGGAGGTATTAG+GGG | + | chr4_2:5575809-5575828 | Msa0585060:CDS | 45.0% |
| CAATAATTGCAGCAGGGATG+AGG | - | chr4_2:5575835-5575854 | None:intergenic | 45.0% | |
| CTCTAGTACACCTTGTACTG+AGG | - | chr4_2:5576462-5576481 | None:intergenic | 45.0% | |
| CTCAGTACAAGGTGTACTAG+AGG | + | chr4_2:5576460-5576479 | Msa0585060:intron | 45.0% | |
| GTCGAACCCTTTATTGTGTG+TGG | - | chr4_2:5576542-5576561 | None:intergenic | 45.0% | |
| !! | GTCAGGTTTTTGGATCGCTT+TGG | - | chr4_2:5576849-5576868 | None:intergenic | 45.0% |
| TCACCTGTTCCTTCATTGTC+AGG | - | chr4_2:5576866-5576885 | None:intergenic | 45.0% | |
| ATGAAGGAACAGGTGAACTG+CGG | + | chr4_2:5576870-5576889 | Msa0585060:intron | 45.0% | |
| CCACTAAACTCAACCTCCAA+AGG | - | chr4_2:5576954-5576973 | None:intergenic | 45.0% | |
| ! | CCTTTGGAGGTTGAGTTTAG+TGG | + | chr4_2:5576951-5576970 | Msa0585060:intron | 45.0% |
| GCAACAATGGAGACCTTCAA+AGG | + | chr4_2:5577000-5577019 | Msa0585060:intron | 45.0% | |
| GCATAAGCAGGTTCCTTTGA+AGG | - | chr4_2:5577016-5577035 | None:intergenic | 45.0% | |
| AACATGGTAAGCGCCTCTAA+CGG | + | chr4_2:5577086-5577105 | Msa0585060:intron | 45.0% | |
| TGGGATCCGGATATTCATGA+CGG | - | chr4_2:5577117-5577136 | None:intergenic | 45.0% | |
| TGCCACCTGTCAGAAACATT+AGG | + | chr4_2:5577138-5577157 | Msa0585060:intron | 45.0% | |
| ! | AGCCTAATGTTTCTGACAGG+TGG | - | chr4_2:5577143-5577162 | None:intergenic | 45.0% |
| ! | TGCAGCCTAATGTTTCTGAC+AGG | - | chr4_2:5577146-5577165 | None:intergenic | 45.0% |
| ! | AGACATGGTAGAGGAGTGTA+GGG | - | chr4_2:5577190-5577209 | None:intergenic | 45.0% |
| ! | AAGACATGGTAGAGGAGTGT+AGG | - | chr4_2:5577191-5577210 | None:intergenic | 45.0% |
| GCGATGTTCCTTTATGTAGG+AGG | - | chr4_2:5577335-5577354 | None:intergenic | 45.0% | |
| ! | TTTTGGCAGGATAGATGGGT+AGG | - | chr4_2:5577357-5577376 | None:intergenic | 45.0% |
| ! | CTCTCTTTTGGCAGGATAGA+TGG | - | chr4_2:5577362-5577381 | None:intergenic | 45.0% |
| ! | AACAAGCACTCTCTTTTGGC+AGG | - | chr4_2:5577370-5577389 | None:intergenic | 45.0% |
| !! | TGGTGGCTGGTTTGAAGATA+GGG | - | chr4_2:5577415-5577434 | None:intergenic | 45.0% |
| !! | ATGGTGGCTGGTTTGAAGAT+AGG | - | chr4_2:5577416-5577435 | None:intergenic | 45.0% |
| GATGGAGTAGGAGAGATTGA+TGG | - | chr4_2:5577435-5577454 | None:intergenic | 45.0% | |
| !! | GTTCTGGTTTAGGGTATTGG+CGG | - | chr4_2:5577541-5577560 | None:intergenic | 45.0% |
| !! | TGGGTTCTGGTTTAGGGTAT+TGG | - | chr4_2:5577544-5577563 | None:intergenic | 45.0% |
| !! | TAGAGGTGGGTTCTGGTTTA+GGG | - | chr4_2:5577550-5577569 | None:intergenic | 45.0% |
| !! | ATAGAGGTGGGTTCTGGTTT+AGG | - | chr4_2:5577551-5577570 | None:intergenic | 45.0% |
| ! | CAAATGGTGTTGGAGGATGT+TGG | - | chr4_2:5577577-5577596 | None:intergenic | 45.0% |
| ! | TGTTAGGCAAATGGTGTTGG+AGG | - | chr4_2:5577584-5577603 | None:intergenic | 45.0% |
| ! | AAAAGGAGTGTGGAGGTTTG+GGG | - | chr4_2:5577638-5577657 | None:intergenic | 45.0% |
| ! | CAAAAGGAGTGTGGAGGTTT+GGG | - | chr4_2:5577639-5577658 | None:intergenic | 45.0% |
| ! | TCAAAAGGAGTGTGGAGGTT+TGG | - | chr4_2:5577640-5577659 | None:intergenic | 45.0% |
| ! | TGTTCTCAAAAGGAGTGTGG+AGG | - | chr4_2:5577645-5577664 | None:intergenic | 45.0% |
| GGAAAATTTCCTGGGTTGCT+TGG | - | chr4_2:5577677-5577696 | None:intergenic | 45.0% | |
| !!! | ATTTTTTTGGGGTGGGAGTG+AGG | - | chr4_2:5577706-5577725 | None:intergenic | 45.0% |
| !! | ACCTGACGGAGCTTTGAAAA+AGG | + | chr4_2:5577758-5577777 | Msa0585060:intron | 45.0% |
| !!! | TCCTTTTTCAAAGCTCCGTC+AGG | - | chr4_2:5577762-5577781 | None:intergenic | 45.0% |
| AGTTGGATGGTGAAGATGCA+AGG | + | chr4_2:5578238-5578257 | Msa0585060:CDS | 45.0% | |
| GTGATCTCAGGAACAAGTAC+AGG | + | chr4_2:5578279-5578298 | Msa0585060:CDS | 45.0% | |
| ATCTCAGGAACAAGTACAGG+AGG | + | chr4_2:5578282-5578301 | Msa0585060:CDS | 45.0% | |
| CTTGGAGGACCCAAATATGA+TGG | + | chr4_2:5578603-5578622 | Msa0585060:CDS | 45.0% | |
| TTGTGAGCAGGGAGATAAGT+AGG | - | chr4_2:5579194-5579213 | None:intergenic | 45.0% | |
| TCAGGAAGCTGGAAAAGAAG+AGG | + | chr4_2:5579229-5579248 | Msa0585060:CDS | 45.0% | |
| CCATATTCCAGAGGCTTGAT+TGG | - | chr4_2:5580017-5580036 | None:intergenic | 45.0% | |
| !! | CCAATCAAGCCTCTGGAATA+TGG | + | chr4_2:5580014-5580033 | Msa0585060:CDS | 45.0% |
| CACTGGGACTGCAAAAAATG+AGG | + | chr4_2:5580061-5580080 | Msa0585060:CDS | 45.0% | |
| GGACTGCAAAAAATGAGGAG+AGG | + | chr4_2:5580066-5580085 | Msa0585060:CDS | 45.0% | |
| TGCACAAATGGCAGCCAAAT+GGG | + | chr4_2:5580094-5580113 | Msa0585060:CDS | 45.0% | |
| TTCAGTAGACATTGCTACGG+AGG | + | chr4_2:5580432-5580451 | Msa0585060:intron | 45.0% | |
| TTGGTTTCTCCGGTTGTTAG+TGG | - | chr4_2:5580544-5580563 | None:intergenic | 45.0% | |
| !! | CCTCTTGAGAGCATCTTCAT+TGG | - | chr4_2:5580563-5580582 | None:intergenic | 45.0% |
| CCAATGAAGATGCTCTCAAG+AGG | + | chr4_2:5580560-5580579 | Msa0585060:CDS | 45.0% | |
| TCTTGCCTCTACTTGTGTGT+GGG | - | chr4_2:5580745-5580764 | None:intergenic | 45.0% | |
| TTCTTGCCTCTACTTGTGTG+TGG | - | chr4_2:5580746-5580765 | None:intergenic | 45.0% | |
| !! | TTCAAATAATAAAATAATAT+TGG | - | chr4_2:5578184-5578203 | None:intergenic | 5.0% |
| !! | ATTATTTAATTAATAATTGA+AGG | + | chr4_2:5579900-5579919 | Msa0585060:intron | 5.0% |
| !! | CATAAAAAAAAAAAAAAAAA+AGG | - | chr4_2:5580274-5580293 | None:intergenic | 5.0% |
| !!! | CTTTTTTTTTTTTTTTTTTA+TGG | + | chr4_2:5580272-5580291 | Msa0585060:intron | 5.0% |
| TTTGGCTGGTGTGGAATGAG+CGG | - | chr4_2:5576690-5576709 | None:intergenic | 50.0% | |
| AACTCCAGACACACCAATCC+AGG | + | chr4_2:5576810-5576829 | Msa0585060:intron | 50.0% | |
| !! | AGATCCTGGATTGGTGTGTC+TGG | - | chr4_2:5576817-5576836 | None:intergenic | 50.0% |
| AACTCAACCTCCAAAGGCGA+GGG | - | chr4_2:5576948-5576967 | None:intergenic | 50.0% | |
| AAACTCAACCTCCAAAGGCG+AGG | - | chr4_2:5576949-5576968 | None:intergenic | 50.0% | |
| TGAAGGTCTCCATTGTTGCG+TGG | - | chr4_2:5576999-5577018 | None:intergenic | 50.0% | |
| GAACCTGCTTATGCCAGACA+AGG | + | chr4_2:5577022-5577041 | Msa0585060:intron | 50.0% | |
| TCTGCTGCATCGTCATGAAG+AGG | + | chr4_2:5577048-5577067 | Msa0585060:intron | 50.0% | |
| CTGCTGCATCGTCATGAAGA+GGG | + | chr4_2:5577049-5577068 | Msa0585060:intron | 50.0% | |
| TGCTGCATCGTCATGAAGAG+GGG | + | chr4_2:5577050-5577069 | Msa0585060:intron | 50.0% | |
| CATGACGGTTACACCGTTAG+AGG | - | chr4_2:5577102-5577121 | None:intergenic | 50.0% | |
| ! | TGTTTCTGACAGGTGGCAGT+GGG | - | chr4_2:5577136-5577155 | None:intergenic | 50.0% |
| ! | ATGTTTCTGACAGGTGGCAG+TGG | - | chr4_2:5577137-5577156 | None:intergenic | 50.0% |
| GAGTTGGAGGAGAAGGTTGT+GGG | - | chr4_2:5577223-5577242 | None:intergenic | 50.0% | |
| AGAGATGTGTGCGCTTGGTT+GGG | - | chr4_2:5577265-5577284 | None:intergenic | 50.0% | |
| CGAGCGAACCTCCTACATAA+AGG | + | chr4_2:5577324-5577343 | Msa0585060:intron | 50.0% | |
| !! | TAGGAGAGATTGATGGTGGC+TGG | - | chr4_2:5577428-5577447 | None:intergenic | 50.0% |
| GGAGTAGGAGAGATTGATGG+TGG | - | chr4_2:5577432-5577451 | None:intergenic | 50.0% | |
| GAGATAGCGAGGATTAGGGA+TGG | - | chr4_2:5577453-5577472 | None:intergenic | 50.0% | |
| GAGGGAGATAGCGAGGATTA+GGG | - | chr4_2:5577457-5577476 | None:intergenic | 50.0% | |
| GAGTGTTTCACCTTGGTGGA+GGG | - | chr4_2:5577475-5577494 | None:intergenic | 50.0% | |
| TCCACCAAGGTGAAACACTC+CGG | + | chr4_2:5577475-5577494 | Msa0585060:intron | 50.0% | |
| ! | GGATGTTGGTGGATAGAGGT+GGG | - | chr4_2:5577563-5577582 | None:intergenic | 50.0% |
| ! | AGGATGTTGGTGGATAGAGG+TGG | - | chr4_2:5577564-5577583 | None:intergenic | 50.0% |
| ! | TGGAGGATGTTGGTGGATAG+AGG | - | chr4_2:5577567-5577586 | None:intergenic | 50.0% |
| ! | ATGGTGTTGGAGGATGTTGG+TGG | - | chr4_2:5577574-5577593 | None:intergenic | 50.0% |
| ! | AAAGGAGTGTGGAGGTTTGG+GGG | - | chr4_2:5577637-5577656 | None:intergenic | 50.0% |
| GTTGATCTGTGTGCAGGAGT+TGG | + | chr4_2:5578221-5578240 | Msa0585060:intron | 50.0% | |
| ATCTGTGTGCAGGAGTTGGA+TGG | + | chr4_2:5578225-5578244 | Msa0585060:intron | 50.0% | |
| GCTTCAGAGATCCCCTTGTT+TGG | + | chr4_2:5579127-5579146 | Msa0585060:intron | 50.0% | |
| GGAGAGGTTCACTGCACAAA+TGG | + | chr4_2:5580082-5580101 | Msa0585060:CDS | 50.0% | |
| CTGCACAAATGGCAGCCAAA+TGG | + | chr4_2:5580093-5580112 | Msa0585060:CDS | 50.0% | |
| GCACAAATGGCAGCCAAATG+GGG | + | chr4_2:5580095-5580114 | Msa0585060:CDS | 50.0% | |
| AGTCGAATTCGGTACCTCAG+AGG | + | chr4_2:5580302-5580321 | Msa0585060:intron | 50.0% | |
| AGATCCCCACACACAAGTAG+AGG | + | chr4_2:5580737-5580756 | Msa0585060:CDS | 50.0% | |
| CTTGCCTCTACTTGTGTGTG+GGG | - | chr4_2:5580744-5580763 | None:intergenic | 50.0% | |
| CAAGTAGAGGCAAGAAAGCC+CGG | + | chr4_2:5580750-5580769 | Msa0585060:CDS | 50.0% | |
| GCCCCCTACTTATGGGAACT+TGG | + | chr4_2:5575772-5575791 | Msa0585060:CDS | 55.0% | |
| CCAAAGGCGAGGGATTGTTC+AGG | - | chr4_2:5576938-5576957 | None:intergenic | 55.0% | |
| CCTGAACAATCCCTCGCCTT+TGG | + | chr4_2:5576935-5576954 | Msa0585060:intron | 55.0% | |
| GAACAATCCCTCGCCTTTGG+AGG | + | chr4_2:5576938-5576957 | Msa0585060:intron | 55.0% | |
| ! | CGTGGCGTTTGCTGAAAGAC+AGG | - | chr4_2:5576981-5577000 | None:intergenic | 55.0% |
| CAGCAAACGCCACGCAACAA+TGG | + | chr4_2:5576987-5577006 | Msa0585060:intron | 55.0% | |
| GCACCTTGTCTGGCATAAGC+AGG | - | chr4_2:5577028-5577047 | None:intergenic | 55.0% | |
| ! | ATGCAGCAGAGCACCTTGTC+TGG | - | chr4_2:5577038-5577057 | None:intergenic | 55.0% |
| GTGGGAGGAAGACATGGTAG+AGG | - | chr4_2:5577199-5577218 | None:intergenic | 55.0% | |
| GAGGAGAAGGTTGTGGGTGT+GGG | - | chr4_2:5577217-5577236 | None:intergenic | 55.0% | |
| GGAGTTGGAGGAGAAGGTTG+TGG | - | chr4_2:5577224-5577243 | None:intergenic | 55.0% | |
| AGGCTTGGAGTTGGAGGAGA+AGG | - | chr4_2:5577230-5577249 | None:intergenic | 55.0% | |
| TTGGAGGAGAGGCTTGGAGT+TGG | - | chr4_2:5577239-5577258 | None:intergenic | 55.0% | |
| CAGAGATGTGTGCGCTTGGT+TGG | - | chr4_2:5577266-5577285 | None:intergenic | 55.0% | |
| GCGAGGATTAGGGATGGAGT+AGG | - | chr4_2:5577447-5577466 | None:intergenic | 55.0% | |
| GGAGGGAGATAGCGAGGATT+AGG | - | chr4_2:5577458-5577477 | None:intergenic | 55.0% | |
| ! | GGAGTGTTTCACCTTGGTGG+AGG | - | chr4_2:5577476-5577495 | None:intergenic | 55.0% |
| AGGCAGGAAGGTTGGAGGTA+GGG | - | chr4_2:5577503-5577522 | None:intergenic | 55.0% | |
| GATATGGTGTGGAGGCAGGA+AGG | - | chr4_2:5577515-5577534 | None:intergenic | 55.0% | |
| ATTGGCGGCGAGATATGGTG+TGG | - | chr4_2:5577526-5577545 | None:intergenic | 55.0% | |
| !! | AGGGTATTGGCGGCGAGATA+TGG | - | chr4_2:5577531-5577550 | None:intergenic | 55.0% |
| ! | TGGTGGATAGAGGTGGGTTC+TGG | - | chr4_2:5577557-5577576 | None:intergenic | 55.0% |
| AGTGTGGAGGTTTGGGGGTT+AGG | - | chr4_2:5577632-5577651 | None:intergenic | 55.0% | |
| AATAGAGCCCCAAGCAACCC+AGG | + | chr4_2:5577665-5577684 | Msa0585060:intron | 55.0% | |
| ! | AAGAGCGTAGACAGGAAGCG+AGG | + | chr4_2:5577782-5577801 | Msa0585060:intron | 55.0% |
| TGACAGGTGGCAGTGGGATC+CGG | - | chr4_2:5577130-5577149 | None:intergenic | 60.0% | |
| GTGGGTGTGGGAGGAAGACA+TGG | - | chr4_2:5577205-5577224 | None:intergenic | 60.0% | |
| GAGAAGGTTGTGGGTGTGGG+AGG | - | chr4_2:5577214-5577233 | None:intergenic | 60.0% | |
| GGAGGAGAAGGTTGTGGGTG+TGG | - | chr4_2:5577218-5577237 | None:intergenic | 60.0% | |
| GAGGAGAGGCTTGGAGTTGG+AGG | - | chr4_2:5577236-5577255 | None:intergenic | 60.0% | |
| TGGTTGGGAGGTTGGAGGAG+AGG | - | chr4_2:5577250-5577269 | None:intergenic | 60.0% | |
| TGTGCGCTTGGTTGGGAGGT+TGG | - | chr4_2:5577258-5577277 | None:intergenic | 60.0% | |
| GATGTGTGCGCTTGGTTGGG+AGG | - | chr4_2:5577262-5577281 | None:intergenic | 60.0% | |
| GTGGCAGAGATGTGTGCGCT+TGG | - | chr4_2:5577270-5577289 | None:intergenic | 60.0% | |
| CTTGGTGGAGGGAGATAGCG+AGG | - | chr4_2:5577464-5577483 | None:intergenic | 60.0% | |
| CTCGCTATCTCCCTCCACCA+AGG | + | chr4_2:5577462-5577481 | Msa0585060:intron | 60.0% | |
| ! | GCCGGAGTGTTTCACCTTGG+TGG | - | chr4_2:5577479-5577498 | None:intergenic | 60.0% |
| GCAGGAAGGTTGGAGGTAGG+GGG | - | chr4_2:5577501-5577520 | None:intergenic | 60.0% | |
| GGCAGGAAGGTTGGAGGTAG+GGG | - | chr4_2:5577502-5577521 | None:intergenic | 60.0% | |
| GAGGCAGGAAGGTTGGAGGT+AGG | - | chr4_2:5577504-5577523 | None:intergenic | 60.0% | |
| TGTGGAGGCAGGAAGGTTGG+AGG | - | chr4_2:5577508-5577527 | None:intergenic | 60.0% | |
| TGGTGTGGAGGCAGGAAGGT+TGG | - | chr4_2:5577511-5577530 | None:intergenic | 60.0% | |
| GCGAGATATGGTGTGGAGGC+AGG | - | chr4_2:5577519-5577538 | None:intergenic | 60.0% | |
| GGGGTGGGAGTGAGGATAAC+AGG | - | chr4_2:5577698-5577717 | None:intergenic | 60.0% | |
| CGTAGACAGGAAGCGAGGTC+AGG | + | chr4_2:5577787-5577806 | Msa0585060:intron | 60.0% | |
| GCGAGGTCAGGACAGACTTG+AGG | + | chr4_2:5577799-5577818 | Msa0585060:intron | 60.0% | |
| GGGAGGTTGGAGGAGAGGCT+TGG | - | chr4_2:5577245-5577264 | None:intergenic | 65.0% | |
| GCGCTTGGTTGGGAGGTTGG+AGG | - | chr4_2:5577255-5577274 | None:intergenic | 65.0% | |
| ! | GGGGCCGGAGTGTTTCACCT+TGG | - | chr4_2:5577482-5577501 | None:intergenic | 65.0% |
| GAAGGTTGGAGGTAGGGGGC+CGG | - | chr4_2:5577497-5577516 | None:intergenic | 65.0% | |
| GGCGGCGAGATATGGTGTGG+AGG | - | chr4_2:5577523-5577542 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 5575599 | 5580921 | 5575599 | ID=Msa0585060;Name=Msa0585060 |
| chr4_2 | mRNA | 5575599 | 5580921 | 5575599 | ID=Msa0585060-mRNA-1;Parent=Msa0585060;Name=Msa0585060-mRNA-1;_AED=0.10;_eAED=0.10;_QI=135|0.83|0.71|1|1|1|7|134|382 |
| chr4_2 | exon | 5575599 | 5575877 | 5575599 | ID=Msa0585060-mRNA-1:exon:1329;Parent=Msa0585060-mRNA-1 |
| chr4_2 | exon | 5578237 | 5578418 | 5578237 | ID=Msa0585060-mRNA-1:exon:1330;Parent=Msa0585060-mRNA-1 |
| chr4_2 | exon | 5578563 | 5578752 | 5578563 | ID=Msa0585060-mRNA-1:exon:1331;Parent=Msa0585060-mRNA-1 |
| chr4_2 | exon | 5579128 | 5579292 | 5579128 | ID=Msa0585060-mRNA-1:exon:1332;Parent=Msa0585060-mRNA-1 |
| chr4_2 | exon | 5579954 | 5580182 | 5579954 | ID=Msa0585060-mRNA-1:exon:1333;Parent=Msa0585060-mRNA-1 |
| chr4_2 | exon | 5580437 | 5580581 | 5580437 | ID=Msa0585060-mRNA-1:exon:1334;Parent=Msa0585060-mRNA-1 |
| chr4_2 | exon | 5580694 | 5580921 | 5580694 | ID=Msa0585060-mRNA-1:exon:1335;Parent=Msa0585060-mRNA-1 |
| chr4_2 | five_prime_UTR | 5575599 | 5575733 | 5575599 | ID=Msa0585060-mRNA-1:five_prime_utr;Parent=Msa0585060-mRNA-1 |
| chr4_2 | CDS | 5575734 | 5575877 | 5575734 | ID=Msa0585060-mRNA-1:cds;Parent=Msa0585060-mRNA-1 |
| chr4_2 | CDS | 5578237 | 5578418 | 5578237 | ID=Msa0585060-mRNA-1:cds;Parent=Msa0585060-mRNA-1 |
| chr4_2 | CDS | 5578563 | 5578752 | 5578563 | ID=Msa0585060-mRNA-1:cds;Parent=Msa0585060-mRNA-1 |
| chr4_2 | CDS | 5579128 | 5579292 | 5579128 | ID=Msa0585060-mRNA-1:cds;Parent=Msa0585060-mRNA-1 |
| chr4_2 | CDS | 5579954 | 5580182 | 5579954 | ID=Msa0585060-mRNA-1:cds;Parent=Msa0585060-mRNA-1 |
| chr4_2 | CDS | 5580437 | 5580581 | 5580437 | ID=Msa0585060-mRNA-1:cds;Parent=Msa0585060-mRNA-1 |
| chr4_2 | CDS | 5580694 | 5580787 | 5580694 | ID=Msa0585060-mRNA-1:cds;Parent=Msa0585060-mRNA-1 |
| chr4_2 | three_prime_UTR | 5580788 | 5580921 | 5580788 | ID=Msa0585060-mRNA-1:three_prime_utr;Parent=Msa0585060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
