Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006341.t1 | XP_003592322.2 | 90.6 | 180 | 17 | 0 | 1 | 180 | 26 | 205 | 9.00E-81 | 309.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006341.t1 | Q9M0L0 | 55.4 | 186 | 71 | 3 | 2 | 178 | 34 | 216 | 4.7e-46 | 185.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006341.t1 | G7IC04 | 90.6 | 180 | 17 | 0 | 1 | 180 | 23 | 202 | 6.5e-81 | 309.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene006341.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006341.t1 | MTR_1g101600 | 96.667 | 180 | 6 | 0 | 1 | 180 | 23 | 202 | 8.94e-130 | 362 |
MS.gene006341.t1 | MTR_6g466130 | 62.983 | 181 | 64 | 2 | 2 | 179 | 49 | 229 | 8.38e-72 | 216 |
MS.gene006341.t1 | MTR_6g466000 | 59.574 | 188 | 65 | 3 | 2 | 178 | 40 | 227 | 8.14e-71 | 214 |
MS.gene006341.t1 | MTR_6g465690 | 68.553 | 159 | 50 | 0 | 2 | 160 | 46 | 204 | 2.32e-70 | 214 |
MS.gene006341.t1 | MTR_6g465460 | 62.069 | 174 | 59 | 3 | 2 | 172 | 37 | 206 | 1.06e-68 | 210 |
MS.gene006341.t1 | MTR_6g465420 | 60.345 | 174 | 64 | 2 | 2 | 170 | 37 | 210 | 4.52e-68 | 208 |
MS.gene006341.t1 | MTR_6g465530 | 59.563 | 183 | 68 | 1 | 2 | 178 | 16 | 198 | 4.69e-68 | 206 |
MS.gene006341.t1 | MTR_6g465430 | 61.582 | 177 | 57 | 3 | 2 | 170 | 37 | 210 | 1.79e-67 | 206 |
MS.gene006341.t1 | MTR_6g465450 | 62.286 | 175 | 60 | 2 | 2 | 170 | 37 | 211 | 3.85e-65 | 200 |
MS.gene006341.t1 | MTR_6g465510 | 56.995 | 193 | 67 | 2 | 2 | 178 | 16 | 208 | 6.86e-61 | 188 |
MS.gene006341.t1 | MTR_6g465850 | 45.333 | 225 | 66 | 5 | 13 | 180 | 57 | 281 | 4.98e-56 | 178 |
MS.gene006341.t1 | MTR_5g010930 | 48.241 | 199 | 79 | 5 | 2 | 180 | 32 | 226 | 1.22e-55 | 175 |
MS.gene006341.t1 | MTR_5g010910 | 47.692 | 195 | 84 | 4 | 2 | 180 | 32 | 224 | 1.91e-53 | 169 |
MS.gene006341.t1 | MTR_5g010940 | 47.692 | 195 | 84 | 4 | 2 | 180 | 37 | 229 | 2.06e-53 | 170 |
MS.gene006341.t1 | MTR_6g466020 | 49.714 | 175 | 67 | 3 | 2 | 175 | 26 | 180 | 1.19e-49 | 159 |
MS.gene006341.t1 | MTR_4g102660 | 78.125 | 96 | 18 | 2 | 2 | 94 | 27 | 122 | 1.15e-46 | 152 |
MS.gene006341.t1 | MTR_6g465990 | 48.404 | 188 | 66 | 4 | 2 | 178 | 26 | 193 | 6.58e-44 | 144 |
MS.gene006341.t1 | MTR_3g110205 | 60.185 | 108 | 40 | 2 | 9 | 113 | 32 | 139 | 7.25e-37 | 126 |
MS.gene006341.t1 | MTR_7g117690 | 68.750 | 80 | 25 | 0 | 14 | 93 | 23 | 102 | 3.46e-34 | 119 |
MS.gene006341.t1 | MTR_2g085015 | 57.426 | 101 | 41 | 2 | 13 | 111 | 41 | 141 | 3.85e-34 | 120 |
MS.gene006341.t1 | MTR_2g101340 | 61.957 | 92 | 34 | 1 | 3 | 93 | 24 | 115 | 7.42e-34 | 119 |
MS.gene006341.t1 | MTR_5g012910 | 67.089 | 79 | 26 | 0 | 15 | 93 | 24 | 102 | 1.53e-33 | 117 |
MS.gene006341.t1 | MTR_8g102800 | 64.706 | 85 | 30 | 0 | 9 | 93 | 27 | 111 | 4.24e-33 | 118 |
MS.gene006341.t1 | MTR_7g046260 | 65.432 | 81 | 28 | 0 | 13 | 93 | 55 | 135 | 5.14e-33 | 117 |
MS.gene006341.t1 | MTR_8g006410 | 65.385 | 78 | 27 | 0 | 16 | 93 | 49 | 126 | 9.58e-33 | 116 |
MS.gene006341.t1 | MTR_8g013860 | 65.823 | 79 | 27 | 0 | 15 | 93 | 43 | 121 | 3.06e-32 | 115 |
MS.gene006341.t1 | MTR_8g027465 | 60.000 | 95 | 32 | 2 | 2 | 93 | 25 | 116 | 1.18e-30 | 110 |
MS.gene006341.t1 | MTR_4g100650 | 54.545 | 110 | 50 | 0 | 15 | 124 | 70 | 179 | 3.71e-30 | 111 |
MS.gene006341.t1 | MTR_6g088405 | 64.103 | 78 | 28 | 0 | 16 | 93 | 41 | 118 | 5.53e-30 | 109 |
MS.gene006341.t1 | MTR_4g102670 | 62.025 | 79 | 29 | 1 | 15 | 93 | 11 | 88 | 3.89e-29 | 105 |
MS.gene006341.t1 | MTR_6g088425 | 62.791 | 86 | 32 | 0 | 15 | 100 | 45 | 130 | 4.11e-25 | 97.4 |
MS.gene006341.t1 | MTR_4g035430 | 51.546 | 97 | 42 | 1 | 4 | 100 | 22 | 113 | 8.72e-25 | 96.3 |
MS.gene006341.t1 | MTR_1g006660 | 56.383 | 94 | 37 | 1 | 4 | 93 | 28 | 121 | 1.04e-23 | 94.4 |
MS.gene006341.t1 | MTR_5g008590 | 61.628 | 86 | 33 | 0 | 19 | 104 | 11 | 96 | 2.39e-22 | 89.0 |
MS.gene006341.t1 | MTR_5g008550 | 43.902 | 123 | 59 | 1 | 19 | 141 | 21 | 133 | 6.84e-22 | 88.2 |
MS.gene006341.t1 | MTR_5g008470 | 46.429 | 84 | 45 | 0 | 21 | 104 | 77 | 160 | 1.12e-19 | 82.0 |
MS.gene006341.t1 | MTR_3g102100 | 64.286 | 56 | 20 | 0 | 19 | 74 | 45 | 100 | 1.26e-19 | 81.6 |
MS.gene006341.t1 | MTR_1g019110 | 46.512 | 86 | 43 | 1 | 19 | 104 | 44 | 126 | 1.52e-19 | 81.6 |
MS.gene006341.t1 | MTR_1g014820 | 40.367 | 109 | 61 | 1 | 18 | 122 | 26 | 134 | 2.73e-18 | 80.1 |
MS.gene006341.t1 | MTR_5g016750 | 62.500 | 56 | 21 | 0 | 19 | 74 | 25 | 80 | 3.30e-18 | 78.2 |
MS.gene006341.t1 | MTR_1g060910 | 44.660 | 103 | 35 | 2 | 1 | 101 | 1 | 83 | 5.30e-18 | 77.4 |
MS.gene006341.t1 | MTR_1g101550 | 37.288 | 177 | 95 | 5 | 19 | 180 | 57 | 232 | 6.76e-18 | 78.6 |
MS.gene006341.t1 | MTR_5g083340 | 53.947 | 76 | 26 | 1 | 19 | 94 | 85 | 151 | 7.13e-18 | 80.5 |
MS.gene006341.t1 | MTR_2g435590 | 52.000 | 75 | 33 | 1 | 3 | 77 | 83 | 154 | 1.22e-17 | 78.2 |
MS.gene006341.t1 | MTR_1g014780 | 43.158 | 95 | 47 | 1 | 18 | 105 | 37 | 131 | 1.88e-17 | 77.0 |
MS.gene006341.t1 | MTR_3g105510 | 43.529 | 85 | 48 | 0 | 19 | 103 | 37 | 121 | 3.01e-17 | 77.0 |
MS.gene006341.t1 | MTR_1g014860 | 37.069 | 116 | 66 | 1 | 14 | 122 | 17 | 132 | 8.39e-17 | 75.1 |
MS.gene006341.t1 | MTR_2g043050 | 45.882 | 85 | 46 | 0 | 18 | 102 | 18 | 102 | 8.55e-17 | 75.1 |
MS.gene006341.t1 | MTR_1g090170 | 40.909 | 110 | 58 | 2 | 14 | 122 | 147 | 250 | 1.01e-16 | 76.3 |
MS.gene006341.t1 | MTR_7g020980 | 55.000 | 60 | 27 | 0 | 15 | 74 | 47 | 106 | 2.06e-16 | 73.2 |
MS.gene006341.t1 | MTR_5g083330 | 52.055 | 73 | 35 | 0 | 4 | 76 | 20 | 92 | 2.37e-16 | 75.1 |
MS.gene006341.t1 | MTR_1g028560 | 59.649 | 57 | 23 | 0 | 19 | 75 | 115 | 171 | 2.58e-16 | 75.5 |
MS.gene006341.t1 | MTR_7g021010 | 55.000 | 60 | 27 | 0 | 15 | 74 | 8 | 67 | 2.77e-16 | 72.0 |
MS.gene006341.t1 | MTR_1g090170 | 55.556 | 63 | 28 | 0 | 14 | 76 | 234 | 296 | 2.93e-16 | 75.9 |
MS.gene006341.t1 | MTR_2g105380 | 48.611 | 72 | 37 | 0 | 7 | 78 | 105 | 176 | 2.94e-16 | 75.5 |
MS.gene006341.t1 | MTR_8g090350 | 48.684 | 76 | 36 | 1 | 18 | 90 | 112 | 187 | 3.15e-16 | 74.7 |
MS.gene006341.t1 | MTR_1g014800 | 38.462 | 117 | 60 | 2 | 18 | 122 | 30 | 146 | 3.41e-16 | 73.6 |
MS.gene006341.t1 | MTR_2g090235 | 59.322 | 59 | 24 | 0 | 18 | 76 | 217 | 275 | 3.97e-16 | 75.5 |
MS.gene006341.t1 | MTR_4g086220 | 62.500 | 56 | 21 | 0 | 19 | 74 | 96 | 151 | 4.49e-16 | 73.6 |
MS.gene006341.t1 | MTR_2g043030 | 37.037 | 108 | 68 | 0 | 1 | 108 | 1 | 108 | 4.57e-16 | 72.8 |
MS.gene006341.t1 | MTR_7g021010 | 55.000 | 60 | 27 | 0 | 15 | 74 | 47 | 106 | 4.97e-16 | 72.4 |
MS.gene006341.t1 | MTR_3g074130 | 46.429 | 84 | 34 | 1 | 18 | 90 | 149 | 232 | 6.60e-16 | 74.3 |
MS.gene006341.t1 | MTR_1g087920 | 44.872 | 78 | 43 | 0 | 9 | 86 | 67 | 144 | 6.65e-16 | 73.9 |
MS.gene006341.t1 | MTR_5g082950 | 55.405 | 74 | 25 | 2 | 3 | 74 | 54 | 121 | 8.08e-16 | 73.9 |
MS.gene006341.t1 | MTR_3g105480 | 43.373 | 83 | 47 | 0 | 21 | 103 | 33 | 115 | 8.19e-16 | 72.8 |
MS.gene006341.t1 | MTR_2g015050 | 38.462 | 104 | 54 | 3 | 8 | 110 | 125 | 219 | 1.22e-15 | 73.2 |
MS.gene006341.t1 | MTR_4g086165 | 60.714 | 56 | 22 | 0 | 19 | 74 | 82 | 137 | 1.39e-15 | 71.6 |
MS.gene006341.t1 | MTR_4g086190 | 60.714 | 56 | 22 | 0 | 19 | 74 | 96 | 151 | 1.39e-15 | 72.0 |
MS.gene006341.t1 | MTR_4g086160 | 60.714 | 56 | 22 | 0 | 19 | 74 | 96 | 151 | 1.61e-15 | 72.0 |
MS.gene006341.t1 | MTR_8g092460 | 55.932 | 59 | 26 | 0 | 19 | 77 | 145 | 203 | 1.68e-15 | 73.2 |
MS.gene006341.t1 | MTR_5g062700 | 59.322 | 59 | 24 | 0 | 18 | 76 | 172 | 230 | 2.84e-15 | 72.8 |
MS.gene006341.t1 | MTR_2g014300 | 62.500 | 56 | 21 | 0 | 19 | 74 | 15 | 70 | 3.27e-15 | 70.1 |
MS.gene006341.t1 | MTR_2g089170 | 60.714 | 56 | 22 | 0 | 19 | 74 | 65 | 120 | 3.63e-15 | 70.1 |
MS.gene006341.t1 | MTR_3g053690 | 58.333 | 60 | 25 | 0 | 15 | 74 | 23 | 82 | 4.17e-15 | 70.9 |
MS.gene006341.t1 | MTR_1g074310 | 59.649 | 57 | 22 | 1 | 19 | 74 | 21 | 77 | 4.52e-15 | 68.9 |
MS.gene006341.t1 | MTR_5g009620 | 53.623 | 69 | 26 | 1 | 12 | 74 | 99 | 167 | 4.61e-15 | 71.6 |
MS.gene006341.t1 | MTR_4g114570 | 58.929 | 56 | 23 | 0 | 19 | 74 | 7 | 62 | 5.00e-15 | 70.5 |
MS.gene006341.t1 | MTR_2g078680 | 60.714 | 56 | 22 | 0 | 19 | 74 | 31 | 86 | 5.81e-15 | 70.1 |
MS.gene006341.t1 | MTR_2g438180 | 61.017 | 59 | 22 | 1 | 19 | 76 | 14 | 72 | 6.44e-15 | 68.2 |
MS.gene006341.t1 | MTR_4g010640 | 58.929 | 56 | 23 | 0 | 19 | 74 | 7 | 62 | 6.71e-15 | 70.1 |
MS.gene006341.t1 | MTR_0939s0010 | 58.929 | 56 | 23 | 0 | 19 | 74 | 65 | 120 | 7.33e-15 | 69.7 |
MS.gene006341.t1 | MTR_7g092190 | 60.714 | 56 | 22 | 0 | 19 | 74 | 30 | 85 | 8.11e-15 | 70.9 |
MS.gene006341.t1 | MTR_8g022820 | 48.571 | 70 | 36 | 0 | 9 | 78 | 113 | 182 | 1.25e-14 | 70.9 |
MS.gene006341.t1 | MTR_8g022820 | 48.571 | 70 | 36 | 0 | 9 | 78 | 114 | 183 | 1.25e-14 | 70.9 |
MS.gene006341.t1 | MTR_8g022820 | 48.571 | 70 | 36 | 0 | 9 | 78 | 114 | 183 | 1.25e-14 | 70.9 |
MS.gene006341.t1 | MTR_3g072610 | 47.191 | 89 | 43 | 2 | 19 | 103 | 25 | 113 | 1.29e-14 | 69.3 |
MS.gene006341.t1 | MTR_8g032610 | 56.140 | 57 | 25 | 0 | 19 | 75 | 27 | 83 | 1.34e-14 | 70.5 |
MS.gene006341.t1 | MTR_2g103700 | 57.143 | 56 | 24 | 0 | 19 | 74 | 7 | 62 | 1.39e-14 | 68.6 |
MS.gene006341.t1 | MTR_5g008540 | 50.820 | 61 | 30 | 0 | 21 | 81 | 26 | 86 | 1.71e-14 | 66.2 |
MS.gene006341.t1 | MTR_7g028925 | 51.515 | 66 | 29 | 1 | 18 | 83 | 28 | 90 | 2.02e-14 | 65.9 |
MS.gene006341.t1 | MTR_2g043040 | 42.353 | 85 | 49 | 0 | 18 | 102 | 18 | 102 | 2.09e-14 | 68.9 |
MS.gene006341.t1 | MTR_3g090760 | 47.761 | 67 | 35 | 0 | 19 | 85 | 113 | 179 | 4.58e-14 | 69.3 |
MS.gene006341.t1 | MTR_4g111915 | 49.153 | 59 | 30 | 0 | 19 | 77 | 53 | 111 | 5.31e-14 | 65.9 |
MS.gene006341.t1 | MTR_3g106290 | 60.714 | 56 | 22 | 0 | 19 | 74 | 8 | 63 | 7.17e-14 | 66.6 |
MS.gene006341.t1 | MTR_4g078710 | 57.143 | 56 | 24 | 0 | 19 | 74 | 28 | 83 | 7.20e-14 | 67.4 |
MS.gene006341.t1 | MTR_2g016730 | 54.237 | 59 | 27 | 0 | 16 | 74 | 20 | 78 | 7.93e-14 | 68.6 |
MS.gene006341.t1 | MTR_1g048610 | 56.140 | 57 | 24 | 1 | 19 | 74 | 89 | 145 | 8.69e-14 | 67.4 |
MS.gene006341.t1 | MTR_2g014340 | 57.143 | 56 | 24 | 0 | 19 | 74 | 19 | 74 | 8.97e-14 | 66.6 |
MS.gene006341.t1 | MTR_1g070070 | 56.140 | 57 | 24 | 1 | 19 | 74 | 21 | 77 | 1.04e-13 | 65.5 |
MS.gene006341.t1 | MTR_5g008790 | 53.333 | 60 | 26 | 1 | 19 | 76 | 18 | 77 | 1.15e-13 | 65.9 |
MS.gene006341.t1 | MTR_4g008860 | 60.714 | 56 | 22 | 0 | 19 | 74 | 8 | 63 | 1.28e-13 | 66.2 |
MS.gene006341.t1 | MTR_1g090290 | 53.226 | 62 | 26 | 2 | 14 | 74 | 110 | 169 | 2.14e-13 | 65.9 |
MS.gene006341.t1 | MTR_4g100450 | 48.649 | 74 | 37 | 1 | 2 | 74 | 137 | 210 | 2.21e-13 | 67.0 |
MS.gene006341.t1 | MTR_6g029180 | 47.945 | 73 | 37 | 1 | 3 | 75 | 18 | 89 | 2.43e-13 | 67.0 |
MS.gene006341.t1 | MTR_4g100420 | 57.895 | 57 | 23 | 1 | 19 | 74 | 157 | 213 | 2.59e-13 | 67.0 |
MS.gene006341.t1 | MTR_7g085810 | 53.571 | 56 | 26 | 0 | 19 | 74 | 30 | 85 | 2.70e-13 | 66.2 |
MS.gene006341.t1 | MTR_4g112490 | 49.153 | 59 | 30 | 0 | 19 | 77 | 53 | 111 | 2.82e-13 | 65.5 |
MS.gene006341.t1 | MTR_1g074230 | 57.895 | 57 | 23 | 1 | 19 | 74 | 19 | 75 | 3.41e-13 | 63.9 |
MS.gene006341.t1 | MTR_8g085960 | 43.243 | 74 | 41 | 1 | 4 | 77 | 11 | 83 | 3.60e-13 | 65.9 |
MS.gene006341.t1 | MTR_6g012970 | 53.571 | 56 | 26 | 0 | 19 | 74 | 38 | 93 | 5.72e-13 | 66.2 |
MS.gene006341.t1 | MTR_2g043020 | 35.455 | 110 | 69 | 1 | 18 | 127 | 18 | 125 | 6.00e-13 | 64.7 |
MS.gene006341.t1 | MTR_4g088005 | 46.377 | 69 | 36 | 1 | 7 | 74 | 45 | 113 | 6.56e-13 | 62.8 |
MS.gene006341.t1 | MTR_5g085070 | 57.143 | 56 | 24 | 0 | 19 | 74 | 51 | 106 | 7.41e-13 | 65.5 |
MS.gene006341.t1 | MTR_6g041970 | 40.000 | 95 | 44 | 1 | 19 | 113 | 18 | 99 | 8.42e-13 | 61.6 |
MS.gene006341.t1 | MTR_8g099215 | 46.835 | 79 | 36 | 1 | 2 | 74 | 84 | 162 | 9.29e-13 | 65.5 |
MS.gene006341.t1 | MTR_1g074250 | 50.820 | 61 | 28 | 1 | 16 | 74 | 16 | 76 | 9.48e-13 | 62.4 |
MS.gene006341.t1 | MTR_7g011630 | 53.571 | 56 | 26 | 0 | 19 | 74 | 42 | 97 | 9.59e-13 | 65.9 |
MS.gene006341.t1 | MTR_5g075570 | 48.333 | 60 | 31 | 0 | 15 | 74 | 120 | 179 | 1.04e-12 | 65.1 |
MS.gene006341.t1 | MTR_5g085100 | 49.315 | 73 | 34 | 1 | 2 | 74 | 32 | 101 | 1.07e-12 | 65.1 |
MS.gene006341.t1 | MTR_7g081805 | 54.386 | 57 | 25 | 1 | 19 | 74 | 61 | 117 | 1.56e-12 | 63.5 |
MS.gene006341.t1 | MTR_7g081815 | 54.386 | 57 | 25 | 1 | 19 | 74 | 61 | 117 | 1.77e-12 | 63.5 |
MS.gene006341.t1 | MTR_8g069360 | 53.571 | 56 | 26 | 0 | 19 | 74 | 44 | 99 | 3.32e-12 | 64.3 |
MS.gene006341.t1 | MTR_7g096750 | 56.140 | 57 | 24 | 1 | 19 | 74 | 20 | 76 | 3.87e-12 | 61.2 |
MS.gene006341.t1 | MTR_4g054360 | 49.231 | 65 | 32 | 1 | 11 | 74 | 116 | 180 | 4.20e-12 | 63.2 |
MS.gene006341.t1 | MTR_2g015040 | 52.632 | 57 | 26 | 1 | 19 | 74 | 63 | 119 | 5.41e-12 | 61.2 |
MS.gene006341.t1 | MTR_8g006840 | 52.632 | 57 | 26 | 1 | 19 | 74 | 125 | 181 | 5.94e-12 | 62.0 |
MS.gene006341.t1 | MTR_1g069985 | 32.639 | 144 | 75 | 4 | 19 | 152 | 75 | 206 | 6.00e-12 | 62.0 |
MS.gene006341.t1 | MTR_7g081795 | 52.632 | 57 | 26 | 1 | 19 | 74 | 60 | 116 | 8.77e-12 | 61.6 |
MS.gene006341.t1 | MTR_8g006815 | 52.632 | 57 | 26 | 1 | 19 | 74 | 96 | 152 | 1.01e-11 | 61.2 |
MS.gene006341.t1 | MTR_4g054740 | 47.692 | 65 | 33 | 1 | 11 | 74 | 89 | 153 | 1.07e-11 | 61.6 |
MS.gene006341.t1 | MTR_7g096700 | 56.140 | 57 | 24 | 1 | 19 | 74 | 20 | 76 | 1.20e-11 | 59.7 |
MS.gene006341.t1 | MTR_4g054860 | 47.692 | 65 | 33 | 1 | 11 | 74 | 123 | 187 | 1.70e-11 | 61.6 |
MS.gene006341.t1 | MTR_8g006825 | 52.632 | 57 | 26 | 1 | 19 | 74 | 96 | 152 | 1.75e-11 | 60.8 |
MS.gene006341.t1 | MTR_1g070020 | 45.588 | 68 | 36 | 1 | 9 | 75 | 60 | 127 | 1.84e-11 | 60.8 |
MS.gene006341.t1 | MTR_4g100380 | 56.140 | 57 | 24 | 1 | 19 | 74 | 145 | 201 | 1.85e-11 | 61.2 |
MS.gene006341.t1 | MTR_7g070220 | 53.968 | 63 | 22 | 1 | 19 | 74 | 78 | 140 | 1.89e-11 | 62.0 |
MS.gene006341.t1 | MTR_4g082345 | 51.786 | 56 | 27 | 0 | 19 | 74 | 48 | 103 | 2.02e-11 | 61.6 |
MS.gene006341.t1 | MTR_1g070035 | 50.000 | 58 | 28 | 1 | 19 | 75 | 77 | 134 | 2.38e-11 | 60.5 |
MS.gene006341.t1 | MTR_5g032820 | 55.357 | 56 | 25 | 0 | 19 | 74 | 46 | 101 | 2.60e-11 | 61.6 |
MS.gene006341.t1 | MTR_3g095190 | 55.714 | 70 | 30 | 1 | 19 | 87 | 170 | 239 | 3.49e-11 | 61.2 |
MS.gene006341.t1 | MTR_1g070015 | 50.000 | 58 | 28 | 1 | 19 | 75 | 84 | 141 | 4.94e-11 | 59.7 |
MS.gene006341.t1 | MTR_4g119270 | 44.444 | 72 | 37 | 1 | 3 | 74 | 40 | 108 | 4.97e-11 | 60.5 |
MS.gene006341.t1 | MTR_1g012470 | 40.659 | 91 | 49 | 1 | 19 | 109 | 7 | 92 | 5.59e-11 | 59.3 |
MS.gene006341.t1 | MTR_1g070000 | 50.000 | 56 | 27 | 1 | 21 | 75 | 86 | 141 | 7.62e-11 | 59.3 |
MS.gene006341.t1 | MTR_1g070045 | 50.000 | 58 | 28 | 1 | 19 | 75 | 66 | 123 | 8.77e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006341.t1 | AT5G51990 | 55.959 | 193 | 62 | 5 | 2 | 178 | 37 | 222 | 2.94e-63 | 194 |
MS.gene006341.t1 | AT4G25470 | 57.219 | 187 | 66 | 5 | 2 | 178 | 34 | 216 | 4.54e-62 | 191 |
MS.gene006341.t1 | AT4G25480 | 57.527 | 186 | 67 | 3 | 2 | 178 | 34 | 216 | 1.51e-61 | 190 |
MS.gene006341.t1 | AT4G25490 | 57.754 | 187 | 65 | 5 | 2 | 178 | 31 | 213 | 6.61e-57 | 178 |
MS.gene006341.t1 | AT1G63030 | 52.459 | 183 | 67 | 4 | 2 | 178 | 13 | 181 | 4.23e-56 | 175 |
MS.gene006341.t1 | AT1G63030 | 52.459 | 183 | 67 | 4 | 2 | 178 | 13 | 181 | 4.23e-56 | 175 |
MS.gene006341.t1 | AT1G12610 | 74.038 | 104 | 27 | 0 | 2 | 105 | 13 | 116 | 2.41e-53 | 169 |
MS.gene006341.t1 | AT5G25810 | 67.442 | 86 | 28 | 0 | 15 | 100 | 32 | 117 | 1.33e-36 | 126 |
MS.gene006341.t1 | AT5G11590 | 64.368 | 87 | 31 | 0 | 15 | 101 | 47 | 133 | 1.32e-34 | 122 |
MS.gene006341.t1 | AT4G16750 | 66.250 | 80 | 27 | 0 | 14 | 93 | 35 | 114 | 4.93e-33 | 116 |
MS.gene006341.t1 | AT4G32800 | 54.000 | 100 | 46 | 0 | 1 | 100 | 1 | 100 | 1.64e-32 | 116 |
MS.gene006341.t1 | AT2G35700 | 66.250 | 80 | 27 | 0 | 14 | 93 | 40 | 119 | 1.77e-32 | 115 |
MS.gene006341.t1 | AT2G44940 | 61.290 | 93 | 36 | 0 | 8 | 100 | 89 | 181 | 3.91e-32 | 117 |
MS.gene006341.t1 | AT1G01250 | 66.250 | 80 | 27 | 0 | 14 | 93 | 40 | 119 | 3.11e-31 | 112 |
MS.gene006341.t1 | AT3G16280 | 54.615 | 130 | 56 | 2 | 15 | 142 | 57 | 185 | 1.81e-30 | 111 |
MS.gene006341.t1 | AT3G16280 | 54.615 | 130 | 56 | 2 | 15 | 142 | 75 | 203 | 2.09e-30 | 111 |
MS.gene006341.t1 | AT2G25820 | 64.474 | 76 | 27 | 0 | 18 | 93 | 25 | 100 | 1.59e-27 | 103 |
MS.gene006341.t1 | AT2G36450 | 60.494 | 81 | 31 | 1 | 7 | 86 | 3 | 83 | 3.16e-27 | 101 |
MS.gene006341.t1 | AT1G71450 | 51.282 | 117 | 55 | 1 | 19 | 135 | 24 | 138 | 3.55e-27 | 101 |
MS.gene006341.t1 | AT3G60490 | 58.537 | 82 | 33 | 1 | 13 | 93 | 64 | 145 | 3.72e-27 | 103 |
MS.gene006341.t1 | AT1G77200 | 60.674 | 89 | 34 | 1 | 5 | 93 | 30 | 117 | 3.57e-23 | 92.8 |
MS.gene006341.t1 | AT5G52020 | 40.116 | 172 | 94 | 3 | 15 | 178 | 61 | 231 | 4.31e-23 | 92.0 |
MS.gene006341.t1 | AT1G33760 | 38.095 | 168 | 90 | 3 | 1 | 167 | 1 | 155 | 1.71e-21 | 86.7 |
MS.gene006341.t1 | AT1G74930 | 41.176 | 119 | 63 | 1 | 19 | 130 | 21 | 139 | 1.98e-20 | 84.3 |
MS.gene006341.t1 | AT2G47520 | 57.143 | 63 | 27 | 0 | 15 | 77 | 46 | 108 | 3.63e-20 | 83.2 |
MS.gene006341.t1 | AT1G46768 | 61.905 | 63 | 23 | 1 | 14 | 76 | 27 | 88 | 4.29e-20 | 82.0 |
MS.gene006341.t1 | AT1G46768 | 61.905 | 63 | 23 | 1 | 14 | 76 | 27 | 88 | 5.82e-20 | 82.0 |
MS.gene006341.t1 | AT1G46768 | 61.905 | 63 | 23 | 1 | 14 | 76 | 27 | 88 | 5.82e-20 | 82.0 |
MS.gene006341.t1 | AT1G21910 | 46.237 | 93 | 43 | 1 | 19 | 104 | 50 | 142 | 6.98e-20 | 83.6 |
MS.gene006341.t1 | AT4G36900 | 61.667 | 60 | 23 | 0 | 15 | 74 | 26 | 85 | 1.75e-19 | 82.0 |
MS.gene006341.t1 | AT1G19210 | 36.957 | 138 | 73 | 3 | 19 | 156 | 12 | 135 | 2.05e-19 | 81.3 |
MS.gene006341.t1 | AT3G50260 | 43.137 | 102 | 51 | 3 | 19 | 116 | 21 | 119 | 2.59e-19 | 80.5 |
MS.gene006341.t1 | AT2G23340 | 64.286 | 56 | 20 | 0 | 19 | 74 | 28 | 83 | 4.29e-19 | 80.5 |
MS.gene006341.t1 | AT5G67190 | 60.714 | 56 | 22 | 0 | 19 | 74 | 21 | 76 | 9.93e-19 | 79.7 |
MS.gene006341.t1 | AT4G06746 | 43.878 | 98 | 50 | 1 | 19 | 111 | 36 | 133 | 1.43e-18 | 78.2 |
MS.gene006341.t1 | AT3G16770 | 54.054 | 74 | 34 | 0 | 3 | 76 | 63 | 136 | 2.92e-18 | 79.7 |
MS.gene006341.t1 | AT1G12630 | 65.714 | 70 | 23 | 1 | 15 | 84 | 15 | 83 | 4.42e-18 | 78.2 |
MS.gene006341.t1 | AT5G21960 | 40.708 | 113 | 65 | 1 | 17 | 127 | 5 | 117 | 4.84e-18 | 78.6 |
MS.gene006341.t1 | AT4G13620 | 50.633 | 79 | 37 | 1 | 5 | 81 | 216 | 294 | 1.15e-17 | 79.7 |
MS.gene006341.t1 | AT2G22200 | 50.667 | 75 | 35 | 1 | 18 | 90 | 70 | 144 | 1.51e-17 | 78.2 |
MS.gene006341.t1 | AT4G39780 | 59.016 | 61 | 25 | 0 | 14 | 74 | 88 | 148 | 5.24e-17 | 76.6 |
MS.gene006341.t1 | AT1G22190 | 53.425 | 73 | 32 | 1 | 4 | 76 | 70 | 140 | 6.31e-17 | 76.3 |
MS.gene006341.t1 | AT2G33710 | 48.780 | 82 | 37 | 1 | 14 | 90 | 65 | 146 | 7.32e-17 | 75.5 |
MS.gene006341.t1 | AT2G33710 | 48.780 | 82 | 37 | 1 | 14 | 90 | 65 | 146 | 1.14e-16 | 75.1 |
MS.gene006341.t1 | AT1G36060 | 48.810 | 84 | 32 | 1 | 18 | 90 | 142 | 225 | 1.31e-16 | 76.3 |
MS.gene006341.t1 | AT2G20880 | 36.220 | 127 | 68 | 2 | 1 | 127 | 171 | 284 | 1.33e-16 | 76.3 |
MS.gene006341.t1 | AT4G28140 | 57.627 | 59 | 25 | 0 | 18 | 76 | 142 | 200 | 1.66e-16 | 75.5 |
MS.gene006341.t1 | AT3G11020 | 56.061 | 66 | 29 | 0 | 13 | 78 | 72 | 137 | 2.97e-16 | 75.5 |
MS.gene006341.t1 | AT5G07580 | 52.632 | 76 | 33 | 2 | 13 | 87 | 106 | 179 | 3.41e-16 | 73.6 |
MS.gene006341.t1 | AT5G65130 | 52.000 | 75 | 34 | 1 | 4 | 76 | 94 | 168 | 7.16e-16 | 73.6 |
MS.gene006341.t1 | AT5G65130 | 52.000 | 75 | 34 | 1 | 4 | 76 | 96 | 170 | 8.10e-16 | 73.6 |
MS.gene006341.t1 | AT5G05410 | 60.714 | 56 | 22 | 0 | 19 | 74 | 79 | 134 | 1.46e-15 | 73.2 |
MS.gene006341.t1 | AT1G28370 | 60.714 | 56 | 22 | 0 | 19 | 74 | 20 | 75 | 1.55e-15 | 70.9 |
MS.gene006341.t1 | AT5G05410 | 60.714 | 56 | 22 | 0 | 19 | 74 | 79 | 134 | 1.81e-15 | 73.2 |
MS.gene006341.t1 | AT1G78080 | 59.322 | 59 | 24 | 0 | 18 | 76 | 151 | 209 | 2.06e-15 | 73.2 |
MS.gene006341.t1 | AT1G28370 | 60.714 | 56 | 22 | 0 | 19 | 74 | 58 | 113 | 2.11e-15 | 71.2 |
MS.gene006341.t1 | AT1G22810 | 35.556 | 135 | 69 | 3 | 19 | 145 | 14 | 138 | 2.17e-15 | 69.7 |
MS.gene006341.t1 | AT3G57600 | 58.929 | 56 | 23 | 0 | 19 | 74 | 28 | 83 | 2.57e-15 | 72.0 |
MS.gene006341.t1 | AT5G25390 | 57.143 | 56 | 24 | 0 | 19 | 74 | 7 | 62 | 3.42e-15 | 70.5 |
MS.gene006341.t1 | AT5G61890 | 56.667 | 60 | 24 | 1 | 15 | 74 | 88 | 145 | 3.48e-15 | 71.2 |
MS.gene006341.t1 | AT4G31060 | 52.308 | 65 | 30 | 1 | 19 | 82 | 27 | 91 | 3.70e-15 | 70.1 |
MS.gene006341.t1 | AT4G27950 | 57.895 | 57 | 24 | 0 | 19 | 75 | 118 | 174 | 4.03e-15 | 72.0 |
MS.gene006341.t1 | AT5G13330 | 54.839 | 62 | 26 | 1 | 15 | 76 | 37 | 96 | 4.17e-15 | 70.5 |
MS.gene006341.t1 | AT1G15360 | 58.929 | 56 | 23 | 0 | 19 | 74 | 7 | 62 | 4.30e-15 | 70.5 |
MS.gene006341.t1 | AT1G15360 | 58.929 | 56 | 23 | 0 | 19 | 74 | 7 | 62 | 4.30e-15 | 70.5 |
MS.gene006341.t1 | AT1G28360 | 51.351 | 74 | 29 | 1 | 19 | 92 | 12 | 78 | 5.41e-15 | 69.7 |
MS.gene006341.t1 | AT4G11140 | 57.143 | 56 | 24 | 0 | 19 | 74 | 87 | 142 | 6.17e-15 | 71.2 |
MS.gene006341.t1 | AT5G43410 | 55.000 | 60 | 26 | 1 | 16 | 74 | 12 | 71 | 6.79e-15 | 68.2 |
MS.gene006341.t1 | AT3G15210 | 60.714 | 56 | 22 | 0 | 19 | 74 | 25 | 80 | 7.20e-15 | 70.1 |
MS.gene006341.t1 | AT1G03800 | 52.941 | 68 | 29 | 1 | 7 | 74 | 44 | 108 | 7.51e-15 | 70.5 |
MS.gene006341.t1 | AT1G71520 | 40.625 | 96 | 48 | 3 | 13 | 102 | 8 | 100 | 8.02e-15 | 68.2 |
MS.gene006341.t1 | AT5G61600 | 60.656 | 61 | 21 | 2 | 15 | 74 | 86 | 144 | 8.40e-15 | 70.1 |
MS.gene006341.t1 | AT5G44210 | 58.929 | 56 | 23 | 0 | 19 | 74 | 33 | 88 | 1.19e-14 | 69.3 |
MS.gene006341.t1 | AT5G51190 | 57.143 | 63 | 24 | 2 | 13 | 74 | 68 | 128 | 1.19e-14 | 69.7 |
MS.gene006341.t1 | AT1G75490 | 50.000 | 72 | 36 | 0 | 18 | 89 | 41 | 112 | 1.68e-14 | 68.9 |
MS.gene006341.t1 | AT5G19790 | 48.684 | 76 | 35 | 2 | 2 | 76 | 7 | 79 | 1.74e-14 | 69.7 |
MS.gene006341.t1 | AT3G61630 | 48.101 | 79 | 35 | 1 | 19 | 97 | 105 | 177 | 1.89e-14 | 70.1 |
MS.gene006341.t1 | AT1G72360 | 53.571 | 56 | 26 | 0 | 19 | 74 | 25 | 80 | 2.35e-14 | 68.6 |
MS.gene006341.t1 | AT1G77640 | 45.455 | 99 | 44 | 2 | 19 | 107 | 43 | 141 | 4.20e-14 | 68.6 |
MS.gene006341.t1 | AT5G47230 | 57.143 | 63 | 24 | 2 | 13 | 74 | 152 | 212 | 4.38e-14 | 68.9 |
MS.gene006341.t1 | AT3G23230 | 51.613 | 62 | 29 | 1 | 19 | 79 | 20 | 81 | 5.21e-14 | 66.2 |
MS.gene006341.t1 | AT5G18450 | 49.351 | 77 | 36 | 1 | 1 | 74 | 13 | 89 | 6.21e-14 | 68.6 |
MS.gene006341.t1 | AT5G53290 | 56.140 | 57 | 25 | 0 | 19 | 75 | 125 | 181 | 6.47e-14 | 68.9 |
MS.gene006341.t1 | AT1G72360 | 53.571 | 56 | 26 | 0 | 19 | 74 | 76 | 131 | 6.76e-14 | 68.2 |
MS.gene006341.t1 | AT1G72360 | 53.571 | 56 | 26 | 0 | 19 | 74 | 74 | 129 | 6.83e-14 | 68.2 |
MS.gene006341.t1 | AT4G23750 | 54.386 | 57 | 26 | 0 | 19 | 75 | 122 | 178 | 9.51e-14 | 68.6 |
MS.gene006341.t1 | AT4G23750 | 54.386 | 57 | 26 | 0 | 19 | 75 | 122 | 178 | 9.51e-14 | 68.6 |
MS.gene006341.t1 | AT2G44840 | 57.895 | 57 | 23 | 1 | 19 | 74 | 92 | 148 | 2.39e-13 | 66.2 |
MS.gene006341.t1 | AT2G40340 | 57.143 | 56 | 24 | 0 | 19 | 74 | 14 | 69 | 2.53e-13 | 66.6 |
MS.gene006341.t1 | AT2G40340 | 57.143 | 56 | 24 | 0 | 19 | 74 | 14 | 69 | 2.53e-13 | 66.6 |
MS.gene006341.t1 | AT2G40340 | 57.143 | 56 | 24 | 0 | 19 | 74 | 14 | 69 | 2.53e-13 | 66.6 |
MS.gene006341.t1 | AT5G61590 | 52.381 | 84 | 37 | 2 | 5 | 87 | 95 | 176 | 3.03e-13 | 65.5 |
MS.gene006341.t1 | AT2G40340 | 57.143 | 56 | 24 | 0 | 19 | 74 | 72 | 127 | 4.97e-13 | 66.2 |
MS.gene006341.t1 | AT5G25190 | 58.929 | 56 | 23 | 0 | 19 | 74 | 8 | 63 | 5.04e-13 | 64.3 |
MS.gene006341.t1 | AT2G40340 | 57.143 | 56 | 24 | 0 | 19 | 74 | 72 | 127 | 5.75e-13 | 66.2 |
MS.gene006341.t1 | AT2G46310 | 53.571 | 56 | 26 | 0 | 19 | 74 | 99 | 154 | 6.26e-13 | 65.9 |
MS.gene006341.t1 | AT2G40340 | 57.143 | 56 | 24 | 0 | 19 | 74 | 79 | 134 | 6.26e-13 | 66.2 |
MS.gene006341.t1 | AT3G20310 | 53.226 | 62 | 29 | 0 | 13 | 74 | 21 | 82 | 8.11e-13 | 65.1 |
MS.gene006341.t1 | AT5G47220 | 56.140 | 57 | 24 | 1 | 19 | 74 | 117 | 173 | 1.01e-12 | 64.7 |
MS.gene006341.t1 | AT4G17490 | 55.556 | 63 | 25 | 2 | 13 | 74 | 133 | 193 | 1.07e-12 | 65.1 |
MS.gene006341.t1 | AT5G25390 | 53.571 | 56 | 23 | 1 | 19 | 74 | 7 | 59 | 1.18e-12 | 63.5 |
MS.gene006341.t1 | AT5G64750 | 45.205 | 73 | 39 | 1 | 26 | 98 | 192 | 263 | 1.20e-12 | 65.5 |
MS.gene006341.t1 | AT3G23240 | 51.724 | 58 | 27 | 1 | 19 | 75 | 82 | 139 | 1.49e-12 | 63.9 |
MS.gene006341.t1 | AT1G50640 | 57.143 | 56 | 24 | 0 | 19 | 74 | 28 | 83 | 3.75e-12 | 62.8 |
MS.gene006341.t1 | AT1G43160 | 42.857 | 91 | 43 | 1 | 19 | 109 | 61 | 142 | 5.25e-12 | 62.0 |
MS.gene006341.t1 | AT2G40350 | 51.786 | 56 | 27 | 0 | 19 | 74 | 74 | 129 | 7.85e-12 | 60.8 |
MS.gene006341.t1 | AT2G40350 | 51.786 | 56 | 27 | 0 | 19 | 74 | 67 | 122 | 9.33e-12 | 60.5 |
MS.gene006341.t1 | AT4G17500 | 56.140 | 57 | 24 | 1 | 19 | 74 | 148 | 204 | 1.15e-11 | 62.0 |
MS.gene006341.t1 | AT5G07310 | 54.688 | 64 | 27 | 1 | 15 | 78 | 90 | 151 | 2.94e-11 | 60.8 |
MS.gene006341.t1 | AT2G40220 | 53.846 | 78 | 25 | 2 | 3 | 75 | 40 | 111 | 3.13e-11 | 61.2 |
MS.gene006341.t1 | AT1G12980 | 55.357 | 56 | 25 | 0 | 19 | 74 | 57 | 112 | 3.91e-11 | 60.8 |
MS.gene006341.t1 | AT1G12890 | 45.833 | 72 | 36 | 1 | 3 | 74 | 8 | 76 | 4.75e-11 | 59.7 |
MS.gene006341.t1 | AT1G24590 | 54.386 | 57 | 26 | 0 | 19 | 75 | 58 | 114 | 6.75e-11 | 60.1 |
Find 69 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGAAGCAGCGGAGGCTTTC+AGG | 0.195098 | 1.1:+73143111 | MS.gene006341:CDS |
AAATGTTCCTAGCCAAATTC+TGG | 0.270820 | 1.1:-73142943 | None:intergenic |
TAATGTCACCGGCGCATTAC+TGG | 0.292563 | 1.1:+73143270 | MS.gene006341:CDS |
CTAACAAGAAAACCAGAATT+TGG | 0.316764 | 1.1:+73142931 | MS.gene006341:CDS |
TACTTCACAAACCCACTTCC+CGG | 0.346344 | 1.1:-73142901 | None:intergenic |
GGTGTAAGAAAGAGGGATTC+CGG | 0.391507 | 1.1:+73142882 | MS.gene006341:CDS |
TTCCTCCCTGCACGCTTCTT+CGG | 0.394846 | 1.1:-73142825 | None:intergenic |
CCCTGCACGCTTCTTCGGCA+TGG | 0.395018 | 1.1:-73142820 | None:intergenic |
TGATTCTGCATGGAGGTTGC+CGG | 0.397988 | 1.1:+73143046 | MS.gene006341:CDS |
TGAGAATAGTGAGGAGAGGA+AGG | 0.400657 | 1.1:+73143148 | MS.gene006341:CDS |
TGCATGGAGGTTGCCGGTCC+CGG | 0.406873 | 1.1:+73143052 | MS.gene006341:CDS |
TCCCTTGCATCCGCCGTAGC+CGG | 0.418270 | 1.1:-73143071 | None:intergenic |
CCCTTGCATCCGCCGTAGCC+GGG | 0.437662 | 1.1:-73143070 | None:intergenic |
AATGTCACCGGCGCATTACT+GGG | 0.441360 | 1.1:+73143271 | MS.gene006341:CDS |
TCCCGGCTACGGCGGATGCA+AGG | 0.444353 | 1.1:+73143069 | MS.gene006341:CDS |
CGGCGATTGCGTTGAGGGGA+AGG | 0.448014 | 1.1:+73143003 | MS.gene006341:CDS |
TGTTGCGGCGATTGCGTTGA+GGG | 0.456555 | 1.1:+73142998 | MS.gene006341:CDS |
TGTGCACGCGCCGCCATCTC+CGG | 0.457729 | 1.1:-73142972 | None:intergenic |
GAGGTTGCCGGTCCCGGCTA+CGG | 0.458126 | 1.1:+73143058 | MS.gene006341:CDS |
GAAAGAGGGATTCCGGGAAG+TGG | 0.469069 | 1.1:+73142889 | MS.gene006341:CDS |
GTGTAAGAAAGAGGGATTCC+GGG | 0.472104 | 1.1:+73142883 | MS.gene006341:CDS |
ACCATGCCGAAGAAGCGTGC+AGG | 0.492135 | 1.1:+73142819 | None:intergenic |
ATCTTCATCAACGGTGGCGG+TGG | 0.493317 | 1.1:+73143178 | MS.gene006341:CDS |
GCATCCGCCGTAGCCGGGAC+CGG | 0.500997 | 1.1:-73143065 | None:intergenic |
TTAACTTTGCTGATTCTGCA+TGG | 0.509932 | 1.1:+73143036 | MS.gene006341:CDS |
GGCAGCGGCTGAAGCAGCGG+AGG | 0.523238 | 1.1:+73143103 | MS.gene006341:CDS |
AACGGTGGCGGTGGCAGAGA+CGG | 0.527041 | 1.1:+73143187 | MS.gene006341:CDS |
AGCAGCGGAGGCTTTCAGGC+CGG | 0.528349 | 1.1:+73143115 | MS.gene006341:CDS |
CTATTCTCAAACACACTCTC+CGG | 0.531530 | 1.1:-73143134 | None:intergenic |
GGCGCGTGCACACGATGTTG+CGG | 0.533716 | 1.1:+73142983 | MS.gene006341:CDS |
GGATGCAAGGGATATTCAAA+AGG | 0.537449 | 1.1:+73143082 | MS.gene006341:CDS |
CCCGGCTACGGCGGATGCAA+GGG | 0.539749 | 1.1:+73143070 | MS.gene006341:CDS |
AAAGGCAGCGGCTGAAGCAG+CGG | 0.546461 | 1.1:+73143100 | MS.gene006341:CDS |
TTTCTTACACCACGGTACAC+AGG | 0.547271 | 1.1:-73142870 | None:intergenic |
AACATTTCCTACACCGGAGA+TGG | 0.553530 | 1.1:+73142959 | MS.gene006341:CDS |
GGAAGAAGAGGATACAGTGC+CGG | 0.556549 | 1.1:+73143226 | MS.gene006341:CDS |
CATTACTGGGGAAGTGATTG+TGG | 0.556769 | 1.1:+73143284 | MS.gene006341:CDS |
TTCTTACACCACGGTACACA+GGG | 0.559006 | 1.1:-73142869 | None:intergenic |
TGTTTGAGAATAGTGAGGAG+AGG | 0.563589 | 1.1:+73143144 | MS.gene006341:CDS |
GGCGGTGGCAGAGACGGTGA+TGG | 0.567449 | 1.1:+73143193 | MS.gene006341:CDS |
TGTACCGTGGTGTAAGAAAG+AGG | 0.571377 | 1.1:+73142874 | MS.gene006341:CDS |
CCATGCCGAAGAAGCGTGCA+GGG | 0.575137 | 1.1:+73142820 | None:intergenic |
CGCGCCGCCATCTCCGGTGT+AGG | 0.575941 | 1.1:-73142966 | None:intergenic |
ATGTTGCGGCGATTGCGTTG+AGG | 0.577679 | 1.1:+73142997 | MS.gene006341:CDS |
TGAATCTTCATCAACGGTGG+CGG | 0.578115 | 1.1:+73143175 | MS.gene006341:CDS |
GCTAGGAACATTTCCTACAC+CGG | 0.580013 | 1.1:+73142953 | MS.gene006341:CDS |
TGATTGTGGTGTTGCTGACG+TGG | 0.581354 | 1.1:+73143298 | MS.gene006341:CDS |
AAAGAGGGATTCCGGGAAGT+GGG | 0.584020 | 1.1:+73142890 | MS.gene006341:CDS |
GGAGCAACGAGAGGAAGAAG+AGG | 0.590815 | 1.1:+73143214 | MS.gene006341:CDS |
GAGTGTGTTTGAGAATAGTG+AGG | 0.597791 | 1.1:+73143139 | MS.gene006341:CDS |
GACGGTGATGGAGCAACGAG+AGG | 0.599901 | 1.1:+73143205 | MS.gene006341:CDS |
GTTGCGGCGATTGCGTTGAG+GGG | 0.602263 | 1.1:+73142999 | MS.gene006341:CDS |
AAACATGGTGCTAATGTCAC+CGG | 0.605887 | 1.1:+73143259 | MS.gene006341:CDS |
TCACTTCCCCAGTAATGCGC+CGG | 0.608520 | 1.1:-73143278 | None:intergenic |
GTTGCCGGTCCCGGCTACGG+CGG | 0.611596 | 1.1:+73143061 | MS.gene006341:CDS |
AAGAAAACCAGAATTTGGCT+AGG | 0.617595 | 1.1:+73142936 | MS.gene006341:CDS |
ATTTCCTACACCGGAGATGG+CGG | 0.619014 | 1.1:+73142962 | MS.gene006341:CDS |
ACCATGTTTCTCAAATACTC+CGG | 0.621228 | 1.1:-73143245 | None:intergenic |
AAGGGATATTCAAAAGGCAG+CGG | 0.629815 | 1.1:+73143088 | MS.gene006341:CDS |
GCCGGAGTATTTGAGAAACA+TGG | 0.640169 | 1.1:+73143244 | MS.gene006341:CDS |
ATGAAACTGAAATTTCATTG+TGG | 0.640236 | 1.1:+73143327 | MS.gene006341:CDS |
ATGTCACCGGCGCATTACTG+GGG | 0.644709 | 1.1:+73143272 | MS.gene006341:CDS |
GTACCGTGGTGTAAGAAAGA+GGG | 0.653532 | 1.1:+73142875 | MS.gene006341:CDS |
GGATAGTGAATCTTCATCAA+CGG | 0.654948 | 1.1:+73143169 | MS.gene006341:CDS |
ACTTTGCTGATTCTGCATGG+AGG | 0.660377 | 1.1:+73143039 | MS.gene006341:CDS |
AATCCCTCTTTCTTACACCA+CGG | 0.672149 | 1.1:-73142878 | None:intergenic |
TAGTGAATCTTCATCAACGG+TGG | 0.690170 | 1.1:+73143172 | MS.gene006341:CDS |
ACACGTCACCCTGTGTACCG+TGG | 0.702884 | 1.1:+73142861 | MS.gene006341:CDS |
TGCCGAAGAAGCGTGCAGGG+AGG | 0.724564 | 1.1:+73142823 | MS.gene006341:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | ATGAAACTGAAATTTCATTG+TGG | + | chr1.1:73143327-73143346 | MS.gene006341:CDS | 25.0% |
CTAACAAGAAAACCAGAATT+TGG | + | chr1.1:73142931-73142950 | MS.gene006341:CDS | 30.0% | |
!!! | CAAATTCTGGTTTTCTTGTT+AGG | - | chr1.1:73142933-73142952 | None:intergenic | 30.0% |
AAATGTTCCTAGCCAAATTC+TGG | - | chr1.1:73142946-73142965 | None:intergenic | 35.0% | |
AAGAAAACCAGAATTTGGCT+AGG | + | chr1.1:73142936-73142955 | MS.gene006341:CDS | 35.0% | |
ACCATGTTTCTCAAATACTC+CGG | - | chr1.1:73143248-73143267 | None:intergenic | 35.0% | |
GGATAGTGAATCTTCATCAA+CGG | + | chr1.1:73143169-73143188 | MS.gene006341:CDS | 35.0% | |
!! | TTAACTTTGCTGATTCTGCA+TGG | + | chr1.1:73143036-73143055 | MS.gene006341:CDS | 35.0% |
AAGGGATATTCAAAAGGCAG+CGG | + | chr1.1:73143088-73143107 | MS.gene006341:CDS | 40.0% | |
AATCCCTCTTTCTTACACCA+CGG | - | chr1.1:73142881-73142900 | None:intergenic | 40.0% | |
CTATTCTCAAACACACTCTC+CGG | - | chr1.1:73143137-73143156 | None:intergenic | 40.0% | |
GAGTGTGTTTGAGAATAGTG+AGG | + | chr1.1:73143139-73143158 | MS.gene006341:CDS | 40.0% | |
GGATGCAAGGGATATTCAAA+AGG | + | chr1.1:73143082-73143101 | MS.gene006341:CDS | 40.0% | |
TAGTGAATCTTCATCAACGG+TGG | + | chr1.1:73143172-73143191 | MS.gene006341:CDS | 40.0% | |
TGTTTGAGAATAGTGAGGAG+AGG | + | chr1.1:73143144-73143163 | MS.gene006341:CDS | 40.0% | |
! | AAACATGGTGCTAATGTCAC+CGG | + | chr1.1:73143259-73143278 | MS.gene006341:CDS | 40.0% |
AACATTTCCTACACCGGAGA+TGG | + | chr1.1:73142959-73142978 | MS.gene006341:CDS | 45.0% | |
CATTACTGGGGAAGTGATTG+TGG | + | chr1.1:73143284-73143303 | MS.gene006341:CDS | 45.0% | |
GCTAGGAACATTTCCTACAC+CGG | + | chr1.1:73142953-73142972 | MS.gene006341:CDS | 45.0% | |
GGTGTAAGAAAGAGGGATTC+CGG | + | chr1.1:73142882-73142901 | MS.gene006341:CDS | 45.0% | |
GTACCGTGGTGTAAGAAAGA+GGG | + | chr1.1:73142875-73142894 | MS.gene006341:CDS | 45.0% | |
GTGTAAGAAAGAGGGATTCC+GGG | + | chr1.1:73142883-73142902 | MS.gene006341:CDS | 45.0% | |
TACTTCACAAACCCACTTCC+CGG | - | chr1.1:73142904-73142923 | None:intergenic | 45.0% | |
TGAATCTTCATCAACGGTGG+CGG | + | chr1.1:73143175-73143194 | MS.gene006341:CDS | 45.0% | |
TGAGAATAGTGAGGAGAGGA+AGG | + | chr1.1:73143148-73143167 | MS.gene006341:CDS | 45.0% | |
TGTACCGTGGTGTAAGAAAG+AGG | + | chr1.1:73142874-73142893 | MS.gene006341:CDS | 45.0% | |
TTCTTACACCACGGTACACA+GGG | - | chr1.1:73142872-73142891 | None:intergenic | 45.0% | |
TTTCTTACACCACGGTACAC+AGG | - | chr1.1:73142873-73142892 | None:intergenic | 45.0% | |
! | GCCGGAGTATTTGAGAAACA+TGG | + | chr1.1:73143244-73143263 | MS.gene006341:CDS | 45.0% |
!! | ACTTTGCTGATTCTGCATGG+AGG | + | chr1.1:73143039-73143058 | MS.gene006341:CDS | 45.0% |
AAAGAGGGATTCCGGGAAGT+GGG | + | chr1.1:73142890-73142909 | MS.gene006341:CDS | 50.0% | |
AATGTCACCGGCGCATTACT+GGG | + | chr1.1:73143271-73143290 | MS.gene006341:CDS | 50.0% | |
ATTTCCTACACCGGAGATGG+CGG | + | chr1.1:73142962-73142981 | MS.gene006341:CDS | 50.0% | |
GGAAGAAGAGGATACAGTGC+CGG | + | chr1.1:73143226-73143245 | MS.gene006341:CDS | 50.0% | |
TAATGTCACCGGCGCATTAC+TGG | + | chr1.1:73143270-73143289 | MS.gene006341:CDS | 50.0% | |
TGATTCTGCATGGAGGTTGC+CGG | + | chr1.1:73143046-73143065 | MS.gene006341:CDS | 50.0% | |
!! | TGATTGTGGTGTTGCTGACG+TGG | + | chr1.1:73143298-73143317 | MS.gene006341:CDS | 50.0% |
ATGTCACCGGCGCATTACTG+GGG | + | chr1.1:73143272-73143291 | MS.gene006341:CDS | 55.0% | |
ATGTTGCGGCGATTGCGTTG+AGG | + | chr1.1:73142997-73143016 | MS.gene006341:CDS | 55.0% | |
GAAAGAGGGATTCCGGGAAG+TGG | + | chr1.1:73142889-73142908 | MS.gene006341:CDS | 55.0% | |
GGAGCAACGAGAGGAAGAAG+AGG | + | chr1.1:73143214-73143233 | MS.gene006341:CDS | 55.0% | |
TCACTTCCCCAGTAATGCGC+CGG | - | chr1.1:73143281-73143300 | None:intergenic | 55.0% | |
TGTTGCGGCGATTGCGTTGA+GGG | + | chr1.1:73142998-73143017 | MS.gene006341:CDS | 55.0% | |
TTCCTCCCTGCACGCTTCTT+CGG | - | chr1.1:73142828-73142847 | None:intergenic | 55.0% | |
! | ATCTTCATCAACGGTGGCGG+TGG | + | chr1.1:73143178-73143197 | MS.gene006341:CDS | 55.0% |
AAAGGCAGCGGCTGAAGCAG+CGG | + | chr1.1:73143100-73143119 | MS.gene006341:CDS | 60.0% | |
ACACGTCACCCTGTGTACCG+TGG | + | chr1.1:73142861-73142880 | MS.gene006341:CDS | 60.0% | |
CTGAAGCAGCGGAGGCTTTC+AGG | + | chr1.1:73143111-73143130 | MS.gene006341:CDS | 60.0% | |
GTTGCGGCGATTGCGTTGAG+GGG | + | chr1.1:73142999-73143018 | MS.gene006341:CDS | 60.0% | |
!! | GACGGTGATGGAGCAACGAG+AGG | + | chr1.1:73143205-73143224 | MS.gene006341:CDS | 60.0% |
AGCAGCGGAGGCTTTCAGGC+CGG | + | chr1.1:73143115-73143134 | MS.gene006341:CDS | 65.0% | |
CGGCGATTGCGTTGAGGGGA+AGG | + | chr1.1:73143003-73143022 | MS.gene006341:CDS | 65.0% | |
GGCGCGTGCACACGATGTTG+CGG | + | chr1.1:73142983-73143002 | MS.gene006341:CDS | 65.0% | |
TCCCTTGCATCCGCCGTAGC+CGG | - | chr1.1:73143074-73143093 | None:intergenic | 65.0% | |
TGCATGGAGGTTGCCGGTCC+CGG | + | chr1.1:73143052-73143071 | MS.gene006341:CDS | 65.0% | |
! | AACGGTGGCGGTGGCAGAGA+CGG | + | chr1.1:73143187-73143206 | MS.gene006341:CDS | 65.0% |
! | TGCCGAAGAAGCGTGCAGGG+AGG | + | chr1.1:73142823-73142842 | MS.gene006341:CDS | 65.0% |
CCCGGCTACGGCGGATGCAA+GGG | + | chr1.1:73143070-73143089 | MS.gene006341:CDS | 70.0% | |
CCCTTGCATCCGCCGTAGCC+GGG | - | chr1.1:73143073-73143092 | None:intergenic | 70.0% | |
GAGGTTGCCGGTCCCGGCTA+CGG | + | chr1.1:73143058-73143077 | MS.gene006341:CDS | 70.0% | |
GGCGGTGGCAGAGACGGTGA+TGG | + | chr1.1:73143193-73143212 | MS.gene006341:CDS | 70.0% | |
TCCCGGCTACGGCGGATGCA+AGG | + | chr1.1:73143069-73143088 | MS.gene006341:CDS | 70.0% | |
TGTGCACGCGCCGCCATCTC+CGG | - | chr1.1:73142975-73142994 | None:intergenic | 70.0% | |
CGCGCCGCCATCTCCGGTGT+AGG | - | chr1.1:73142969-73142988 | None:intergenic | 75.0% | |
GCATCCGCCGTAGCCGGGAC+CGG | - | chr1.1:73143068-73143087 | None:intergenic | 75.0% | |
GGCAGCGGCTGAAGCAGCGG+AGG | + | chr1.1:73143103-73143122 | MS.gene006341:CDS | 75.0% | |
GTTGCCGGTCCCGGCTACGG+CGG | + | chr1.1:73143061-73143080 | MS.gene006341:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 73142822 | 73143364 | 73142822 | ID=MS.gene006341 |
chr1.1 | mRNA | 73142822 | 73143364 | 73142822 | ID=MS.gene006341.t1;Parent=MS.gene006341 |
chr1.1 | exon | 73142822 | 73143364 | 73142822 | ID=MS.gene006341.t1.exon1;Parent=MS.gene006341.t1 |
chr1.1 | CDS | 73142822 | 73143364 | 73142822 | ID=cds.MS.gene006341.t1;Parent=MS.gene006341.t1 |
Gene Sequence |
Protein sequence |