Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30844.t1 | AGR40689.1 | 86.9 | 191 | 25 | 0 | 4 | 194 | 8 | 198 | 3.70E-80 | 307.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30844.t1 | Q9M0L0 | 56.2 | 192 | 76 | 4 | 7 | 194 | 29 | 216 | 4.6e-47 | 189.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30844.t1 | S5LSR1 | 86.9 | 191 | 25 | 0 | 4 | 194 | 8 | 198 | 2.6e-80 | 307.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene30844.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056633 | MS.gene30844 | 0.803811 | 2.92E-49 | -1.69E-46 |
MS.gene059061 | MS.gene30844 | -0.803374 | 3.59E-49 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30844.t1 | MTR_6g465530 | 92.147 | 191 | 15 | 0 | 4 | 194 | 8 | 198 | 9.32e-114 | 322 |
MS.gene30844.t1 | MTR_6g465510 | 87.562 | 201 | 15 | 2 | 4 | 194 | 8 | 208 | 2.10e-104 | 299 |
MS.gene30844.t1 | MTR_6g465420 | 76.471 | 187 | 37 | 3 | 4 | 188 | 29 | 210 | 7.51e-101 | 292 |
MS.gene30844.t1 | MTR_6g465460 | 77.660 | 188 | 32 | 4 | 4 | 188 | 29 | 209 | 1.24e-99 | 289 |
MS.gene30844.t1 | MTR_6g465450 | 79.255 | 188 | 31 | 3 | 4 | 188 | 29 | 211 | 4.05e-97 | 282 |
MS.gene30844.t1 | MTR_6g466000 | 71.000 | 200 | 45 | 4 | 4 | 194 | 32 | 227 | 1.41e-95 | 277 |
MS.gene30844.t1 | MTR_6g465430 | 76.064 | 188 | 36 | 4 | 4 | 188 | 29 | 210 | 5.96e-93 | 271 |
MS.gene30844.t1 | MTR_6g465690 | 71.649 | 194 | 41 | 3 | 4 | 189 | 38 | 225 | 9.08e-90 | 264 |
MS.gene30844.t1 | MTR_6g466130 | 72.917 | 192 | 47 | 2 | 4 | 194 | 41 | 228 | 1.28e-88 | 259 |
MS.gene30844.t1 | MTR_6g465850 | 52.263 | 243 | 65 | 4 | 3 | 194 | 37 | 279 | 1.34e-69 | 213 |
MS.gene30844.t1 | MTR_1g101600 | 61.053 | 190 | 64 | 2 | 7 | 194 | 19 | 200 | 2.38e-69 | 210 |
MS.gene30844.t1 | MTR_6g465990 | 59.500 | 200 | 48 | 5 | 4 | 194 | 18 | 193 | 5.70e-67 | 203 |
MS.gene30844.t1 | MTR_6g466020 | 57.754 | 187 | 52 | 3 | 6 | 191 | 20 | 180 | 1.08e-61 | 189 |
MS.gene30844.t1 | MTR_5g010930 | 46.635 | 208 | 81 | 5 | 7 | 194 | 27 | 224 | 3.93e-53 | 169 |
MS.gene30844.t1 | MTR_5g010940 | 48.500 | 200 | 87 | 5 | 7 | 194 | 32 | 227 | 4.62e-50 | 162 |
MS.gene30844.t1 | MTR_4g102660 | 52.000 | 200 | 81 | 6 | 7 | 194 | 22 | 218 | 7.04e-50 | 161 |
MS.gene30844.t1 | MTR_5g010910 | 48.718 | 195 | 84 | 5 | 12 | 194 | 32 | 222 | 2.73e-49 | 159 |
MS.gene30844.t1 | MTR_8g006410 | 68.750 | 80 | 25 | 0 | 24 | 103 | 47 | 126 | 1.91e-34 | 121 |
MS.gene30844.t1 | MTR_3g110205 | 55.238 | 105 | 46 | 1 | 24 | 128 | 38 | 141 | 4.78e-34 | 119 |
MS.gene30844.t1 | MTR_2g085015 | 39.362 | 188 | 93 | 6 | 23 | 192 | 41 | 225 | 1.60e-32 | 117 |
MS.gene30844.t1 | MTR_7g046260 | 58.511 | 94 | 32 | 1 | 17 | 103 | 42 | 135 | 2.05e-31 | 114 |
MS.gene30844.t1 | MTR_7g117690 | 59.091 | 88 | 36 | 0 | 16 | 103 | 15 | 102 | 1.17e-30 | 110 |
MS.gene30844.t1 | MTR_5g012910 | 62.025 | 79 | 30 | 0 | 25 | 103 | 24 | 102 | 2.77e-30 | 109 |
MS.gene30844.t1 | MTR_2g101340 | 50.926 | 108 | 47 | 2 | 2 | 103 | 8 | 115 | 2.86e-29 | 107 |
MS.gene30844.t1 | MTR_8g013860 | 62.025 | 79 | 30 | 0 | 25 | 103 | 43 | 121 | 3.12e-29 | 107 |
MS.gene30844.t1 | MTR_8g102800 | 56.566 | 99 | 43 | 0 | 19 | 117 | 27 | 125 | 3.71e-29 | 108 |
MS.gene30844.t1 | MTR_6g088405 | 62.821 | 78 | 29 | 0 | 26 | 103 | 41 | 118 | 1.06e-28 | 107 |
MS.gene30844.t1 | MTR_8g027465 | 56.383 | 94 | 38 | 1 | 13 | 103 | 23 | 116 | 2.27e-28 | 104 |
MS.gene30844.t1 | MTR_4g100650 | 62.821 | 78 | 29 | 0 | 26 | 103 | 71 | 148 | 3.28e-27 | 103 |
MS.gene30844.t1 | MTR_4g102670 | 58.228 | 79 | 32 | 1 | 25 | 103 | 11 | 88 | 1.13e-25 | 97.8 |
MS.gene30844.t1 | MTR_4g035430 | 55.422 | 83 | 37 | 0 | 28 | 110 | 31 | 113 | 2.63e-24 | 95.5 |
MS.gene30844.t1 | MTR_6g088425 | 61.628 | 86 | 33 | 0 | 25 | 110 | 45 | 130 | 1.11e-23 | 94.4 |
MS.gene30844.t1 | MTR_1g006660 | 58.696 | 92 | 34 | 1 | 16 | 103 | 30 | 121 | 3.16e-23 | 93.6 |
MS.gene30844.t1 | MTR_5g008550 | 45.545 | 101 | 53 | 1 | 29 | 127 | 21 | 121 | 1.00e-19 | 82.8 |
MS.gene30844.t1 | MTR_5g008590 | 54.945 | 91 | 41 | 0 | 29 | 119 | 11 | 101 | 5.96e-19 | 80.5 |
MS.gene30844.t1 | MTR_5g008470 | 39.806 | 103 | 62 | 0 | 31 | 133 | 77 | 179 | 8.54e-18 | 77.4 |
MS.gene30844.t1 | MTR_2g435590 | 52.000 | 75 | 33 | 1 | 13 | 87 | 83 | 154 | 1.01e-17 | 79.0 |
MS.gene30844.t1 | MTR_1g014780 | 56.667 | 60 | 26 | 0 | 28 | 87 | 37 | 96 | 1.69e-17 | 77.8 |
MS.gene30844.t1 | MTR_8g090350 | 46.237 | 93 | 45 | 2 | 13 | 100 | 95 | 187 | 1.75e-17 | 78.6 |
MS.gene30844.t1 | MTR_1g060910 | 35.260 | 173 | 71 | 7 | 13 | 169 | 3 | 150 | 2.17e-17 | 76.3 |
MS.gene30844.t1 | MTR_1g101550 | 42.958 | 142 | 74 | 4 | 29 | 165 | 57 | 196 | 2.39e-17 | 77.4 |
MS.gene30844.t1 | MTR_3g102100 | 40.164 | 122 | 65 | 4 | 14 | 133 | 31 | 146 | 2.77e-17 | 75.9 |
MS.gene30844.t1 | MTR_5g083340 | 62.069 | 58 | 22 | 0 | 29 | 86 | 85 | 142 | 2.80e-17 | 79.0 |
MS.gene30844.t1 | MTR_7g020980 | 45.679 | 81 | 44 | 0 | 25 | 105 | 47 | 127 | 3.56e-17 | 75.5 |
MS.gene30844.t1 | MTR_7g021010 | 45.977 | 87 | 46 | 1 | 22 | 107 | 4 | 90 | 1.29e-16 | 73.2 |
MS.gene30844.t1 | MTR_2g105380 | 51.471 | 68 | 33 | 0 | 17 | 84 | 105 | 172 | 1.46e-16 | 77.0 |
MS.gene30844.t1 | MTR_1g019110 | 37.374 | 99 | 59 | 1 | 29 | 127 | 44 | 139 | 1.56e-16 | 73.9 |
MS.gene30844.t1 | MTR_1g014820 | 43.478 | 92 | 48 | 1 | 28 | 115 | 26 | 117 | 2.14e-16 | 75.5 |
MS.gene30844.t1 | MTR_3g074130 | 59.322 | 59 | 24 | 0 | 28 | 86 | 149 | 207 | 2.48e-16 | 75.9 |
MS.gene30844.t1 | MTR_2g043030 | 42.857 | 91 | 52 | 0 | 28 | 118 | 18 | 108 | 2.56e-16 | 73.9 |
MS.gene30844.t1 | MTR_7g021010 | 44.578 | 83 | 46 | 0 | 25 | 107 | 47 | 129 | 2.81e-16 | 73.2 |
MS.gene30844.t1 | MTR_1g090170 | 55.556 | 63 | 28 | 0 | 24 | 86 | 147 | 209 | 2.92e-16 | 75.5 |
MS.gene30844.t1 | MTR_1g087920 | 47.561 | 82 | 41 | 1 | 7 | 86 | 53 | 134 | 3.58e-16 | 75.1 |
MS.gene30844.t1 | MTR_1g014860 | 50.000 | 66 | 33 | 0 | 22 | 87 | 15 | 80 | 3.81e-16 | 73.9 |
MS.gene30844.t1 | MTR_5g062700 | 59.322 | 59 | 24 | 0 | 28 | 86 | 172 | 230 | 3.82e-16 | 75.9 |
MS.gene30844.t1 | MTR_2g043050 | 44.706 | 85 | 47 | 0 | 28 | 112 | 18 | 102 | 4.73e-16 | 73.6 |
MS.gene30844.t1 | MTR_5g083330 | 52.055 | 73 | 35 | 0 | 14 | 86 | 20 | 92 | 5.38e-16 | 74.7 |
MS.gene30844.t1 | MTR_1g090170 | 55.556 | 63 | 28 | 0 | 24 | 86 | 234 | 296 | 5.59e-16 | 75.5 |
MS.gene30844.t1 | MTR_3g105510 | 43.529 | 85 | 48 | 0 | 29 | 113 | 37 | 121 | 5.63e-16 | 73.9 |
MS.gene30844.t1 | MTR_8g092460 | 56.667 | 60 | 26 | 0 | 29 | 88 | 145 | 204 | 8.38e-16 | 74.3 |
MS.gene30844.t1 | MTR_5g016750 | 38.835 | 103 | 56 | 1 | 29 | 131 | 25 | 120 | 8.56e-16 | 72.0 |
MS.gene30844.t1 | MTR_2g090235 | 59.322 | 59 | 24 | 0 | 28 | 86 | 217 | 275 | 9.11e-16 | 74.7 |
MS.gene30844.t1 | MTR_4g078710 | 36.134 | 119 | 68 | 2 | 13 | 131 | 14 | 124 | 1.01e-15 | 72.8 |
MS.gene30844.t1 | MTR_4g086220 | 60.714 | 56 | 22 | 0 | 29 | 84 | 96 | 151 | 1.18e-15 | 72.8 |
MS.gene30844.t1 | MTR_2g089170 | 49.367 | 79 | 39 | 1 | 29 | 106 | 65 | 143 | 1.35e-15 | 71.6 |
MS.gene30844.t1 | MTR_3g053690 | 59.375 | 64 | 23 | 1 | 21 | 84 | 22 | 82 | 1.37e-15 | 72.4 |
MS.gene30844.t1 | MTR_1g014800 | 53.333 | 60 | 28 | 0 | 28 | 87 | 30 | 89 | 1.55e-15 | 72.4 |
MS.gene30844.t1 | MTR_2g078680 | 60.714 | 56 | 22 | 0 | 29 | 84 | 31 | 86 | 1.81e-15 | 71.6 |
MS.gene30844.t1 | MTR_1g028560 | 57.895 | 57 | 24 | 0 | 29 | 85 | 115 | 171 | 2.10e-15 | 73.6 |
MS.gene30844.t1 | MTR_5g082950 | 62.500 | 56 | 21 | 0 | 29 | 84 | 66 | 121 | 2.62e-15 | 73.2 |
MS.gene30844.t1 | MTR_4g086160 | 58.929 | 56 | 23 | 0 | 29 | 84 | 96 | 151 | 4.45e-15 | 71.2 |
MS.gene30844.t1 | MTR_4g086190 | 58.929 | 56 | 23 | 0 | 29 | 84 | 96 | 151 | 4.50e-15 | 71.2 |
MS.gene30844.t1 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 19 | 84 | 113 | 178 | 5.56e-15 | 72.4 |
MS.gene30844.t1 | MTR_4g086165 | 58.929 | 56 | 23 | 0 | 29 | 84 | 82 | 137 | 5.60e-15 | 70.5 |
MS.gene30844.t1 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 19 | 84 | 114 | 179 | 5.75e-15 | 72.4 |
MS.gene30844.t1 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 19 | 84 | 114 | 179 | 5.75e-15 | 72.4 |
MS.gene30844.t1 | MTR_1g074310 | 54.839 | 62 | 27 | 1 | 29 | 89 | 21 | 82 | 6.01e-15 | 68.9 |
MS.gene30844.t1 | MTR_0939s0010 | 58.929 | 56 | 23 | 0 | 29 | 84 | 65 | 120 | 6.27e-15 | 70.1 |
MS.gene30844.t1 | MTR_7g028925 | 50.000 | 66 | 30 | 1 | 22 | 87 | 22 | 84 | 7.36e-15 | 67.4 |
MS.gene30844.t1 | MTR_2g015050 | 52.174 | 69 | 32 | 1 | 17 | 84 | 122 | 190 | 9.19e-15 | 70.9 |
MS.gene30844.t1 | MTR_7g092190 | 60.714 | 56 | 22 | 0 | 29 | 84 | 30 | 85 | 1.15e-14 | 70.9 |
MS.gene30844.t1 | MTR_4g054740 | 42.697 | 89 | 45 | 2 | 1 | 88 | 74 | 157 | 1.44e-14 | 70.1 |
MS.gene30844.t1 | MTR_3g105480 | 43.373 | 83 | 47 | 0 | 31 | 113 | 33 | 115 | 1.47e-14 | 69.7 |
MS.gene30844.t1 | MTR_2g438180 | 56.452 | 62 | 26 | 1 | 29 | 89 | 14 | 75 | 2.68e-14 | 67.0 |
MS.gene30844.t1 | MTR_4g114570 | 57.143 | 56 | 24 | 0 | 29 | 84 | 7 | 62 | 3.04e-14 | 68.6 |
MS.gene30844.t1 | MTR_2g014340 | 57.143 | 56 | 24 | 0 | 29 | 84 | 19 | 74 | 4.55e-14 | 67.8 |
MS.gene30844.t1 | MTR_3g106290 | 60.714 | 56 | 22 | 0 | 29 | 84 | 8 | 63 | 5.36e-14 | 67.4 |
MS.gene30844.t1 | MTR_4g010640 | 57.143 | 56 | 24 | 0 | 29 | 84 | 7 | 62 | 5.37e-14 | 67.8 |
MS.gene30844.t1 | MTR_1g048610 | 56.140 | 57 | 24 | 1 | 29 | 84 | 89 | 145 | 6.79e-14 | 68.2 |
MS.gene30844.t1 | MTR_5g009620 | 50.667 | 75 | 27 | 2 | 16 | 84 | 97 | 167 | 7.67e-14 | 68.9 |
MS.gene30844.t1 | MTR_2g043040 | 42.353 | 85 | 49 | 0 | 28 | 112 | 18 | 102 | 8.91e-14 | 67.8 |
MS.gene30844.t1 | MTR_2g103700 | 53.333 | 60 | 28 | 0 | 29 | 88 | 7 | 66 | 9.15e-14 | 66.6 |
MS.gene30844.t1 | MTR_4g008860 | 60.714 | 56 | 22 | 0 | 29 | 84 | 8 | 63 | 1.09e-13 | 66.6 |
MS.gene30844.t1 | MTR_2g043020 | 40.659 | 91 | 54 | 0 | 28 | 118 | 18 | 108 | 1.26e-13 | 66.6 |
MS.gene30844.t1 | MTR_2g014300 | 58.929 | 56 | 23 | 0 | 29 | 84 | 15 | 70 | 1.59e-13 | 65.9 |
MS.gene30844.t1 | MTR_1g070070 | 56.140 | 57 | 24 | 1 | 29 | 84 | 21 | 77 | 1.65e-13 | 65.1 |
MS.gene30844.t1 | MTR_3g090760 | 33.871 | 124 | 82 | 0 | 29 | 152 | 113 | 236 | 1.72e-13 | 68.2 |
MS.gene30844.t1 | MTR_1g074230 | 57.895 | 57 | 23 | 1 | 29 | 84 | 19 | 75 | 1.92e-13 | 64.7 |
MS.gene30844.t1 | MTR_4g100420 | 54.167 | 72 | 30 | 2 | 29 | 99 | 157 | 226 | 2.33e-13 | 67.4 |
MS.gene30844.t1 | MTR_4g100450 | 46.250 | 80 | 42 | 1 | 6 | 84 | 131 | 210 | 2.52e-13 | 67.4 |
MS.gene30844.t1 | MTR_2g016730 | 41.758 | 91 | 47 | 2 | 18 | 107 | 11 | 96 | 4.10e-13 | 67.0 |
MS.gene30844.t1 | MTR_3g072610 | 48.315 | 89 | 42 | 2 | 29 | 113 | 25 | 113 | 4.57e-13 | 65.5 |
MS.gene30844.t1 | MTR_4g054360 | 45.122 | 82 | 39 | 2 | 8 | 88 | 108 | 184 | 5.71e-13 | 65.9 |
MS.gene30844.t1 | MTR_5g085100 | 48.684 | 76 | 36 | 1 | 9 | 84 | 29 | 101 | 1.22e-12 | 65.1 |
MS.gene30844.t1 | MTR_5g085070 | 41.509 | 106 | 59 | 1 | 22 | 127 | 47 | 149 | 1.46e-12 | 65.1 |
MS.gene30844.t1 | MTR_4g088005 | 47.826 | 69 | 35 | 1 | 17 | 84 | 45 | 113 | 1.49e-12 | 62.0 |
MS.gene30844.t1 | MTR_5g008540 | 47.541 | 61 | 32 | 0 | 31 | 91 | 26 | 86 | 2.24e-12 | 60.8 |
MS.gene30844.t1 | MTR_8g069360 | 53.571 | 56 | 26 | 0 | 29 | 84 | 44 | 99 | 2.51e-12 | 65.1 |
MS.gene30844.t1 | MTR_1g090290 | 51.613 | 62 | 27 | 2 | 24 | 84 | 110 | 169 | 2.88e-12 | 63.2 |
MS.gene30844.t1 | MTR_4g111915 | 47.458 | 59 | 31 | 0 | 29 | 87 | 53 | 111 | 2.92e-12 | 61.6 |
MS.gene30844.t1 | MTR_1g074250 | 50.820 | 61 | 28 | 1 | 26 | 84 | 16 | 76 | 3.29e-12 | 61.2 |
MS.gene30844.t1 | MTR_5g075570 | 48.333 | 60 | 31 | 0 | 25 | 84 | 120 | 179 | 4.24e-12 | 63.5 |
MS.gene30844.t1 | MTR_4g054860 | 44.706 | 85 | 41 | 3 | 5 | 88 | 112 | 191 | 4.47e-12 | 63.5 |
MS.gene30844.t1 | MTR_7g085810 | 43.243 | 74 | 41 | 1 | 29 | 102 | 30 | 102 | 7.72e-12 | 62.8 |
MS.gene30844.t1 | MTR_8g085960 | 43.421 | 76 | 40 | 2 | 29 | 102 | 25 | 99 | 8.16e-12 | 62.4 |
MS.gene30844.t1 | MTR_8g099215 | 46.914 | 81 | 34 | 2 | 13 | 84 | 82 | 162 | 8.25e-12 | 63.2 |
MS.gene30844.t1 | MTR_4g112490 | 47.458 | 59 | 31 | 0 | 29 | 87 | 53 | 111 | 8.99e-12 | 61.6 |
MS.gene30844.t1 | MTR_8g006840 | 52.632 | 57 | 26 | 1 | 29 | 84 | 125 | 181 | 1.01e-11 | 61.6 |
MS.gene30844.t1 | MTR_6g029180 | 47.222 | 72 | 37 | 1 | 17 | 88 | 22 | 92 | 1.05e-11 | 62.8 |
MS.gene30844.t1 | MTR_6g041970 | 40.698 | 86 | 38 | 1 | 29 | 114 | 18 | 90 | 1.23e-11 | 58.9 |
MS.gene30844.t1 | MTR_4g100380 | 56.140 | 57 | 24 | 1 | 29 | 84 | 145 | 201 | 1.76e-11 | 61.6 |
MS.gene30844.t1 | MTR_2g015040 | 52.632 | 57 | 26 | 1 | 29 | 84 | 63 | 119 | 1.93e-11 | 60.1 |
MS.gene30844.t1 | MTR_5g032820 | 55.357 | 56 | 25 | 0 | 29 | 84 | 46 | 101 | 2.02e-11 | 62.0 |
MS.gene30844.t1 | MTR_7g081805 | 52.632 | 57 | 26 | 1 | 29 | 84 | 61 | 117 | 2.27e-11 | 60.8 |
MS.gene30844.t1 | MTR_8g006815 | 52.632 | 57 | 26 | 1 | 29 | 84 | 96 | 152 | 2.29e-11 | 60.5 |
MS.gene30844.t1 | MTR_7g081815 | 52.632 | 57 | 26 | 1 | 29 | 84 | 61 | 117 | 2.55e-11 | 60.5 |
MS.gene30844.t1 | MTR_8g032610 | 52.727 | 55 | 26 | 0 | 31 | 85 | 29 | 83 | 2.68e-11 | 61.6 |
MS.gene30844.t1 | MTR_7g096750 | 54.386 | 57 | 25 | 1 | 29 | 84 | 20 | 76 | 4.42e-11 | 58.5 |
MS.gene30844.t1 | MTR_3g095190 | 54.795 | 73 | 32 | 1 | 29 | 100 | 170 | 242 | 4.63e-11 | 61.2 |
MS.gene30844.t1 | MTR_7g011630 | 45.833 | 72 | 36 | 1 | 13 | 84 | 29 | 97 | 5.08e-11 | 61.2 |
MS.gene30844.t1 | MTR_1g070020 | 39.130 | 92 | 53 | 2 | 19 | 109 | 60 | 149 | 6.60e-11 | 59.7 |
MS.gene30844.t1 | MTR_6g012970 | 51.786 | 56 | 27 | 0 | 29 | 84 | 38 | 93 | 7.41e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30844.t1 | AT4G25470 | 56.853 | 197 | 69 | 5 | 6 | 194 | 28 | 216 | 2.82e-69 | 210 |
MS.gene30844.t1 | AT4G25480 | 57.360 | 197 | 66 | 4 | 7 | 194 | 29 | 216 | 8.87e-65 | 199 |
MS.gene30844.t1 | AT5G51990 | 54.040 | 198 | 76 | 5 | 6 | 194 | 31 | 222 | 1.26e-62 | 194 |
MS.gene30844.t1 | AT4G25490 | 57.071 | 198 | 65 | 5 | 7 | 194 | 26 | 213 | 5.19e-62 | 192 |
MS.gene30844.t1 | AT1G12610 | 48.500 | 200 | 91 | 3 | 7 | 194 | 8 | 207 | 2.05e-54 | 172 |
MS.gene30844.t1 | AT1G63030 | 49.198 | 187 | 73 | 4 | 12 | 194 | 13 | 181 | 4.39e-54 | 170 |
MS.gene30844.t1 | AT1G63030 | 49.198 | 187 | 73 | 4 | 12 | 194 | 13 | 181 | 4.39e-54 | 170 |
MS.gene30844.t1 | AT5G25810 | 60.638 | 94 | 36 | 1 | 18 | 110 | 24 | 117 | 4.04e-34 | 120 |
MS.gene30844.t1 | AT5G11590 | 46.324 | 136 | 73 | 0 | 25 | 160 | 47 | 182 | 7.48e-33 | 118 |
MS.gene30844.t1 | AT4G32800 | 53.271 | 107 | 44 | 1 | 16 | 116 | 6 | 112 | 1.09e-31 | 114 |
MS.gene30844.t1 | AT2G35700 | 65.000 | 80 | 28 | 0 | 24 | 103 | 40 | 119 | 2.19e-31 | 113 |
MS.gene30844.t1 | AT2G44940 | 60.215 | 93 | 37 | 0 | 18 | 110 | 89 | 181 | 3.01e-31 | 115 |
MS.gene30844.t1 | AT2G36450 | 39.891 | 183 | 103 | 4 | 17 | 194 | 3 | 183 | 5.42e-30 | 109 |
MS.gene30844.t1 | AT4G16750 | 53.398 | 103 | 43 | 1 | 6 | 103 | 12 | 114 | 7.23e-30 | 108 |
MS.gene30844.t1 | AT1G01250 | 61.250 | 80 | 31 | 0 | 24 | 103 | 40 | 119 | 4.86e-29 | 107 |
MS.gene30844.t1 | AT3G16280 | 62.025 | 79 | 30 | 0 | 25 | 103 | 57 | 135 | 7.38e-29 | 107 |
MS.gene30844.t1 | AT3G16280 | 62.025 | 79 | 30 | 0 | 25 | 103 | 75 | 153 | 1.10e-28 | 107 |
MS.gene30844.t1 | AT5G52020 | 44.000 | 175 | 89 | 5 | 25 | 194 | 61 | 231 | 1.10e-27 | 104 |
MS.gene30844.t1 | AT3G60490 | 59.756 | 82 | 32 | 1 | 23 | 103 | 64 | 145 | 7.44e-27 | 103 |
MS.gene30844.t1 | AT2G25820 | 63.158 | 76 | 28 | 0 | 28 | 103 | 25 | 100 | 9.42e-27 | 102 |
MS.gene30844.t1 | AT1G71450 | 47.170 | 106 | 56 | 0 | 28 | 133 | 23 | 128 | 8.82e-24 | 93.2 |
MS.gene30844.t1 | AT1G33760 | 55.056 | 89 | 40 | 0 | 29 | 117 | 20 | 108 | 1.20e-20 | 85.1 |
MS.gene30844.t1 | AT1G21910 | 46.000 | 100 | 33 | 2 | 29 | 114 | 50 | 142 | 2.17e-20 | 85.5 |
MS.gene30844.t1 | AT2G47520 | 29.375 | 160 | 93 | 4 | 5 | 161 | 23 | 165 | 2.72e-20 | 84.0 |
MS.gene30844.t1 | AT1G77200 | 59.740 | 77 | 31 | 0 | 27 | 103 | 41 | 117 | 1.39e-19 | 83.6 |
MS.gene30844.t1 | AT1G12630 | 40.556 | 180 | 95 | 4 | 25 | 194 | 15 | 192 | 6.57e-19 | 80.5 |
MS.gene30844.t1 | AT1G46768 | 58.730 | 63 | 25 | 1 | 24 | 86 | 27 | 88 | 1.44e-18 | 78.6 |
MS.gene30844.t1 | AT1G46768 | 58.730 | 63 | 25 | 1 | 24 | 86 | 27 | 88 | 1.67e-18 | 78.6 |
MS.gene30844.t1 | AT1G46768 | 58.730 | 63 | 25 | 1 | 24 | 86 | 27 | 88 | 1.67e-18 | 78.6 |
MS.gene30844.t1 | AT4G06746 | 43.333 | 90 | 46 | 1 | 1 | 90 | 13 | 97 | 1.88e-18 | 78.6 |
MS.gene30844.t1 | AT4G13620 | 61.017 | 59 | 23 | 0 | 28 | 86 | 231 | 289 | 2.49e-18 | 82.0 |
MS.gene30844.t1 | AT2G22200 | 53.333 | 75 | 33 | 1 | 28 | 100 | 70 | 144 | 2.97e-18 | 80.5 |
MS.gene30844.t1 | AT3G16770 | 55.556 | 72 | 28 | 1 | 15 | 86 | 69 | 136 | 5.13e-18 | 79.3 |
MS.gene30844.t1 | AT4G39780 | 48.780 | 82 | 40 | 1 | 3 | 84 | 69 | 148 | 1.04e-17 | 79.0 |
MS.gene30844.t1 | AT1G22190 | 54.795 | 73 | 31 | 1 | 14 | 86 | 70 | 140 | 1.08e-17 | 79.0 |
MS.gene30844.t1 | AT5G21960 | 48.810 | 84 | 43 | 0 | 27 | 110 | 5 | 88 | 1.59e-17 | 77.4 |
MS.gene30844.t1 | AT3G11020 | 51.282 | 78 | 38 | 0 | 23 | 100 | 72 | 149 | 2.71e-17 | 78.6 |
MS.gene30844.t1 | AT5G65130 | 53.247 | 77 | 34 | 1 | 14 | 88 | 94 | 170 | 3.13e-17 | 77.8 |
MS.gene30844.t1 | AT5G65130 | 53.247 | 77 | 34 | 1 | 14 | 88 | 96 | 172 | 3.17e-17 | 77.8 |
MS.gene30844.t1 | AT2G33710 | 49.383 | 81 | 38 | 1 | 24 | 101 | 65 | 145 | 6.02e-17 | 75.9 |
MS.gene30844.t1 | AT1G74930 | 45.349 | 86 | 47 | 0 | 29 | 114 | 21 | 106 | 6.20e-17 | 75.5 |
MS.gene30844.t1 | AT2G33710 | 49.383 | 81 | 38 | 1 | 24 | 101 | 65 | 145 | 7.46e-17 | 75.9 |
MS.gene30844.t1 | AT1G78080 | 47.674 | 86 | 42 | 2 | 1 | 86 | 127 | 209 | 7.60e-17 | 77.4 |
MS.gene30844.t1 | AT4G36900 | 56.667 | 60 | 26 | 0 | 25 | 84 | 26 | 85 | 1.00e-16 | 75.1 |
MS.gene30844.t1 | AT3G50260 | 35.537 | 121 | 66 | 2 | 22 | 142 | 14 | 122 | 1.36e-16 | 73.6 |
MS.gene30844.t1 | AT2G23340 | 39.423 | 104 | 58 | 1 | 29 | 132 | 28 | 126 | 2.49e-16 | 73.6 |
MS.gene30844.t1 | AT5G67190 | 57.143 | 56 | 24 | 0 | 29 | 84 | 21 | 76 | 3.39e-16 | 73.2 |
MS.gene30844.t1 | AT1G19210 | 36.522 | 115 | 73 | 0 | 29 | 143 | 12 | 126 | 3.42e-16 | 73.2 |
MS.gene30844.t1 | AT5G05410 | 59.322 | 59 | 24 | 0 | 29 | 87 | 79 | 137 | 6.94e-16 | 74.3 |
MS.gene30844.t1 | AT5G05410 | 60.714 | 56 | 22 | 0 | 29 | 84 | 79 | 134 | 9.84e-16 | 74.3 |
MS.gene30844.t1 | AT1G36060 | 61.404 | 57 | 22 | 0 | 28 | 84 | 142 | 198 | 1.27e-15 | 73.9 |
MS.gene30844.t1 | AT4G28140 | 55.932 | 59 | 26 | 0 | 28 | 86 | 142 | 200 | 1.45e-15 | 73.6 |
MS.gene30844.t1 | AT2G20880 | 39.450 | 109 | 61 | 1 | 28 | 136 | 186 | 289 | 1.79e-15 | 73.6 |
MS.gene30844.t1 | AT3G15210 | 60.714 | 56 | 22 | 0 | 29 | 84 | 25 | 80 | 2.51e-15 | 71.6 |
MS.gene30844.t1 | AT5G13330 | 54.688 | 64 | 27 | 1 | 25 | 88 | 37 | 98 | 2.98e-15 | 71.2 |
MS.gene30844.t1 | AT3G57600 | 51.389 | 72 | 35 | 0 | 13 | 84 | 12 | 83 | 4.30e-15 | 72.0 |
MS.gene30844.t1 | AT5G07580 | 49.367 | 79 | 37 | 2 | 23 | 100 | 106 | 182 | 4.79e-15 | 70.9 |
MS.gene30844.t1 | AT5G61600 | 60.656 | 61 | 21 | 2 | 25 | 84 | 86 | 144 | 5.70e-15 | 71.2 |
MS.gene30844.t1 | AT5G61890 | 54.688 | 64 | 27 | 1 | 25 | 88 | 88 | 149 | 5.76e-15 | 71.2 |
MS.gene30844.t1 | AT5G44210 | 58.929 | 56 | 23 | 0 | 29 | 84 | 33 | 88 | 6.57e-15 | 70.1 |
MS.gene30844.t1 | AT1G75490 | 50.000 | 70 | 35 | 0 | 28 | 97 | 41 | 110 | 7.05e-15 | 70.1 |
MS.gene30844.t1 | AT1G03800 | 51.471 | 68 | 30 | 1 | 17 | 84 | 44 | 108 | 1.07e-14 | 70.5 |
MS.gene30844.t1 | AT5G64750 | 41.304 | 92 | 48 | 2 | 39 | 130 | 195 | 280 | 1.24e-14 | 71.6 |
MS.gene30844.t1 | AT5G51190 | 57.143 | 63 | 24 | 2 | 23 | 84 | 68 | 128 | 1.52e-14 | 69.7 |
MS.gene30844.t1 | AT1G72360 | 44.737 | 76 | 42 | 0 | 9 | 84 | 54 | 129 | 1.97e-14 | 70.1 |
MS.gene30844.t1 | AT1G15360 | 58.929 | 56 | 23 | 0 | 29 | 84 | 7 | 62 | 1.99e-14 | 68.9 |
MS.gene30844.t1 | AT1G15360 | 58.929 | 56 | 23 | 0 | 29 | 84 | 7 | 62 | 1.99e-14 | 68.9 |
MS.gene30844.t1 | AT5G47230 | 52.778 | 72 | 33 | 1 | 14 | 84 | 141 | 212 | 2.12e-14 | 70.5 |
MS.gene30844.t1 | AT1G72360 | 49.206 | 63 | 32 | 0 | 22 | 84 | 18 | 80 | 2.23e-14 | 68.9 |
MS.gene30844.t1 | AT5G43410 | 55.000 | 60 | 26 | 1 | 26 | 84 | 12 | 71 | 2.86e-14 | 67.0 |
MS.gene30844.t1 | AT4G11140 | 41.935 | 93 | 41 | 2 | 29 | 114 | 87 | 173 | 3.28e-14 | 69.7 |
MS.gene30844.t1 | AT4G27950 | 56.140 | 57 | 25 | 0 | 29 | 85 | 118 | 174 | 3.45e-14 | 70.1 |
MS.gene30844.t1 | AT1G71520 | 34.043 | 141 | 71 | 5 | 23 | 157 | 8 | 132 | 4.07e-14 | 67.0 |
MS.gene30844.t1 | AT1G72360 | 49.206 | 63 | 32 | 0 | 22 | 84 | 69 | 131 | 5.51e-14 | 68.6 |
MS.gene30844.t1 | AT5G25190 | 52.941 | 68 | 32 | 0 | 29 | 96 | 8 | 75 | 5.87e-14 | 67.4 |
MS.gene30844.t1 | AT3G61630 | 46.835 | 79 | 36 | 1 | 29 | 107 | 105 | 177 | 7.50e-14 | 68.9 |
MS.gene30844.t1 | AT1G22810 | 39.785 | 93 | 41 | 2 | 29 | 113 | 14 | 99 | 8.83e-14 | 65.9 |
MS.gene30844.t1 | AT5G25390 | 55.357 | 56 | 25 | 0 | 29 | 84 | 7 | 62 | 9.13e-14 | 67.0 |
MS.gene30844.t1 | AT1G43160 | 38.931 | 131 | 67 | 4 | 29 | 158 | 61 | 179 | 9.61e-14 | 67.0 |
MS.gene30844.t1 | AT3G23230 | 51.613 | 62 | 29 | 1 | 29 | 89 | 20 | 81 | 9.67e-14 | 65.9 |
MS.gene30844.t1 | AT4G31060 | 41.463 | 82 | 44 | 1 | 7 | 84 | 1 | 82 | 1.04e-13 | 66.6 |
MS.gene30844.t1 | AT3G20310 | 53.226 | 62 | 29 | 0 | 23 | 84 | 21 | 82 | 2.94e-13 | 66.6 |
MS.gene30844.t1 | AT2G40340 | 46.479 | 71 | 38 | 0 | 29 | 99 | 14 | 84 | 3.71e-13 | 66.6 |
MS.gene30844.t1 | AT2G40340 | 46.479 | 71 | 38 | 0 | 29 | 99 | 14 | 84 | 3.71e-13 | 66.6 |
MS.gene30844.t1 | AT2G40340 | 46.479 | 71 | 38 | 0 | 29 | 99 | 14 | 84 | 3.71e-13 | 66.6 |
MS.gene30844.t1 | AT2G40340 | 33.858 | 127 | 77 | 2 | 29 | 155 | 72 | 191 | 4.28e-13 | 66.6 |
MS.gene30844.t1 | AT5G53290 | 54.386 | 57 | 26 | 0 | 29 | 85 | 125 | 181 | 4.51e-13 | 67.0 |
MS.gene30844.t1 | AT1G28370 | 55.357 | 56 | 25 | 0 | 29 | 84 | 20 | 75 | 5.33e-13 | 64.3 |
MS.gene30844.t1 | AT5G18450 | 46.250 | 80 | 39 | 1 | 5 | 84 | 14 | 89 | 5.36e-13 | 66.6 |
MS.gene30844.t1 | AT1G28360 | 48.649 | 74 | 31 | 1 | 29 | 102 | 12 | 78 | 5.83e-13 | 64.7 |
MS.gene30844.t1 | AT4G17490 | 48.780 | 82 | 37 | 3 | 6 | 84 | 114 | 193 | 6.80e-13 | 65.9 |
MS.gene30844.t1 | AT1G28370 | 55.357 | 56 | 25 | 0 | 29 | 84 | 58 | 113 | 7.69e-13 | 64.7 |
MS.gene30844.t1 | AT2G40340 | 46.479 | 71 | 38 | 0 | 29 | 99 | 72 | 142 | 7.98e-13 | 66.2 |
MS.gene30844.t1 | AT2G40340 | 46.479 | 71 | 38 | 0 | 29 | 99 | 79 | 149 | 8.35e-13 | 66.2 |
MS.gene30844.t1 | AT4G23750 | 52.632 | 57 | 27 | 0 | 29 | 85 | 122 | 178 | 1.10e-12 | 65.9 |
MS.gene30844.t1 | AT4G23750 | 52.632 | 57 | 27 | 0 | 29 | 85 | 122 | 178 | 1.10e-12 | 65.9 |
MS.gene30844.t1 | AT1G50640 | 57.143 | 56 | 24 | 0 | 29 | 84 | 28 | 83 | 1.62e-12 | 64.3 |
MS.gene30844.t1 | AT5G47220 | 56.140 | 57 | 24 | 1 | 29 | 84 | 117 | 173 | 2.17e-12 | 63.9 |
MS.gene30844.t1 | AT2G46310 | 51.786 | 56 | 27 | 0 | 29 | 84 | 99 | 154 | 2.36e-12 | 64.7 |
MS.gene30844.t1 | AT5G19790 | 53.448 | 58 | 27 | 0 | 29 | 86 | 22 | 79 | 2.80e-12 | 63.9 |
MS.gene30844.t1 | AT1G12890 | 44.872 | 78 | 40 | 1 | 7 | 84 | 2 | 76 | 3.82e-12 | 63.2 |
MS.gene30844.t1 | AT1G77640 | 45.556 | 90 | 43 | 1 | 29 | 112 | 43 | 132 | 5.57e-12 | 63.2 |
MS.gene30844.t1 | AT5G61590 | 51.250 | 80 | 36 | 2 | 19 | 97 | 99 | 176 | 9.12e-12 | 61.6 |
MS.gene30844.t1 | AT4G17500 | 56.140 | 57 | 24 | 1 | 29 | 84 | 148 | 204 | 1.46e-11 | 62.0 |
MS.gene30844.t1 | AT3G23240 | 50.000 | 58 | 28 | 1 | 29 | 85 | 82 | 139 | 1.53e-11 | 61.2 |
MS.gene30844.t1 | AT1G24590 | 50.769 | 65 | 29 | 1 | 29 | 93 | 58 | 119 | 2.23e-11 | 62.0 |
MS.gene30844.t1 | AT1G12980 | 55.357 | 56 | 25 | 0 | 29 | 84 | 57 | 112 | 2.83e-11 | 61.6 |
MS.gene30844.t1 | AT2G44840 | 54.386 | 57 | 25 | 1 | 29 | 84 | 92 | 148 | 3.30e-11 | 60.5 |
MS.gene30844.t1 | AT5G25390 | 51.786 | 56 | 24 | 1 | 29 | 84 | 7 | 59 | 3.57e-11 | 59.7 |
MS.gene30844.t1 | AT5G07310 | 46.835 | 79 | 40 | 1 | 6 | 84 | 71 | 147 | 5.16e-11 | 60.5 |
MS.gene30844.t1 | AT2G40350 | 48.214 | 56 | 29 | 0 | 29 | 84 | 74 | 129 | 6.07e-11 | 58.9 |
MS.gene30844.t1 | AT2G40350 | 48.214 | 56 | 29 | 0 | 29 | 84 | 67 | 122 | 7.37e-11 | 58.5 |
Find 58 sgRNAs with CRISPR-Local
Find 61 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTAATATATACATATGTTT+AGG | 0.215595 | 6.2:+58773728 | None:intergenic |
GGAAGAGGAACTTAGATAAA+TGG | 0.256718 | 6.2:+58773839 | MS.gene30844:CDS |
ACGTTGCAGCGATGGCATTA+AGG | 0.265866 | 6.2:+58773947 | MS.gene30844:CDS |
TTTCTCCCTGCTGGTTTCTT+CGG | 0.268369 | 6.2:-58773775 | None:intergenic |
CTAATATATACATATGTTTA+GGG | 0.296079 | 6.2:+58773729 | None:intergenic |
TTCTCCCTGCTGGTTTCTTC+GGG | 0.296529 | 6.2:-58773774 | None:intergenic |
AGCAGGGAGAAAGAAGTTTA+AGG | 0.299906 | 6.2:+58773786 | MS.gene30844:CDS |
CAAATCCTAGTCTTCTTGTT+TGG | 0.307227 | 6.2:-58773880 | None:intergenic |
GCCAGAGTTGTGGAGGAATA+TGG | 0.338237 | 6.2:+58774212 | MS.gene30844:CDS |
TTAAACTTCTTTCTCCCTGC+TGG | 0.375374 | 6.2:-58773784 | None:intergenic |
CGTTGCAGCGATGGCATTAA+GGG | 0.377499 | 6.2:+58773948 | MS.gene30844:CDS |
TCGCTGCAACGTCGTGTGCT+CGG | 0.389912 | 6.2:-58773936 | None:intergenic |
CGCTGCAACGTCGTGTGCTC+GGG | 0.398592 | 6.2:-58773935 | None:intergenic |
AATGTCCCCTACACATAGTT+TGG | 0.427502 | 6.2:+58774239 | MS.gene30844:CDS |
CAAACAAGAAGACTAGGATT+TGG | 0.429238 | 6.2:+58773881 | MS.gene30844:CDS |
GAAGAGGAACTTAGATAAAT+GGG | 0.434368 | 6.2:+58773840 | MS.gene30844:CDS |
TGTATAGAGGTGTGAGGAAG+AGG | 0.474025 | 6.2:+58773824 | MS.gene30844:CDS |
GTAGTCGTTAATGTCTTGTC+TGG | 0.496095 | 6.2:-58774084 | None:intergenic |
ACTCGCCACCCGGTGTATAG+AGG | 0.496516 | 6.2:+58773811 | MS.gene30844:CDS |
GCCATATTCCTCCACAACTC+TGG | 0.506491 | 6.2:-58774213 | None:intergenic |
CTGAAACAAAAGACATTCAA+AGG | 0.509319 | 6.2:+58774031 | MS.gene30844:CDS |
CATGCACCAAACTATGTGTA+GGG | 0.511168 | 6.2:-58774245 | None:intergenic |
CGGGCAGCCATCTCAGCCGT+TGG | 0.512810 | 6.2:-58773916 | None:intergenic |
GGCAGCTGCAGAAGCCGCTG+AGG | 0.513356 | 6.2:+58774053 | MS.gene30844:CDS |
TGTGGAAGTCGAAGAAGAAG+AGG | 0.518171 | 6.2:+58774176 | MS.gene30844:CDS |
AGCACACGACGTTGCAGCGA+TGG | 0.528674 | 6.2:+58773939 | MS.gene30844:CDS |
TACTGACATTGACACGGTTG+TGG | 0.536605 | 6.2:+58774104 | MS.gene30844:CDS |
TGTCGTTGCAGTCGAAGAAG+AGG | 0.540894 | 6.2:+58774131 | MS.gene30844:CDS |
AGTTGCCCGAAGAAACCAGC+AGG | 0.545231 | 6.2:+58773769 | MS.gene30844:CDS |
CGAGTCTGCAAAATTGAGAC+AGG | 0.547018 | 6.2:-58773980 | None:intergenic |
AAGAAGACTAGGATTTGGCT+AGG | 0.552639 | 6.2:+58773886 | MS.gene30844:CDS |
TAAATGGGTGTGTGAAATGA+GGG | 0.554317 | 6.2:+58773855 | MS.gene30844:CDS |
TGTACAATTTCAAGATGAAG+AGG | 0.556998 | 6.2:+58774284 | MS.gene30844:CDS |
GTTTAAGGAGACTCGCCACC+CGG | 0.558195 | 6.2:+58773801 | MS.gene30844:CDS |
GTTTCAGCAGAGGCAGGAGT+AGG | 0.561690 | 6.2:-58774015 | None:intergenic |
GTTTAGGGAGGGGCAATTAG+CGG | 0.561963 | 6.2:+58773744 | MS.gene30844:CDS |
TATATACATATGTTTAGGGA+GGG | 0.562832 | 6.2:+58773733 | None:intergenic |
ATATACATATGTTTAGGGAG+GGG | 0.565127 | 6.2:+58773734 | None:intergenic |
TCATGCACCAAACTATGTGT+AGG | 0.576797 | 6.2:-58774246 | None:intergenic |
TTCCTCACACCTCTATACAC+CGG | 0.578151 | 6.2:-58773820 | None:intergenic |
TCCTCACACCTCTATACACC+GGG | 0.580421 | 6.2:-58773819 | None:intergenic |
GGGAACCAAACAAGAAGACT+AGG | 0.587015 | 6.2:+58773875 | MS.gene30844:CDS |
TGAAACAAAAGACATTCAAA+GGG | 0.589399 | 6.2:+58774032 | MS.gene30844:CDS |
ATAAATGGGTGTGTGAAATG+AGG | 0.599450 | 6.2:+58773854 | MS.gene30844:CDS |
TGTTGAATATGCCAGAGTTG+TGG | 0.615027 | 6.2:+58774202 | MS.gene30844:CDS |
AAGATGAAGAGGTATCGCTA+TGG | 0.623814 | 6.2:+58774295 | MS.gene30844:CDS |
ATATATACATATGTTTAGGG+AGG | 0.634372 | 6.2:+58773732 | None:intergenic |
GTTGCAGCGATGGCATTAAG+GGG | 0.638430 | 6.2:+58773949 | MS.gene30844:CDS |
AACGACTACTGACATTGACA+CGG | 0.655325 | 6.2:+58774098 | MS.gene30844:CDS |
AGAAGACTAGGATTTGGCTA+GGG | 0.661545 | 6.2:+58773887 | MS.gene30844:CDS |
TTCTTCGACTGCAACGACAA+CGG | 0.675808 | 6.2:-58774127 | None:intergenic |
GTCTGGTCTGAAAGCCTCAG+CGG | 0.676858 | 6.2:-58774067 | None:intergenic |
ATGCACCAAACTATGTGTAG+GGG | 0.684106 | 6.2:-58774244 | None:intergenic |
TGAATATGCCAGAGTTGTGG+AGG | 0.686416 | 6.2:+58774205 | MS.gene30844:CDS |
CAAAATTGAGACAGGCGTAG+CGG | 0.688544 | 6.2:-58773972 | None:intergenic |
ACCCGGTGTATAGAGGTGTG+AGG | 0.705873 | 6.2:+58773818 | MS.gene30844:CDS |
TCACACCTCTATACACCGGG+TGG | 0.726886 | 6.2:-58773816 | None:intergenic |
GTTGCCCGAAGAAACCAGCA+GGG | 0.737979 | 6.2:+58773770 | MS.gene30844:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TGAAACAAAAGACATTCAAA+GGG | + | chr6.2:58774032-58774051 | MS.gene30844:CDS | 25.0% |
CTGAAACAAAAGACATTCAA+AGG | + | chr6.2:58774031-58774050 | MS.gene30844:CDS | 30.0% | |
GAAGAGGAACTTAGATAAAT+GGG | + | chr6.2:58773840-58773859 | MS.gene30844:CDS | 30.0% | |
TGTACAATTTCAAGATGAAG+AGG | + | chr6.2:58774284-58774303 | MS.gene30844:CDS | 30.0% | |
ATAAATGGGTGTGTGAAATG+AGG | + | chr6.2:58773854-58773873 | MS.gene30844:CDS | 35.0% | |
CAAACAAGAAGACTAGGATT+TGG | + | chr6.2:58773881-58773900 | MS.gene30844:CDS | 35.0% | |
GGAAGAGGAACTTAGATAAA+TGG | + | chr6.2:58773839-58773858 | MS.gene30844:CDS | 35.0% | |
TAAATGGGTGTGTGAAATGA+GGG | + | chr6.2:58773855-58773874 | MS.gene30844:CDS | 35.0% | |
! | CAAATCCTAGTCTTCTTGTT+TGG | - | chr6.2:58773883-58773902 | None:intergenic | 35.0% |
!! | AATGTCTTTTGTTTCAGCAG+AGG | - | chr6.2:58774028-58774047 | None:intergenic | 35.0% |
!! | AGTGCTGAATATGTTTTGTG+TGG | + | chr6.2:58774158-58774177 | MS.gene30844:CDS | 35.0% |
AACGACTACTGACATTGACA+CGG | + | chr6.2:58774098-58774117 | MS.gene30844:CDS | 40.0% | |
AAGAAGACTAGGATTTGGCT+AGG | + | chr6.2:58773886-58773905 | MS.gene30844:CDS | 40.0% | |
AATGTCCCCTACACATAGTT+TGG | + | chr6.2:58774239-58774258 | MS.gene30844:CDS | 40.0% | |
AGAAGACTAGGATTTGGCTA+GGG | + | chr6.2:58773887-58773906 | MS.gene30844:CDS | 40.0% | |
AGCAGGGAGAAAGAAGTTTA+AGG | + | chr6.2:58773786-58773805 | MS.gene30844:CDS | 40.0% | |
ATGCACCAAACTATGTGTAG+GGG | - | chr6.2:58774247-58774266 | None:intergenic | 40.0% | |
CATGCACCAAACTATGTGTA+GGG | - | chr6.2:58774248-58774267 | None:intergenic | 40.0% | |
GTAGTCGTTAATGTCTTGTC+TGG | - | chr6.2:58774087-58774106 | None:intergenic | 40.0% | |
TCATGCACCAAACTATGTGT+AGG | - | chr6.2:58774249-58774268 | None:intergenic | 40.0% | |
TGTTGAATATGCCAGAGTTG+TGG | + | chr6.2:58774202-58774221 | MS.gene30844:CDS | 40.0% | |
TTAAACTTCTTTCTCCCTGC+TGG | - | chr6.2:58773787-58773806 | None:intergenic | 40.0% | |
! | CTGTCTCAATTTTGCAGACT+CGG | + | chr6.2:58773981-58774000 | MS.gene30844:CDS | 40.0% |
!! | AAGATGAAGAGGTATCGCTA+TGG | + | chr6.2:58774295-58774314 | MS.gene30844:CDS | 40.0% |
CAAAATTGAGACAGGCGTAG+CGG | - | chr6.2:58773975-58773994 | None:intergenic | 45.0% | |
CGAGTCTGCAAAATTGAGAC+AGG | - | chr6.2:58773983-58774002 | None:intergenic | 45.0% | |
GGGAACCAAACAAGAAGACT+AGG | + | chr6.2:58773875-58773894 | MS.gene30844:CDS | 45.0% | |
TACTGACATTGACACGGTTG+TGG | + | chr6.2:58774104-58774123 | MS.gene30844:CDS | 45.0% | |
TGAATATGCCAGAGTTGTGG+AGG | + | chr6.2:58774205-58774224 | MS.gene30844:CDS | 45.0% | |
TGTGGAAGTCGAAGAAGAAG+AGG | + | chr6.2:58774176-58774195 | MS.gene30844:CDS | 45.0% | |
TTCCTCACACCTCTATACAC+CGG | - | chr6.2:58773823-58773842 | None:intergenic | 45.0% | |
TTCTTCGACTGCAACGACAA+CGG | - | chr6.2:58774130-58774149 | None:intergenic | 45.0% | |
! | TGTATAGAGGTGTGAGGAAG+AGG | + | chr6.2:58773824-58773843 | MS.gene30844:CDS | 45.0% |
! | TTGGCTAGGGACTTTTCCAA+CGG | + | chr6.2:58773900-58773919 | MS.gene30844:CDS | 45.0% |
!! | TCTTTTGTTTCAGCAGAGGC+AGG | - | chr6.2:58774024-58774043 | None:intergenic | 45.0% |
!! | TTTCTCCCTGCTGGTTTCTT+CGG | - | chr6.2:58773778-58773797 | None:intergenic | 45.0% |
!!! | TCAATTTTGCAGACTCGGTG+TGG | + | chr6.2:58773986-58774005 | MS.gene30844:CDS | 45.0% |
ACGTTGCAGCGATGGCATTA+AGG | + | chr6.2:58773947-58773966 | MS.gene30844:CDS | 50.0% | |
CGTTGCAGCGATGGCATTAA+GGG | + | chr6.2:58773948-58773967 | MS.gene30844:CDS | 50.0% | |
GCCAGAGTTGTGGAGGAATA+TGG | + | chr6.2:58774212-58774231 | MS.gene30844:CDS | 50.0% | |
GCCATATTCCTCCACAACTC+TGG | - | chr6.2:58774216-58774235 | None:intergenic | 50.0% | |
GTTGCAGCGATGGCATTAAG+GGG | + | chr6.2:58773949-58773968 | MS.gene30844:CDS | 50.0% | |
GTTTAGGGAGGGGCAATTAG+CGG | + | chr6.2:58773744-58773763 | MS.gene30844:CDS | 50.0% | |
TCCTCACACCTCTATACACC+GGG | - | chr6.2:58773822-58773841 | None:intergenic | 50.0% | |
TGTCGTTGCAGTCGAAGAAG+AGG | + | chr6.2:58774131-58774150 | MS.gene30844:CDS | 50.0% | |
! | GACTTTTCCAACGGCTGAGA+TGG | + | chr6.2:58773909-58773928 | MS.gene30844:CDS | 50.0% |
!! | TTCTCCCTGCTGGTTTCTTC+GGG | - | chr6.2:58773777-58773796 | None:intergenic | 50.0% |
!!! | ATTTTGCAGACTCGGTGTGG+AGG | + | chr6.2:58773989-58774008 | MS.gene30844:CDS | 50.0% |
AGTTGCCCGAAGAAACCAGC+AGG | + | chr6.2:58773769-58773788 | MS.gene30844:CDS | 55.0% | |
GTCTGGTCTGAAAGCCTCAG+CGG | - | chr6.2:58774070-58774089 | None:intergenic | 55.0% | |
GTTGCCCGAAGAAACCAGCA+GGG | + | chr6.2:58773770-58773789 | MS.gene30844:CDS | 55.0% | |
GTTTAAGGAGACTCGCCACC+CGG | + | chr6.2:58773801-58773820 | MS.gene30844:CDS | 55.0% | |
GTTTCAGCAGAGGCAGGAGT+AGG | - | chr6.2:58774018-58774037 | None:intergenic | 55.0% | |
TCACACCTCTATACACCGGG+TGG | - | chr6.2:58773819-58773838 | None:intergenic | 55.0% | |
! | ACCCGGTGTATAGAGGTGTG+AGG | + | chr6.2:58773818-58773837 | MS.gene30844:CDS | 55.0% |
ACTCGCCACCCGGTGTATAG+AGG | + | chr6.2:58773811-58773830 | MS.gene30844:CDS | 60.0% | |
AGCACACGACGTTGCAGCGA+TGG | + | chr6.2:58773939-58773958 | MS.gene30844:CDS | 60.0% | |
TCGCTGCAACGTCGTGTGCT+CGG | - | chr6.2:58773939-58773958 | None:intergenic | 60.0% | |
CGCTGCAACGTCGTGTGCTC+GGG | - | chr6.2:58773938-58773957 | None:intergenic | 65.0% | |
CGGGCAGCCATCTCAGCCGT+TGG | - | chr6.2:58773919-58773938 | None:intergenic | 70.0% | |
GGCAGCTGCAGAAGCCGCTG+AGG | + | chr6.2:58774053-58774072 | MS.gene30844:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 58773742 | 58774326 | 58773742 | ID=MS.gene30844 |
chr6.2 | mRNA | 58773742 | 58774326 | 58773742 | ID=MS.gene30844.t1;Parent=MS.gene30844 |
chr6.2 | exon | 58773742 | 58774326 | 58773742 | ID=MS.gene30844.t1.exon1;Parent=MS.gene30844.t1 |
chr6.2 | CDS | 58773742 | 58774326 | 58773742 | ID=cds.MS.gene30844.t1;Parent=MS.gene30844.t1 |
Gene Sequence |
Protein sequence |