Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138970 | XP_003591331.1 | 97.521 | 121 | 3 | 0 | 1 | 121 | 1 | 121 | 7.98e-82 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138970 | sp|Q8S925|ATG8H_ARATH | 69.027 | 113 | 35 | 0 | 6 | 118 | 7 | 119 | 8.45e-56 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138970 | G7IBT1 | 97.521 | 121 | 3 | 0 | 1 | 121 | 1 | 121 | 3.81e-82 | 245 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0138970 | 0.852753 | 3.753285e-61 | -8.615850e-47 |
| Msa0000550 | Msa0138970 | 0.843713 | 1.183217e-58 | -8.615850e-47 |
| Msa0001950 | Msa0138970 | -0.810950 | 8.930718e-51 | -8.615850e-47 |
| Msa0005000 | Msa0138970 | 0.802914 | 4.474864e-49 | -8.615850e-47 |
| Msa0011850 | Msa0138970 | -0.827031 | 1.958473e-54 | -8.615850e-47 |
| Msa0024680 | Msa0138970 | -0.853953 | 1.698872e-61 | -8.615850e-47 |
| Msa0027540 | Msa0138970 | -0.807760 | 4.317824e-50 | -8.615850e-47 |
| Msa0028060 | Msa0138970 | -0.811359 | 7.284656e-51 | -8.615850e-47 |
| Msa0029540 | Msa0138970 | 0.984782 | 1.426774e-161 | -8.615850e-47 |
| Msa0030310 | Msa0138970 | -0.827199 | 1.784545e-54 | -8.615850e-47 |
| Msa0032370 | Msa0138970 | -0.852653 | 4.009408e-61 | -8.615850e-47 |
| Msa0032840 | Msa0138970 | 0.812424 | 4.269393e-51 | -8.615850e-47 |
| Msa0041620 | Msa0138970 | -0.818008 | 2.451819e-52 | -8.615850e-47 |
| Msa0050730 | Msa0138970 | -0.802318 | 5.938909e-49 | -8.615850e-47 |
| Msa0051430 | Msa0138970 | 0.803520 | 3.352694e-49 | -8.615850e-47 |
| Msa0067360 | Msa0138970 | -0.808127 | 3.607233e-50 | -8.615850e-47 |
| Msa0069260 | Msa0138970 | -0.834538 | 2.829479e-56 | -8.615850e-47 |
| Msa0069280 | Msa0138970 | -0.826997 | 1.994897e-54 | -8.615850e-47 |
| Msa0069310 | Msa0138970 | -0.830319 | 3.139359e-55 | -8.615850e-47 |
| Msa0075310 | Msa0138970 | -0.810767 | 9.787811e-51 | -8.615850e-47 |
| Msa0094010 | Msa0138970 | -0.825305 | 5.041196e-54 | -8.615850e-47 |
| Msa0095380 | Msa0138970 | -0.806093 | 9.724324e-50 | -8.615850e-47 |
| Msa0096670 | Msa0138970 | -0.837542 | 4.887827e-57 | -8.615850e-47 |
| Msa0098390 | Msa0138970 | 0.808331 | 3.264490e-50 | -8.615850e-47 |
| Msa0099510 | Msa0138970 | -0.814293 | 1.658981e-51 | -8.615850e-47 |
| Msa0101810 | Msa0138970 | 0.801877 | 7.316583e-49 | -8.615850e-47 |
| Msa0102750 | Msa0138970 | -0.842104 | 3.169268e-58 | -8.615850e-47 |
| Msa0104610 | Msa0138970 | -0.815257 | 1.014452e-51 | -8.615850e-47 |
| Msa0105420 | Msa0138970 | -0.863134 | 3.091838e-64 | -8.615850e-47 |
| Msa0114540 | Msa0138970 | 0.829593 | 4.719951e-55 | -8.615850e-47 |
| Msa0115830 | Msa0138970 | -0.806676 | 7.327948e-50 | -8.615850e-47 |
| Msa0120330 | Msa0138970 | -0.860955 | 1.439952e-63 | -8.615850e-47 |
| Msa0124340 | Msa0138970 | -0.802169 | 6.374368e-49 | -8.615850e-47 |
| Msa0125370 | Msa0138970 | 0.804541 | 2.055845e-49 | -8.615850e-47 |
| Msa0138970 | Msa0141830 | -0.800502 | 1.398564e-48 | -8.615850e-47 |
| Msa0138970 | Msa0142470 | -0.818337 | 2.066560e-52 | -8.615850e-47 |
| Msa0138970 | Msa0143080 | -0.836763 | 7.731982e-57 | -8.615850e-47 |
| Msa0138970 | Msa0143240 | 0.831069 | 2.056982e-55 | -8.615850e-47 |
| Msa0138970 | Msa0145950 | -0.830415 | 2.974355e-55 | -8.615850e-47 |
| Msa0138970 | Msa0145980 | 0.824995 | 5.967001e-54 | -8.615850e-47 |
| Msa0138970 | Msa0152840 | -0.810167 | 1.318682e-50 | -8.615850e-47 |
| Msa0138970 | Msa0156650 | 0.846073 | 2.730836e-59 | -8.615850e-47 |
| Msa0138970 | Msa0168100 | -0.828481 | 8.778430e-55 | -8.615850e-47 |
| Msa0138970 | Msa0168640 | 0.825660 | 4.153532e-54 | -8.615850e-47 |
| Msa0138970 | Msa0172350 | -0.893190 | 7.912155e-75 | -8.615850e-47 |
| Msa0138970 | Msa0185270 | -0.814302 | 1.651447e-51 | -8.615850e-47 |
| Msa0138970 | Msa0189950 | -0.817652 | 2.950992e-52 | -8.615850e-47 |
| Msa0138970 | Msa0193650 | -0.818855 | 1.576355e-52 | -8.615850e-47 |
| Msa0138970 | Msa0194970 | -0.829281 | 5.621087e-55 | -8.615850e-47 |
| Msa0138970 | Msa0196020 | 0.848878 | 4.629331e-60 | -8.615850e-47 |
| Msa0138970 | Msa0196130 | 0.807667 | 4.519244e-50 | -8.615850e-47 |
| Msa0138970 | Msa0200950 | 0.833419 | 5.390916e-56 | -8.615850e-47 |
| Msa0138970 | Msa0212750 | 0.803021 | 4.252595e-49 | -8.615850e-47 |
| Msa0138970 | Msa0215320 | 0.804483 | 2.113837e-49 | -8.615850e-47 |
| Msa0138970 | Msa0222920 | -0.879563 | 1.125005e-69 | -8.615850e-47 |
| Msa0138970 | Msa0223290 | -0.801525 | 8.643033e-49 | -8.615850e-47 |
| Msa0138970 | Msa0227400 | -0.810369 | 1.192594e-50 | -8.615850e-47 |
| Msa0138970 | Msa0227510 | -0.813958 | 1.966327e-51 | -8.615850e-47 |
| Msa0138970 | Msa0230550 | 0.805187 | 1.506553e-49 | -8.615850e-47 |
| Msa0138970 | Msa0236980 | -0.835447 | 1.669059e-56 | -8.615850e-47 |
| Msa0138970 | Msa0242680 | -0.801733 | 7.835097e-49 | -8.615850e-47 |
| Msa0138970 | Msa0258670 | 0.821507 | 3.891600e-53 | -8.615850e-47 |
| Msa0138970 | Msa0259560 | -0.832040 | 1.185848e-55 | -8.615850e-47 |
| Msa0138970 | Msa0260820 | 0.872819 | 2.372574e-67 | -8.615850e-47 |
| Msa0138970 | Msa0264350 | -0.850019 | 2.225640e-60 | -8.615850e-47 |
| Msa0138970 | Msa0267760 | -0.887667 | 1.167177e-72 | -8.615850e-47 |
| Msa0138970 | Msa0272480 | 0.810995 | 8.736531e-51 | -8.615850e-47 |
| Msa0138970 | Msa0275030 | -0.820171 | 7.898321e-53 | -8.615850e-47 |
| Msa0138970 | Msa0275400 | 0.868310 | 7.180919e-66 | -8.615850e-47 |
| Msa0138970 | Msa0288240 | -0.808259 | 3.381579e-50 | -8.615850e-47 |
| Msa0138970 | Msa0288330 | -0.801496 | 8.762003e-49 | -8.615850e-47 |
| Msa0138970 | Msa0294560 | 0.805699 | 1.177005e-49 | -8.615850e-47 |
| Msa0138970 | Msa0295000 | 0.827760 | 1.309031e-54 | -8.615850e-47 |
| Msa0138970 | Msa0302450 | -0.861165 | 1.242546e-63 | -8.615850e-47 |
| Msa0138970 | Msa0307110 | -0.818681 | 1.726871e-52 | -8.615850e-47 |
| Msa0138970 | Msa0312750 | 0.825500 | 4.532347e-54 | -8.615850e-47 |
| Msa0138970 | Msa0313990 | -0.821578 | 3.748401e-53 | -8.615850e-47 |
| Msa0138970 | Msa0316850 | -0.816657 | 4.939289e-52 | -8.615850e-47 |
| Msa0138970 | Msa0320100 | -0.804657 | 1.944536e-49 | -8.615850e-47 |
| Msa0138970 | Msa0326670 | -0.821684 | 3.543082e-53 | -8.615850e-47 |
| Msa0138970 | Msa0328210 | -0.840843 | 6.812348e-58 | -8.615850e-47 |
| Msa0138970 | Msa0356890 | 0.821345 | 4.242618e-53 | -8.615850e-47 |
| Msa0138970 | Msa0374250 | -0.841754 | 3.923323e-58 | -8.615850e-47 |
| Msa0138970 | Msa0377530 | -0.801527 | 8.632764e-49 | -8.615850e-47 |
| Msa0138970 | Msa0393680 | -0.800404 | 1.464688e-48 | -8.615850e-47 |
| Msa0138970 | Msa0393950 | -0.800152 | 1.647676e-48 | -8.615850e-47 |
| Msa0138970 | Msa0414950 | 0.852319 | 4.992297e-61 | -8.615850e-47 |
| Msa0138970 | Msa0421780 | 0.830235 | 3.291562e-55 | -8.615850e-47 |
| Msa0138970 | Msa0423360 | 0.867024 | 1.855818e-65 | -8.615850e-47 |
| Msa0138970 | Msa0425940 | -0.807967 | 3.902505e-50 | -8.615850e-47 |
| Msa0138970 | Msa0429520 | 0.830967 | 2.179075e-55 | -8.615850e-47 |
| Msa0138970 | Msa0436280 | 0.873333 | 1.595364e-67 | -8.615850e-47 |
| Msa0138970 | Msa0437510 | -0.827635 | 1.403442e-54 | -8.615850e-47 |
| Msa0138970 | Msa0437710 | -0.809820 | 1.566677e-50 | -8.615850e-47 |
| Msa0138970 | Msa0441800 | -0.810484 | 1.126532e-50 | -8.615850e-47 |
| Msa0138970 | Msa0467900 | 0.836934 | 6.992750e-57 | -8.615850e-47 |
| Msa0138970 | Msa0467960 | 0.840808 | 6.954776e-58 | -8.615850e-47 |
| Msa0138970 | Msa0469790 | -0.839499 | 1.527415e-57 | -8.615850e-47 |
| Msa0138970 | Msa0469820 | -0.830553 | 2.753153e-55 | -8.615850e-47 |
| Msa0138970 | Msa0469910 | 0.869724 | 2.497933e-66 | -8.615850e-47 |
| Msa0138970 | Msa0473240 | -0.800840 | 1.193434e-48 | -8.615850e-47 |
| Msa0138970 | Msa0480320 | -0.816636 | 4.993771e-52 | -8.615850e-47 |
| Msa0138970 | Msa0482680 | -0.826296 | 2.932497e-54 | -8.615850e-47 |
| Msa0138970 | Msa0490300 | -0.801840 | 7.446465e-49 | -8.615850e-47 |
| Msa0138970 | Msa0490350 | -0.806976 | 6.333149e-50 | -8.615850e-47 |
| Msa0138970 | Msa0505060 | -0.805838 | 1.100438e-49 | -8.615850e-47 |
| Msa0138970 | Msa0508200 | -0.817805 | 2.726150e-52 | -8.615850e-47 |
| Msa0138970 | Msa0509970 | -0.808886 | 2.484579e-50 | -8.615850e-47 |
| Msa0138970 | Msa0517490 | -0.803123 | 4.051676e-49 | -8.615850e-47 |
| Msa0138970 | Msa0521310 | -0.854858 | 9.303830e-62 | -8.615850e-47 |
| Msa0138970 | Msa0525340 | -0.821238 | 4.490826e-53 | -8.615850e-47 |
| Msa0138970 | Msa0526640 | 0.805219 | 1.483858e-49 | -8.615850e-47 |
| Msa0138970 | Msa0526700 | -0.841860 | 3.677433e-58 | -8.615850e-47 |
| Msa0138970 | Msa0526710 | -0.886000 | 5.001627e-72 | -8.615850e-47 |
| Msa0138970 | Msa0527590 | -0.819659 | 1.034106e-52 | -8.615850e-47 |
| Msa0138970 | Msa0529950 | -0.810238 | 1.273374e-50 | -8.615850e-47 |
| Msa0138970 | Msa0531990 | 0.800081 | 1.703352e-48 | -8.615850e-47 |
| Msa0138970 | Msa0532100 | 0.808913 | 2.452067e-50 | -8.615850e-47 |
| Msa0138970 | Msa0532120 | 0.802785 | 4.756778e-49 | -8.615850e-47 |
| Msa0138970 | Msa0532550 | -0.840541 | 8.170052e-58 | -8.615850e-47 |
| Msa0138970 | Msa0535030 | -0.844503 | 7.262642e-59 | -8.615850e-47 |
| Msa0138970 | Msa0535060 | -0.844990 | 5.366613e-59 | -8.615850e-47 |
| Msa0138970 | Msa0535450 | -0.826064 | 3.329937e-54 | -8.615850e-47 |
| Msa0138970 | Msa0542160 | -0.819551 | 1.094230e-52 | -8.615850e-47 |
| Msa0138970 | Msa0546380 | -0.827982 | 1.157745e-54 | -8.615850e-47 |
| Msa0138970 | Msa0553220 | 0.809086 | 2.250743e-50 | -8.615850e-47 |
| Msa0138970 | Msa0560470 | -0.806298 | 8.804035e-50 | -8.615850e-47 |
| Msa0138970 | Msa0574760 | 0.851166 | 1.059152e-60 | -8.615850e-47 |
| Msa0138970 | Msa0575990 | 0.830362 | 3.064248e-55 | -8.615850e-47 |
| Msa0138970 | Msa0576100 | 0.837194 | 6.002657e-57 | -8.615850e-47 |
| Msa0138970 | Msa0576980 | -0.801455 | 8.930221e-49 | -8.615850e-47 |
| Msa0138970 | Msa0578090 | -0.807357 | 5.257259e-50 | -8.615850e-47 |
| Msa0138970 | Msa0583940 | -0.805993 | 1.020760e-49 | -8.615850e-47 |
| Msa0138970 | Msa0586850 | -0.810982 | 8.790988e-51 | -8.615850e-47 |
| Msa0138970 | Msa0590680 | -0.808734 | 2.677794e-50 | -8.615850e-47 |
| Msa0138970 | Msa0591770 | -0.838324 | 3.077300e-57 | -8.615850e-47 |
| Msa0138970 | Msa0604360 | -0.806965 | 6.367637e-50 | -8.615850e-47 |
| Msa0138970 | Msa0607290 | 0.822482 | 2.313614e-53 | -8.615850e-47 |
| Msa0138970 | Msa0619470 | -0.833166 | 6.233651e-56 | -8.615850e-47 |
| Msa0138970 | Msa0619510 | -0.831226 | 1.882496e-55 | -8.615850e-47 |
| Msa0138970 | Msa0628890 | -0.801742 | 7.798746e-49 | -8.615850e-47 |
| Msa0138970 | Msa0638280 | -0.807054 | 6.096738e-50 | -8.615850e-47 |
| Msa0138970 | Msa0638320 | -0.810835 | 9.461164e-51 | -8.615850e-47 |
| Msa0138970 | Msa0638340 | -0.801259 | 9.797082e-49 | -8.615850e-47 |
| Msa0138970 | Msa0638690 | -0.820376 | 7.086424e-53 | -8.615850e-47 |
| Msa0138970 | Msa0639120 | -0.812278 | 4.594840e-51 | -8.615850e-47 |
| Msa0138970 | Msa0642650 | -0.823044 | 1.712346e-53 | -8.615850e-47 |
| Msa0138970 | Msa0648520 | -0.812285 | 4.577421e-51 | -8.615850e-47 |
| Msa0138970 | Msa0648640 | 0.805260 | 1.454416e-49 | -8.615850e-47 |
| Msa0138970 | Msa0659600 | -0.816060 | 6.716783e-52 | -8.615850e-47 |
| Msa0138970 | Msa0664760 | -0.820942 | 5.253058e-53 | -8.615850e-47 |
| Msa0138970 | Msa0669850 | -0.859323 | 4.479060e-63 | -8.615850e-47 |
| Msa0138970 | Msa0670980 | -0.822792 | 1.959852e-53 | -8.615850e-47 |
| Msa0138970 | Msa0677270 | -0.811388 | 7.179670e-51 | -8.615850e-47 |
| Msa0138970 | Msa0681890 | -0.802882 | 4.544004e-49 | -8.615850e-47 |
| Msa0138970 | Msa0684500 | -0.819347 | 1.218388e-52 | -8.615850e-47 |
| Msa0138970 | Msa0691050 | -0.830483 | 2.862598e-55 | -8.615850e-47 |
| Msa0138970 | Msa0701860 | 0.813692 | 2.250218e-51 | -8.615850e-47 |
| Msa0138970 | Msa0703590 | -0.840036 | 1.107053e-57 | -8.615850e-47 |
| Msa0138970 | Msa0709190 | -0.842146 | 3.089524e-58 | -8.615850e-47 |
| Msa0138970 | Msa0724580 | -0.805333 | 1.404063e-49 | -8.615850e-47 |
| Msa0138970 | Msa0735620 | 0.825526 | 4.467432e-54 | -8.615850e-47 |
| Msa0138970 | Msa0743680 | -0.846235 | 2.466732e-59 | -8.615850e-47 |
| Msa0138970 | Msa0754720 | 0.888913 | 3.869553e-73 | -8.615850e-47 |
| Msa0138970 | Msa0756630 | 0.852762 | 3.731588e-61 | -8.615850e-47 |
| Msa0138970 | Msa0757450 | 0.834888 | 2.310108e-56 | -8.615850e-47 |
| Msa0138970 | Msa0757500 | 0.834160 | 3.519814e-56 | -8.615850e-47 |
| Msa0138970 | Msa0777570 | 0.812559 | 3.989444e-51 | -8.615850e-47 |
| Msa0138970 | Msa0784620 | -0.829770 | 4.275320e-55 | -8.615850e-47 |
| Msa0138970 | Msa0798810 | 0.818191 | 2.229434e-52 | -8.615850e-47 |
| Msa0138970 | Msa0804680 | -0.800255 | 1.570469e-48 | -8.615850e-47 |
| Msa0138970 | Msa0814630 | 0.825093 | 5.656592e-54 | -8.615850e-47 |
| Msa0138970 | Msa0824730 | -0.821925 | 3.114773e-53 | -8.615850e-47 |
| Msa0138970 | Msa0837350 | 0.816453 | 5.487279e-52 | -8.615850e-47 |
| Msa0138970 | Msa0852730 | -0.811968 | 5.369901e-51 | -8.615850e-47 |
| Msa0138970 | Msa0855160 | 0.833664 | 4.684668e-56 | -8.615850e-47 |
| Msa0138970 | Msa0863370 | -0.806551 | 7.785789e-50 | -8.615850e-47 |
| Msa0138970 | Msa0863800 | -0.842178 | 3.030806e-58 | -8.615850e-47 |
| Msa0138970 | Msa0881480 | -0.819608 | 1.062118e-52 | -8.615850e-47 |
| Msa0138970 | Msa0890250 | -0.816002 | 6.920882e-52 | -8.615850e-47 |
| Msa0138970 | Msa0893810 | -0.800218 | 1.597575e-48 | -8.615850e-47 |
| Msa0138970 | Msa0896220 | -0.815212 | 1.037790e-51 | -8.615850e-47 |
| Msa0138970 | Msa0907700 | -0.827927 | 1.193717e-54 | -8.615850e-47 |
| Msa0138970 | Msa0908170 | -0.829008 | 6.546574e-55 | -8.615850e-47 |
| Msa0138970 | Msa0922540 | -0.832380 | 9.770118e-56 | -8.615850e-47 |
| Msa0138970 | Msa0925160 | -0.807893 | 4.045858e-50 | -8.615850e-47 |
| Msa0138970 | Msa0930910 | 0.861940 | 7.207409e-64 | -8.615850e-47 |
| Msa0138970 | Msa0933440 | -0.826229 | 3.042636e-54 | -8.615850e-47 |
| Msa0138970 | Msa0947530 | 0.835079 | 2.067233e-56 | -8.615850e-47 |
| Msa0138970 | Msa0959010 | -0.839742 | 1.321146e-57 | -8.615850e-47 |
| Msa0138970 | Msa0966420 | -0.818230 | 2.184927e-52 | -8.615850e-47 |
| Msa0138970 | Msa0990520 | -0.806540 | 7.826554e-50 | -8.615850e-47 |
| Msa0138970 | Msa0993530 | -0.849536 | 3.035526e-60 | -8.615850e-47 |
| Msa0138970 | Msa0996080 | -0.821186 | 4.615627e-53 | -8.615850e-47 |
| Msa0138970 | Msa1000300 | -0.831259 | 1.847377e-55 | -8.615850e-47 |
| Msa0138970 | Msa1004900 | 0.821055 | 4.947778e-53 | -8.615850e-47 |
| Msa0138970 | Msa1007610 | 0.815575 | 8.616843e-52 | -8.615850e-47 |
| Msa0138970 | Msa1015060 | -0.823027 | 1.727213e-53 | -8.615850e-47 |
| Msa0138970 | Msa1022970 | -0.800464 | 1.423578e-48 | -8.615850e-47 |
| Msa0138970 | Msa1037000 | -0.811472 | 6.881690e-51 | -8.615850e-47 |
| Msa0138970 | Msa1037650 | 0.811440 | 6.992509e-51 | -8.615850e-47 |
| Msa0138970 | Msa1037700 | 0.813041 | 3.128160e-51 | -8.615850e-47 |
| Msa0138970 | Msa1040120 | -0.843650 | 1.230011e-58 | -8.615850e-47 |
| Msa0138970 | Msa1044340 | -0.846238 | 2.463100e-59 | -8.615850e-47 |
| Msa0138970 | Msa1054240 | -0.815991 | 6.960670e-52 | -8.615850e-47 |
| Msa0138970 | Msa1058760 | -0.818823 | 1.602732e-52 | -8.615850e-47 |
| Msa0138970 | Msa1067440 | 0.802521 | 5.393592e-49 | -8.615850e-47 |
| Msa0138970 | Msa1069660 | 0.842375 | 2.686912e-58 | -8.615850e-47 |
| Msa0138970 | Msa1072460 | 0.825083 | 5.687679e-54 | -8.615850e-47 |
| Msa0138970 | Msa1079370 | 0.800614 | 1.326882e-48 | -8.615850e-47 |
| Msa0138970 | Msa1092820 | -0.820444 | 6.836380e-53 | -8.615850e-47 |
| Msa0138970 | Msa1115330 | -0.807444 | 5.040944e-50 | -8.615850e-47 |
| Msa0138970 | Msa1126120 | 0.805267 | 1.450006e-49 | -8.615850e-47 |
| Msa0138970 | Msa1130210 | 0.842817 | 2.050682e-58 | -8.615850e-47 |
| Msa0138970 | Msa1130270 | 0.837423 | 5.244050e-57 | -8.615850e-47 |
| Msa0138970 | Msa1132520 | -0.841674 | 4.118535e-58 | -8.615850e-47 |
| Msa0138970 | Msa1143620 | -0.814602 | 1.417437e-51 | -8.615850e-47 |
| Msa0138970 | Msa1157690 | -0.801011 | 1.101006e-48 | -8.615850e-47 |
| Msa0138970 | Msa1193950 | 0.831793 | 1.364814e-55 | -8.615850e-47 |
| Msa0138970 | Msa1208890 | 0.808319 | 3.282708e-50 | -8.615850e-47 |
| Msa0138970 | Msa1212380 | -0.802596 | 5.203511e-49 | -8.615850e-47 |
| Msa0138970 | Msa1214880 | -0.804360 | 2.242828e-49 | -8.615850e-47 |
| Msa0138970 | Msa1217860 | -0.847884 | 8.717143e-60 | -8.615850e-47 |
| Msa0138970 | Msa1221900 | -0.818082 | 2.360360e-52 | -8.615850e-47 |
| Msa0138970 | Msa1226510 | -0.822720 | 2.036734e-53 | -8.615850e-47 |
| Msa0138970 | Msa1236070 | 0.823389 | 1.422211e-53 | -8.615850e-47 |
| Msa0138970 | Msa1237030 | -0.839562 | 1.471392e-57 | -8.615850e-47 |
| Msa0138970 | Msa1244750 | 0.806809 | 6.867203e-50 | -8.615850e-47 |
| Msa0138970 | Msa1246530 | 0.824118 | 9.597164e-54 | -8.615850e-47 |
| Msa0138970 | Msa1249920 | -0.833665 | 4.680136e-56 | -8.615850e-47 |
| Msa0138970 | Msa1259070 | 0.804773 | 1.839184e-49 | -8.615850e-47 |
| Msa0138970 | Msa1262960 | -0.819667 | 1.029582e-52 | -8.615850e-47 |
| Msa0138970 | Msa1265070 | -0.816056 | 6.730735e-52 | -8.615850e-47 |
| Msa0138970 | Msa1265960 | -0.811819 | 5.784351e-51 | -8.615850e-47 |
| Msa0138970 | Msa1269580 | 0.874955 | 4.505767e-68 | -8.615850e-47 |
| Msa0138970 | Msa1300860 | -0.833029 | 6.743816e-56 | -8.615850e-47 |
| Msa0138970 | Msa1302060 | -0.817165 | 3.799256e-52 | -8.615850e-47 |
| Msa0138970 | Msa1311960 | -0.807477 | 4.960408e-50 | -8.615850e-47 |
| Msa0138970 | Msa1331920 | -0.805857 | 1.090041e-49 | -8.615850e-47 |
| Msa0138970 | Msa1337730 | -0.847130 | 1.405182e-59 | -8.615850e-47 |
| Msa0138970 | Msa1360890 | 0.872669 | 2.662872e-67 | -8.615850e-47 |
| Msa0138970 | Msa1362510 | -0.849427 | 3.257502e-60 | -8.615850e-47 |
| Msa0138970 | Msa1364470 | 0.812046 | 5.162024e-51 | -8.615850e-47 |
| Msa0138970 | Msa1373510 | -0.847754 | 9.467156e-60 | -8.615850e-47 |
| Msa0138970 | Msa1382310 | -0.838438 | 2.875488e-57 | -8.615850e-47 |
| Msa0138970 | Msa1390120 | -0.839910 | 1.194251e-57 | -8.615850e-47 |
| Msa0138970 | Msa1390230 | -0.819259 | 1.275967e-52 | -8.615850e-47 |
| Msa0138970 | Msa1390310 | -0.886711 | 2.697182e-72 | -8.615850e-47 |
| Msa0138970 | Msa1390770 | -0.827492 | 1.518860e-54 | -8.615850e-47 |
| Msa0138970 | Msa1395530 | -0.843612 | 1.258854e-58 | -8.615850e-47 |
| Msa0138970 | Msa1398860 | -0.814292 | 1.659619e-51 | -8.615850e-47 |
| Msa0138970 | Msa1400610 | 0.804717 | 1.888847e-49 | -8.615850e-47 |
| Msa0138970 | Msa1403930 | 0.826019 | 3.413600e-54 | -8.615850e-47 |
| Msa0138970 | Msa1404540 | -0.808516 | 2.980691e-50 | -8.615850e-47 |
| Msa0138970 | Msa1408760 | 0.805622 | 1.221535e-49 | -8.615850e-47 |
| Msa0138970 | Msa1410760 | 0.802045 | 6.759073e-49 | -8.615850e-47 |
| Msa0138970 | Msa1412140 | -0.805011 | 1.639855e-49 | -8.615850e-47 |
| Msa0138970 | Msa1429360 | 0.868817 | 4.922899e-66 | -8.615850e-47 |
| Msa0138970 | Msa1431000 | -0.812743 | 3.635281e-51 | -8.615850e-47 |
| Msa0138970 | Msa1431060 | -0.806682 | 7.305544e-50 | -8.615850e-47 |
| Msa0138970 | Msa1432640 | -0.806953 | 6.402433e-50 | -8.615850e-47 |
| Msa0138970 | Msa1439960 | -0.856741 | 2.621485e-62 | -8.615850e-47 |
| Msa0138970 | Msa1442220 | 0.873488 | 1.414982e-67 | -8.615850e-47 |
| Msa0138970 | Msa1447110 | -0.805199 | 1.498151e-49 | -8.615850e-47 |
| Msa0138970 | Msa1449910 | -0.824488 | 7.856617e-54 | -8.615850e-47 |
| Msa0138970 | Msa1454750 | -0.819136 | 1.360964e-52 | -8.615850e-47 |
| Msa0138970 | Msa1456650 | -0.810013 | 1.423133e-50 | -8.615850e-47 |
| Msa0138970 | Msa1459390 | -0.826523 | 2.588774e-54 | -8.615850e-47 |
| Msa0138970 | Msa1463970 | -0.814879 | 1.230141e-51 | -8.615850e-47 |
| Msa0138970 | Msa1466460 | -0.800365 | 1.491680e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138970 | MtrunA17_Chr1g0194141 | 97.521 | 121 | 3 | 0 | 1 | 121 | 1 | 121 | 7.34e-86 | 245 |
| Msa0138970 | MtrunA17_Chr7g0260981 | 67.797 | 118 | 38 | 0 | 1 | 118 | 1 | 118 | 1.73e-59 | 179 |
| Msa0138970 | MtrunA17_Chr4g0069171 | 68.644 | 118 | 37 | 0 | 1 | 118 | 1 | 118 | 2.20e-59 | 178 |
| Msa0138970 | MtrunA17_Chr2g0288531 | 54.310 | 116 | 53 | 0 | 5 | 120 | 4 | 119 | 1.52e-43 | 138 |
| Msa0138970 | MtrunA17_Chr4g0024721 | 54.310 | 116 | 53 | 0 | 3 | 118 | 2 | 117 | 1.59e-43 | 138 |
| Msa0138970 | MtrunA17_Chr2g0322571 | 55.263 | 114 | 51 | 0 | 5 | 118 | 4 | 117 | 2.70e-42 | 135 |
| Msa0138970 | MtrunA17_Chr4g0056301 | 52.586 | 116 | 55 | 0 | 5 | 120 | 4 | 119 | 2.43e-41 | 133 |
| Msa0138970 | MtrunA17_Chr4g0019141 | 45.536 | 112 | 59 | 2 | 6 | 115 | 5 | 116 | 6.19e-27 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0138970 | AT3G06420.1 | 69.027 | 113 | 35 | 0 | 6 | 118 | 7 | 119 | 8.59e-57 | 172 |
| Msa0138970 | AT3G15580.1 | 70.536 | 112 | 33 | 0 | 7 | 118 | 4 | 115 | 1.15e-56 | 172 |
| Msa0138970 | AT4G21980.1 | 57.265 | 117 | 50 | 0 | 5 | 121 | 4 | 120 | 5.00e-45 | 142 |
| Msa0138970 | AT4G21980.2 | 57.265 | 117 | 50 | 0 | 5 | 121 | 19 | 135 | 1.19e-44 | 142 |
| Msa0138970 | AT1G62040.1 | 56.897 | 116 | 50 | 0 | 3 | 118 | 2 | 117 | 2.21e-44 | 140 |
| Msa0138970 | AT2G45170.2 | 53.719 | 121 | 56 | 0 | 1 | 121 | 1 | 121 | 3.29e-44 | 140 |
| Msa0138970 | AT2G45170.1 | 53.719 | 121 | 56 | 0 | 1 | 121 | 1 | 121 | 3.29e-44 | 140 |
| Msa0138970 | AT4G04620.3 | 53.448 | 116 | 54 | 0 | 5 | 120 | 4 | 119 | 2.73e-42 | 135 |
| Msa0138970 | AT4G04620.2 | 53.448 | 116 | 54 | 0 | 5 | 120 | 4 | 119 | 2.73e-42 | 135 |
| Msa0138970 | AT4G04620.1 | 53.448 | 116 | 54 | 0 | 5 | 120 | 4 | 119 | 2.73e-42 | 135 |
| Msa0138970 | AT2G05630.1 | 53.509 | 114 | 53 | 0 | 5 | 118 | 4 | 117 | 6.18e-42 | 134 |
| Msa0138970 | AT4G16520.2 | 54.386 | 114 | 52 | 0 | 5 | 118 | 4 | 117 | 1.46e-41 | 134 |
| Msa0138970 | AT4G16520.1 | 54.386 | 114 | 52 | 0 | 5 | 118 | 4 | 117 | 1.46e-41 | 134 |
| Msa0138970 | AT3G60640.1 | 52.174 | 115 | 55 | 0 | 6 | 120 | 5 | 119 | 5.32e-41 | 132 |
| Msa0138970 | AT2G05630.2 | 52.778 | 108 | 51 | 0 | 11 | 118 | 54 | 161 | 1.39e-38 | 127 |
| Msa0138970 | AT4G16520.3 | 55.682 | 88 | 39 | 0 | 31 | 118 | 30 | 117 | 1.06e-30 | 106 |
| Msa0138970 | AT1G62040.2 | 52.688 | 93 | 44 | 0 | 3 | 95 | 2 | 94 | 1.61e-29 | 102 |
Find 35 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGGATTCGATCGGGGTATT+TGG | 0.168599 | 1_3:-72198999 | None:intergenic |
| ATGAATAAGAATGCAATAAT+TGG | 0.305135 | 1_3:-72199679 | None:intergenic |
| TACCAAACGTAAACTCGTTC+TGG | 0.338661 | 1_3:-72198862 | None:intergenic |
| TCCAGCTGGTAAATTAAGTC+TGG | 0.354424 | 1_3:-72199323 | None:intergenic |
| CAAATGCGATCTGCCTCATT+TGG | 0.355422 | 1_3:+72199130 | Msa0138970:CDS |
| ATGTATAACATTGAACCATT+TGG | 0.355581 | 1_3:+72199714 | Msa0138970:three_prime_UTR |
| TGTATAACATTGAACCATTT+GGG | 0.369658 | 1_3:+72199715 | Msa0138970:three_prime_UTR |
| AAGAATACTTTACCTCAAAC+TGG | 0.387404 | 1_3:+72199367 | Msa0138970:CDS |
| GGACTTACGGGGATTCGATC+GGG | 0.390336 | 1_3:-72199007 | None:intergenic |
| ATATTTGTTGTATTGTTGTA+TGG | 0.397542 | 1_3:+72199648 | Msa0138970:three_prime_UTR |
| CAAATTCATAATAGCCCAAA+TGG | 0.408070 | 1_3:-72199729 | None:intergenic |
| TATAGCACTGAGAAAACCTT+TGG | 0.412532 | 1_3:+72199546 | Msa0138970:CDS |
| CATGATCATTGATGATGTAT+AGG | 0.421743 | 1_3:+72199758 | Msa0138970:three_prime_UTR |
| TGCTATTGCAGCTAGTATGA+TGG | 0.424492 | 1_3:+72199473 | Msa0138970:intron |
| GCAAGTTTATTACCAGTTTG+AGG | 0.425620 | 1_3:-72199379 | None:intergenic |
| CAAATGAGGCAGATCGCATT+TGG | 0.427187 | 1_3:-72199129 | None:intergenic |
| CAATACAACAAATATTTACA+AGG | 0.439972 | 1_3:-72199640 | None:intergenic |
| AATAGTTGACATTTATGTAC+AGG | 0.446245 | 1_3:-72199571 | None:intergenic |
| TCCAGACTTAATTTACCAGC+TGG | 0.456823 | 1_3:+72199322 | Msa0138970:CDS |
| TCTTCTTCTTCAGGTGATTG+TGG | 0.457646 | 1_3:+72199097 | Msa0138970:intron |
| CTCTGTTTATAGATCATTCA+AGG | 0.464700 | 1_3:+72199497 | Msa0138970:CDS |
| TTCCAGAACGAGTTTACGTT+TGG | 0.466165 | 1_3:+72198860 | Msa0138970:CDS |
| ACAAGGTTTCTGATATAAGA+AGG | 0.484325 | 1_3:-72199623 | None:intergenic |
| TAGCAAGACAAGAGTTGCTC+TGG | 0.491262 | 1_3:-72198803 | None:intergenic |
| GGGACTTACGGGGATTCGAT+CGG | 0.493031 | 1_3:-72199008 | None:intergenic |
| ACATTAATCAACAAGGATGT+AGG | 0.509610 | 1_3:-72199823 | None:intergenic |
| CTTTGTTACATTAATCAACA+AGG | 0.538506 | 1_3:-72199830 | None:intergenic |
| TTATAGATCATTCAAGGATG+AGG | 0.555700 | 1_3:+72199503 | Msa0138970:CDS |
| AGATCATTCAAGGATGAGGA+TGG | 0.557576 | 1_3:+72199507 | Msa0138970:CDS |
| CATTTATGTACAGGATCCAA+AGG | 0.566947 | 1_3:-72199562 | None:intergenic |
| GTTCCACGAGACTTGTCAGT+TGG | 0.569472 | 1_3:+72199277 | Msa0138970:CDS |
| AATAAGAATGCAATAATTGG+TGG | 0.588342 | 1_3:-72199676 | None:intergenic |
| GACTTACGGGGATTCGATCG+GGG | 0.607489 | 1_3:-72199006 | None:intergenic |
| TTTCTGATATAAGAAGGTAG+TGG | 0.639447 | 1_3:-72199617 | None:intergenic |
| TGTCCAACTGACAAGTCTCG+TGG | 0.654531 | 1_3:-72199280 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATTAGATTTAAGATT+AGG | - | chr1_3:72199410-72199429 | None:intergenic | 10.0% |
| !!! | AAAAAATTAGATTTAAGATT+AGG | - | chr1_3:72199410-72199429 | None:intergenic | 10.0% |
| !! | AAGCCAAATTGAAATTAAAT+TGG | - | chr1_3:72199059-72199078 | None:intergenic | 20.0% |
| !!! | AATAATTTTTCTTCTTCTTC+AGG | + | chr1_3:72199088-72199107 | Msa0138970:intron | 20.0% |
| !! | CAATACAACAAATATTTACA+AGG | - | chr1_3:72199643-72199662 | None:intergenic | 20.0% |
| !!! | ATATTTGTTGTATTGTTGTA+TGG | + | chr1_3:72199648-72199667 | Msa0138970:three_prime_UTR | 20.0% |
| !! | ATGAATAAGAATGCAATAAT+TGG | - | chr1_3:72199682-72199701 | None:intergenic | 20.0% |
| !! | AAGCCAAATTGAAATTAAAT+TGG | - | chr1_3:72199059-72199078 | None:intergenic | 20.0% |
| !!! | AATAATTTTTCTTCTTCTTC+AGG | + | chr1_3:72199088-72199107 | Msa0138970:intron | 20.0% |
| !! | CAATACAACAAATATTTACA+AGG | - | chr1_3:72199643-72199662 | None:intergenic | 20.0% |
| !!! | ATATTTGTTGTATTGTTGTA+TGG | + | chr1_3:72199648-72199667 | Msa0138970:three_prime_UTR | 20.0% |
| !! | ATGAATAAGAATGCAATAAT+TGG | - | chr1_3:72199682-72199701 | None:intergenic | 20.0% |
| ! | TACGAAAATCAATGATTGAT+GGG | - | chr1_3:72199031-72199050 | None:intergenic | 25.0% |
| ! | ATACGAAAATCAATGATTGA+TGG | - | chr1_3:72199032-72199051 | None:intergenic | 25.0% |
| ! | CCAAATTGAAATTAAATTGG+AGG | - | chr1_3:72199056-72199075 | None:intergenic | 25.0% |
| !! | CCTCCAATTTAATTTCAATT+TGG | + | chr1_3:72199053-72199072 | Msa0138970:intron | 25.0% |
| ! | AATAGTTGACATTTATGTAC+AGG | - | chr1_3:72199574-72199593 | None:intergenic | 25.0% |
| ! | AATAAGAATGCAATAATTGG+TGG | - | chr1_3:72199679-72199698 | None:intergenic | 25.0% |
| ! | ATGTATAACATTGAACCATT+TGG | + | chr1_3:72199714-72199733 | Msa0138970:three_prime_UTR | 25.0% |
| ! | TGTATAACATTGAACCATTT+GGG | + | chr1_3:72199715-72199734 | Msa0138970:three_prime_UTR | 25.0% |
| ! | CTTTGTTACATTAATCAACA+AGG | - | chr1_3:72199833-72199852 | None:intergenic | 25.0% |
| ! | TACGAAAATCAATGATTGAT+GGG | - | chr1_3:72199031-72199050 | None:intergenic | 25.0% |
| ! | ATACGAAAATCAATGATTGA+TGG | - | chr1_3:72199032-72199051 | None:intergenic | 25.0% |
| ! | CCAAATTGAAATTAAATTGG+AGG | - | chr1_3:72199056-72199075 | None:intergenic | 25.0% |
| !! | CCTCCAATTTAATTTCAATT+TGG | + | chr1_3:72199053-72199072 | Msa0138970:intron | 25.0% |
| ! | AATAGTTGACATTTATGTAC+AGG | - | chr1_3:72199574-72199593 | None:intergenic | 25.0% |
| ! | AATAAGAATGCAATAATTGG+TGG | - | chr1_3:72199679-72199698 | None:intergenic | 25.0% |
| ! | ATGTATAACATTGAACCATT+TGG | + | chr1_3:72199714-72199733 | Msa0138970:three_prime_UTR | 25.0% |
| ! | TGTATAACATTGAACCATTT+GGG | + | chr1_3:72199715-72199734 | Msa0138970:three_prime_UTR | 25.0% |
| ! | CTTTGTTACATTAATCAACA+AGG | - | chr1_3:72199833-72199852 | None:intergenic | 25.0% |
| TAGATCTTCGACACAAAAAT+GGG | + | chr1_3:72198824-72198843 | Msa0138970:exon | 30.0% | |
| !!! | TACTTTTTCTTCTCCAAATG+AGG | - | chr1_3:72199146-72199165 | None:intergenic | 30.0% |
| AAGAATACTTTACCTCAAAC+TGG | + | chr1_3:72199367-72199386 | Msa0138970:CDS | 30.0% | |
| CTCTGTTTATAGATCATTCA+AGG | + | chr1_3:72199497-72199516 | Msa0138970:CDS | 30.0% | |
| TTATAGATCATTCAAGGATG+AGG | + | chr1_3:72199503-72199522 | Msa0138970:CDS | 30.0% | |
| ! | TTTTCTCAGTGCTATAATAC+AGG | - | chr1_3:72199542-72199561 | None:intergenic | 30.0% |
| TTTCTGATATAAGAAGGTAG+TGG | - | chr1_3:72199620-72199639 | None:intergenic | 30.0% | |
| ACAAGGTTTCTGATATAAGA+AGG | - | chr1_3:72199626-72199645 | None:intergenic | 30.0% | |
| CAAATTCATAATAGCCCAAA+TGG | - | chr1_3:72199732-72199751 | None:intergenic | 30.0% | |
| !! | CATGATCATTGATGATGTAT+AGG | + | chr1_3:72199758-72199777 | Msa0138970:three_prime_UTR | 30.0% |
| ACATTAATCAACAAGGATGT+AGG | - | chr1_3:72199826-72199845 | None:intergenic | 30.0% | |
| TAGATCTTCGACACAAAAAT+GGG | + | chr1_3:72198824-72198843 | Msa0138970:exon | 30.0% | |
| !!! | TACTTTTTCTTCTCCAAATG+AGG | - | chr1_3:72199146-72199165 | None:intergenic | 30.0% |
| AAGAATACTTTACCTCAAAC+TGG | + | chr1_3:72199367-72199386 | Msa0138970:CDS | 30.0% | |
| CTCTGTTTATAGATCATTCA+AGG | + | chr1_3:72199497-72199516 | Msa0138970:CDS | 30.0% | |
| TTATAGATCATTCAAGGATG+AGG | + | chr1_3:72199503-72199522 | Msa0138970:CDS | 30.0% | |
| ! | TTTTCTCAGTGCTATAATAC+AGG | - | chr1_3:72199542-72199561 | None:intergenic | 30.0% |
| TTTCTGATATAAGAAGGTAG+TGG | - | chr1_3:72199620-72199639 | None:intergenic | 30.0% | |
| ACAAGGTTTCTGATATAAGA+AGG | - | chr1_3:72199626-72199645 | None:intergenic | 30.0% | |
| CAAATTCATAATAGCCCAAA+TGG | - | chr1_3:72199732-72199751 | None:intergenic | 30.0% | |
| !! | CATGATCATTGATGATGTAT+AGG | + | chr1_3:72199758-72199777 | Msa0138970:three_prime_UTR | 30.0% |
| ACATTAATCAACAAGGATGT+AGG | - | chr1_3:72199826-72199845 | None:intergenic | 30.0% | |
| CTAGATCTTCGACACAAAAA+TGG | + | chr1_3:72198823-72198842 | Msa0138970:exon | 35.0% | |
| TCAATGATTGATGGGACTTA+CGG | - | chr1_3:72199023-72199042 | None:intergenic | 35.0% | |
| GCAAGTTTATTACCAGTTTG+AGG | - | chr1_3:72199382-72199401 | None:intergenic | 35.0% | |
| CAACATGAAAAAGCAACAAG+AGG | - | chr1_3:72199440-72199459 | None:intergenic | 35.0% | |
| ! | TATAGCACTGAGAAAACCTT+TGG | + | chr1_3:72199546-72199565 | Msa0138970:CDS | 35.0% |
| CATTTATGTACAGGATCCAA+AGG | - | chr1_3:72199565-72199584 | None:intergenic | 35.0% | |
| CTAGATCTTCGACACAAAAA+TGG | + | chr1_3:72198823-72198842 | Msa0138970:exon | 35.0% | |
| TCAATGATTGATGGGACTTA+CGG | - | chr1_3:72199023-72199042 | None:intergenic | 35.0% | |
| GCAAGTTTATTACCAGTTTG+AGG | - | chr1_3:72199382-72199401 | None:intergenic | 35.0% | |
| CAACATGAAAAAGCAACAAG+AGG | - | chr1_3:72199440-72199459 | None:intergenic | 35.0% | |
| ! | TATAGCACTGAGAAAACCTT+TGG | + | chr1_3:72199546-72199565 | Msa0138970:CDS | 35.0% |
| CATTTATGTACAGGATCCAA+AGG | - | chr1_3:72199565-72199584 | None:intergenic | 35.0% | |
| ATCTTCGACACAAAAATGGG+AGG | + | chr1_3:72198827-72198846 | Msa0138970:exon | 40.0% | |
| TTCCAGAACGAGTTTACGTT+TGG | + | chr1_3:72198860-72198879 | Msa0138970:CDS | 40.0% | |
| TACCAAACGTAAACTCGTTC+TGG | - | chr1_3:72198865-72198884 | None:intergenic | 40.0% | |
| ! | TTTTCGCGTGTGTAGAACAA+AGG | + | chr1_3:72198951-72198970 | Msa0138970:intron | 40.0% |
| AATGATTGATGGGACTTACG+GGG | - | chr1_3:72199021-72199040 | None:intergenic | 40.0% | |
| CAATGATTGATGGGACTTAC+GGG | - | chr1_3:72199022-72199041 | None:intergenic | 40.0% | |
| TCTTCTTCTTCAGGTGATTG+TGG | + | chr1_3:72199097-72199116 | Msa0138970:intron | 40.0% | |
| TCCAGACTTAATTTACCAGC+TGG | + | chr1_3:72199322-72199341 | Msa0138970:CDS | 40.0% | |
| TCCAGCTGGTAAATTAAGTC+TGG | - | chr1_3:72199326-72199345 | None:intergenic | 40.0% | |
| TGCTATTGCAGCTAGTATGA+TGG | + | chr1_3:72199473-72199492 | Msa0138970:intron | 40.0% | |
| AGATCATTCAAGGATGAGGA+TGG | + | chr1_3:72199507-72199526 | Msa0138970:CDS | 40.0% | |
| ATCTTCGACACAAAAATGGG+AGG | + | chr1_3:72198827-72198846 | Msa0138970:exon | 40.0% | |
| TTCCAGAACGAGTTTACGTT+TGG | + | chr1_3:72198860-72198879 | Msa0138970:CDS | 40.0% | |
| TACCAAACGTAAACTCGTTC+TGG | - | chr1_3:72198865-72198884 | None:intergenic | 40.0% | |
| ! | TTTTCGCGTGTGTAGAACAA+AGG | + | chr1_3:72198951-72198970 | Msa0138970:intron | 40.0% |
| AATGATTGATGGGACTTACG+GGG | - | chr1_3:72199021-72199040 | None:intergenic | 40.0% | |
| CAATGATTGATGGGACTTAC+GGG | - | chr1_3:72199022-72199041 | None:intergenic | 40.0% | |
| TCTTCTTCTTCAGGTGATTG+TGG | + | chr1_3:72199097-72199116 | Msa0138970:intron | 40.0% | |
| TCCAGACTTAATTTACCAGC+TGG | + | chr1_3:72199322-72199341 | Msa0138970:CDS | 40.0% | |
| TCCAGCTGGTAAATTAAGTC+TGG | - | chr1_3:72199326-72199345 | None:intergenic | 40.0% | |
| TGCTATTGCAGCTAGTATGA+TGG | + | chr1_3:72199473-72199492 | Msa0138970:intron | 40.0% | |
| AGATCATTCAAGGATGAGGA+TGG | + | chr1_3:72199507-72199526 | Msa0138970:CDS | 40.0% | |
| TAGCAAGACAAGAGTTGCTC+TGG | - | chr1_3:72198806-72198825 | None:intergenic | 45.0% | |
| TTCGACACAAAAATGGGAGG+AGG | + | chr1_3:72198830-72198849 | Msa0138970:exon | 45.0% | |
| CAAATGAGGCAGATCGCATT+TGG | - | chr1_3:72199132-72199151 | None:intergenic | 45.0% | |
| CAAATGCGATCTGCCTCATT+TGG | + | chr1_3:72199130-72199149 | Msa0138970:CDS | 45.0% | |
| ! | ACAAAGAGAGCTTTTCCAGC+TGG | - | chr1_3:72199340-72199359 | None:intergenic | 45.0% |
| TAGCAAGACAAGAGTTGCTC+TGG | - | chr1_3:72198806-72198825 | None:intergenic | 45.0% | |
| TTCGACACAAAAATGGGAGG+AGG | + | chr1_3:72198830-72198849 | Msa0138970:exon | 45.0% | |
| CAAATGAGGCAGATCGCATT+TGG | - | chr1_3:72199132-72199151 | None:intergenic | 45.0% | |
| CAAATGCGATCTGCCTCATT+TGG | + | chr1_3:72199130-72199149 | Msa0138970:CDS | 45.0% | |
| ! | ACAAAGAGAGCTTTTCCAGC+TGG | - | chr1_3:72199340-72199359 | None:intergenic | 45.0% |
| !! | ATAAGATAAAATTATTAAAA+AGG | - | chr1_3:72198903-72198922 | None:intergenic | 5.0% |
| !! | ATAAGATAAAATTATTAAAA+AGG | - | chr1_3:72198903-72198922 | None:intergenic | 5.0% |
| GTTCCACGAGACTTGTCAGT+TGG | + | chr1_3:72199277-72199296 | Msa0138970:CDS | 50.0% | |
| TGTCCAACTGACAAGTCTCG+TGG | - | chr1_3:72199283-72199302 | None:intergenic | 50.0% | |
| GTTCCACGAGACTTGTCAGT+TGG | + | chr1_3:72199277-72199296 | Msa0138970:CDS | 50.0% | |
| TGTCCAACTGACAAGTCTCG+TGG | - | chr1_3:72199283-72199302 | None:intergenic | 50.0% | |
| ! | GGGGATTCGATCGGGGTATT+TGG | - | chr1_3:72199002-72199021 | None:intergenic | 55.0% |
| GACTTACGGGGATTCGATCG+GGG | - | chr1_3:72199009-72199028 | None:intergenic | 55.0% | |
| GGACTTACGGGGATTCGATC+GGG | - | chr1_3:72199010-72199029 | None:intergenic | 55.0% | |
| GGGACTTACGGGGATTCGAT+CGG | - | chr1_3:72199011-72199030 | None:intergenic | 55.0% | |
| ! | GGGGATTCGATCGGGGTATT+TGG | - | chr1_3:72199002-72199021 | None:intergenic | 55.0% |
| GACTTACGGGGATTCGATCG+GGG | - | chr1_3:72199009-72199028 | None:intergenic | 55.0% | |
| GGACTTACGGGGATTCGATC+GGG | - | chr1_3:72199010-72199029 | None:intergenic | 55.0% | |
| GGGACTTACGGGGATTCGAT+CGG | - | chr1_3:72199011-72199030 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 72198765 | 72199917 | 72198765 | ID=Msa0138970;Name=Msa0138970 |
| chr1_3 | mRNA | 72198765 | 72199917 | 72198765 | ID=Msa0138970-mRNA-1;Parent=Msa0138970;Name=Msa0138970-mRNA-1;_AED=0.13;_eAED=0.13;_QI=77|1|1|1|1|1|5|336|121 |
| chr1_3 | exon | 72198765 | 72198881 | 72198765 | ID=Msa0138970-mRNA-1:exon:25228;Parent=Msa0138970-mRNA-1 |
| chr1_3 | exon | 72198966 | 72199021 | 72198966 | ID=Msa0138970-mRNA-1:exon:25229;Parent=Msa0138970-mRNA-1 |
| chr1_3 | exon | 72199110 | 72199162 | 72199110 | ID=Msa0138970-mRNA-1:exon:25230;Parent=Msa0138970-mRNA-1 |
| chr1_3 | exon | 72199270 | 72199388 | 72199270 | ID=Msa0138970-mRNA-1:exon:25231;Parent=Msa0138970-mRNA-1 |
| chr1_3 | exon | 72199484 | 72199917 | 72199484 | ID=Msa0138970-mRNA-1:exon:25232;Parent=Msa0138970-mRNA-1 |
| chr1_3 | five_prime_UTR | 72198765 | 72198841 | 72198765 | ID=Msa0138970-mRNA-1:five_prime_utr;Parent=Msa0138970-mRNA-1 |
| chr1_3 | CDS | 72198842 | 72198881 | 72198842 | ID=Msa0138970-mRNA-1:cds;Parent=Msa0138970-mRNA-1 |
| chr1_3 | CDS | 72198966 | 72199021 | 72198966 | ID=Msa0138970-mRNA-1:cds;Parent=Msa0138970-mRNA-1 |
| chr1_3 | CDS | 72199110 | 72199162 | 72199110 | ID=Msa0138970-mRNA-1:cds;Parent=Msa0138970-mRNA-1 |
| chr1_3 | CDS | 72199270 | 72199388 | 72199270 | ID=Msa0138970-mRNA-1:cds;Parent=Msa0138970-mRNA-1 |
| chr1_3 | CDS | 72199484 | 72199581 | 72199484 | ID=Msa0138970-mRNA-1:cds;Parent=Msa0138970-mRNA-1 |
| chr1_3 | three_prime_UTR | 72199582 | 72199917 | 72199582 | ID=Msa0138970-mRNA-1:three_prime_utr;Parent=Msa0138970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
