AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0580840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0580840 MtrunA17_Chr4g0060271 95.948 617 20 2 1 616 1 613 0.0 1069
Msa0580840 MtrunA17_Chr7g0216891 40.071 564 263 19 68 599 38 558 2.38e-95 304
Msa0580840 MtrunA17_Chr2g0322391 34.711 484 217 18 59 527 157 556 3.60e-56 200
Msa0580840 MtrunA17_Chr3g0099641 36.158 354 152 9 64 402 87 381 3.72e-52 186
Msa0580840 MtrunA17_Chr4g0051181 35.940 537 260 22 1 526 10 473 3.96e-51 184
Msa0580840 MtrunA17_Chr2g0288871 35.417 480 196 16 70 527 143 530 3.04e-49 180
Msa0580840 MtrunA17_Chr4g0075201 37.798 336 154 8 70 405 120 400 6.74e-49 177
Msa0580840 MtrunA17_Chr7g0270831 71.845 103 29 0 233 335 190 292 3.63e-47 171
Msa0580840 MtrunA17_Chr2g0302391 49.143 175 77 3 225 399 181 343 1.96e-43 161
Msa0580840 MtrunA17_Chr4g0025061 51.948 154 61 3 244 397 345 485 8.62e-42 160
Msa0580840 MtrunA17_Chr4g0025051 63.810 105 38 0 244 348 320 424 1.34e-40 156
Msa0580840 MtrunA17_Chr4g0024391 28.485 495 239 15 82 527 12 440 2.57e-37 145
Msa0580840 MtrunA17_Chr4g0001361 48.214 112 53 3 242 351 143 251 3.93e-25 106
Msa0580840 MtrunA17_Chr1g0150281 50.000 94 47 0 242 335 123 216 1.07e-24 104
Msa0580840 MtrunA17_Chr1g0150271 45.918 98 51 1 240 335 80 177 1.20e-24 103
Msa0580840 MtrunA17_Chr3g0136961 63.333 60 22 0 258 317 137 196 2.55e-24 103
Msa0580840 MtrunA17_Chr5g0432161 45.133 113 54 3 213 321 374 482 4.23e-24 107
Msa0580840 MtrunA17_Chr3g0106491 52.564 78 36 1 242 319 348 424 1.42e-23 104
Msa0580840 MtrunA17_Chr3g0106491 49.206 63 30 2 259 321 198 258 3.50e-13 72.4
Msa0580840 MtrunA17_Chr5g0445311 34.637 179 99 4 157 335 279 439 8.18e-23 102
Msa0580840 MtrunA17_Chr5g0445311 50.820 61 28 2 259 319 200 258 1.29e-11 67.4
Msa0580840 MtrunA17_Chr4g0004911 50.633 79 38 1 242 320 319 396 1.02e-22 102
Msa0580840 MtrunA17_Chr4g0004911 48.333 60 30 1 260 319 185 243 7.42e-13 71.2
Msa0580840 MtrunA17_Chr7g0243891 52.564 78 36 1 242 319 357 433 1.70e-22 101
Msa0580840 MtrunA17_Chr7g0243891 51.613 62 28 2 260 321 217 276 4.78e-12 68.9
Msa0580840 MtrunA17_Chr3g0101131 51.899 79 37 1 241 319 397 474 3.35e-22 100
Msa0580840 MtrunA17_Chr3g0101131 49.180 61 29 2 259 319 243 301 2.06e-11 67.0
Msa0580840 MtrunA17_Chr5g0418191 36.842 171 101 3 182 350 245 410 3.43e-22 99.8
Msa0580840 MtrunA17_Chr5g0418191 50.746 67 30 3 253 319 146 209 1.24e-13 73.6
Msa0580840 MtrunA17_Chr2g0333851 43.478 92 41 1 239 319 138 229 3.52e-22 97.8
Msa0580840 MtrunA17_Chr7g0218081 42.478 113 60 2 226 334 373 484 5.63e-22 99.8
Msa0580840 MtrunA17_Chr7g0218081 42.222 90 49 3 230 319 200 286 3.54e-12 69.3
Msa0580840 MtrunA17_Chr3g0079691 46.392 97 47 2 227 319 459 554 8.54e-22 100
Msa0580840 MtrunA17_Chr3g0079691 39.000 100 56 4 220 319 244 338 2.78e-12 69.7
Msa0580840 MtrunA17_Chr4g0042831 50.000 80 39 1 244 323 263 341 2.36e-21 96.7
Msa0580840 MtrunA17_Chr4g0042831 30.909 165 101 5 259 421 145 298 6.51e-12 67.8
Msa0580840 MtrunA17_Chr7g0263531 50.649 77 37 1 247 323 349 424 2.54e-21 97.1
Msa0580840 MtrunA17_Chr7g0263531 45.679 81 41 3 254 334 185 262 1.61e-13 73.2
Msa0580840 MtrunA17_Chr7g0249311 50.000 78 38 1 242 319 375 451 3.43e-21 98.2
Msa0580840 MtrunA17_Chr7g0249311 48.485 66 32 2 257 322 177 240 2.98e-11 66.6
Msa0580840 MtrunA17_Chr7g0249301 52.703 74 34 1 246 319 279 351 5.09e-21 95.5
Msa0580840 MtrunA17_Chr7g0249301 49.206 63 30 2 257 319 60 120 2.98e-11 65.5
Msa0580840 MtrunA17_Chr1g0194481 40.000 125 69 4 226 348 128 248 1.17e-20 93.6
Msa0580840 MtrunA17_Chr7g0270191 39.167 120 60 3 226 337 104 218 2.01e-20 92.0
Msa0580840 MtrunA17_Chr4g0074001 51.250 80 38 1 241 320 341 419 4.39e-20 94.0
Msa0580840 MtrunA17_Chr5g0419241 77.778 45 10 0 243 287 61 105 5.54e-20 85.5
Msa0580840 MtrunA17_Chr8g0335811 46.988 83 43 1 235 317 130 211 7.71e-20 89.0
Msa0580840 MtrunA17_Chr4g0051881 39.423 104 62 1 246 349 165 267 8.03e-20 91.3
Msa0580840 MtrunA17_Chr5g0447701 45.882 85 45 1 244 328 237 320 1.61e-19 91.3
Msa0580840 MtrunA17_Chr2g0294231 48.052 77 39 1 243 319 187 262 3.42e-19 90.1
Msa0580840 MtrunA17_Chr3g0129361 47.368 76 39 1 242 317 127 201 4.12e-19 86.7
Msa0580840 MtrunA17_Chr4g0068541 47.436 78 40 1 243 320 192 268 7.58e-19 89.4
Msa0580840 MtrunA17_Chr1g0150801 49.315 73 36 1 244 316 87 158 9.19e-19 84.0
Msa0580840 MtrunA17_Chr5g0401821 55.224 67 28 1 254 320 196 260 1.94e-18 85.9
Msa0580840 MtrunA17_Chr5g0443131 48.649 74 37 1 246 319 144 216 2.32e-18 86.3
Msa0580840 MtrunA17_Chr4g0053281 57.627 59 25 0 260 318 267 325 2.69e-18 86.7
Msa0580840 MtrunA17_Chr8g0379461 55.385 65 29 0 259 323 76 140 2.91e-18 84.7
Msa0580840 MtrunA17_Chr5g0418781 38.462 117 64 3 221 336 92 201 3.08e-18 85.5
Msa0580840 MtrunA17_Chr1g0188941 43.590 78 43 1 242 319 34 110 3.41e-18 80.9
Msa0580840 MtrunA17_Chr7g0270051 52.703 74 32 1 259 332 53 123 3.86e-18 84.7
Msa0580840 MtrunA17_Chr7g0224801 48.571 70 35 1 249 318 83 151 6.32e-18 81.6
Msa0580840 MtrunA17_Chr8g0383351 46.753 77 39 2 242 317 142 217 1.23e-17 82.8
Msa0580840 MtrunA17_Chr8g0383251 42.857 77 43 1 246 322 95 170 1.31e-17 81.3
Msa0580840 MtrunA17_Chr2g0319961 49.367 79 40 0 250 328 71 149 1.35e-17 83.2
Msa0580840 MtrunA17_Chr2g0289181 41.818 110 53 3 247 347 4 111 3.95e-17 81.3
Msa0580840 MtrunA17_Chr3g0129321 46.753 77 40 1 246 322 105 180 4.74e-17 80.1
Msa0580840 MtrunA17_Chr7g0228941 48.571 70 33 2 248 316 42 109 9.22e-17 77.0
Msa0580840 MtrunA17_Chr1g0184691 53.448 58 27 0 260 317 294 351 9.60e-17 82.4
Msa0580840 MtrunA17_Chr1g0147881 52.542 59 28 0 260 318 263 321 1.05e-16 82.0
Msa0580840 MtrunA17_Chr2g0284321 53.333 60 28 0 260 319 36 95 1.35e-16 79.3
Msa0580840 MtrunA17_Chr8g0386241 34.615 104 64 2 225 325 66 168 1.73e-16 77.8
Msa0580840 MtrunA17_Chr7g0248721 49.333 75 36 2 242 316 124 196 3.15e-16 78.2
Msa0580840 MtrunA17_Chr3g0139021 40.870 115 48 4 220 316 259 371 4.19e-16 80.9
Msa0580840 MtrunA17_Chr2g0293481 46.667 75 40 0 260 334 268 342 5.31e-16 81.3
Msa0580840 MtrunA17_Chr6g0485431 47.368 76 38 2 246 320 141 215 1.30e-15 79.0
Msa0580840 MtrunA17_Chr7g0238921 58.621 58 23 1 259 316 124 180 4.24e-15 76.6
Msa0580840 MtrunA17_Chr8g0348311 47.887 71 37 0 259 329 155 225 7.15e-15 76.3
Msa0580840 MtrunA17_Chr4g0071521 50.000 64 30 1 254 317 242 303 8.00e-15 75.9
Msa0580840 MtrunA17_Chr7g0248691 39.560 91 52 1 242 329 134 224 1.36e-14 75.5
Msa0580840 MtrunA17_Chr8g0387501 42.466 73 42 0 257 329 127 199 5.52e-14 72.8
Msa0580840 MtrunA17_Chr5g0432071 42.308 78 43 2 259 336 104 179 5.81e-14 71.2
Msa0580840 MtrunA17_Chr1g0202461 35.455 110 66 2 225 329 222 331 1.14e-13 73.2
Msa0580840 MtrunA17_Chr1g0189391 38.298 94 54 3 227 317 63 155 1.24e-12 69.3
Msa0580840 MtrunA17_Chr8g0387981 35.172 145 73 5 179 314 57 189 1.29e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0580840 AT5G15130.1 43.002 493 197 17 63 527 28 464 9.01e-89 286
Msa0580840 AT5G15130.2 43.096 478 188 18 78 527 1 422 4.33e-85 275
Msa0580840 AT1G18860.1 38.421 570 235 19 7 527 8 510 2.26e-79 261
Msa0580840 AT1G69810.1 38.788 330 168 9 68 394 23 321 2.86e-57 198
Msa0580840 AT1G68150.1 81.633 98 18 0 243 340 219 316 4.63e-53 186
Msa0580840 AT4G04450.2 37.921 356 152 12 67 394 8 322 8.83e-53 187
Msa0580840 AT4G04450.1 38.202 356 151 12 67 394 102 416 7.67e-52 187
Msa0580840 AT1G62300.1 31.979 566 271 19 5 544 76 553 9.22e-47 173
Msa0580840 AT1G69810.2 38.776 294 146 9 104 394 1 263 4.10e-46 166
Msa0580840 AT4G01720.1 77.778 81 18 0 239 319 219 299 2.30e-39 151
Msa0580840 AT4G31800.2 54.321 81 37 0 257 337 109 189 2.70e-26 108
Msa0580840 AT4G31800.1 54.321 81 37 0 257 337 174 254 4.66e-26 109
Msa0580840 AT2G25000.2 65.079 63 22 0 257 319 101 163 9.39e-25 103
Msa0580840 AT2G25000.4 65.079 63 22 0 257 319 101 163 9.39e-25 103
Msa0580840 AT2G25000.3 65.079 63 22 0 257 319 123 185 1.62e-24 103
Msa0580840 AT2G25000.1 65.079 63 22 0 257 319 144 206 1.82e-24 103
Msa0580840 AT1G80840.1 61.538 65 25 0 255 319 142 206 2.84e-24 103
Msa0580840 AT2G38470.1 37.903 124 76 1 208 331 311 433 1.72e-23 105
Msa0580840 AT2G38470.1 51.667 60 27 2 260 319 185 242 1.03e-12 71.2
Msa0580840 AT1G29860.1 36.364 154 85 4 243 396 120 260 2.02e-23 101
Msa0580840 AT5G56270.1 54.545 77 34 1 243 319 471 546 4.05e-23 104
Msa0580840 AT5G56270.1 51.667 60 27 2 260 319 274 331 8.96e-12 68.6
Msa0580840 AT4G26640.5 44.898 98 53 1 227 324 173 269 5.44e-23 101
Msa0580840 AT4G26640.5 39.773 88 49 3 251 336 25 110 1.17e-11 67.4
Msa0580840 AT4G26640.6 44.898 98 53 1 227 324 173 269 5.44e-23 101
Msa0580840 AT4G26640.6 39.773 88 49 3 251 336 25 110 1.17e-11 67.4
Msa0580840 AT4G26640.4 44.898 98 53 1 227 324 173 269 5.44e-23 101
Msa0580840 AT4G26640.4 39.773 88 49 3 251 336 25 110 1.17e-11 67.4
Msa0580840 AT4G26640.3 44.898 98 53 1 227 324 173 269 5.44e-23 101
Msa0580840 AT4G26640.3 39.773 88 49 3 251 336 25 110 1.17e-11 67.4
Msa0580840 AT4G26640.7 44.898 98 53 1 227 324 309 405 1.18e-22 102
Msa0580840 AT4G26640.7 46.479 71 34 3 251 319 161 229 1.67e-11 67.4
Msa0580840 AT4G26640.1 44.898 98 53 1 227 324 277 373 1.38e-22 102
Msa0580840 AT4G26640.1 46.479 71 34 3 251 319 129 197 1.75e-11 67.4
Msa0580840 AT4G26640.2 44.898 98 53 1 227 324 349 445 1.98e-22 102
Msa0580840 AT4G26640.2 46.479 71 34 3 251 319 201 269 1.98e-11 67.4
Msa0580840 AT2G03340.1 41.667 108 62 1 217 324 373 479 2.87e-22 101
Msa0580840 AT2G03340.1 50.746 67 30 3 253 319 245 308 4.20e-14 75.9
Msa0580840 AT4G30935.1 44.954 109 57 2 212 320 286 391 6.46e-22 99.8
Msa0580840 AT1G13960.1 44.792 96 46 2 230 319 374 468 8.71e-22 99.8
Msa0580840 AT1G13960.1 49.254 67 31 3 253 319 224 287 6.79e-13 72.0
Msa0580840 AT1G13960.2 52.703 74 34 1 246 319 243 315 1.53e-21 97.1
Msa0580840 AT1G13960.2 49.254 67 31 3 253 319 71 134 7.85e-13 70.9
Msa0580840 AT5G07100.2 51.282 78 37 1 242 319 124 200 1.54e-21 94.0
Msa0580840 AT5G07100.2 42.105 76 43 1 257 332 22 96 4.18e-12 66.6
Msa0580840 AT5G07100.4 51.282 78 37 1 242 319 124 200 1.54e-21 94.0
Msa0580840 AT5G07100.4 42.105 76 43 1 257 332 22 96 4.18e-12 66.6
Msa0580840 AT5G07100.5 51.282 78 37 1 242 319 124 200 1.54e-21 94.0
Msa0580840 AT5G07100.5 42.105 76 43 1 257 332 22 96 4.18e-12 66.6
Msa0580840 AT5G07100.3 51.282 78 37 1 242 319 124 200 1.54e-21 94.0
Msa0580840 AT5G07100.3 42.105 76 43 1 257 332 22 96 4.18e-12 66.6
Msa0580840 AT5G07100.1 51.282 78 37 1 242 319 217 293 2.20e-21 95.9
Msa0580840 AT5G07100.1 42.105 76 43 1 257 332 115 189 9.15e-12 67.0
Msa0580840 AT2G04880.2 52.000 75 35 1 245 319 269 342 3.02e-21 97.4
Msa0580840 AT2G04880.2 41.237 97 52 4 257 353 109 200 8.81e-13 71.2
Msa0580840 AT5G41570.1 43.299 97 54 1 220 316 59 154 3.33e-21 91.7
Msa0580840 AT5G26170.1 50.685 73 35 1 245 317 99 170 3.41e-21 91.7
Msa0580840 AT4G26440.1 35.000 180 100 5 207 386 323 485 3.57e-21 98.2
Msa0580840 AT4G26440.1 49.254 67 31 3 253 319 173 236 1.77e-11 67.4
Msa0580840 AT2G04880.1 52.000 75 35 1 245 319 293 366 5.04e-21 97.1
Msa0580840 AT2G04880.1 45.588 68 35 2 257 324 109 174 1.74e-12 70.5
Msa0580840 AT3G01080.2 51.351 74 35 1 246 319 331 403 2.36e-20 94.7
Msa0580840 AT3G01080.1 51.351 74 35 1 246 319 293 365 2.39e-20 94.4
Msa0580840 AT2G30250.1 42.857 98 52 2 225 319 291 387 2.77e-20 94.0
Msa0580840 AT2G47260.1 43.137 102 52 2 239 335 154 254 2.79e-20 92.8
Msa0580840 AT2G44745.1 44.186 86 47 1 231 316 117 201 2.90e-20 90.1
Msa0580840 AT5G49520.1 46.835 79 41 1 243 321 205 282 3.56e-20 93.6
Msa0580840 AT4G18170.1 36.090 133 78 3 222 354 141 266 6.29e-20 91.7
Msa0580840 AT5G46350.1 46.591 88 45 2 246 332 170 256 9.59e-20 91.3
Msa0580840 AT1G64000.1 52.113 71 33 1 246 316 101 170 3.34e-19 86.7
Msa0580840 AT5G28650.1 62.712 59 22 0 264 322 267 325 5.55e-19 89.0
Msa0580840 AT1G69310.4 42.574 101 51 2 216 316 110 203 7.04e-19 87.8
Msa0580840 AT1G69310.2 42.574 101 51 2 216 316 110 203 7.04e-19 87.8
Msa0580840 AT1G69310.1 42.574 101 51 2 216 316 110 203 7.04e-19 87.8
Msa0580840 AT5G13080.1 47.945 73 37 1 246 318 54 125 8.13e-19 84.0
Msa0580840 AT5G64810.1 45.000 80 43 1 237 316 88 166 1.19e-18 85.1
Msa0580840 AT4G24240.1 52.778 72 32 1 254 325 278 347 1.40e-18 88.2
Msa0580840 AT1G55600.1 44.872 78 42 1 242 319 290 366 1.56e-18 89.4
Msa0580840 AT3G04670.1 59.322 59 24 0 264 322 267 325 1.87e-18 87.4
Msa0580840 AT2G23320.1 59.322 59 24 0 260 318 241 299 2.85e-18 86.7
Msa0580840 AT1G29280.1 47.297 74 39 0 250 323 65 138 5.58e-18 84.7
Msa0580840 AT2G46130.1 51.351 74 35 1 243 316 14 86 6.23e-18 80.1
Msa0580840 AT4G39410.1 40.476 84 49 1 234 317 198 280 7.99e-18 85.1
Msa0580840 AT3G62340.1 48.193 83 42 1 238 320 97 178 8.46e-18 84.3
Msa0580840 AT2G30590.1 46.988 83 36 1 242 316 288 370 2.60e-17 84.7
Msa0580840 AT2G37260.2 56.923 65 27 1 257 321 265 328 3.30e-17 84.0
Msa0580840 AT2G37260.2 44.444 99 52 3 260 358 84 179 8.66e-17 82.8
Msa0580840 AT2G37260.3 56.923 65 27 1 257 321 267 330 3.40e-17 84.0
Msa0580840 AT2G37260.3 44.444 99 52 3 260 358 86 181 9.01e-17 82.8
Msa0580840 AT2G37260.1 56.923 65 27 1 257 321 347 410 7.18e-17 84.0
Msa0580840 AT2G37260.1 44.444 99 52 3 260 358 166 261 2.07e-16 82.4
Msa0580840 AT3G01970.1 47.297 74 38 1 245 318 51 123 9.70e-17 78.2
Msa0580840 AT4G31550.1 35.088 171 81 7 169 316 140 303 1.97e-16 81.3
Msa0580840 AT4G31550.2 46.154 78 35 2 239 316 232 302 3.14e-16 80.5
Msa0580840 AT2G24570.1 39.806 103 51 3 239 341 230 321 4.35e-16 80.1
Msa0580840 AT4G23550.1 44.156 77 43 0 258 334 139 215 2.91e-15 77.4
Msa0580840 AT1G30650.1 49.254 67 34 0 260 326 218 284 3.43e-15 78.6
Msa0580840 AT3G58710.2 52.308 65 31 0 259 323 70 134 4.39e-15 76.3
Msa0580840 AT3G58710.1 52.308 65 31 0 259 323 71 135 4.49e-15 76.3
Msa0580840 AT4G01250.1 46.479 71 38 0 259 329 128 198 5.31e-15 76.6
Msa0580840 AT2G34830.1 49.254 67 34 0 260 326 216 282 9.33e-15 77.4
Msa0580840 AT2G34830.2 49.254 67 34 0 260 326 225 291 1.13e-14 77.0
Msa0580840 AT4G31800.3 67.500 40 13 0 257 296 174 213 1.37e-14 74.3
Msa0580840 AT5G52830.1 48.571 70 36 0 260 329 166 235 3.09e-14 75.1
Msa0580840 AT1G69310.3 39.604 101 50 3 216 316 110 199 5.31e-14 73.2
Msa0580840 AT2G21900.1 45.161 62 33 1 258 319 108 168 8.10e-14 71.2
Msa0580840 AT2G46130.2 47.297 74 34 2 243 316 14 82 5.02e-13 66.2
Msa0580840 AT5G43290.1 51.724 58 27 1 259 316 114 170 5.24e-13 70.1
Msa0580840 AT5G24110.1 46.575 73 36 2 244 314 99 170 1.71e-12 68.9
Msa0580840 AT5G45050.4 34.483 116 74 1 211 326 995 1108 7.26e-12 69.3
Msa0580840 AT5G45050.2 34.483 116 74 1 211 326 1106 1219 8.02e-12 69.3
Msa0580840 AT5G45050.1 35.780 109 68 1 211 319 1134 1240 8.06e-12 69.3

Find 118 sgRNAs with CRISPR-Local

Find 596 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACTGGACTTGGAATATT+TGG 0.129902 4_1:+86108371 None:intergenic
CCATATATGGAGTGCAATTC+TGG 0.170613 4_1:-86110991 Msa0580840:exon
GCAGCACTTTCTTCACTTAT+TGG 0.177197 4_1:-86101976 Msa0580840:CDS
CAATGCATGGGATTTGATTC+AGG 0.243163 4_1:+86102240 None:intergenic
ATAAATAATCACCAATTAAT+TGG 0.256352 4_1:+86101690 None:intergenic
TCATCAAGTTCTAAAGTAAA+TGG 0.266329 4_1:-86101853 Msa0580840:CDS
CCAGAATTGCACTCCATATA+TGG 0.273439 4_1:+86110991 None:intergenic
GGAAATGCAATTTAACAATA+TGG 0.281542 4_1:-86108651 Msa0580840:CDS
ATTCTGCATTTATTTCTTCA+TGG 0.288137 4_1:+86108582 None:intergenic
TTGTTCCTATTATTACTATA+TGG 0.291383 4_1:+86102180 None:intergenic
GAAATGGGCTGAGATGTTTC+AGG 0.315609 4_1:-86101896 Msa0580840:CDS
CATTTCCAGTGCTCGGTATT+CGG 0.345477 4_1:+86108667 None:intergenic
CAAACCCTAGCTTTCTTTGC+AGG 0.346131 4_1:+86108236 None:intergenic
ACAACTTCATCATCCTTTGT+TGG 0.363180 4_1:+86108332 None:intergenic
ATCAACCATATAGTAATAAT+AGG 0.373148 4_1:-86102185 Msa0580840:CDS
TGAGACAACAAAAGCTCAAA+TGG 0.387526 4_1:-86108744 Msa0580840:CDS
GCTAAAGCTGATTGAAAAGT+TGG 0.388661 4_1:+86102000 None:intergenic
ATTTGAATCAGAAAATGAAA+TGG 0.398163 4_1:-86101912 Msa0580840:CDS
GTCTTATTGAGTGTCTTACT+TGG 0.404266 4_1:+86108296 None:intergenic
GGATGCCAATGGAGAAAGTA+TGG 0.406659 4_1:-86107902 Msa0580840:CDS
CTTATTGGAAACACTAATCA+AGG 0.409882 4_1:-86101961 Msa0580840:CDS
CCATTCTGTGTATTGTTCAC+TGG 0.411705 4_1:+86101799 None:intergenic
CAAACCAACAACAATCTTCA+TGG 0.413700 4_1:-86102480 Msa0580840:CDS
TTTGTCCATACTTTCTCCAT+TGG 0.414359 4_1:+86107897 None:intergenic
ATCATGTCCGGTTAGAAAAC+AGG 0.417854 4_1:-86107819 Msa0580840:intron
GGAAGAGTTGTCACTTGGAT+TGG 0.421095 4_1:-86108441 Msa0580840:CDS
CATCTGGTAGATAAAAGTTT+AGG 0.422150 4_1:+86102457 None:intergenic
AATCTAAGCACTTTAAACTT+TGG 0.426376 4_1:-86102153 Msa0580840:CDS
GATGATGTTGAAGAATTTGA+TGG 0.429432 4_1:+86102345 None:intergenic
CACAGTTGCACCATCATGTC+CGG 0.429469 4_1:-86107831 Msa0580840:CDS
AAGAAGGGTATCTTGGTAGT+TGG 0.437752 4_1:+86102283 None:intergenic
TTGTTGTTGGTTTGTGCTGA+TGG 0.452268 4_1:+86102489 None:intergenic
GGTTCATCAACCTCCAACTC+TGG 0.460772 4_1:-86102519 Msa0580840:CDS
CATATATGGAGTGCAATTCT+GGG 0.463692 4_1:-86110990 Msa0580840:exon
TTGGGCGAGGATATTGTGCT+TGG 0.464830 4_1:+86109017 None:intergenic
GCCGCATCGATGCTATTATC+AGG 0.467031 4_1:-86102540 Msa0580840:CDS
ATGATAGTGCAGGGTTGGAT+AGG 0.467366 4_1:+86102412 None:intergenic
AGAGTGGAAGAAGGGTATCT+TGG 0.467928 4_1:+86102276 None:intergenic
AAACTCCTGCAAAGAAAGCT+AGG 0.468281 4_1:-86108241 Msa0580840:CDS
GATCTTTCAGTATTAGCAAT+GGG 0.469342 4_1:+86109053 None:intergenic
TTTGAGGAGTAGCATAATTG+AGG 0.472126 4_1:+86102208 None:intergenic
TTTGAATCAGAAAATGAAAT+GGG 0.473732 4_1:-86101911 Msa0580840:CDS
CGATGCGGCCGCGGAAGTTG+TGG 0.478396 4_1:+86102554 None:intergenic
GATCTTGTTTCCCTCAGCCT+TGG 0.480636 4_1:-86108557 Msa0580840:CDS
GTGAGGTCAAGAGTGATAGT+TGG 0.491969 4_1:+86102375 None:intergenic
AACAAGGAAGAGTTGTCACT+TGG 0.493048 4_1:-86108446 Msa0580840:CDS
TTCTCAAAACAGATGAATGA+TGG 0.497069 4_1:-86107923 Msa0580840:intron
AAATTTGAAACATCAAAATC+AGG 0.497604 4_1:-86108413 Msa0580840:CDS
TAAATTGCATTTCCAGTGCT+CGG 0.498132 4_1:+86108660 None:intergenic
TCAGAACTATTCACTGGACT+TGG 0.498507 4_1:+86108362 None:intergenic
CTAAAGCTAAGAGTGGAAGA+AGG 0.503500 4_1:+86102267 None:intergenic
CGATAGTAAGCTCGAGGGCA+AGG 0.506033 4_1:+86107857 None:intergenic
TTCAAGTTTCTTGAACAAAA+CGG 0.507107 4_1:-86101824 Msa0580840:CDS
AGTTCTAAAGTAAATGGTTG+TGG 0.510261 4_1:-86101847 Msa0580840:CDS
TTTACTTTAGAACTTGATGA+AGG 0.512151 4_1:+86101856 None:intergenic
TAGGCCATGAAGATTGTTGT+TGG 0.513416 4_1:+86102476 None:intergenic
GAGTGCAATTCTGGGAGATC+TGG 0.518269 4_1:-86110982 Msa0580840:CDS
TTATTGAGTGTCTTACTTGG+TGG 0.519260 4_1:+86108299 None:intergenic
TTGAGATGATAGTGCAGGGT+TGG 0.519761 4_1:+86102407 None:intergenic
CTGAATCAAATCCCATGCAT+TGG 0.522577 4_1:-86102239 Msa0580840:CDS
GCCATGGCTGTTGCTGAAAG+TGG 0.522889 4_1:+86102579 None:intergenic
CGCGGAAGTTGTGGAAGCCA+TGG 0.523187 4_1:+86102563 None:intergenic
AAAAGTGCTTCTGCATCTCC+TGG 0.524615 4_1:-86101733 Msa0580840:CDS
AAGAGAAGTGAGCATAGTAC+TGG 0.527731 4_1:-86110931 Msa0580840:CDS
AATTTGATGGGTTTGAAGTG+AGG 0.528347 4_1:+86102358 None:intergenic
GGTGCAGAAAATGGCAAAGA+AGG 0.529278 4_1:+86101757 None:intergenic
CTTGAATTGAATCTAACAAA+GGG 0.532209 4_1:+86102321 None:intergenic
TAGGAACTCTTCCAAGGCTG+AGG 0.532985 4_1:+86108546 None:intergenic
ACAACTTCAGAACTATTCAC+TGG 0.533241 4_1:+86108356 None:intergenic
TCCACTTTCAGCAACAGCCA+TGG 0.540367 4_1:-86102580 Msa0580840:CDS
TCAAACATTTCACAACATGT+AGG 0.542220 4_1:-86102072 Msa0580840:CDS
TTCTGAAGTTGTTCCAACAA+AGG 0.546847 4_1:-86108345 Msa0580840:CDS
GGGAATCAAAATCAAAGTGC+AGG 0.547602 4_1:-86101940 Msa0580840:CDS
GAGACAACAAAAGCTCAAAT+GGG 0.551564 4_1:-86108743 Msa0580840:CDS
CCAGTGAACAATACACAGAA+TGG 0.554001 4_1:-86101799 Msa0580840:CDS
ACTGAAAGATCAATTGAGGC+TGG 0.554571 4_1:-86109041 Msa0580840:CDS
AAATCAGGTAGCACAACTGA+AGG 0.555466 4_1:-86108398 Msa0580840:CDS
TGATCTTTCAGTATTAGCAA+TGG 0.556800 4_1:+86109052 None:intergenic
GAGGAAGCTATTCCAATGCA+TGG 0.564369 4_1:+86102227 None:intergenic
ATGATGAAGTTGTAGAGACT+TGG 0.570390 4_1:-86108322 Msa0580840:CDS
AGGAAGCTATTCCAATGCAT+GGG 0.575316 4_1:+86102228 None:intergenic
TGGCTGTTGCTGAAAGTGGA+AGG 0.576476 4_1:+86102583 None:intergenic
AATGACCGAATACCGAGCAC+TGG 0.578776 4_1:-86108672 Msa0580840:CDS
AGGAGAACTAAAGCTAAGAG+TGG 0.580510 4_1:+86102260 None:intergenic
TGATGGAGATAGTGAACTCA+AGG 0.581059 4_1:-86110959 Msa0580840:CDS
TAAAGCTAAGAGTGGAAGAA+GGG 0.581456 4_1:+86102268 None:intergenic
ATGATGTTGAAGAATTTGAT+GGG 0.583175 4_1:+86102346 None:intergenic
TTGCTGAAAGTGGAAGGCTG+TGG 0.584244 4_1:+86102589 None:intergenic
TGTTACTAGGAACTCTTCCA+AGG 0.584869 4_1:+86108540 None:intergenic
TAATACTGAAAGATCAATTG+AGG 0.589489 4_1:-86109045 Msa0580840:CDS
AACAAAAGCTCAAATGGGTG+AGG 0.591231 4_1:-86108738 Msa0580840:CDS
TAATAGCATCGATGCGGCCG+CGG 0.591990 4_1:+86102545 None:intergenic
CATGGCTTCCACAACTTCCG+CGG 0.593483 4_1:-86102562 Msa0580840:CDS
AACTCCTGCAAAGAAAGCTA+GGG 0.594594 4_1:-86108240 Msa0580840:CDS
GAATGTTGAGATGATAGTGC+AGG 0.594784 4_1:+86102402 None:intergenic
GCTTGAATTGAATCTAACAA+AGG 0.596663 4_1:+86102320 None:intergenic
TGGCATTGAACCAGAGTTGG+AGG 0.598647 4_1:+86102509 None:intergenic
AGGAACTCTTCCAAGGCTGA+GGG 0.600114 4_1:+86108547 None:intergenic
TCAGGTACAAAGATGTGTTG+AGG 0.608124 4_1:-86102652 Msa0580840:intron
TAAGACAATGAGAGATGCTG+AGG 0.621356 4_1:-86108279 Msa0580840:CDS
AGGTGAGAAAAGAAAATCAA+CGG 0.624151 4_1:-86108718 Msa0580840:CDS
TGATGGCATTGAACCAGAGT+TGG 0.628021 4_1:+86102506 None:intergenic
TTCTAATCACAACATACGAA+GGG 0.629312 4_1:-86102620 Msa0580840:CDS
TAGACAAGTATTTACCGTTG+GGG 0.632603 4_1:+86108193 None:intergenic
CTTTGGTAGACAAAATACAA+TGG 0.632926 4_1:-86102136 Msa0580840:CDS
GTGCAACGATAGTAAGCTCG+AGG 0.633302 4_1:+86107851 None:intergenic
TTATTGGAAACACTAATCAA+GGG 0.641347 4_1:-86101960 Msa0580840:CDS
ATTCTAATCACAACATACGA+AGG 0.641504 4_1:-86102621 Msa0580840:CDS
AATCAGGTAGCACAACTGAA+GGG 0.644837 4_1:-86108397 Msa0580840:CDS
AGATGAATGATGGATGCCAA+TGG 0.647635 4_1:-86107913 Msa0580840:CDS
AGCAAGATGTGACACCCCAA+CGG 0.667652 4_1:-86108207 Msa0580840:intron
TTGTCACTATTATCACCACC+AGG 0.684962 4_1:+86101715 None:intergenic
TGCAACGATAGTAAGCTCGA+GGG 0.697067 4_1:+86107852 None:intergenic
AGTGCTTCTGCATCTCCTGG+TGG 0.699273 4_1:-86101730 Msa0580840:CDS
ACCTGATAATAGCATCGATG+CGG 0.704481 4_1:+86102539 None:intergenic
TAATGATGAAGAATTCAACA+AGG 0.709467 4_1:-86108462 Msa0580840:CDS
AATGTTGAGATGATAGTGCA+GGG 0.717220 4_1:+86102403 None:intergenic
AATTCTGGGAGATCTGGTGA+TGG 0.720675 4_1:-86110976 Msa0580840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATATTATATATAAAT+AGG - chr4_1:86102923-86102942 Msa0580840:intron 0.0%
!! AAATATATTATATATAAATA+GGG - chr4_1:86102924-86102943 Msa0580840:intron 0.0%
!! ATTGATATAATTAAACAAAA+AGG + chr4_1:86102087-86102106 None:intergenic 10.0%
!! TTGTTTAATTATATCAATAT+TGG - chr4_1:86102089-86102108 Msa0580840:CDS 10.0%
!! TTATTTAGTATAAACAATTT+AGG + chr4_1:86102643-86102662 None:intergenic 10.0%
!!! ATAAGTAGATTATTTTTTAT+TGG + chr4_1:86102868-86102887 None:intergenic 10.0%
!! AATCTACTTATATATAAAAA+AGG - chr4_1:86102877-86102896 Msa0580840:intron 10.0%
!! ATATATTATATATAAATAGG+GGG - chr4_1:86102926-86102945 Msa0580840:intron 10.0%
!! ACATTAAAAAAAATAAACTT+GGG + chr4_1:86103527-86103546 None:intergenic 10.0%
!! TACATTAAAAAAAATAAACT+TGG + chr4_1:86103528-86103547 None:intergenic 10.0%
!!! AGTTTATTTTTTTTAATGTA+AGG - chr4_1:86103528-86103547 Msa0580840:intron 10.0%
!!! ATATTGAGTTTAATTTTATA+TGG - chr4_1:86103860-86103879 Msa0580840:intron 10.0%
!! CAAAATCATTTATAAAAGTT+TGG + chr4_1:86102043-86102062 None:intergenic 15.0%
!!! GTGAATTATGATTTTTTTTA+AGG + chr4_1:86102262-86102281 None:intergenic 15.0%
!!! TTAATTTTGTTTTATATCAC+TGG - chr4_1:86102606-86102625 Msa0580840:CDS 15.0%
!!! ATTTGTGGTATATATTTTTA+TGG + chr4_1:86102679-86102698 None:intergenic 15.0%
!!! GATGATTTTTTTTTTTTGAA+TGG - chr4_1:86102899-86102918 Msa0580840:intron 15.0%
!! ATTAAAAAAAATAAACTTGG+GGG + chr4_1:86103525-86103544 None:intergenic 15.0%
!! CATTAAAAAAAATAAACTTG+GGG + chr4_1:86103526-86103545 None:intergenic 15.0%
!!! ATTTTTCACTTTATTTATCA+TGG + chr4_1:86103583-86103602 None:intergenic 15.0%
!! GATAAATAAAGTGAAAAATA+AGG - chr4_1:86103584-86103603 Msa0580840:intron 15.0%
!!! AAATTAACCTTATCATTTTT+GGG + chr4_1:86103744-86103763 None:intergenic 15.0%
!!! AAAATTAACCTTATCATTTT+TGG + chr4_1:86103745-86103764 None:intergenic 15.0%
!!! AATATATGCGTAAATTTTTT+AGG + chr4_1:86104971-86104990 None:intergenic 15.0%
!! ATATAATGTGAAATATGATA+AGG + chr4_1:86108156-86108175 None:intergenic 15.0%
!! ATATATATTATGAAACACAA+TGG + chr4_1:86109970-86109989 None:intergenic 15.0%
!!! TTTTTCTCAATTTCCATATA+TGG - chr4_1:86101736-86101755 Msa0580840:CDS 20.0%
!! TGTGATTTAAAAGCTAAAAA+TGG + chr4_1:86101921-86101940 None:intergenic 20.0%
!! TTTCTTTCTCTCTATATATA+TGG - chr4_1:86101955-86101974 Msa0580840:CDS 20.0%
!!! AGATTTGATAGTCAAAATTA+AGG - chr4_1:86102009-86102028 Msa0580840:CDS 20.0%
!!! GATTTGATAGTCAAAATTAA+GGG - chr4_1:86102010-86102029 Msa0580840:CDS 20.0%
!!! GGATGATTTTTTTTTTTGAA+AGG + chr4_1:86102241-86102260 None:intergenic 20.0%
!! AATTATCATTGTAATTAACG+TGG - chr4_1:86102308-86102327 Msa0580840:CDS 20.0%
!! ATTATCATTGTAATTAACGT+GGG - chr4_1:86102309-86102328 Msa0580840:CDS 20.0%
!!! TTTTGGATAATAAAGGATAA+GGG + chr4_1:86102361-86102380 None:intergenic 20.0%
!!! ATTTTGGATAATAAAGGATA+AGG + chr4_1:86102362-86102381 None:intergenic 20.0%
!!! AAGTTGATTTTGGATAATAA+AGG + chr4_1:86102368-86102387 None:intergenic 20.0%
!!! AGACATTTTTAACAAGTTTA+AGG + chr4_1:86102784-86102803 None:intergenic 20.0%
!!! GGTGTATTTTTATTTTCTTT+TGG + chr4_1:86102972-86102991 None:intergenic 20.0%
!! ATTAAATTGAAAATAGACGT+CGG - chr4_1:86103094-86103113 Msa0580840:intron 20.0%
!! TCATCAAATGTGTATATTAA+TGG + chr4_1:86103271-86103290 None:intergenic 20.0%
!! TTAATTGACCAAATATGAAT+AGG - chr4_1:86103375-86103394 Msa0580840:intron 20.0%
!! TAATTGACCAAATATGAATA+GGG - chr4_1:86103376-86103395 Msa0580840:intron 20.0%
!! TTTCTAAATGACATAAGAAA+GGG + chr4_1:86103500-86103519 None:intergenic 20.0%
!! ATTTCTAAATGACATAAGAA+AGG + chr4_1:86103501-86103520 None:intergenic 20.0%
!!! TTTTTTTAATGTAAGGAACA+AGG - chr4_1:86103535-86103554 Msa0580840:intron 20.0%
!!! TGAGTTTAATTTTATATGGA+CGG - chr4_1:86103864-86103883 Msa0580840:intron 20.0%
!!! TTTTTTGGAATATTGTTACT+AGG + chr4_1:86104216-86104235 None:intergenic 20.0%
!!! AAATTTGAAACATCAAAATC+AGG - chr4_1:86104327-86104346 Msa0580840:intron 20.0%
!! ATCGAATTTGATATAAAATG+AGG + chr4_1:86104581-86104600 None:intergenic 20.0%
!!! ACTTCTCTATTTTAATCTAA+CGG + chr4_1:86104630-86104649 None:intergenic 20.0%
!!! AAGTTTTTCTCTTAATCTAA+TGG - chr4_1:86104694-86104713 Msa0580840:intron 20.0%
!!! AATAAACTTGTTTTCATCAA+TGG - chr4_1:86105549-86105568 Msa0580840:intron 20.0%
!! AATTAATAAGGTGTATTCAT+TGG - chr4_1:86106028-86106047 Msa0580840:intron 20.0%
!!! ACATTAGAAATTTTAAAGTG+TGG + chr4_1:86106701-86106720 None:intergenic 20.0%
!! TTTATGGATATATTACAATG+AGG + chr4_1:86106935-86106954 None:intergenic 20.0%
!!! AATTGATTCATTGTGATATT+TGG - chr4_1:86107179-86107198 Msa0580840:intron 20.0%
!!! ATTGATTCATTGTGATATTT+GGG - chr4_1:86107180-86107199 Msa0580840:intron 20.0%
!!! TCTAATCTTTTCAAAGTTTT+TGG - chr4_1:86107658-86107677 Msa0580840:intron 20.0%
!! ACCTTTCAAATTAAAGATTT+GGG - chr4_1:86108888-86108907 Msa0580840:intron 20.0%
!! AACACATAATTATGAATTTC+AGG - chr4_1:86110070-86110089 Msa0580840:intron 20.0%
!! ATCAACCATATAGTAATAAT+AGG - chr4_1:86110555-86110574 Msa0580840:intron 20.0%
!! TTGTTCCTATTATTACTATA+TGG + chr4_1:86110563-86110582 None:intergenic 20.0%
!! ATTTGAATCAGAAAATGAAA+TGG - chr4_1:86110828-86110847 Msa0580840:intron 20.0%
!! TTTGAATCAGAAAATGAAAT+GGG - chr4_1:86110829-86110848 Msa0580840:intron 20.0%
! TGAAAGTCATCATCAAAAAA+AGG - chr4_1:86101841-86101860 Msa0580840:CDS 25.0%
!! ATGGATCTATATGTTTGTTT+TGG - chr4_1:86101974-86101993 Msa0580840:CDS 25.0%
! TATCTACAAGTCTTAAACAA+AGG - chr4_1:86102119-86102138 Msa0580840:CDS 25.0%
! AAAGGTGATTAATTTCTACA+AGG + chr4_1:86102223-86102242 None:intergenic 25.0%
! TTATCATTGTAATTAACGTG+GGG - chr4_1:86102310-86102329 Msa0580840:CDS 25.0%
!! TTGACTTCGATTCTTAATTT+TGG - chr4_1:86102560-86102579 Msa0580840:CDS 25.0%
!!! ATTTTTTTAGGGGTTTGTTT+GGG + chr4_1:86102754-86102773 None:intergenic 25.0%
!!! AATTTTTTTAGGGGTTTGTT+TGG + chr4_1:86102755-86102774 None:intergenic 25.0%
!!! AAGGAGGTTGAATTTTTTTA+GGG + chr4_1:86102765-86102784 None:intergenic 25.0%
!!! TAAGGAGGTTGAATTTTTTT+AGG + chr4_1:86102766-86102785 None:intergenic 25.0%
!! CATTTTTAACAAGTTTAAGG+AGG + chr4_1:86102781-86102800 None:intergenic 25.0%
!!! TTTCTTTTGGTGTAAAACTT+GGG + chr4_1:86102959-86102978 None:intergenic 25.0%
!!! TTTTCTTTTGGTGTAAAACT+TGG + chr4_1:86102960-86102979 None:intergenic 25.0%
!!! ATGTTTGTTGATTTTTCCTT+GGG + chr4_1:86103001-86103020 None:intergenic 25.0%
! AAATTAAGAACATGCACAAT+TGG + chr4_1:86103185-86103204 None:intergenic 25.0%
!!! TGAAGATGTTATCATTTTTC+TGG - chr4_1:86103217-86103236 Msa0580840:intron 25.0%
! TGGCATATACATACTATTAA+GGG - chr4_1:86103237-86103256 Msa0580840:intron 25.0%
!!! GATATAATTTGTTTTGTGTG+TGG + chr4_1:86103313-86103332 None:intergenic 25.0%
! AATTTAAACTTACATGTGCT+GGG + chr4_1:86103352-86103371 None:intergenic 25.0%
! TAATTTAAACTTACATGTGC+TGG + chr4_1:86103353-86103372 None:intergenic 25.0%
!!! CTTTTTTCCCTATTCATATT+TGG + chr4_1:86103386-86103405 None:intergenic 25.0%
! AATAGGGAAAAAAGATTCAT+TGG - chr4_1:86103392-86103411 Msa0580840:intron 25.0%
! TTATGAACATGTCTTTAATG+AGG + chr4_1:86103442-86103461 None:intergenic 25.0%
!! TATATTTGCCTATGTTTTAC+AGG - chr4_1:86103659-86103678 Msa0580840:intron 25.0%
! TAATACTGAAAGATCAATTG+AGG - chr4_1:86103695-86103714 Msa0580840:intron 25.0%
!!! GAGTTTAATTTTATATGGAC+GGG - chr4_1:86103865-86103884 Msa0580840:intron 25.0%
! ACATGAGTACTAATTGAAAT+TGG + chr4_1:86103936-86103955 None:intergenic 25.0%
! TGTTGCAATTACATGTATAT+AGG - chr4_1:86103960-86103979 Msa0580840:intron 25.0%
! GGAAATGCAATTTAACAATA+TGG - chr4_1:86104089-86104108 Msa0580840:intron 25.0%
!! ATTCTGCATTTATTTCTTCA+TGG + chr4_1:86104161-86104180 None:intergenic 25.0%
!!! ACTTTCTCTTGATCATTTTT+TGG + chr4_1:86104231-86104250 None:intergenic 25.0%
! TAATGATGAAGAATTCAACA+AGG - chr4_1:86104278-86104297 Msa0580840:intron 25.0%
! ATATCAAATTCGATGTTACA+TGG - chr4_1:86104587-86104606 Msa0580840:intron 25.0%
!!! TATTTTAATCTAACGGTCTA+TGG + chr4_1:86104623-86104642 None:intergenic 25.0%
! ATCAAAGTGTGAACAAATTA+TGG + chr4_1:86104797-86104816 None:intergenic 25.0%
! TATGGACAAAAAATTGCAAA+GGG - chr4_1:86104856-86104875 Msa0580840:intron 25.0%
! TCTTCCATTGTTTCATAATA+TGG - chr4_1:86105170-86105189 Msa0580840:intron 25.0%
! GATACCATATTATGAAACAA+TGG + chr4_1:86105177-86105196 None:intergenic 25.0%
! AAACAAGAAGAAAAATGGTT+AGG + chr4_1:86105251-86105270 None:intergenic 25.0%
!! TTCAGTGAAATACTCTAAAA+CGG + chr4_1:86105811-86105830 None:intergenic 25.0%
! TCCATTACCTTCAATTAATA+AGG - chr4_1:86106016-86106035 Msa0580840:intron 25.0%
! ACCTTATTAATTGAAGGTAA+TGG + chr4_1:86106020-86106039 None:intergenic 25.0%
! GAATACACCTTATTAATTGA+AGG + chr4_1:86106026-86106045 None:intergenic 25.0%
!!! ATGGTAACAATGGTTTTATT+TGG + chr4_1:86106650-86106669 None:intergenic 25.0%
!! ATTCAAGCTACTAATGATTT+TGG + chr4_1:86106765-86106784 None:intergenic 25.0%
! TGCATTTATCAGGTAAAAAT+TGG + chr4_1:86106796-86106815 None:intergenic 25.0%
!! AGGTTGAACATCTTTATTTA+TGG + chr4_1:86106951-86106970 None:intergenic 25.0%
! GTAAATGTACTAGAAACTAT+AGG + chr4_1:86106971-86106990 None:intergenic 25.0%
! CATATTTGACAATCTTTGAT+TGG + chr4_1:86107041-86107060 None:intergenic 25.0%
! TATTATCAACACAGATAGAA+GGG + chr4_1:86107075-86107094 None:intergenic 25.0%
! TTATTATCAACACAGATAGA+AGG + chr4_1:86107076-86107095 None:intergenic 25.0%
! AAATTGACAAACATCACAAA+TGG + chr4_1:86107101-86107120 None:intergenic 25.0%
! TGAGATAAACTATGAGAAAA+AGG + chr4_1:86107142-86107161 None:intergenic 25.0%
! TTGATTCATTGTGATATTTG+GGG - chr4_1:86107181-86107200 Msa0580840:intron 25.0%
!! CAATAGTGATAAAGTACTTA+TGG + chr4_1:86107234-86107253 None:intergenic 25.0%
!!! TTATCACTTCTAAGGATTTT+AGG + chr4_1:86107367-86107386 None:intergenic 25.0%
! AAAATCCTTAGAAGTGATAA+TGG - chr4_1:86107367-86107386 Msa0580840:intron 25.0%
! ATGAAGGTAAATCAAATTCA+GGG + chr4_1:86107393-86107412 None:intergenic 25.0%
! AATGAAGGTAAATCAAATTC+AGG + chr4_1:86107394-86107413 None:intergenic 25.0%
!!! CCTTTAGAGTTATAAAATGA+AGG + chr4_1:86107409-86107428 None:intergenic 25.0%
!! CCTTCATTTTATAACTCTAA+AGG - chr4_1:86107406-86107425 Msa0580840:intron 25.0%
!! CCAATAACAATTTGGTAATT+TGG + chr4_1:86107536-86107555 None:intergenic 25.0%
! CCAAATTACCAAATTGTTAT+TGG - chr4_1:86107533-86107552 Msa0580840:intron 25.0%
! GAATCATGTAAAACATGATA+TGG + chr4_1:86107628-86107647 None:intergenic 25.0%
!! ACTTTGAAAAGATTAGAATC+AGG + chr4_1:86107655-86107674 None:intergenic 25.0%
!!! ATATTTTTAGGCTATAAACC+TGG - chr4_1:86107748-86107767 Msa0580840:intron 25.0%
! TTACAAAGGTTATGTTCTTA+TGG - chr4_1:86107771-86107790 Msa0580840:intron 25.0%
! TTCATGAAAAGTAACATTTC+TGG + chr4_1:86107824-86107843 None:intergenic 25.0%
! TGTAATCTTGTAAATAAGCA+GGG + chr4_1:86108095-86108114 None:intergenic 25.0%
! ATGTAATCTTGTAAATAAGC+AGG + chr4_1:86108096-86108115 None:intergenic 25.0%
! AATAATCTAAGCCTTCAATT+TGG + chr4_1:86108455-86108474 None:intergenic 25.0%
!! TGAAGTGGATTTAAGAAAAA+GGG + chr4_1:86108772-86108791 None:intergenic 25.0%
!! ATGAAGTGGATTTAAGAAAA+AGG + chr4_1:86108773-86108792 None:intergenic 25.0%
! AATAGTAAATGAAGATGAAG+TGG + chr4_1:86108787-86108806 None:intergenic 25.0%
!! ATCTTCATTTACTATTTTGC+TGG - chr4_1:86108791-86108810 Msa0580840:intron 25.0%
! CACCTTTCAAATTAAAGATT+TGG - chr4_1:86108887-86108906 Msa0580840:intron 25.0%
! TTAGATTTACTTGAAGATTC+AGG - chr4_1:86108987-86109006 Msa0580840:intron 25.0%
!! TTTTATATCTTAATACCACC+AGG - chr4_1:86109123-86109142 Msa0580840:intron 25.0%
! ATGATGTTGAAGAATTTGAT+GGG + chr4_1:86110397-86110416 None:intergenic 25.0%
! CTTGAATTGAATCTAACAAA+GGG + chr4_1:86110422-86110441 None:intergenic 25.0%
!!! TTACTATATGGTTGATTTTG+AGG + chr4_1:86110551-86110570 None:intergenic 25.0%
! AATCTAAGCACTTTAAACTT+TGG - chr4_1:86110587-86110606 Msa0580840:intron 25.0%
!!! ATTGTTGTTTTTTTGCATGT+AGG + chr4_1:86110645-86110664 None:intergenic 25.0%
! TTATTGGAAACACTAATCAA+GGG - chr4_1:86110780-86110799 Msa0580840:intron 25.0%
!!! TTTACTTTAGAACTTGATGA+AGG + chr4_1:86110887-86110906 None:intergenic 25.0%
!!! TCATCAAGTTCTAAAGTAAA+TGG - chr4_1:86110887-86110906 Msa0580840:CDS 25.0%
!! TTCAAGTTTCTTGAACAAAA+CGG - chr4_1:86110916-86110935 Msa0580840:CDS 25.0%
AAAAAAGGAGACTATTGTTG+AGG - chr4_1:86101856-86101875 Msa0580840:CDS 30.0%
TATCATTGTAATTAACGTGG+GGG - chr4_1:86102311-86102330 Msa0580840:CDS 30.0%
!!! ACTTAGTAGCAAGTTGATTT+TGG + chr4_1:86102378-86102397 None:intergenic 30.0%
CACAAGAAATCCATATAGTT+AGG - chr4_1:86102477-86102496 Msa0580840:CDS 30.0%
ATCTCTATGTCCTAACTATA+TGG + chr4_1:86102490-86102509 None:intergenic 30.0%
CGATAAATACTGAAGATTTG+TGG + chr4_1:86102694-86102713 None:intergenic 30.0%
!!! AGGAGGTTGAATTTTTTTAG+GGG + chr4_1:86102764-86102783 None:intergenic 30.0%
!!! GATGTTTGTTGATTTTTCCT+TGG + chr4_1:86103002-86103021 None:intergenic 30.0%
CTGGCATATACATACTATTA+AGG - chr4_1:86103236-86103255 Msa0580840:intron 30.0%
TATCATGGATGCAAAACAAT+TGG + chr4_1:86103568-86103587 None:intergenic 30.0%
GATCTTTCAGTATTAGCAAT+GGG + chr4_1:86103690-86103709 None:intergenic 30.0%
TGATCTTTCAGTATTAGCAA+TGG + chr4_1:86103691-86103710 None:intergenic 30.0%
CAAGTAGAATCACTAAAAGT+CGG + chr4_1:86103824-86103843 None:intergenic 30.0%
AGGTGAGAAAAGAAAATCAA+CGG - chr4_1:86104022-86104041 Msa0580840:intron 30.0%
ATAGACAAGTATTTACCGTT+GGG + chr4_1:86104551-86104570 None:intergenic 30.0%
TCTCTTAATCTAATGGTGTA+CGG - chr4_1:86104701-86104720 Msa0580840:intron 30.0%
TTCTCAAAACAGATGAATGA+TGG - chr4_1:86104817-86104836 Msa0580840:intron 30.0%
GTATGGACAAAAAATTGCAA+AGG - chr4_1:86104855-86104874 Msa0580840:intron 30.0%
! ATATGTACCTGTTTTCTAAC+CGG + chr4_1:86104931-86104950 None:intergenic 30.0%
GGAAGAAACAAGAAGAAAAA+TGG + chr4_1:86105256-86105275 None:intergenic 30.0%
TCAAATATGCAGAAAAACAG+AGG + chr4_1:86105358-86105377 None:intergenic 30.0%
! AAGCTTTTCATCTTCAACAA+TGG - chr4_1:86105377-86105396 Msa0580840:intron 30.0%
ACTAAAGTTTGAGCAATTTG+TGG + chr4_1:86105669-86105688 None:intergenic 30.0%
! ATTGTTGATAGAAGAACGTA+AGG + chr4_1:86105769-86105788 None:intergenic 30.0%
! TCTATCAACAATTTGAAGCA+AGG - chr4_1:86105777-86105796 Msa0580840:intron 30.0%
TCACTGAAATGAAAACTCTA+TGG - chr4_1:86105823-86105842 Msa0580840:intron 30.0%
CACTGAAATGAAAACTCTAT+GGG - chr4_1:86105824-86105843 Msa0580840:intron 30.0%
! CAAGTGATTCAATTTTTGAC+TGG - chr4_1:86105945-86105964 Msa0580840:intron 30.0%
! TCTGATTCTAAGAAGCAATA+TGG - chr4_1:86106128-86106147 Msa0580840:intron 30.0%
TCTAAGAAGCAATATGGAAA+TGG - chr4_1:86106134-86106153 Msa0580840:intron 30.0%
ACAAAACCTAGAGTTATTCT+TGG + chr4_1:86106177-86106196 None:intergenic 30.0%
GATTGGACTTATATGAATTG+GGG + chr4_1:86106256-86106275 None:intergenic 30.0%
GGATTGGACTTATATGAATT+GGG + chr4_1:86106257-86106276 None:intergenic 30.0%
AGGATTGGACTTATATGAAT+TGG + chr4_1:86106258-86106277 None:intergenic 30.0%
! AAAACAGTTGATATACCTGA+AGG + chr4_1:86106503-86106522 None:intergenic 30.0%
TATCTGATTCATCTCATGAT+TGG - chr4_1:86106534-86106553 Msa0580840:intron 30.0%
TTTGGTAAATGAACATGAAC+AGG + chr4_1:86106632-86106651 None:intergenic 30.0%
TCAGATTAACCTTGAAATGT+GGG + chr4_1:86106733-86106752 None:intergenic 30.0%
ATCAGATTAACCTTGAAATG+TGG + chr4_1:86106734-86106753 None:intergenic 30.0%
ACCTGATAAATGCATTATAC+AGG - chr4_1:86106802-86106821 Msa0580840:intron 30.0%
TCCTGTATAATGCATTTATC+AGG + chr4_1:86106806-86106825 None:intergenic 30.0%
AATTTGTATAAACCACCATG+AGG + chr4_1:86106863-86106882 None:intergenic 30.0%
ATGGTGGTTTATACAAATTG+AGG - chr4_1:86106864-86106883 Msa0580840:intron 30.0%
TTAGAAACAGAAGACTGAAA+AGG + chr4_1:86106908-86106927 None:intergenic 30.0%
!! CTATTGTTGATGACTTTAGT+AGG - chr4_1:86107248-86107267 Msa0580840:intron 30.0%
! ATGACTTTAGTAGGTTTGTT+TGG - chr4_1:86107257-86107276 Msa0580840:intron 30.0%
TTCCTACATTGAGTATATGT+TGG + chr4_1:86107495-86107514 None:intergenic 30.0%
GCATATGACCAATAACAATT+TGG + chr4_1:86107544-86107563 None:intergenic 30.0%
! GCAAGGAAGTCTATATTTTT+AGG - chr4_1:86107736-86107755 Msa0580840:intron 30.0%
GTAATCTTGTAAATAAGCAG+GGG + chr4_1:86108094-86108113 None:intergenic 30.0%
AAAGCAAAACAAGAATGAGA+AGG + chr4_1:86108198-86108217 None:intergenic 30.0%
AAGCAAACAAACATGATTGT+TGG - chr4_1:86108256-86108275 Msa0580840:CDS 30.0%
GTTTATATGATTATACCTCC+TGG - chr4_1:86108606-86108625 Msa0580840:CDS 30.0%
TGCAATTTACACACTTGATT+GGG + chr4_1:86108648-86108667 None:intergenic 30.0%
! AAATTGCACAAGTCACTTTA+TGG - chr4_1:86108660-86108679 Msa0580840:CDS 30.0%
ACTTCAGTCTTAATCATCAA+TGG - chr4_1:86108720-86108739 Msa0580840:CDS 30.0%
AATCATCAATGGTTACAAAC+AGG - chr4_1:86108731-86108750 Msa0580840:CDS 30.0%
!! GCCCAAATCTTTAATTTGAA+AGG + chr4_1:86108892-86108911 None:intergenic 30.0%
AATCTAAACAGTACTTTCTC+TGG + chr4_1:86108974-86108993 None:intergenic 30.0%
GCATTAAAATGAGTTTGAGT+GGG + chr4_1:86109197-86109216 None:intergenic 30.0%
AGCATTAAAATGAGTTTGAG+TGG + chr4_1:86109198-86109217 None:intergenic 30.0%
! AGAGTGTTAAGATACTTGAA+AGG - chr4_1:86109224-86109243 Msa0580840:intron 30.0%
! TGAAAAGCCTTGTAATTGAA+GGG + chr4_1:86109288-86109307 None:intergenic 30.0%
GCAATCTATCTCTAAATGTT+TGG + chr4_1:86109594-86109613 None:intergenic 30.0%
!! ACAAAGTATTGAATGGTTGA+GGG + chr4_1:86109712-86109731 None:intergenic 30.0%
!! AACAAAGTATTGAATGGTTG+AGG + chr4_1:86109713-86109732 None:intergenic 30.0%
!! TTGGACAACAAAGTATTGAA+TGG + chr4_1:86109719-86109738 None:intergenic 30.0%
ATTCTAATCACAACATACGA+AGG - chr4_1:86110119-86110138 Msa0580840:intron 30.0%
TTCTAATCACAACATACGAA+GGG - chr4_1:86110120-86110139 Msa0580840:intron 30.0%
CATCTGGTAGATAAAAGTTT+AGG + chr4_1:86110286-86110305 None:intergenic 30.0%
! CTAAACTTTTATCTACCAGA+TGG - chr4_1:86110284-86110303 Msa0580840:intron 30.0%
!! TGATTTGATTTTGAACCATC+TGG + chr4_1:86110302-86110321 None:intergenic 30.0%
GATGATGTTGAAGAATTTGA+TGG + chr4_1:86110398-86110417 None:intergenic 30.0%
GCTTGAATTGAATCTAACAA+AGG + chr4_1:86110423-86110442 None:intergenic 30.0%
CTTTGGTAGACAAAATACAA+TGG - chr4_1:86110604-86110623 Msa0580840:intron 30.0%
!!! TGTTTTTTTGCATGTAGGTT+TGG + chr4_1:86110640-86110659 None:intergenic 30.0%
TCAAACATTTCACAACATGT+AGG - chr4_1:86110668-86110687 Msa0580840:intron 30.0%
CTTATTGGAAACACTAATCA+AGG - chr4_1:86110779-86110798 Msa0580840:intron 30.0%
!! AGTTCTAAAGTAAATGGTTG+TGG - chr4_1:86110893-86110912 Msa0580840:CDS 30.0%
CATATATGGAGTGCAATTCT+GGG - chr4_1:86101750-86101769 Msa0580840:CDS 35.0%
GGATAATAAAGGATAAGGGA+AGG + chr4_1:86102357-86102376 None:intergenic 35.0%
AAAATACACCAAAACACCCA+AGG - chr4_1:86102982-86103001 Msa0580840:intron 35.0%
! TGATTTTTCCTTGGGTGTTT+TGG + chr4_1:86102993-86103012 None:intergenic 35.0%
GACATAAGAAAGGGAAAATG+AGG + chr4_1:86103491-86103510 None:intergenic 35.0%
TGAGACAACAAAAGCTCAAA+TGG - chr4_1:86103996-86104015 Msa0580840:intron 35.0%
GAGACAACAAAAGCTCAAAT+GGG - chr4_1:86103997-86104016 Msa0580840:intron 35.0%
TAAATTGCATTTCCAGTGCT+CGG + chr4_1:86104083-86104102 None:intergenic 35.0%
TTCACTGGACTTGGAATATT+TGG + chr4_1:86104372-86104391 None:intergenic 35.0%
ACAACTTCAGAACTATTCAC+TGG + chr4_1:86104387-86104406 None:intergenic 35.0%
!! TTCTGAAGTTGTTCCAACAA+AGG - chr4_1:86104395-86104414 Msa0580840:intron 35.0%
ACAACTTCATCATCCTTTGT+TGG + chr4_1:86104411-86104430 None:intergenic 35.0%
ATGATGAAGTTGTAGAGACT+TGG - chr4_1:86104418-86104437 Msa0580840:intron 35.0%
TTATTGAGTGTCTTACTTGG+TGG + chr4_1:86104444-86104463 None:intergenic 35.0%
! GTCTTATTGAGTGTCTTACT+TGG + chr4_1:86104447-86104466 None:intergenic 35.0%
TAGACAAGTATTTACCGTTG+GGG + chr4_1:86104550-86104569 None:intergenic 35.0%
GATAGACAAGTATTTACCGT+TGG + chr4_1:86104552-86104571 None:intergenic 35.0%
TTTGTCCATACTTTCTCCAT+TGG + chr4_1:86104846-86104865 None:intergenic 35.0%
CAATAGTGAAGTTACTTGCA+TGG + chr4_1:86105043-86105062 None:intergenic 35.0%
GTTTGTGTAGTACAACTCTT+AGG - chr4_1:86105093-86105112 Msa0580840:intron 35.0%
GTTAGGATCGCAAGAAAAAA+CGG + chr4_1:86105234-86105253 None:intergenic 35.0%
GAAGAACACGAAGAAATCAA+TGG + chr4_1:86105329-86105348 None:intergenic 35.0%
TTCTATGTTCATCCTAGTGA+AGG - chr4_1:86105438-86105457 Msa0580840:intron 35.0%
AAATCAGCAAGATCAGGAAT+AGG + chr4_1:86105582-86105601 None:intergenic 35.0%
!! AAGGTAATGGATCCAAAAGA+AGG + chr4_1:86106007-86106026 None:intergenic 35.0%
! GTATTCATTGGTTATCCAAG+AGG - chr4_1:86106040-86106059 Msa0580840:intron 35.0%
ATCCAAGAGGAGAGTAATAA+TGG - chr4_1:86106053-86106072 Msa0580840:intron 35.0%
TACCATTATTACTCTCCTCT+TGG + chr4_1:86106058-86106077 None:intergenic 35.0%
GGAAATGGAAAATCATTTGC+TGG - chr4_1:86106149-86106168 Msa0580840:intron 35.0%
GATAACAAAACTCCACAGTA+TGG + chr4_1:86106220-86106239 None:intergenic 35.0%
!!! GAGTTTTGTTATCAGAAGCA+TGG - chr4_1:86106227-86106246 Msa0580840:intron 35.0%
! AAGCAATATGGTTTGAGGTT+GGG + chr4_1:86106445-86106464 None:intergenic 35.0%
AGTAGAAGCAATATGGTTTG+AGG + chr4_1:86106450-86106469 None:intergenic 35.0%
AATTGGGAGTAGAAGCAATA+TGG + chr4_1:86106457-86106476 None:intergenic 35.0%
! CATGATTGGTTACTTGATTC+TGG - chr4_1:86106548-86106567 Msa0580840:intron 35.0%
AGCATGATGTATGGTAACAA+TGG + chr4_1:86106660-86106679 None:intergenic 35.0%
ATTGTTACCATACATCATGC+TGG - chr4_1:86106659-86106678 Msa0580840:intron 35.0%
TCTATATTCCCCACATTTCA+AGG - chr4_1:86106721-86106740 Msa0580840:intron 35.0%
CAGATTAACCTTGAAATGTG+GGG + chr4_1:86106732-86106751 None:intergenic 35.0%
GACTGAAAAGGAAAAACTGA+AGG + chr4_1:86106896-86106915 None:intergenic 35.0%
ATATTCCTGAAACTGCACTT+TGG - chr4_1:86106993-86107012 Msa0580840:intron 35.0%
TGAATAGAAGGAACACTCAA+AGG + chr4_1:86107208-86107227 None:intergenic 35.0%
TTGAGTGTTCCTTCTATTCA+TGG - chr4_1:86107208-86107227 Msa0580840:intron 35.0%
TACTTATGGCCATGAATAGA+AGG + chr4_1:86107220-86107239 None:intergenic 35.0%
TTTGATCAAATCCAAAGCTG+AGG - chr4_1:86107285-86107304 Msa0580840:intron 35.0%
!! CTAAAGGCATTCTTCATCAT+AGG - chr4_1:86107422-86107441 Msa0580840:intron 35.0%
CACCAACATATACTCAATGT+AGG - chr4_1:86107490-86107509 Msa0580840:intron 35.0%
TTTATGATGAAGAAGTGGAG+TGG + chr4_1:86107602-86107621 None:intergenic 35.0%
GGAGATTTATGATGAAGAAG+TGG + chr4_1:86107607-86107626 None:intergenic 35.0%
AATATAGACTTCCTTGCTCT+AGG + chr4_1:86107733-86107752 None:intergenic 35.0%
AGAACATAACCTTTGTAACC+AGG + chr4_1:86107769-86107788 None:intergenic 35.0%
TCAACAAAAGGTTGAGATGA+GGG + chr4_1:86107910-86107929 None:intergenic 35.0%
ATCAACAAAAGGTTGAGATG+AGG + chr4_1:86107911-86107930 None:intergenic 35.0%
GAATCTTCTGGTGTAGAAAT+AGG + chr4_1:86107964-86107983 None:intergenic 35.0%
GCAATAATAGGAGAATCAGA+GGG + chr4_1:86108033-86108052 None:intergenic 35.0%
AGCAATAATAGGAGAATCAG+AGG + chr4_1:86108034-86108053 None:intergenic 35.0%
GCATATATGGAATTGACAGT+AGG + chr4_1:86108123-86108142 None:intergenic 35.0%
AGGAGAAGAAGATGCATATA+TGG + chr4_1:86108136-86108155 None:intergenic 35.0%
TTTGCTTCAGTGAAGGATTT+AGG + chr4_1:86108243-86108262 None:intergenic 35.0%
ATGTTTGTTTGCTTCAGTGA+AGG + chr4_1:86108250-86108269 None:intergenic 35.0%
AAAGTGAAACATCATGCTGA+TGG - chr4_1:86108384-86108403 Msa0580840:CDS 35.0%
TTCAATTTGGTTGTATCCCT+TGG + chr4_1:86108442-86108461 None:intergenic 35.0%
AAGGGATACAACCAAATTGA+AGG - chr4_1:86108441-86108460 Msa0580840:CDS 35.0%
!!! TTTTGAAACATACTCTCCAG+TGG - chr4_1:86108473-86108492 Msa0580840:CDS 35.0%
!! CATTGTTCACATCAAGTTGA+TGG + chr4_1:86108557-86108576 None:intergenic 35.0%
TTGAAGTTCTCCATGCAAAA+AGG + chr4_1:86108580-86108599 None:intergenic 35.0%
TTTACACACTTGATTGGGAT+TGG + chr4_1:86108643-86108662 None:intergenic 35.0%
GTGCAATTTACACACTTGAT+TGG + chr4_1:86108649-86108668 None:intergenic 35.0%
!! TTGATGATGTGATCTTAGCA+GGG - chr4_1:86108820-86108839 Msa0580840:intron 35.0%
GGCATTCTTAAATACTTCCT+TGG - chr4_1:86108909-86108928 Msa0580840:intron 35.0%
AATGAGCAACTTCAATACCA+AGG + chr4_1:86108929-86108948 None:intergenic 35.0%
AGCTTAACATTTGGATCAGA+AGG + chr4_1:86109041-86109060 None:intergenic 35.0%
TCATTGTGGAGCTTAACATT+TGG + chr4_1:86109050-86109069 None:intergenic 35.0%
AAGGTTGTGAATCATCATTG+TGG + chr4_1:86109064-86109083 None:intergenic 35.0%
TAAGCAGGAACATCAGAATA+AGG + chr4_1:86109083-86109102 None:intergenic 35.0%
TGAGTGATGAATGTGATATC+TGG + chr4_1:86109149-86109168 None:intergenic 35.0%
AAAGCTTCCCTTCAATTACA+AGG - chr4_1:86109278-86109297 Msa0580840:intron 35.0%
! CTGAAAAGCCTTGTAATTGA+AGG + chr4_1:86109289-86109308 None:intergenic 35.0%
GATACCAGAAGATCTATTTC+TGG - chr4_1:86109332-86109351 Msa0580840:intron 35.0%
TGATTGTCACAGTAGATAAC+AGG + chr4_1:86109527-86109546 None:intergenic 35.0%
AGGTAGTAGTTTGAGAATGT+TGG + chr4_1:86109642-86109661 None:intergenic 35.0%
TAGTGAAAAAATCAGCAAGC+TGG + chr4_1:86109679-86109698 None:intergenic 35.0%
! CAATACTTTGTTGTCCAAGT+TGG - chr4_1:86109721-86109740 Msa0580840:intron 35.0%
AATGTCTATCATCTCCAACT+TGG + chr4_1:86109738-86109757 None:intergenic 35.0%
CAATAGTGAAGTTACTTGCA+TGG + chr4_1:86105043-86105062 None:intergenic 35.0%
GTTTGTGTAGTACAACTCTT+AGG - chr4_1:86105093-86105112 Msa0580840:intron 35.0%
! CTAATCATATTTTGTGCTCG+AGG - chr4_1:86109990-86110009 Msa0580840:intron 35.0%
CAAACCAACAACAATCTTCA+TGG - chr4_1:86110260-86110279 Msa0580840:intron 35.0%
! AATGTTGAGATGATAGTGCA+GGG + chr4_1:86110340-86110359 None:intergenic 35.0%
!! AATTTGATGGGTTTGAAGTG+AGG + chr4_1:86110385-86110404 None:intergenic 35.0%
TAAAGCTAAGAGTGGAAGAA+GGG + chr4_1:86110475-86110494 None:intergenic 35.0%
TTTGAGGAGTAGCATAATTG+AGG + chr4_1:86110535-86110554 None:intergenic 35.0%
GCTAAAGCTGATTGAAAAGT+TGG + chr4_1:86110743-86110762 None:intergenic 35.0%
CCAGAATTGCACTCCATATA+TGG + chr4_1:86101752-86101771 None:intergenic 40.0%
CCATATATGGAGTGCAATTC+TGG - chr4_1:86101749-86101768 Msa0580840:CDS 40.0%
TGATGGAGATAGTGAACTCA+AGG - chr4_1:86101781-86101800 Msa0580840:CDS 40.0%
AAGAGAAGTGAGCATAGTAC+TGG - chr4_1:86101809-86101828 Msa0580840:CDS 40.0%
AGGAATTAACGACCTGATCA+TGG + chr4_1:86102337-86102356 None:intergenic 40.0%
AATTACCTTTCGTGCATGCA+AGG - chr4_1:86102442-86102461 Msa0580840:CDS 40.0%
ACTGAAAGATCAATTGAGGC+TGG - chr4_1:86103699-86103718 Msa0580840:intron 40.0%
ATCCTCGCCCAAAAATGATA+AGG - chr4_1:86103734-86103753 Msa0580840:intron 40.0%
!! AACCTTATCATTTTTGGGCG+AGG + chr4_1:86103739-86103758 None:intergenic 40.0%
AACAAAAGCTCAAATGGGTG+AGG - chr4_1:86104002-86104021 Msa0580840:intron 40.0%
TGTTACTAGGAACTCTTCCA+AGG + chr4_1:86104203-86104222 None:intergenic 40.0%
AACAAGGAAGAGTTGTCACT+TGG - chr4_1:86104294-86104313 Msa0580840:intron 40.0%
AAATCAGGTAGCACAACTGA+AGG - chr4_1:86104342-86104361 Msa0580840:intron 40.0%
AATCAGGTAGCACAACTGAA+GGG - chr4_1:86104343-86104362 Msa0580840:intron 40.0%
TCAGAACTATTCACTGGACT+TGG + chr4_1:86104381-86104400 None:intergenic 40.0%
TAAGACAATGAGAGATGCTG+AGG - chr4_1:86104461-86104480 Msa0580840:intron 40.0%
AAACTCCTGCAAAGAAAGCT+AGG - chr4_1:86104499-86104518 Msa0580840:intron 40.0%
AACTCCTGCAAAGAAAGCTA+GGG - chr4_1:86104500-86104519 Msa0580840:intron 40.0%
!! AGATGAATGATGGATGCCAA+TGG - chr4_1:86104827-86104846 Msa0580840:intron 40.0%
! TGTTTTCTAACCGGACATGA+TGG + chr4_1:86104922-86104941 None:intergenic 40.0%
ATCATGTCCGGTTAGAAAAC+AGG - chr4_1:86104921-86104940 Msa0580840:intron 40.0%
GATCGCAAGAAAAAACGGTT+AGG + chr4_1:86105229-86105248 None:intergenic 40.0%
TAATTCGAACCAGTAAGGAG+TGG + chr4_1:86105486-86105505 None:intergenic 40.0%
TGATTTGAACCGTGATGCAT+GGG - chr4_1:86105596-86105615 Msa0580840:intron 40.0%
! GCAATCATCTGGTTTATTCG+TGG - chr4_1:86105625-86105644 Msa0580840:intron 40.0%
GGAAAAGGACAAGTGCAATT+AGG + chr4_1:86105876-86105895 None:intergenic 40.0%
! CAAGTCTCAAGTCCTTCTTT+TGG - chr4_1:86105992-86106011 Msa0580840:intron 40.0%
!! CTTGAGTCTTCTGAAACAGA+GGG + chr4_1:86106092-86106111 None:intergenic 40.0%
CTGGTTCCAAGAATAACTCT+AGG - chr4_1:86106168-86106187 Msa0580840:intron 40.0%
CAAACGTACAAACCATACTG+TGG - chr4_1:86106205-86106224 Msa0580840:intron 40.0%
!! AGTAGCATTTGCTGTAGGAT+TGG + chr4_1:86106273-86106292 None:intergenic 40.0%
!! GCATTAGTAGCATTTGCTGT+AGG + chr4_1:86106278-86106297 None:intergenic 40.0%
TTGTCAACTGCAGAATTCAC+AGG + chr4_1:86106326-86106345 None:intergenic 40.0%
! AGCAATATGGTTTGAGGTTG+GGG + chr4_1:86106444-86106463 None:intergenic 40.0%
! GAAGCAATATGGTTTGAGGT+TGG + chr4_1:86106446-86106465 None:intergenic 40.0%
! ACAGTTGATATACCTGAAGG+AGG + chr4_1:86106500-86106519 None:intergenic 40.0%
AACAGTACCAGCATGATGTA+TGG + chr4_1:86106669-86106688 None:intergenic 40.0%
TGCACTTTGGCACTTTAGAT+TGG - chr4_1:86107006-86107025 Msa0580840:intron 40.0%
GCACTTTGGCACTTTAGATT+GGG - chr4_1:86107007-86107026 Msa0580840:intron 40.0%
CACTTTGGCACTTTAGATTG+GGG - chr4_1:86107008-86107027 Msa0580840:intron 40.0%
ATGAATAGACACCTCAGCTT+TGG + chr4_1:86107299-86107318 None:intergenic 40.0%
! TCTACTCTAGCATTTTGCTG+AGG + chr4_1:86107463-86107482 None:intergenic 40.0%
GGCTATAAACCTGGTTACAA+AGG - chr4_1:86107757-86107776 Msa0580840:intron 40.0%
GATATAGTGCCAGGTATCAA+TGG + chr4_1:86107884-86107903 None:intergenic 40.0%
GGTGTAGAAATAGGAGAAGT+GGG + chr4_1:86107955-86107974 None:intergenic 40.0%
TGGTGTAGAAATAGGAGAAG+TGG + chr4_1:86107956-86107975 None:intergenic 40.0%
!! GCAGAAGATTCAGAAGTGTT+GGG + chr4_1:86108009-86108028 None:intergenic 40.0%
! AGCAGAAGATTCAGAAGTGT+TGG + chr4_1:86108010-86108029 None:intergenic 40.0%
ATCTTGTAAATAAGCAGGGG+TGG + chr4_1:86108091-86108110 None:intergenic 40.0%
CTTAATGCCTTGAGTAAGAC+TGG - chr4_1:86108300-86108319 Msa0580840:CDS 40.0%
CTTGAGTAAGACTGGTACTT+GGG - chr4_1:86108308-86108327 Msa0580840:CDS 40.0%
!! TCTGGCTTTATACCTCTCTA+TGG + chr4_1:86108412-86108431 None:intergenic 40.0%
! AGAGAGGTATAAAGCCAGAT+TGG - chr4_1:86108413-86108432 Msa0580840:CDS 40.0%
AGTCAGGATTGTTCTTGCTT+TGG - chr4_1:86108509-86108528 Msa0580840:CDS 40.0%
CTTTGGCCTCTATGCATAAT+TGG - chr4_1:86108526-86108545 Msa0580840:CDS 40.0%
GAGATGCCAATTATGCATAG+AGG + chr4_1:86108535-86108554 None:intergenic 40.0%
! GTGAACAATGCCTTTTTGCA+TGG - chr4_1:86108567-86108586 Msa0580840:CDS 40.0%
ACTTGATTGGGATTGGAATG+TGG + chr4_1:86108636-86108655 None:intergenic 40.0%
CAAGCAGGAAATGGTATGAA+AGG - chr4_1:86108694-86108713 Msa0580840:CDS 40.0%
!! GTTGATGATGTGATCTTAGC+AGG - chr4_1:86108819-86108838 Msa0580840:intron 40.0%
GAAGTTGCTCATTCTTCATC+TGG - chr4_1:86108936-86108955 Msa0580840:intron 40.0%
TACTAATAGGCTTGGAATGG+AGG + chr4_1:86109016-86109035 None:intergenic 40.0%
GTGTACTAATAGGCTTGGAA+TGG + chr4_1:86109019-86109038 None:intergenic 40.0%
! AGAAGGTGTACTAATAGGCT+TGG + chr4_1:86109024-86109043 None:intergenic 40.0%
! GGATCAGAAGGTGTACTAAT+AGG + chr4_1:86109029-86109048 None:intergenic 40.0%
ATTCTGATGTTCCTGCTTAC+AGG - chr4_1:86109084-86109103 Msa0580840:intron 40.0%
AGATACTTGAAAGGATCTCC+AGG - chr4_1:86109233-86109252 Msa0580840:intron 40.0%
! ATTGAAGGGAAGCTTTTCGA+GGG + chr4_1:86109274-86109293 None:intergenic 40.0%
! AATTGAAGGGAAGCTTTTCG+AGG + chr4_1:86109275-86109294 None:intergenic 40.0%
CTGACCAGAAATAGATCTTC+TGG + chr4_1:86109339-86109358 None:intergenic 40.0%
! TTCTGGTCAGTGCTTCTTTT+TGG - chr4_1:86109349-86109368 Msa0580840:intron 40.0%
! TCTGGTCAGTGCTTCTTTTT+GGG - chr4_1:86109350-86109369 Msa0580840:intron 40.0%
GATCCATTGCAATTCACATG+AGG + chr4_1:86109462-86109481 None:intergenic 40.0%
ACAGTAGATAACAGGAGTCT+TGG + chr4_1:86109519-86109538 None:intergenic 40.0%
GCAGTTTCTCTCGTACAATA+TGG + chr4_1:86109616-86109635 None:intergenic 40.0%
TATTGTACGAGAGAAACTGC+AGG - chr4_1:86109616-86109635 Msa0580840:intron 40.0%
!! AAAATCAGCAAGCTGGTCTT+TGG + chr4_1:86109672-86109691 None:intergenic 40.0%
ATTTATCACCCTCCAACTTG+TGG - chr4_1:86109755-86109774 Msa0580840:intron 40.0%
TTTATCACCCTCCAACTTGT+GGG - chr4_1:86109756-86109775 Msa0580840:intron 40.0%
TCAGGTACAAAGATGTGTTG+AGG - chr4_1:86110088-86110107 Msa0580840:intron 40.0%
!! ACCTGATAATAGCATCGATG+CGG + chr4_1:86110204-86110223 None:intergenic 40.0%
!! TTGTTGTTGGTTTGTGCTGA+TGG + chr4_1:86110254-86110273 None:intergenic 40.0%
TAGGCCATGAAGATTGTTGT+TGG + chr4_1:86110267-86110286 None:intergenic 40.0%
! GAATGTTGAGATGATAGTGC+AGG + chr4_1:86110341-86110360 None:intergenic 40.0%
!! AAGAAGGGTATCTTGGTAGT+TGG + chr4_1:86110460-86110479 None:intergenic 40.0%
CTAAAGCTAAGAGTGGAAGA+AGG + chr4_1:86110476-86110495 None:intergenic 40.0%
AGGAGAACTAAAGCTAAGAG+TGG + chr4_1:86110483-86110502 None:intergenic 40.0%
CAATGCATGGGATTTGATTC+AGG + chr4_1:86110503-86110522 None:intergenic 40.0%
CTGAATCAAATCCCATGCAT+TGG - chr4_1:86110501-86110520 Msa0580840:intron 40.0%
AGGAAGCTATTCCAATGCAT+GGG + chr4_1:86110515-86110534 None:intergenic 40.0%
GCAGCACTTTCTTCACTTAT+TGG - chr4_1:86110764-86110783 Msa0580840:intron 40.0%
GGGAATCAAAATCAAAGTGC+AGG - chr4_1:86110800-86110819 Msa0580840:intron 40.0%
CCATTCTGTGTATTGTTCAC+TGG + chr4_1:86110944-86110963 None:intergenic 40.0%
CCAGTGAACAATACACAGAA+TGG - chr4_1:86110941-86110960 Msa0580840:CDS 40.0%
!! GCACTTTTAGGTGCAGAAAA+TGG + chr4_1:86110995-86111014 None:intergenic 40.0%
TTGTCACTATTATCACCACC+AGG + chr4_1:86111028-86111047 None:intergenic 40.0%
! AATTCTGGGAGATCTGGTGA+TGG - chr4_1:86101764-86101783 Msa0580840:CDS 45.0%
! TTAGGGGTTTGTTTGGGCTA+TGG + chr4_1:86102748-86102767 None:intergenic 45.0%
TTTGTGTGTGGCACATGCAT+AGG + chr4_1:86103301-86103320 None:intergenic 45.0%
AATGTAAGGAACAAGGAGCC+TGG - chr4_1:86103542-86103561 Msa0580840:intron 45.0%
TGGATGCAAAACAATTGGCC+AGG + chr4_1:86103563-86103582 None:intergenic 45.0%
GGGTGCTTCCTGTAAAACAT+AGG + chr4_1:86103670-86103689 None:intergenic 45.0%
CATTTCCAGTGCTCGGTATT+CGG + chr4_1:86104076-86104095 None:intergenic 45.0%
! GGAAGAGTTGTCACTTGGAT+TGG - chr4_1:86104299-86104318 Msa0580840:intron 45.0%
! CAAACCCTAGCTTTCTTTGC+AGG + chr4_1:86104507-86104526 None:intergenic 45.0%
GGATGCCAATGGAGAAAGTA+TGG - chr4_1:86104838-86104857 Msa0580840:intron 45.0%
TGCAACGATAGTAAGCTCGA+GGG + chr4_1:86104891-86104910 None:intergenic 45.0%
CCAGAGAAGATGAATTGCAG+CGG + chr4_1:86105277-86105296 None:intergenic 45.0%
ACAGAGTTTGGACCTTCACT+AGG + chr4_1:86105453-86105472 None:intergenic 45.0%
TAGTGAAGGTCCAAACTCTG+TGG - chr4_1:86105452-86105471 Msa0580840:intron 45.0%
GGAGTAACTACCACAGAGTT+TGG + chr4_1:86105465-86105484 None:intergenic 45.0%
GTAGTTACTCCACTCCTTAC+TGG - chr4_1:86105474-86105493 Msa0580840:intron 45.0%
CGAGGTAATTCGAACCAGTA+AGG + chr4_1:86105491-86105510 None:intergenic 45.0%
CGGTTCAAATCAGCAAGATC+AGG + chr4_1:86105588-86105607 None:intergenic 45.0%
! CTGATTTGAACCGTGATGCA+TGG - chr4_1:86105595-86105614 Msa0580840:intron 45.0%
GAGTTCATCCCAAACGTCAA+TGG + chr4_1:86105706-86105725 None:intergenic 45.0%
GGACAAGTGCAATTAGGCAT+TGG + chr4_1:86105870-86105889 None:intergenic 45.0%
CAGATCTCATAGCTTCACAC+CGG + chr4_1:86105902-86105921 None:intergenic 45.0%
!! GCTTGAGTCTTCTGAAACAG+AGG + chr4_1:86106093-86106112 None:intergenic 45.0%
GTTGACAATTCTCCTCCTAC+TGG - chr4_1:86106338-86106357 Msa0580840:intron 45.0%
! GCAATATGGTTTGAGGTTGG+GGG + chr4_1:86106443-86106462 None:intergenic 45.0%
CCAGAGGAAGAAGGGAAATT+GGG + chr4_1:86106473-86106492 None:intergenic 45.0%
ACCAGAGGAAGAAGGGAAAT+TGG + chr4_1:86106474-86106493 None:intergenic 45.0%
TACAGGATCTGATTACCCAC+AGG - chr4_1:86106819-86106838 Msa0580840:intron 45.0%
CTGATTACCCACAGGATGAT+TGG - chr4_1:86106827-86106846 Msa0580840:intron 45.0%
! TACCCACAGGATGATTGGTT+TGG - chr4_1:86106832-86106851 Msa0580840:intron 45.0%
AGCCAAACCAATCATCCTGT+GGG + chr4_1:86106837-86106856 None:intergenic 45.0%
!! ATTGGTTTGGCTGATCCTCA+TGG - chr4_1:86106845-86106864 Msa0580840:intron 45.0%
AAGTGCCAAAGTGCAGTTTC+AGG + chr4_1:86107001-86107020 None:intergenic 45.0%
CAGGGCCATTATCACTTCTA+AGG + chr4_1:86107375-86107394 None:intergenic 45.0%
CATCTACCATCCAATCTCAC+AGG - chr4_1:86107695-86107714 Msa0580840:intron 45.0%
TTTGGTCCTGTGAGATTGGA+TGG + chr4_1:86107704-86107723 None:intergenic 45.0%
GAAGTTTGGTCCTGTGAGAT+TGG + chr4_1:86107708-86107727 None:intergenic 45.0%
! CCTTGCTCTAGGTTGAAGTT+TGG + chr4_1:86107722-86107741 None:intergenic 45.0%
CCAAACTTCAACCTAGAGCA+AGG - chr4_1:86107719-86107738 Msa0580840:intron 45.0%
ATCAATGGCAGAAGTAGGAG+TGG + chr4_1:86107869-86107888 None:intergenic 45.0%
CAGGTATCAATGGCAGAAGT+AGG + chr4_1:86107874-86107893 None:intergenic 45.0%
CTACTTCTGCCATTGATACC+TGG - chr4_1:86107872-86107891 Msa0580840:CDS 45.0%
GGGTCAGGATCATCAACAAA+AGG + chr4_1:86107922-86107941 None:intergenic 45.0%
GAAATAGGAGAAGTGGGAAG+AGG + chr4_1:86107949-86107968 None:intergenic 45.0%
ACACCAGAAGATTCACCTCA+TGG - chr4_1:86107970-86107989 Msa0580840:intron 45.0%
GAACCATGAGGTGAATCTTC+TGG + chr4_1:86107976-86107995 None:intergenic 45.0%
GGTGAATTGAGTGAACCATG+AGG + chr4_1:86107988-86108007 None:intergenic 45.0%
ACAGGTGGAGGAGCAATAAT+AGG + chr4_1:86108045-86108064 None:intergenic 45.0%
AGTCTAGTAGAGACTCTGAC+AGG + chr4_1:86108063-86108082 None:intergenic 45.0%
!! ATTTAGGCTCAGGTTGAGTG+TGG + chr4_1:86108227-86108246 None:intergenic 45.0%
TCAGTGAAGGATTTAGGCTC+AGG + chr4_1:86108237-86108256 None:intergenic 45.0%
CCAAGTACCAGTCTTACTCA+AGG + chr4_1:86108310-86108329 None:intergenic 45.0%
CCTTGAGTAAGACTGGTACT+TGG - chr4_1:86108307-86108326 Msa0580840:CDS 45.0%
TGGGTTTAACATGAGGTGGA+AGG + chr4_1:86108344-86108363 None:intergenic 45.0%
CCTATGGGTTTAACATGAGG+TGG + chr4_1:86108348-86108367 None:intergenic 45.0%
CCACCTCATGTTAAACCCAT+AGG - chr4_1:86108345-86108364 Msa0580840:CDS 45.0%
CAGCCTATGGGTTTAACATG+AGG + chr4_1:86108351-86108370 None:intergenic 45.0%
ATGTTAAACCCATAGGCTGC+AGG - chr4_1:86108352-86108371 Msa0580840:CDS 45.0%
ATGCTGATGGTTCCATAGAG+AGG - chr4_1:86108397-86108416 Msa0580840:CDS 45.0%
! TAAAGCCAGATTGGTTGCCA+AGG - chr4_1:86108422-86108441 Msa0580840:CDS 45.0%
! AAAGCCAGATTGGTTGCCAA+GGG - chr4_1:86108423-86108442 Msa0580840:CDS 45.0%
AGCAAGAACAATCCTGACTG+TGG + chr4_1:86108508-86108527 None:intergenic 45.0%
! ATGGATTGAAGCAAGCAAGC+AGG - chr4_1:86108679-86108698 Msa0580840:CDS 45.0%
TGAAGCAAGCAAGCAGGAAA+TGG - chr4_1:86108685-86108704 Msa0580840:CDS 45.0%
GATCTTAGCAGGGAACTCTT+TGG - chr4_1:86108830-86108849 Msa0580840:intron 45.0%
CCAATCAATCTCCTGTAAGC+AGG + chr4_1:86109098-86109117 None:intergenic 45.0%
CCTGCTTACAGGAGATTGAT+TGG - chr4_1:86109095-86109114 Msa0580840:intron 45.0%
GATGAATGTGATATCTGGCC+TGG + chr4_1:86109144-86109163 None:intergenic 45.0%
! AAGGCTTTTCAGATGCAGAC+TGG - chr4_1:86109297-86109316 Msa0580840:intron 45.0%
! AGGCTTTTCAGATGCAGACT+GGG - chr4_1:86109298-86109317 Msa0580840:intron 45.0%
TGGGCAAGTCACTCATTTCT+TGG - chr4_1:86109369-86109388 Msa0580840:intron 45.0%
GCAAGTCACTCATTTCTTGG+AGG - chr4_1:86109372-86109391 Msa0580840:intron 45.0%
TGTCAGCAAATCCTCTTCTG+AGG - chr4_1:86109412-86109431 Msa0580840:intron 45.0%
TCTATACTCAGCCTCAGAAG+AGG + chr4_1:86109426-86109445 None:intergenic 45.0%
TGAGGCTGAGTATAGAGCTT+TGG - chr4_1:86109430-86109449 Msa0580840:intron 45.0%
CAGCCTCATGTGAATTGCAA+TGG - chr4_1:86109456-86109475 Msa0580840:intron 45.0%
!! AGCTGGTCTTTGGAAGAGAT+AGG + chr4_1:86109662-86109681 None:intergenic 45.0%
TTATCACCCTCCAACTTGTG+GGG - chr4_1:86109757-86109776 Msa0580840:intron 45.0%
! TGATGGCATTGAACCAGAGT+TGG + chr4_1:86110237-86110256 None:intergenic 45.0%
! ATGATAGTGCAGGGTTGGAT+AGG + chr4_1:86110331-86110350 None:intergenic 45.0%
! TTGAGATGATAGTGCAGGGT+TGG + chr4_1:86110336-86110355 None:intergenic 45.0%
GTGAGGTCAAGAGTGATAGT+TGG + chr4_1:86110368-86110387 None:intergenic 45.0%
!! AGAGTGGAAGAAGGGTATCT+TGG + chr4_1:86110467-86110486 None:intergenic 45.0%
GAGGAAGCTATTCCAATGCA+TGG + chr4_1:86110516-86110535 None:intergenic 45.0%
!! GAAATGGGCTGAGATGTTTC+AGG - chr4_1:86110844-86110863 Msa0580840:intron 45.0%
GGTGCAGAAAATGGCAAAGA+AGG + chr4_1:86110986-86111005 None:intergenic 45.0%
!!! GGAGATGCAGAAGCACTTTT+AGG + chr4_1:86111007-86111026 None:intergenic 45.0%
!! AAAAGTGCTTCTGCATCTCC+TGG - chr4_1:86111007-86111026 Msa0580840:exon 45.0%
!! AATATATTATATATAAATAG+GGG - chr4_1:86102925-86102944 Msa0580840:intron 5.0%
!!! TATTTTCAATTTAATATTTA+CGG + chr4_1:86103089-86103108 None:intergenic 5.0%
!! AATTCAATAAAAATTAATAA+CGG + chr4_1:86103776-86103795 None:intergenic 5.0%
!!! ATTAATTTTTATTGAATTAT+TGG - chr4_1:86103778-86103797 Msa0580840:intron 5.0%
! GAGTGCAATTCTGGGAGATC+TGG - chr4_1:86101758-86101777 Msa0580840:CDS 50.0%
GTTTGCCTTGCATGCACGAA+AGG + chr4_1:86102450-86102469 None:intergenic 50.0%
TTGGGCGAGGATATTGTGCT+TGG + chr4_1:86103726-86103745 None:intergenic 50.0%
AATGACCGAATACCGAGCAC+TGG - chr4_1:86104068-86104087 Msa0580840:intron 50.0%
! GATCTTGTTTCCCTCAGCCT+TGG - chr4_1:86104183-86104202 Msa0580840:intron 50.0%
AGGAACTCTTCCAAGGCTGA+GGG + chr4_1:86104196-86104215 None:intergenic 50.0%
TAGGAACTCTTCCAAGGCTG+AGG + chr4_1:86104197-86104216 None:intergenic 50.0%
AGCAAGATGTGACACCCCAA+CGG - chr4_1:86104533-86104552 Msa0580840:intron 50.0%
GTGCAACGATAGTAAGCTCG+AGG + chr4_1:86104892-86104911 None:intergenic 50.0%
CACAGTTGCACCATCATGTC+CGG - chr4_1:86104909-86104928 Msa0580840:intron 50.0%
CCGCTGCAATTCATCTTCTC+TGG - chr4_1:86105274-86105293 Msa0580840:intron 50.0%
! CTGGTTCGAATTACCTCGCA+TGG - chr4_1:86105493-86105512 Msa0580840:intron 50.0%
AGATCCATGCAACGTGCACT+TGG - chr4_1:86105519-86105538 Msa0580840:intron 50.0%
TGAACCGTGATGCATGGGAA+CGG - chr4_1:86105601-86105620 Msa0580840:intron 50.0%
ATGGGAACGGTGCAATCATC+TGG - chr4_1:86105614-86105633 Msa0580840:intron 50.0%
ATGAGCACGCCATTGACGTT+TGG - chr4_1:86105694-86105713 Msa0580840:intron 50.0%
TGAGCACGCCATTGACGTTT+GGG - chr4_1:86105695-86105714 Msa0580840:intron 50.0%
! GCACTTGTCCTTTTCCATGC+CGG - chr4_1:86105880-86105899 Msa0580840:intron 50.0%
!! TCCTCCTACTGGTTTGACTC+AGG - chr4_1:86106349-86106368 Msa0580840:intron 50.0%
TCCTGAGTCAAACCAGTAGG+AGG + chr4_1:86106353-86106372 None:intergenic 50.0%
TGCTCCTGAGTCAAACCAGT+AGG + chr4_1:86106356-86106375 None:intergenic 50.0%
CCCAATTTCCCTTCTTCCTC+TGG - chr4_1:86106470-86106489 Msa0580840:intron 50.0%
!! GAGGAGTACCAGAGGAAGAA+GGG + chr4_1:86106481-86106500 None:intergenic 50.0%
CAGCCAAACCAATCATCCTG+TGG + chr4_1:86106838-86106857 None:intergenic 50.0%
ATGGCAGAAGTAGGAGTGGA+AGG + chr4_1:86107865-86107884 None:intergenic 50.0%
TGAGGGAGTGATATAGTGCC+AGG + chr4_1:86107893-86107912 None:intergenic 50.0%
AGGAGAAGTGGGAAGAGGTA+GGG + chr4_1:86107944-86107963 None:intergenic 50.0%
TAGGAGAAGTGGGAAGAGGT+AGG + chr4_1:86107945-86107964 None:intergenic 50.0%
CTAGTAGAGACTCTGACAGG+TGG + chr4_1:86108060-86108079 None:intergenic 50.0%
TTAAACCCATAGGCTGCAGG+TGG - chr4_1:86108355-86108374 Msa0580840:CDS 50.0%
TAAACCCATAGGCTGCAGGT+GGG - chr4_1:86108356-86108375 Msa0580840:CDS 50.0%
TAAACCCACCTGCAGCCTAT+GGG + chr4_1:86108363-86108382 None:intergenic 50.0%
GTATCCCTTGGCAACCAATC+TGG + chr4_1:86108430-86108449 None:intergenic 50.0%
ACTGTGGTAAGCTTAGCCAC+TGG + chr4_1:86108492-86108511 None:intergenic 50.0%
TGGCTAAGCTTACCACAGTC+AGG - chr4_1:86108493-86108512 Msa0580840:CDS 50.0%
TTGGAATGTGGAACACCAGG+AGG + chr4_1:86108624-86108643 None:intergenic 50.0%
GGATTGGAATGTGGAACACC+AGG + chr4_1:86108627-86108646 None:intergenic 50.0%
CTTAGCAGGGAACTCTTTGG+AGG - chr4_1:86108833-86108852 Msa0580840:intron 50.0%
GAATGTGATATCTGGCCTGG+TGG + chr4_1:86109141-86109160 None:intergenic 50.0%
TTGAAAGGATCTCCAGGTCG+TGG - chr4_1:86109239-86109258 Msa0580840:intron 50.0%
! TTTTCAGATGCAGACTGGGC+AGG - chr4_1:86109302-86109321 Msa0580840:intron 50.0%
TTGGTGCGCTCATGAAACAC+AGG + chr4_1:86109575-86109594 None:intergenic 50.0%
TATCACCCTCCAACTTGTGG+GGG - chr4_1:86109758-86109777 Msa0580840:intron 50.0%
! ATAGTCCCCCACAAGTTGGA+GGG + chr4_1:86109766-86109785 None:intergenic 50.0%
! AATAGTCCCCCACAAGTTGG+AGG + chr4_1:86109767-86109786 None:intergenic 50.0%
TGCAATAGTCCCCCACAAGT+TGG + chr4_1:86109770-86109789 None:intergenic 50.0%
TTGCTGAAAGTGGAAGGCTG+TGG + chr4_1:86110154-86110173 None:intergenic 50.0%
TGGCTGTTGCTGAAAGTGGA+AGG + chr4_1:86110160-86110179 None:intergenic 50.0%
TCCACTTTCAGCAACAGCCA+TGG - chr4_1:86110160-86110179 Msa0580840:intron 50.0%
! GCCGCATCGATGCTATTATC+AGG - chr4_1:86110200-86110219 Msa0580840:intron 50.0%
GGTTCATCAACCTCCAACTC+TGG - chr4_1:86110221-86110240 Msa0580840:intron 50.0%
! TGGCATTGAACCAGAGTTGG+AGG + chr4_1:86110234-86110253 None:intergenic 50.0%
TTAACGTGGGGGCCATGATC+AGG - chr4_1:86102322-86102341 Msa0580840:CDS 55.0%
! GGGGTTTGTTTGGGCTATGG+AGG + chr4_1:86102745-86102764 None:intergenic 55.0%
CGATAGTAAGCTCGAGGGCA+AGG + chr4_1:86104886-86104905 None:intergenic 55.0%
GCATGGATCTACTCCATGCG+AGG + chr4_1:86105509-86105528 None:intergenic 55.0%
TGCACCGTTCCCATGCATCA+CGG + chr4_1:86105608-86105627 None:intergenic 55.0%
GCTTCACACCGGCATGGAAA+AGG + chr4_1:86105891-86105910 None:intergenic 55.0%
CTCATAGCTTCACACCGGCA+TGG + chr4_1:86105897-86105916 None:intergenic 55.0%
ATCTGCACGCGCACATCGTA+TGG - chr4_1:86105917-86105936 Msa0580840:intron 55.0%
! TGGTTTGAGGTTGGGGGAGA+AGG + chr4_1:86106437-86106456 None:intergenic 55.0%
!! GGAGGAGTACCAGAGGAAGA+AGG + chr4_1:86106482-86106501 None:intergenic 55.0%
TCCTCTGGTACTCCTCCTTC+AGG - chr4_1:86106485-86106504 Msa0580840:intron 55.0%
!! ACCTGAAGGAGGAGTACCAG+AGG + chr4_1:86106489-86106508 None:intergenic 55.0%
GGTTTGGCTGATCCTCATGG+TGG - chr4_1:86106848-86106867 Msa0580840:intron 55.0%
GTAGGAGTGGAAGGCTGGTA+AGG + chr4_1:86107856-86107875 None:intergenic 55.0%
CAGAAGTAGGAGTGGAAGGC+TGG + chr4_1:86107861-86107880 None:intergenic 55.0%
GAGAAGTGGGAAGAGGTAGG+GGG + chr4_1:86107942-86107961 None:intergenic 55.0%
GGAGAAGTGGGAAGAGGTAG+GGG + chr4_1:86107943-86107962 None:intergenic 55.0%
GTAGAGACTCTGACAGGTGG+AGG + chr4_1:86108057-86108076 None:intergenic 55.0%
GTAAACCCACCTGCAGCCTA+TGG + chr4_1:86108364-86108383 None:intergenic 55.0%
GGGAAGAAGATACCACGACC+TGG + chr4_1:86109254-86109273 None:intergenic 55.0%
GCCATGGCTGTTGCTGAAAG+TGG + chr4_1:86110164-86110183 None:intergenic 55.0%
CATGGCTTCCACAACTTCCG+CGG - chr4_1:86110178-86110197 Msa0580840:intron 55.0%
!! TAATAGCATCGATGCGGCCG+CGG + chr4_1:86110198-86110217 None:intergenic 55.0%
AGTGCTTCTGCATCTCCTGG+TGG - chr4_1:86111010-86111029 Msa0580840:five_prime_UTR 55.0%
TGCACGCGCACATCGTATGG+AGG - chr4_1:86105920-86105939 Msa0580840:intron 60.0%
TGAGGTTGGGGGAGAAGGAG+TGG + chr4_1:86106432-86106451 None:intergenic 60.0%
ATGCAGACTGGGCAGGTTGC+AGG - chr4_1:86109309-86109328 Msa0580840:intron 60.0%
TGCAGACTGGGCAGGTTGCA+GGG - chr4_1:86109310-86109329 Msa0580840:intron 60.0%
CGCGGAAGTTGTGGAAGCCA+TGG + chr4_1:86110180-86110199 None:intergenic 60.0%
CGCGCCAAGTGCACGTTGCA+TGG + chr4_1:86105526-86105545 None:intergenic 65.0%
GTGGGAAGAGGTAGGGGGTC+AGG + chr4_1:86107937-86107956 None:intergenic 65.0%
CGATGCGGCCGCGGAAGTTG+TGG + chr4_1:86110189-86110208 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 86101705 86111057 86101705 ID=Msa0580840;Name=Msa0580840
chr4_1 mRNA 86101705 86111057 86101705 ID=Msa0580840-mRNA-1;Parent=Msa0580840;Name=Msa0580840-mRNA-1;_AED=0.01;_eAED=0.01;_QI=50|1|0.6|1|1|1|5|0|616
chr4_1 exon 86101705 86102670 86101705 ID=Msa0580840-mRNA-1:exon:31816;Parent=Msa0580840-mRNA-1
chr4_1 exon 86107820 86107933 86107820 ID=Msa0580840-mRNA-1:exon:31815;Parent=Msa0580840-mRNA-1
chr4_1 exon 86108208 86108780 86108208 ID=Msa0580840-mRNA-1:exon:31814;Parent=Msa0580840-mRNA-1
chr4_1 exon 86109007 86109081 86109007 ID=Msa0580840-mRNA-1:exon:31813;Parent=Msa0580840-mRNA-1
chr4_1 exon 86110885 86111057 86110885 ID=Msa0580840-mRNA-1:exon:31812;Parent=Msa0580840-mRNA-1
chr4_1 five_prime_UTR 86111008 86111057 86111008 ID=Msa0580840-mRNA-1:five_prime_utr;Parent=Msa0580840-mRNA-1
chr4_1 CDS 86110885 86111007 86110885 ID=Msa0580840-mRNA-1:cds;Parent=Msa0580840-mRNA-1
chr4_1 CDS 86109007 86109081 86109007 ID=Msa0580840-mRNA-1:cds;Parent=Msa0580840-mRNA-1
chr4_1 CDS 86108208 86108780 86108208 ID=Msa0580840-mRNA-1:cds;Parent=Msa0580840-mRNA-1
chr4_1 CDS 86107820 86107933 86107820 ID=Msa0580840-mRNA-1:cds;Parent=Msa0580840-mRNA-1
chr4_1 CDS 86101705 86102670 86101705 ID=Msa0580840-mRNA-1:cds;Parent=Msa0580840-mRNA-1
Gene Sequence

>Msa0580840

ATGGAGTGCAATTCTGGGAGATCTGGTGATGGAGATAGTGAACTCAAGGAAGATAAGAGAAGTGAGCATAGTACTGGTGATGATCATGAAAGTCATCATCAAAAAAAGGAGACTATTGTTGAGGAAGCACCCATTGCTAATACTGAAAGATCAATTGAGGCTGGTCCAAGCACAATATCCTCGCCCAAAAATGATAAGGTTGATGATCAGCTTGAGACAACAAAAGCTCAAATGGGTGAGGTGAGAAAAGAAAATCAACGGTTAAAGATGTGCTTGAACAAAATAATGACCGAATACCGAGCACTGGAAATGCAATTTAACAATATGGTTAAGCAAGAAACAAAAAAGAGCAATGTTGATCACAATGATAATAACCATGAAGAAATAAATGCAGAATCAGATCTTGTTTCCCTCAGCCTTGGAAGAGTTCCTAGTAACAATATTCCAAAAAATGATCAAGAGAAAGTTAACAAAGTGTCTAAACTAGCATTGAATAATGATGAAGAATTCAACAAGGAAGAGTTGTCACTTGGATTGGAATGTAAATTTGAAACATCAAAATCAGGTAGCACAACTGAAGGGTTACCAAATATTCCAAGTCCAGTGAATAGTTCTGAAGTTGTTCCAACAAAGGATGATGAAGTTGTAGAGACTTGGCCACCAAGTAAGACACTCAATAAGACAATGAGAGATGCTGAGGAAGAAGTTGCTCAACAAACTCCTGCAAAGAAAGCTAGGGTTTGTGTTAGAGCAAGATGTGACACCCCAACGATGAATGATGGATGCCAATGGAGAAAGTATGGACAAAAAATTGCAAAGGGAAATCCTTGCCCTCGAGCTTACTATCGTTGCACAGTTGCACCATCATGTCCGGTTAGAAAACAGGTACAAAGATGTGTTGAGGACATGTCTATTCTAATCACAACATACGAAGGGACACACAACCACAGCCTTCCACTTTCAGCAACAGCCATGGCTTCCACAACTTCCGCGGCCGCATCGATGCTATTATCAGGTTCATCAACCTCCAACTCTGGTTCAATGCCATCAGCACAAACCAACAACAATCTTCATGGCCTAAACTTTTATCTACCAGATGGTTCAAAATCAAATCAATTATACCTATCCAACCCTGCACTATCATCTCAACATTCACATCCAACTATCACTCTTGACCTCACTTCAAACCCATCAAATTCTTCAACATCATCGCCCTTTGTTAGATTCAATTCAAGCTACAACAACAATAACCAACTACCAAGATACCCTTCTTCCACTCTTAGCTTTAGTTCTCCTGAATCAAATCCCATGCATTGGAATAGCTTCCTCAATTATGCTACTCCTCAAAATCAACCATATAGTAATAATAGGAACAATAATAATCTAAGCACTTTAAACTTTGGTAGACAAAATACAATGGAAAGTATATACCAAACCTACATGCAAAAAAACAACAATAGTTCAAACATTTCACAACATGTAGGTTTACAAGATAGTACTATATCTGCAGCAACAAAAGCTATCACAGCAGATCCAACTTTTCAATCAGCTTTAGCTGCAGCACTTTCTTCACTTATTGGAAACACTAATCAAGGGAATCAAAATCAAAGTGCAGGAGAAAATTTGAATCAGAAAATGAAATGGGCTGAGATGTTTCAGGTTTCTTCTACTTCATTGCCTTCATCAAGTTCTAAAGTAAATGGTTGTGGTTCAAGTTTCTTGAACAAAACGGCACCAGTGAACAATACACAGAATGGAAGTTTGATGTTGTTATCTCCTTCTTTGCCATTTTCTGCACCTAAAAGTGCTTCTGCATCTCCTGGTGGTGATAATAGTGACAATACCAATTAA
Protein sequence

>Msa0580840

MECNSGRSGDGDSELKEDKRSEHSTGDDHESHHQKKETIVEEAPIANTERSIEAGPSTISSPKNDKVDDQLETTKAQMGEVRKENQRLKMCLNKIMTEYRALEMQFNNMVKQETKKSNVDHNDNNHEEINAESDLVSLSLGRVPSNNIPKNDQEKVNKVSKLALNNDEEFNKEELSLGLECKFETSKSGSTTEGLPNIPSPVNSSEVVPTKDDEVVETWPPSKTLNKTMRDAEEEVAQQTPAKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRKQVQRCVEDMSILITTYEGTHNHSLPLSATAMASTTSAAASMLLSGSSTSNSGSMPSAQTNNNLHGLNFYLPDGSKSNQLYLSNPALSSQHSHPTITLDLTSNPSNSSTSSPFVRFNSSYNNNNQLPRYPSSTLSFSSPESNPMHWNSFLNYATPQNQPYSNNRNNNNLSTLNFGRQNTMESIYQTYMQKNNNSSNISQHVGLQDSTISAATKAITADPTFQSALAAALSSLIGNTNQGNQNQSAGENLNQKMKWAEMFQVSSTSLPSSSSKVNGCGSSFLNKTAPVNNTQNGSLMLLSPSLPFSAPKSASASPGGDNSDNTN*