Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86599.t1 | AGR40688.1 | 83.7 | 208 | 26 | 1 | 1 | 200 | 1 | 208 | 1.40E-79 | 305.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86599.t1 | Q9SYS6 | 54.4 | 193 | 82 | 4 | 10 | 200 | 28 | 216 | 2.0e-45 | 183.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86599.t1 | S5MAB9 | 83.7 | 208 | 26 | 1 | 1 | 200 | 1 | 208 | 1.0e-79 | 305.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene86599.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86599.t1 | MTR_6g465530 | 90.500 | 200 | 17 | 2 | 1 | 200 | 1 | 198 | 6.35e-117 | 330 |
MS.gene86599.t1 | MTR_6g465510 | 86.603 | 209 | 18 | 2 | 1 | 200 | 1 | 208 | 3.90e-111 | 316 |
MS.gene86599.t1 | MTR_6g465420 | 76.166 | 193 | 39 | 3 | 3 | 194 | 24 | 210 | 8.91e-103 | 297 |
MS.gene86599.t1 | MTR_6g465460 | 77.368 | 190 | 33 | 3 | 7 | 194 | 28 | 209 | 1.35e-101 | 294 |
MS.gene86599.t1 | MTR_6g465450 | 78.462 | 195 | 34 | 3 | 2 | 194 | 23 | 211 | 3.08e-100 | 290 |
MS.gene86599.t1 | MTR_6g465430 | 76.804 | 194 | 36 | 3 | 3 | 194 | 24 | 210 | 8.88e-97 | 281 |
MS.gene86599.t1 | MTR_6g465690 | 74.468 | 188 | 40 | 2 | 5 | 191 | 35 | 215 | 1.67e-93 | 273 |
MS.gene86599.t1 | MTR_6g466000 | 68.966 | 203 | 50 | 2 | 6 | 200 | 30 | 227 | 1.95e-93 | 272 |
MS.gene86599.t1 | MTR_6g466130 | 71.500 | 200 | 51 | 3 | 1 | 200 | 35 | 228 | 2.54e-90 | 264 |
MS.gene86599.t1 | MTR_6g465850 | 54.694 | 245 | 62 | 2 | 5 | 200 | 35 | 279 | 9.85e-74 | 224 |
MS.gene86599.t1 | MTR_1g101600 | 59.204 | 201 | 66 | 4 | 4 | 200 | 12 | 200 | 4.01e-68 | 207 |
MS.gene86599.t1 | MTR_6g465990 | 58.128 | 203 | 52 | 3 | 6 | 200 | 16 | 193 | 1.47e-65 | 200 |
MS.gene86599.t1 | MTR_6g466020 | 57.143 | 189 | 52 | 3 | 10 | 197 | 20 | 180 | 1.13e-59 | 185 |
MS.gene86599.t1 | MTR_5g010930 | 47.619 | 210 | 78 | 7 | 11 | 200 | 27 | 224 | 2.82e-51 | 165 |
MS.gene86599.t1 | MTR_5g010940 | 46.154 | 208 | 96 | 5 | 4 | 200 | 25 | 227 | 9.00e-50 | 161 |
MS.gene86599.t1 | MTR_5g010910 | 47.449 | 196 | 87 | 5 | 16 | 200 | 32 | 222 | 1.15e-48 | 158 |
MS.gene86599.t1 | MTR_4g102660 | 51.643 | 213 | 80 | 9 | 3 | 200 | 14 | 218 | 2.25e-47 | 155 |
MS.gene86599.t1 | MTR_3g110205 | 56.436 | 101 | 43 | 1 | 23 | 122 | 32 | 132 | 2.77e-32 | 115 |
MS.gene86599.t1 | MTR_8g006410 | 65.000 | 80 | 28 | 0 | 28 | 107 | 47 | 126 | 5.14e-32 | 115 |
MS.gene86599.t1 | MTR_7g117690 | 60.227 | 88 | 35 | 0 | 20 | 107 | 15 | 102 | 3.02e-31 | 112 |
MS.gene86599.t1 | MTR_2g101340 | 55.446 | 101 | 39 | 2 | 13 | 107 | 15 | 115 | 1.36e-30 | 111 |
MS.gene86599.t1 | MTR_7g046260 | 58.511 | 94 | 32 | 1 | 21 | 107 | 42 | 135 | 1.55e-30 | 112 |
MS.gene86599.t1 | MTR_8g013860 | 54.639 | 97 | 43 | 1 | 12 | 107 | 25 | 121 | 2.81e-30 | 110 |
MS.gene86599.t1 | MTR_2g085015 | 39.759 | 166 | 80 | 5 | 27 | 174 | 41 | 204 | 4.77e-30 | 110 |
MS.gene86599.t1 | MTR_8g102800 | 56.566 | 99 | 43 | 0 | 23 | 121 | 27 | 125 | 8.73e-30 | 110 |
MS.gene86599.t1 | MTR_5g012910 | 62.025 | 79 | 30 | 0 | 29 | 107 | 24 | 102 | 2.04e-29 | 107 |
MS.gene86599.t1 | MTR_6g088405 | 62.821 | 78 | 29 | 0 | 30 | 107 | 41 | 118 | 5.01e-29 | 107 |
MS.gene86599.t1 | MTR_8g027465 | 56.383 | 94 | 38 | 1 | 17 | 107 | 23 | 116 | 1.19e-28 | 105 |
MS.gene86599.t1 | MTR_4g100650 | 60.256 | 78 | 31 | 0 | 30 | 107 | 71 | 148 | 1.88e-25 | 99.4 |
MS.gene86599.t1 | MTR_4g102670 | 55.696 | 79 | 34 | 1 | 29 | 107 | 11 | 88 | 7.33e-25 | 95.9 |
MS.gene86599.t1 | MTR_6g088425 | 61.628 | 86 | 33 | 0 | 29 | 114 | 45 | 130 | 4.00e-24 | 95.5 |
MS.gene86599.t1 | MTR_4g035430 | 50.000 | 92 | 46 | 0 | 23 | 114 | 22 | 113 | 7.89e-24 | 94.4 |
MS.gene86599.t1 | MTR_1g006660 | 57.609 | 92 | 35 | 1 | 20 | 107 | 30 | 121 | 3.89e-22 | 90.9 |
MS.gene86599.t1 | MTR_5g008590 | 36.932 | 176 | 102 | 3 | 33 | 199 | 11 | 186 | 4.41e-22 | 89.0 |
MS.gene86599.t1 | MTR_5g008550 | 35.915 | 142 | 86 | 2 | 33 | 169 | 21 | 162 | 4.22e-20 | 84.0 |
MS.gene86599.t1 | MTR_2g435590 | 52.000 | 75 | 33 | 1 | 17 | 91 | 83 | 154 | 5.82e-18 | 79.7 |
MS.gene86599.t1 | MTR_5g008470 | 45.238 | 84 | 46 | 0 | 35 | 118 | 77 | 160 | 1.21e-17 | 77.4 |
MS.gene86599.t1 | MTR_3g102100 | 52.113 | 71 | 33 | 1 | 18 | 88 | 31 | 100 | 1.27e-17 | 77.0 |
MS.gene86599.t1 | MTR_1g014780 | 56.667 | 60 | 26 | 0 | 32 | 91 | 37 | 96 | 1.48e-17 | 78.2 |
MS.gene86599.t1 | MTR_2g043030 | 27.778 | 198 | 121 | 4 | 22 | 200 | 8 | 202 | 4.05e-17 | 76.3 |
MS.gene86599.t1 | MTR_7g021010 | 53.623 | 69 | 31 | 1 | 25 | 92 | 3 | 71 | 4.28e-17 | 74.7 |
MS.gene86599.t1 | MTR_8g090350 | 44.086 | 93 | 47 | 2 | 17 | 104 | 95 | 187 | 5.18e-17 | 77.4 |
MS.gene86599.t1 | MTR_2g105380 | 52.941 | 68 | 32 | 0 | 21 | 88 | 105 | 172 | 6.40e-17 | 78.2 |
MS.gene86599.t1 | MTR_1g087920 | 46.739 | 92 | 47 | 1 | 11 | 100 | 53 | 144 | 7.16e-17 | 77.4 |
MS.gene86599.t1 | MTR_1g060910 | 35.838 | 173 | 71 | 8 | 17 | 174 | 3 | 150 | 7.25e-17 | 75.1 |
MS.gene86599.t1 | MTR_7g020980 | 48.101 | 79 | 39 | 1 | 14 | 92 | 34 | 110 | 8.94e-17 | 74.7 |
MS.gene86599.t1 | MTR_3g105510 | 44.706 | 85 | 47 | 0 | 33 | 117 | 37 | 121 | 9.27e-17 | 76.3 |
MS.gene86599.t1 | MTR_1g014820 | 42.391 | 92 | 49 | 1 | 32 | 119 | 26 | 117 | 9.80e-17 | 76.3 |
MS.gene86599.t1 | MTR_1g101550 | 42.254 | 142 | 76 | 4 | 33 | 170 | 57 | 196 | 1.39e-16 | 75.5 |
MS.gene86599.t1 | MTR_3g074130 | 52.564 | 78 | 34 | 2 | 14 | 90 | 132 | 207 | 1.60e-16 | 76.6 |
MS.gene86599.t1 | MTR_1g019110 | 37.374 | 99 | 59 | 1 | 33 | 131 | 44 | 139 | 1.76e-16 | 73.9 |
MS.gene86599.t1 | MTR_4g086220 | 62.500 | 56 | 21 | 0 | 33 | 88 | 96 | 151 | 1.99e-16 | 75.1 |
MS.gene86599.t1 | MTR_7g021010 | 43.373 | 83 | 47 | 0 | 29 | 111 | 47 | 129 | 2.44e-16 | 73.6 |
MS.gene86599.t1 | MTR_2g043050 | 45.882 | 85 | 46 | 0 | 32 | 116 | 18 | 102 | 2.56e-16 | 74.3 |
MS.gene86599.t1 | MTR_5g062700 | 59.322 | 59 | 24 | 0 | 32 | 90 | 172 | 230 | 2.74e-16 | 76.3 |
MS.gene86599.t1 | MTR_1g028560 | 59.649 | 57 | 23 | 0 | 33 | 89 | 115 | 171 | 3.59e-16 | 75.9 |
MS.gene86599.t1 | MTR_1g090170 | 55.556 | 63 | 28 | 0 | 28 | 90 | 147 | 209 | 3.67e-16 | 75.5 |
MS.gene86599.t1 | MTR_5g082950 | 64.286 | 56 | 20 | 0 | 33 | 88 | 66 | 121 | 3.98e-16 | 75.5 |
MS.gene86599.t1 | MTR_1g014860 | 51.562 | 64 | 31 | 0 | 28 | 91 | 17 | 80 | 4.25e-16 | 73.9 |
MS.gene86599.t1 | MTR_5g083340 | 60.345 | 58 | 23 | 0 | 33 | 90 | 85 | 142 | 4.63e-16 | 75.9 |
MS.gene86599.t1 | MTR_8g092460 | 56.667 | 60 | 26 | 0 | 33 | 92 | 145 | 204 | 4.72e-16 | 75.1 |
MS.gene86599.t1 | MTR_2g090235 | 59.322 | 59 | 24 | 0 | 32 | 90 | 217 | 275 | 5.03e-16 | 75.9 |
MS.gene86599.t1 | MTR_1g090170 | 55.556 | 63 | 28 | 0 | 28 | 90 | 234 | 296 | 5.95e-16 | 75.5 |
MS.gene86599.t1 | MTR_4g086160 | 60.714 | 56 | 22 | 0 | 33 | 88 | 96 | 151 | 8.08e-16 | 73.6 |
MS.gene86599.t1 | MTR_2g089170 | 36.154 | 130 | 67 | 4 | 33 | 158 | 65 | 182 | 8.87e-16 | 72.4 |
MS.gene86599.t1 | MTR_5g016750 | 57.143 | 56 | 24 | 0 | 33 | 88 | 25 | 80 | 9.23e-16 | 72.4 |
MS.gene86599.t1 | MTR_4g086190 | 60.714 | 56 | 22 | 0 | 33 | 88 | 96 | 151 | 1.11e-15 | 73.2 |
MS.gene86599.t1 | MTR_1g014800 | 53.333 | 60 | 28 | 0 | 32 | 91 | 30 | 89 | 1.46e-15 | 72.4 |
MS.gene86599.t1 | MTR_4g086165 | 60.714 | 56 | 22 | 0 | 33 | 88 | 82 | 137 | 1.66e-15 | 72.0 |
MS.gene86599.t1 | MTR_2g078680 | 60.714 | 56 | 22 | 0 | 33 | 88 | 31 | 86 | 1.90e-15 | 72.0 |
MS.gene86599.t1 | MTR_3g053690 | 58.333 | 60 | 25 | 0 | 29 | 88 | 23 | 82 | 2.17e-15 | 72.0 |
MS.gene86599.t1 | MTR_4g114570 | 52.113 | 71 | 27 | 1 | 33 | 103 | 7 | 70 | 2.26e-15 | 72.0 |
MS.gene86599.t1 | MTR_7g092190 | 62.500 | 56 | 21 | 0 | 33 | 88 | 30 | 85 | 2.86e-15 | 72.8 |
MS.gene86599.t1 | MTR_3g105480 | 44.578 | 83 | 46 | 0 | 35 | 117 | 33 | 115 | 3.52e-15 | 71.6 |
MS.gene86599.t1 | MTR_5g083330 | 52.055 | 73 | 35 | 0 | 18 | 90 | 20 | 92 | 4.64e-15 | 72.4 |
MS.gene86599.t1 | MTR_1g074310 | 54.839 | 62 | 27 | 1 | 33 | 93 | 21 | 82 | 5.80e-15 | 69.3 |
MS.gene86599.t1 | MTR_5g009620 | 44.565 | 92 | 45 | 1 | 3 | 88 | 76 | 167 | 5.91e-15 | 72.0 |
MS.gene86599.t1 | MTR_4g078710 | 36.893 | 103 | 59 | 1 | 33 | 135 | 28 | 124 | 6.14e-15 | 70.9 |
MS.gene86599.t1 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 23 | 88 | 113 | 178 | 7.15e-15 | 72.4 |
MS.gene86599.t1 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 23 | 88 | 114 | 179 | 7.38e-15 | 72.4 |
MS.gene86599.t1 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 23 | 88 | 114 | 179 | 7.38e-15 | 72.4 |
MS.gene86599.t1 | MTR_2g438180 | 58.065 | 62 | 25 | 1 | 33 | 93 | 14 | 75 | 7.56e-15 | 68.6 |
MS.gene86599.t1 | MTR_7g028925 | 55.000 | 60 | 24 | 1 | 32 | 91 | 28 | 84 | 8.64e-15 | 67.4 |
MS.gene86599.t1 | MTR_0939s0010 | 58.929 | 56 | 23 | 0 | 33 | 88 | 65 | 120 | 9.69e-15 | 69.7 |
MS.gene86599.t1 | MTR_2g015050 | 52.174 | 69 | 32 | 1 | 21 | 88 | 122 | 190 | 1.47e-14 | 70.5 |
MS.gene86599.t1 | MTR_4g010640 | 58.929 | 56 | 23 | 0 | 33 | 88 | 7 | 62 | 1.83e-14 | 69.3 |
MS.gene86599.t1 | MTR_2g103700 | 55.000 | 60 | 27 | 0 | 33 | 92 | 7 | 66 | 3.00e-14 | 68.2 |
MS.gene86599.t1 | MTR_3g072610 | 43.810 | 105 | 53 | 3 | 17 | 117 | 11 | 113 | 3.06e-14 | 68.9 |
MS.gene86599.t1 | MTR_2g014340 | 50.704 | 71 | 32 | 1 | 18 | 88 | 7 | 74 | 3.77e-14 | 68.2 |
MS.gene86599.t1 | MTR_3g090760 | 32.237 | 152 | 91 | 2 | 17 | 158 | 89 | 238 | 5.01e-14 | 69.7 |
MS.gene86599.t1 | MTR_1g048610 | 56.140 | 57 | 24 | 1 | 33 | 88 | 89 | 145 | 6.39e-14 | 68.2 |
MS.gene86599.t1 | MTR_4g054740 | 43.023 | 86 | 43 | 2 | 8 | 92 | 77 | 157 | 7.54e-14 | 68.2 |
MS.gene86599.t1 | MTR_3g106290 | 60.714 | 56 | 22 | 0 | 33 | 88 | 8 | 63 | 7.74e-14 | 67.4 |
MS.gene86599.t1 | MTR_1g070070 | 56.140 | 57 | 24 | 1 | 33 | 88 | 21 | 77 | 1.10e-13 | 65.9 |
MS.gene86599.t1 | MTR_4g100420 | 51.471 | 68 | 30 | 2 | 22 | 88 | 148 | 213 | 1.14e-13 | 68.6 |
MS.gene86599.t1 | MTR_2g043020 | 28.947 | 190 | 110 | 5 | 32 | 200 | 18 | 203 | 1.36e-13 | 67.0 |
MS.gene86599.t1 | MTR_4g008860 | 60.714 | 56 | 22 | 0 | 33 | 88 | 8 | 63 | 1.61e-13 | 66.6 |
MS.gene86599.t1 | MTR_4g054360 | 45.122 | 82 | 39 | 2 | 12 | 92 | 108 | 184 | 1.85e-13 | 67.4 |
MS.gene86599.t1 | MTR_5g085100 | 47.674 | 86 | 35 | 2 | 13 | 98 | 29 | 104 | 1.86e-13 | 67.8 |
MS.gene86599.t1 | MTR_2g014300 | 58.929 | 56 | 23 | 0 | 33 | 88 | 15 | 70 | 1.97e-13 | 65.9 |
MS.gene86599.t1 | MTR_1g074230 | 57.895 | 57 | 23 | 1 | 33 | 88 | 19 | 75 | 2.38e-13 | 64.7 |
MS.gene86599.t1 | MTR_2g016730 | 42.857 | 91 | 46 | 2 | 22 | 111 | 11 | 96 | 2.44e-13 | 67.8 |
MS.gene86599.t1 | MTR_4g100450 | 48.649 | 74 | 37 | 1 | 16 | 88 | 137 | 210 | 2.49e-13 | 67.4 |
MS.gene86599.t1 | MTR_5g085070 | 51.351 | 74 | 26 | 2 | 25 | 98 | 46 | 109 | 2.96e-13 | 67.0 |
MS.gene86599.t1 | MTR_2g043040 | 41.176 | 85 | 50 | 0 | 32 | 116 | 18 | 102 | 3.29e-13 | 66.2 |
MS.gene86599.t1 | MTR_5g075570 | 43.836 | 73 | 39 | 1 | 16 | 88 | 109 | 179 | 5.88e-13 | 66.2 |
MS.gene86599.t1 | MTR_8g099215 | 48.148 | 81 | 33 | 2 | 17 | 88 | 82 | 162 | 1.55e-12 | 65.5 |
MS.gene86599.t1 | MTR_5g008540 | 47.541 | 61 | 32 | 0 | 35 | 95 | 26 | 86 | 1.65e-12 | 61.6 |
MS.gene86599.t1 | MTR_4g088005 | 47.826 | 69 | 35 | 1 | 21 | 88 | 45 | 113 | 1.94e-12 | 62.0 |
MS.gene86599.t1 | MTR_4g054860 | 45.783 | 83 | 39 | 3 | 11 | 92 | 114 | 191 | 2.33e-12 | 64.3 |
MS.gene86599.t1 | MTR_8g069360 | 53.571 | 56 | 26 | 0 | 33 | 88 | 44 | 99 | 2.37e-12 | 65.1 |
MS.gene86599.t1 | MTR_1g090290 | 51.613 | 62 | 27 | 2 | 28 | 88 | 110 | 169 | 2.82e-12 | 63.2 |
MS.gene86599.t1 | MTR_1g074250 | 49.206 | 63 | 30 | 1 | 30 | 90 | 16 | 78 | 2.97e-12 | 61.6 |
MS.gene86599.t1 | MTR_4g111915 | 47.458 | 59 | 31 | 0 | 33 | 91 | 53 | 111 | 4.67e-12 | 61.2 |
MS.gene86599.t1 | MTR_6g029180 | 46.667 | 75 | 39 | 1 | 18 | 92 | 19 | 92 | 7.13e-12 | 63.5 |
MS.gene86599.t1 | MTR_7g081815 | 52.632 | 57 | 26 | 1 | 33 | 88 | 61 | 117 | 1.13e-11 | 61.6 |
MS.gene86599.t1 | MTR_8g006840 | 52.632 | 57 | 26 | 1 | 33 | 88 | 125 | 181 | 1.18e-11 | 61.6 |
MS.gene86599.t1 | MTR_7g081805 | 52.632 | 57 | 26 | 1 | 33 | 88 | 61 | 117 | 1.22e-11 | 61.6 |
MS.gene86599.t1 | MTR_6g041970 | 39.535 | 86 | 39 | 1 | 33 | 118 | 18 | 90 | 1.36e-11 | 58.9 |
MS.gene86599.t1 | MTR_4g100380 | 56.140 | 57 | 24 | 1 | 33 | 88 | 145 | 201 | 1.45e-11 | 62.0 |
MS.gene86599.t1 | MTR_5g008790 | 50.000 | 60 | 28 | 1 | 33 | 90 | 18 | 77 | 1.58e-11 | 60.5 |
MS.gene86599.t1 | MTR_4g112490 | 47.458 | 59 | 31 | 0 | 33 | 91 | 53 | 111 | 1.60e-11 | 61.2 |
MS.gene86599.t1 | MTR_8g085960 | 34.234 | 111 | 68 | 4 | 21 | 128 | 14 | 122 | 1.68e-11 | 61.6 |
MS.gene86599.t1 | MTR_2g015040 | 52.632 | 57 | 26 | 1 | 33 | 88 | 63 | 119 | 1.91e-11 | 60.1 |
MS.gene86599.t1 | MTR_7g096750 | 49.296 | 71 | 32 | 2 | 22 | 88 | 6 | 76 | 2.34e-11 | 59.3 |
MS.gene86599.t1 | MTR_8g006815 | 52.632 | 57 | 26 | 1 | 33 | 88 | 96 | 152 | 2.54e-11 | 60.5 |
MS.gene86599.t1 | MTR_7g085810 | 50.000 | 60 | 30 | 0 | 33 | 92 | 30 | 89 | 2.57e-11 | 61.2 |
MS.gene86599.t1 | MTR_5g032820 | 55.357 | 56 | 25 | 0 | 33 | 88 | 46 | 101 | 2.64e-11 | 62.0 |
MS.gene86599.t1 | MTR_7g011630 | 45.833 | 72 | 36 | 1 | 17 | 88 | 29 | 97 | 2.95e-11 | 62.0 |
MS.gene86599.t1 | MTR_8g023700 | 29.560 | 159 | 86 | 2 | 32 | 164 | 116 | 274 | 2.97e-11 | 62.0 |
MS.gene86599.t1 | MTR_8g032610 | 42.105 | 76 | 41 | 1 | 17 | 89 | 8 | 83 | 3.47e-11 | 61.2 |
MS.gene86599.t1 | MTR_4g119270 | 42.466 | 73 | 40 | 1 | 18 | 88 | 36 | 108 | 3.90e-11 | 61.2 |
MS.gene86599.t1 | MTR_3g095190 | 54.795 | 73 | 32 | 1 | 33 | 104 | 170 | 242 | 5.60e-11 | 60.8 |
MS.gene86599.t1 | MTR_6g012970 | 51.786 | 56 | 27 | 0 | 33 | 88 | 38 | 93 | 5.87e-11 | 61.2 |
MS.gene86599.t1 | MTR_7g081795 | 50.877 | 57 | 27 | 1 | 33 | 88 | 60 | 116 | 8.30e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86599.t1 | AT4G25470 | 55.779 | 199 | 70 | 5 | 10 | 200 | 28 | 216 | 1.98e-68 | 208 |
MS.gene86599.t1 | AT4G25480 | 55.779 | 199 | 68 | 4 | 11 | 200 | 29 | 216 | 1.53e-62 | 193 |
MS.gene86599.t1 | AT4G25490 | 56.000 | 200 | 66 | 5 | 11 | 200 | 26 | 213 | 3.62e-61 | 190 |
MS.gene86599.t1 | AT5G51990 | 51.000 | 200 | 81 | 4 | 10 | 200 | 31 | 222 | 3.10e-60 | 188 |
MS.gene86599.t1 | AT1G12610 | 47.343 | 207 | 97 | 4 | 5 | 200 | 2 | 207 | 1.60e-53 | 170 |
MS.gene86599.t1 | AT1G63030 | 45.918 | 196 | 88 | 3 | 6 | 200 | 3 | 181 | 5.53e-53 | 168 |
MS.gene86599.t1 | AT1G63030 | 45.918 | 196 | 88 | 3 | 6 | 200 | 3 | 181 | 5.53e-53 | 168 |
MS.gene86599.t1 | AT5G25810 | 58.511 | 94 | 38 | 1 | 22 | 114 | 24 | 117 | 1.00e-32 | 117 |
MS.gene86599.t1 | AT2G35700 | 63.750 | 80 | 29 | 0 | 28 | 107 | 40 | 119 | 3.09e-31 | 112 |
MS.gene86599.t1 | AT4G16750 | 50.000 | 110 | 50 | 1 | 3 | 107 | 5 | 114 | 1.34e-30 | 110 |
MS.gene86599.t1 | AT2G44940 | 39.080 | 174 | 75 | 3 | 22 | 168 | 89 | 258 | 1.73e-30 | 113 |
MS.gene86599.t1 | AT5G11590 | 58.333 | 96 | 36 | 1 | 23 | 114 | 37 | 132 | 2.22e-30 | 112 |
MS.gene86599.t1 | AT4G32800 | 50.467 | 107 | 47 | 1 | 20 | 120 | 6 | 112 | 1.39e-29 | 109 |
MS.gene86599.t1 | AT2G36450 | 41.711 | 187 | 96 | 5 | 21 | 200 | 3 | 183 | 1.43e-29 | 108 |
MS.gene86599.t1 | AT3G16280 | 42.391 | 184 | 82 | 5 | 29 | 200 | 57 | 228 | 2.83e-29 | 108 |
MS.gene86599.t1 | AT3G16280 | 42.391 | 184 | 82 | 5 | 29 | 200 | 75 | 246 | 3.01e-29 | 109 |
MS.gene86599.t1 | AT1G01250 | 52.830 | 106 | 47 | 1 | 5 | 107 | 14 | 119 | 1.68e-28 | 105 |
MS.gene86599.t1 | AT3G60490 | 57.317 | 82 | 34 | 1 | 27 | 107 | 64 | 145 | 3.96e-25 | 98.6 |
MS.gene86599.t1 | AT2G25820 | 60.526 | 76 | 30 | 0 | 32 | 107 | 25 | 100 | 5.63e-25 | 97.4 |
MS.gene86599.t1 | AT5G52020 | 43.017 | 179 | 87 | 6 | 29 | 200 | 61 | 231 | 1.62e-24 | 96.7 |
MS.gene86599.t1 | AT1G71450 | 36.095 | 169 | 98 | 3 | 32 | 199 | 23 | 182 | 1.10e-23 | 93.2 |
MS.gene86599.t1 | AT2G47520 | 46.512 | 86 | 43 | 1 | 9 | 91 | 23 | 108 | 2.54e-20 | 84.0 |
MS.gene86599.t1 | AT1G21910 | 48.913 | 92 | 40 | 1 | 33 | 117 | 50 | 141 | 3.24e-20 | 85.1 |
MS.gene86599.t1 | AT1G33760 | 53.933 | 89 | 41 | 0 | 33 | 121 | 20 | 108 | 3.45e-20 | 84.0 |
MS.gene86599.t1 | AT1G77200 | 58.442 | 77 | 32 | 0 | 31 | 107 | 41 | 117 | 9.58e-20 | 84.3 |
MS.gene86599.t1 | AT1G46768 | 58.730 | 63 | 25 | 1 | 28 | 90 | 27 | 88 | 6.63e-19 | 79.3 |
MS.gene86599.t1 | AT1G46768 | 58.730 | 63 | 25 | 1 | 28 | 90 | 27 | 88 | 7.16e-19 | 79.7 |
MS.gene86599.t1 | AT1G46768 | 58.730 | 63 | 25 | 1 | 28 | 90 | 27 | 88 | 7.16e-19 | 79.7 |
MS.gene86599.t1 | AT4G13620 | 55.714 | 70 | 29 | 1 | 23 | 90 | 220 | 289 | 9.85e-19 | 83.2 |
MS.gene86599.t1 | AT1G22190 | 54.795 | 73 | 31 | 1 | 18 | 90 | 70 | 140 | 5.90e-18 | 79.7 |
MS.gene86599.t1 | AT4G39780 | 50.000 | 78 | 37 | 1 | 11 | 88 | 73 | 148 | 6.39e-18 | 79.7 |
MS.gene86599.t1 | AT3G16770 | 55.556 | 72 | 28 | 1 | 19 | 90 | 69 | 136 | 7.04e-18 | 79.3 |
MS.gene86599.t1 | AT2G22200 | 50.667 | 75 | 35 | 1 | 32 | 104 | 70 | 144 | 8.02e-18 | 79.3 |
MS.gene86599.t1 | AT4G06746 | 44.828 | 87 | 43 | 1 | 8 | 94 | 16 | 97 | 8.36e-18 | 77.0 |
MS.gene86599.t1 | AT5G65130 | 53.247 | 77 | 34 | 1 | 18 | 92 | 96 | 172 | 1.77e-17 | 78.6 |
MS.gene86599.t1 | AT3G50260 | 39.286 | 112 | 56 | 3 | 25 | 136 | 13 | 112 | 1.90e-17 | 75.9 |
MS.gene86599.t1 | AT5G65130 | 53.247 | 77 | 34 | 1 | 18 | 92 | 94 | 170 | 1.91e-17 | 78.6 |
MS.gene86599.t1 | AT1G12630 | 39.227 | 181 | 98 | 4 | 29 | 200 | 15 | 192 | 2.03e-17 | 77.0 |
MS.gene86599.t1 | AT1G74930 | 41.667 | 96 | 56 | 0 | 23 | 118 | 11 | 106 | 2.45e-17 | 76.6 |
MS.gene86599.t1 | AT5G21960 | 47.619 | 84 | 44 | 0 | 31 | 114 | 5 | 88 | 2.84e-17 | 77.0 |
MS.gene86599.t1 | AT2G23340 | 46.591 | 88 | 41 | 1 | 33 | 114 | 28 | 115 | 3.46e-17 | 75.9 |
MS.gene86599.t1 | AT4G36900 | 56.667 | 60 | 26 | 0 | 29 | 88 | 26 | 85 | 5.40e-17 | 75.9 |
MS.gene86599.t1 | AT5G67190 | 57.143 | 56 | 24 | 0 | 33 | 88 | 21 | 76 | 1.54e-16 | 74.3 |
MS.gene86599.t1 | AT2G33710 | 49.367 | 79 | 35 | 1 | 28 | 101 | 65 | 143 | 1.56e-16 | 75.1 |
MS.gene86599.t1 | AT2G33710 | 49.367 | 79 | 35 | 1 | 28 | 101 | 65 | 143 | 1.79e-16 | 75.1 |
MS.gene86599.t1 | AT1G78080 | 59.322 | 59 | 24 | 0 | 32 | 90 | 151 | 209 | 1.88e-16 | 76.6 |
MS.gene86599.t1 | AT3G11020 | 56.061 | 66 | 29 | 0 | 27 | 92 | 72 | 137 | 6.83e-16 | 75.1 |
MS.gene86599.t1 | AT4G28140 | 55.932 | 59 | 26 | 0 | 32 | 90 | 142 | 200 | 7.14e-16 | 74.3 |
MS.gene86599.t1 | AT1G19210 | 36.522 | 115 | 73 | 0 | 33 | 147 | 12 | 126 | 7.42e-16 | 72.8 |
MS.gene86599.t1 | AT1G36060 | 61.404 | 57 | 22 | 0 | 32 | 88 | 142 | 198 | 8.05e-16 | 74.7 |
MS.gene86599.t1 | AT3G57600 | 52.778 | 72 | 34 | 0 | 17 | 88 | 12 | 83 | 1.08e-15 | 73.9 |
MS.gene86599.t1 | AT2G20880 | 39.450 | 109 | 61 | 1 | 32 | 140 | 186 | 289 | 1.11e-15 | 74.3 |
MS.gene86599.t1 | AT4G27950 | 59.649 | 57 | 23 | 0 | 33 | 89 | 118 | 174 | 1.62e-15 | 73.9 |
MS.gene86599.t1 | AT5G13330 | 54.688 | 64 | 27 | 1 | 29 | 92 | 37 | 98 | 1.92e-15 | 72.0 |
MS.gene86599.t1 | AT3G15210 | 60.714 | 56 | 22 | 0 | 33 | 88 | 25 | 80 | 2.35e-15 | 72.0 |
MS.gene86599.t1 | AT1G03800 | 52.941 | 68 | 29 | 1 | 21 | 88 | 44 | 108 | 3.35e-15 | 72.0 |
MS.gene86599.t1 | AT5G61890 | 54.688 | 64 | 27 | 1 | 29 | 92 | 88 | 149 | 3.52e-15 | 72.0 |
MS.gene86599.t1 | AT5G61600 | 60.656 | 61 | 21 | 2 | 29 | 88 | 86 | 144 | 5.91e-15 | 71.2 |
MS.gene86599.t1 | AT5G64750 | 35.652 | 115 | 65 | 3 | 43 | 154 | 195 | 303 | 8.28e-15 | 72.4 |
MS.gene86599.t1 | AT5G47230 | 52.778 | 72 | 33 | 1 | 18 | 88 | 141 | 212 | 8.39e-15 | 71.6 |
MS.gene86599.t1 | AT1G71520 | 33.803 | 142 | 71 | 5 | 27 | 162 | 8 | 132 | 9.04e-15 | 68.6 |
MS.gene86599.t1 | AT5G07580 | 49.367 | 79 | 37 | 2 | 27 | 104 | 106 | 182 | 9.10e-15 | 70.1 |
MS.gene86599.t1 | AT5G44210 | 58.929 | 56 | 23 | 0 | 33 | 88 | 33 | 88 | 1.00e-14 | 69.7 |
MS.gene86599.t1 | AT3G61630 | 48.101 | 79 | 35 | 1 | 33 | 111 | 105 | 177 | 1.07e-14 | 71.6 |
MS.gene86599.t1 | AT1G15360 | 58.929 | 56 | 23 | 0 | 33 | 88 | 7 | 62 | 1.18e-14 | 69.7 |
MS.gene86599.t1 | AT1G15360 | 58.929 | 56 | 23 | 0 | 33 | 88 | 7 | 62 | 1.18e-14 | 69.7 |
MS.gene86599.t1 | AT1G22810 | 39.785 | 93 | 41 | 2 | 33 | 117 | 14 | 99 | 1.39e-14 | 68.2 |
MS.gene86599.t1 | AT4G11140 | 57.143 | 56 | 24 | 0 | 33 | 88 | 87 | 142 | 1.43e-14 | 70.9 |
MS.gene86599.t1 | AT5G05410 | 57.627 | 59 | 25 | 0 | 33 | 91 | 79 | 137 | 1.43e-14 | 70.9 |
MS.gene86599.t1 | AT1G75490 | 48.611 | 72 | 37 | 0 | 32 | 103 | 41 | 112 | 1.51e-14 | 69.7 |
MS.gene86599.t1 | AT1G43160 | 37.405 | 131 | 70 | 3 | 33 | 163 | 61 | 179 | 1.56e-14 | 69.3 |
MS.gene86599.t1 | AT5G51190 | 57.143 | 63 | 24 | 2 | 27 | 88 | 68 | 128 | 1.78e-14 | 69.7 |
MS.gene86599.t1 | AT5G05410 | 57.627 | 59 | 25 | 0 | 33 | 91 | 79 | 137 | 1.94e-14 | 70.9 |
MS.gene86599.t1 | AT4G31060 | 42.683 | 82 | 43 | 1 | 11 | 88 | 1 | 82 | 2.44e-14 | 68.6 |
MS.gene86599.t1 | AT1G72360 | 44.737 | 76 | 42 | 0 | 13 | 88 | 54 | 129 | 3.31e-14 | 69.3 |
MS.gene86599.t1 | AT1G72360 | 49.206 | 63 | 32 | 0 | 26 | 88 | 18 | 80 | 3.36e-14 | 68.6 |
MS.gene86599.t1 | AT5G25390 | 55.357 | 56 | 25 | 0 | 33 | 88 | 7 | 62 | 4.37e-14 | 67.8 |
MS.gene86599.t1 | AT5G43410 | 55.000 | 60 | 26 | 1 | 30 | 88 | 12 | 71 | 4.84e-14 | 66.6 |
MS.gene86599.t1 | AT5G53290 | 42.045 | 88 | 50 | 1 | 2 | 89 | 95 | 181 | 8.18e-14 | 69.3 |
MS.gene86599.t1 | AT1G72360 | 49.206 | 63 | 32 | 0 | 26 | 88 | 69 | 131 | 9.32e-14 | 68.2 |
MS.gene86599.t1 | AT3G23230 | 51.613 | 62 | 29 | 1 | 33 | 93 | 20 | 81 | 9.47e-14 | 65.9 |
MS.gene86599.t1 | AT1G28370 | 57.143 | 56 | 24 | 0 | 33 | 88 | 20 | 75 | 1.15e-13 | 66.2 |
MS.gene86599.t1 | AT2G46310 | 55.357 | 56 | 25 | 0 | 33 | 88 | 99 | 154 | 1.52e-13 | 68.2 |
MS.gene86599.t1 | AT5G18450 | 47.500 | 80 | 38 | 1 | 9 | 88 | 14 | 89 | 1.61e-13 | 68.2 |
MS.gene86599.t1 | AT1G28370 | 57.143 | 56 | 24 | 0 | 33 | 88 | 58 | 113 | 1.88e-13 | 66.6 |
MS.gene86599.t1 | AT3G20310 | 53.226 | 62 | 29 | 0 | 27 | 88 | 21 | 82 | 2.47e-13 | 67.0 |
MS.gene86599.t1 | AT4G23750 | 54.386 | 57 | 26 | 0 | 33 | 89 | 122 | 178 | 3.80e-13 | 67.4 |
MS.gene86599.t1 | AT4G23750 | 54.386 | 57 | 26 | 0 | 33 | 89 | 122 | 178 | 3.80e-13 | 67.4 |
MS.gene86599.t1 | AT5G25190 | 58.929 | 56 | 23 | 0 | 33 | 88 | 8 | 63 | 5.94e-13 | 64.7 |
MS.gene86599.t1 | AT1G28360 | 55.000 | 60 | 27 | 0 | 33 | 92 | 12 | 71 | 6.08e-13 | 64.7 |
MS.gene86599.t1 | AT4G17490 | 55.556 | 63 | 25 | 2 | 27 | 88 | 133 | 193 | 6.95e-13 | 66.2 |
MS.gene86599.t1 | AT1G77640 | 45.556 | 90 | 43 | 1 | 33 | 116 | 43 | 132 | 9.71e-13 | 65.1 |
MS.gene86599.t1 | AT1G50640 | 48.193 | 83 | 39 | 2 | 7 | 88 | 4 | 83 | 1.07e-12 | 64.7 |
MS.gene86599.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 14 | 69 | 1.53e-12 | 65.1 |
MS.gene86599.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 14 | 69 | 1.53e-12 | 65.1 |
MS.gene86599.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 14 | 69 | 1.53e-12 | 65.1 |
MS.gene86599.t1 | AT1G12890 | 46.154 | 78 | 39 | 1 | 11 | 88 | 2 | 76 | 1.60e-12 | 64.3 |
MS.gene86599.t1 | AT5G19790 | 53.448 | 58 | 27 | 0 | 33 | 90 | 22 | 79 | 1.91e-12 | 64.7 |
MS.gene86599.t1 | AT5G47220 | 56.140 | 57 | 24 | 1 | 33 | 88 | 117 | 173 | 2.02e-12 | 64.3 |
MS.gene86599.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 72 | 127 | 2.37e-12 | 64.7 |
MS.gene86599.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 72 | 127 | 2.67e-12 | 64.7 |
MS.gene86599.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 79 | 134 | 3.16e-12 | 64.7 |
MS.gene86599.t1 | AT5G07310 | 50.685 | 73 | 34 | 1 | 16 | 88 | 77 | 147 | 6.38e-12 | 63.2 |
MS.gene86599.t1 | AT2G40220 | 64.912 | 57 | 20 | 0 | 33 | 89 | 55 | 111 | 8.89e-12 | 63.2 |
MS.gene86599.t1 | AT4G17500 | 56.140 | 57 | 24 | 1 | 33 | 88 | 148 | 204 | 1.34e-11 | 62.4 |
MS.gene86599.t1 | AT3G23240 | 50.000 | 58 | 28 | 1 | 33 | 89 | 82 | 139 | 1.67e-11 | 61.6 |
MS.gene86599.t1 | AT2G44840 | 54.386 | 57 | 25 | 1 | 33 | 88 | 92 | 148 | 1.75e-11 | 61.6 |
MS.gene86599.t1 | AT5G25390 | 51.786 | 56 | 24 | 1 | 33 | 88 | 7 | 59 | 1.85e-11 | 60.8 |
MS.gene86599.t1 | AT1G12980 | 55.357 | 56 | 25 | 0 | 33 | 88 | 57 | 112 | 3.81e-11 | 61.6 |
MS.gene86599.t1 | AT5G61590 | 58.209 | 67 | 25 | 2 | 23 | 88 | 99 | 163 | 3.82e-11 | 60.1 |
MS.gene86599.t1 | AT1G24590 | 51.562 | 64 | 28 | 1 | 33 | 96 | 58 | 118 | 4.18e-11 | 61.2 |
MS.gene86599.t1 | AT2G40350 | 48.214 | 56 | 29 | 0 | 33 | 88 | 74 | 129 | 5.64e-11 | 58.9 |
MS.gene86599.t1 | AT2G40350 | 48.214 | 56 | 29 | 0 | 33 | 88 | 67 | 122 | 6.44e-11 | 58.9 |
Find 59 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAAGAGGAACTTAGATAAA+TGG | 0.259157 | 6.1:+50905482 | MS.gene86599:CDS |
CAAATCCTAGTCTTCTTATT+CGG | 0.304564 | 6.1:-50905523 | None:intergenic |
GCCAGAGTTGTGGAGGAATA+TGG | 0.338237 | 6.1:+50905858 | MS.gene86599:CDS |
TTAAGCTTCTTCCTCCCTGC+TGG | 0.397058 | 6.1:-50905427 | None:intergenic |
CGAATAAGAAGACTAGGATT+TGG | 0.406523 | 6.1:+50905524 | MS.gene86599:CDS |
GCCTCAGCGGTGGCAGGAAT+AGG | 0.415517 | 6.1:-50905658 | None:intergenic |
GAAGAGGAACTTAGATAAAT+GGG | 0.423648 | 6.1:+50905483 | MS.gene86599:CDS |
GTGTGCACGGGCAGCCATCT+CGG | 0.428196 | 6.1:-50905566 | None:intergenic |
CGTTGCAGCAATTGCATTGA+GGG | 0.436008 | 6.1:+50905591 | MS.gene86599:CDS |
CTGTCTCAACTTTGCAGACT+CGG | 0.436160 | 6.1:+50905624 | MS.gene86599:CDS |
TTAGTCATTAAAGTCTTGTC+TGG | 0.441603 | 6.1:-50905727 | None:intergenic |
AATGTCCCCTACACATAGTA+TGG | 0.442156 | 6.1:+50905885 | MS.gene86599:CDS |
GGCAGCTGCAGAAGCTGCCG+AGG | 0.451466 | 6.1:+50905696 | MS.gene86599:CDS |
ATATGTTTACAAGTAACAAC+GGG | 0.454775 | 6.1:+50905371 | None:intergenic |
TTGCTGCAACGTCGTGTGCA+CGG | 0.466937 | 6.1:-50905579 | None:intergenic |
TGCTGCAACGTCGTGTGCAC+GGG | 0.472831 | 6.1:-50905578 | None:intergenic |
TGTATAGAGGTGTGAGGAAG+AGG | 0.474025 | 6.1:+50905467 | MS.gene86599:CDS |
AGTACAAGACTTTCAATATG+AGG | 0.490333 | 6.1:+50905930 | MS.gene86599:CDS |
CATGCTCCATACTATGTGTA+GGG | 0.491173 | 6.1:-50905891 | None:intergenic |
ACTCGCCACCCGGTGTATAG+AGG | 0.496516 | 6.1:+50905454 | MS.gene86599:CDS |
CTGAGGCAAAAGACATTCAA+AGG | 0.499259 | 6.1:+50905674 | MS.gene86599:CDS |
TGAAGTCGAAGAAGAAGAAG+AGG | 0.500617 | 6.1:+50905822 | MS.gene86599:CDS |
GCCATATTCCTCCACAACTC+TGG | 0.506491 | 6.1:-50905859 | None:intergenic |
TAAATGGGTATGTGAAATGA+GGG | 0.506863 | 6.1:+50905498 | MS.gene86599:CDS |
AATATGAGGAGGTATCACTA+TGG | 0.509514 | 6.1:+50905944 | MS.gene86599:CDS |
ATAAATGGGTATGTGAAATG+AGG | 0.510310 | 6.1:+50905497 | MS.gene86599:CDS |
AGCAGGGAGGAAGAAGCTTA+AGG | 0.516858 | 6.1:+50905429 | MS.gene86599:CDS |
ACGTTGCAGCAATTGCATTG+AGG | 0.536298 | 6.1:+50905590 | MS.gene86599:CDS |
TCATGCTCCATACTATGTGT+AGG | 0.541468 | 6.1:-50905892 | None:intergenic |
AAGAAGACTAGGATTTGGCT+AGG | 0.549278 | 6.1:+50905529 | MS.gene86599:CDS |
GCTTAAGGAGACTCGCCACC+CGG | 0.555712 | 6.1:+50905444 | MS.gene86599:CDS |
CGAGTCTGCAAAGTTGAGAC+AGG | 0.558907 | 6.1:-50905623 | None:intergenic |
TTACAAGTAACAACGGGGAG+GGG | 0.563550 | 6.1:+50905377 | MS.gene86599:CDS |
TGAGGCAAAAGACATTCAAA+GGG | 0.575611 | 6.1:+50905675 | MS.gene86599:CDS |
TTCCTCACACCTCTATACAC+CGG | 0.578151 | 6.1:-50905463 | None:intergenic |
TCCTCACACCTCTATACACC+GGG | 0.580421 | 6.1:-50905462 | None:intergenic |
TCCTATTCCTGCCACCGCTG+AGG | 0.581983 | 6.1:+50905657 | MS.gene86599:CDS |
GGGAACCGAATAAGAAGACT+AGG | 0.583565 | 6.1:+50905518 | MS.gene86599:CDS |
CTTGTCTGGTCTGAAAGCCT+CGG | 0.583680 | 6.1:-50905713 | None:intergenic |
TAATGACATTGACACGGTTG+TGG | 0.584743 | 6.1:+50905747 | MS.gene86599:CDS |
TTTACAAGTAACAACGGGGA+GGG | 0.587349 | 6.1:+50905376 | MS.gene86599:CDS |
CAAGTAACAACGGGGAGGGG+CGG | 0.588787 | 6.1:+50905380 | MS.gene86599:CDS |
TCAACTTTGCAGACTCGGTG+TGG | 0.601701 | 6.1:+50905629 | MS.gene86599:CDS |
TGTGGCTGTTGTCGTTGCAG+TGG | 0.604136 | 6.1:+50905765 | MS.gene86599:CDS |
ACTTTGCAGACTCGGTGTGG+AGG | 0.609381 | 6.1:+50905632 | MS.gene86599:CDS |
TGTTGAATATGCCAGAGTTG+TGG | 0.615027 | 6.1:+50905848 | MS.gene86599:CDS |
TGTCGTTGCAGTGGAAGAAG+AGG | 0.624573 | 6.1:+50905774 | MS.gene86599:CDS |
GATATGTTTACAAGTAACAA+CGG | 0.629910 | 6.1:+50905370 | None:intergenic |
GTTGCAGCAATTGCATTGAG+GGG | 0.634472 | 6.1:+50905592 | MS.gene86599:CDS |
AGAAGACTAGGATTTGGCTA+GGG | 0.635435 | 6.1:+50905530 | MS.gene86599:CDS |
AATGACTAATGACATTGACA+CGG | 0.658662 | 6.1:+50905741 | MS.gene86599:CDS |
CAAAGTTGAGACAGGCGTAG+CGG | 0.672645 | 6.1:-50905615 | None:intergenic |
ACAAGACTTTCAATATGAGG+AGG | 0.676699 | 6.1:+50905933 | MS.gene86599:CDS |
TGAATATGCCAGAGTTGTGG+AGG | 0.686416 | 6.1:+50905851 | MS.gene86599:CDS |
GTTTACAAGTAACAACGGGG+AGG | 0.703815 | 6.1:+50905375 | MS.gene86599:CDS |
ACCCGGTGTATAGAGGTGTG+AGG | 0.705873 | 6.1:+50905461 | MS.gene86599:CDS |
ATGCTCCATACTATGTGTAG+GGG | 0.710393 | 6.1:-50905890 | None:intergenic |
TCACACCTCTATACACCGGG+TGG | 0.726886 | 6.1:-50905459 | None:intergenic |
TATGTTTACAAGTAACAACG+GGG | 0.831032 | 6.1:+50905372 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
AATGACTAATGACATTGACA+CGG | + | chr6.1:50905741-50905760 | MS.gene86599:CDS | 30.0% | |
AGTACAAGACTTTCAATATG+AGG | + | chr6.1:50905930-50905949 | MS.gene86599:CDS | 30.0% | |
ATAAATGGGTATGTGAAATG+AGG | + | chr6.1:50905497-50905516 | MS.gene86599:CDS | 30.0% | |
GAAGAGGAACTTAGATAAAT+GGG | + | chr6.1:50905483-50905502 | MS.gene86599:CDS | 30.0% | |
TAAATGGGTATGTGAAATGA+GGG | + | chr6.1:50905498-50905517 | MS.gene86599:CDS | 30.0% | |
! | CAAATCCTAGTCTTCTTATT+CGG | - | chr6.1:50905526-50905545 | None:intergenic | 30.0% |
! | TTAGTCATTAAAGTCTTGTC+TGG | - | chr6.1:50905730-50905749 | None:intergenic | 30.0% |
ACAAGACTTTCAATATGAGG+AGG | + | chr6.1:50905933-50905952 | MS.gene86599:CDS | 35.0% | |
CGAATAAGAAGACTAGGATT+TGG | + | chr6.1:50905524-50905543 | MS.gene86599:CDS | 35.0% | |
GGAAGAGGAACTTAGATAAA+TGG | + | chr6.1:50905482-50905501 | MS.gene86599:CDS | 35.0% | |
TGAGGCAAAAGACATTCAAA+GGG | + | chr6.1:50905675-50905694 | MS.gene86599:CDS | 35.0% | |
!! | AATATGAGGAGGTATCACTA+TGG | + | chr6.1:50905944-50905963 | MS.gene86599:CDS | 35.0% |
AAGAAGACTAGGATTTGGCT+AGG | + | chr6.1:50905529-50905548 | MS.gene86599:CDS | 40.0% | |
AATGTCCCCTACACATAGTA+TGG | + | chr6.1:50905885-50905904 | MS.gene86599:CDS | 40.0% | |
AGAAGACTAGGATTTGGCTA+GGG | + | chr6.1:50905530-50905549 | MS.gene86599:CDS | 40.0% | |
ATGCTCCATACTATGTGTAG+GGG | - | chr6.1:50905893-50905912 | None:intergenic | 40.0% | |
CATGCTCCATACTATGTGTA+GGG | - | chr6.1:50905894-50905913 | None:intergenic | 40.0% | |
CTGAGGCAAAAGACATTCAA+AGG | + | chr6.1:50905674-50905693 | MS.gene86599:CDS | 40.0% | |
TAATGACATTGACACGGTTG+TGG | + | chr6.1:50905747-50905766 | MS.gene86599:CDS | 40.0% | |
TCATGCTCCATACTATGTGT+AGG | - | chr6.1:50905895-50905914 | None:intergenic | 40.0% | |
TGAAGTCGAAGAAGAAGAAG+AGG | + | chr6.1:50905822-50905841 | MS.gene86599:CDS | 40.0% | |
TGTTGAATATGCCAGAGTTG+TGG | + | chr6.1:50905848-50905867 | MS.gene86599:CDS | 40.0% | |
TTTACAAGTAACAACGGGGA+GGG | + | chr6.1:50905376-50905395 | MS.gene86599:CDS | 40.0% | |
! | TTGAATGTCTTTTGCCTCAG+CGG | - | chr6.1:50905674-50905693 | None:intergenic | 40.0% |
ACGTTGCAGCAATTGCATTG+AGG | + | chr6.1:50905590-50905609 | MS.gene86599:CDS | 45.0% | |
AGTTGCCCAAAAAAACCAGC+AGG | + | chr6.1:50905412-50905431 | MS.gene86599:CDS | 45.0% | |
CGTTGCAGCAATTGCATTGA+GGG | + | chr6.1:50905591-50905610 | MS.gene86599:CDS | 45.0% | |
CTGTCTCAACTTTGCAGACT+CGG | + | chr6.1:50905624-50905643 | MS.gene86599:CDS | 45.0% | |
GGGAACCGAATAAGAAGACT+AGG | + | chr6.1:50905518-50905537 | MS.gene86599:CDS | 45.0% | |
GTTGCAGCAATTGCATTGAG+GGG | + | chr6.1:50905592-50905611 | MS.gene86599:CDS | 45.0% | |
GTTGCCCAAAAAAACCAGCA+GGG | + | chr6.1:50905413-50905432 | MS.gene86599:CDS | 45.0% | |
GTTTACAAGTAACAACGGGG+AGG | + | chr6.1:50905375-50905394 | MS.gene86599:CDS | 45.0% | |
TGAATATGCCAGAGTTGTGG+AGG | + | chr6.1:50905851-50905870 | MS.gene86599:CDS | 45.0% | |
TTACAAGTAACAACGGGGAG+GGG | + | chr6.1:50905377-50905396 | MS.gene86599:CDS | 45.0% | |
TTCCTCACACCTCTATACAC+CGG | - | chr6.1:50905466-50905485 | None:intergenic | 45.0% | |
! | TGTATAGAGGTGTGAGGAAG+AGG | + | chr6.1:50905467-50905486 | MS.gene86599:CDS | 45.0% |
!!! | TCCTCCCTGCTGGTTTTTTT+GGG | - | chr6.1:50905420-50905439 | None:intergenic | 45.0% |
!!! | TGGTTTTTTTGGGCAACTCG+CGG | - | chr6.1:50905410-50905429 | None:intergenic | 45.0% |
!!! | TTCCTCCCTGCTGGTTTTTT+TGG | - | chr6.1:50905421-50905440 | None:intergenic | 45.0% |
AGCAGGGAGGAAGAAGCTTA+AGG | + | chr6.1:50905429-50905448 | MS.gene86599:CDS | 50.0% | |
CAAAGTTGAGACAGGCGTAG+CGG | - | chr6.1:50905618-50905637 | None:intergenic | 50.0% | |
CGAGTCTGCAAAGTTGAGAC+AGG | - | chr6.1:50905626-50905645 | None:intergenic | 50.0% | |
CTTGTCTGGTCTGAAAGCCT+CGG | - | chr6.1:50905716-50905735 | None:intergenic | 50.0% | |
GCCAGAGTTGTGGAGGAATA+TGG | + | chr6.1:50905858-50905877 | MS.gene86599:CDS | 50.0% | |
GCCATATTCCTCCACAACTC+TGG | - | chr6.1:50905862-50905881 | None:intergenic | 50.0% | |
TCCTCACACCTCTATACACC+GGG | - | chr6.1:50905465-50905484 | None:intergenic | 50.0% | |
TGTCGTTGCAGTGGAAGAAG+AGG | + | chr6.1:50905774-50905793 | MS.gene86599:CDS | 50.0% | |
TTAAGCTTCTTCCTCCCTGC+TGG | - | chr6.1:50905430-50905449 | None:intergenic | 50.0% | |
! | AATGTCTTTTGCCTCAGCGG+TGG | - | chr6.1:50905671-50905690 | None:intergenic | 50.0% |
! | GACTTTTGCAACAGCCGAGA+TGG | + | chr6.1:50905552-50905571 | MS.gene86599:CDS | 50.0% |
!! | TCAACTTTGCAGACTCGGTG+TGG | + | chr6.1:50905629-50905648 | MS.gene86599:CDS | 50.0% |
GCCCAAAAAAACCAGCAGGG+AGG | + | chr6.1:50905416-50905435 | MS.gene86599:CDS | 55.0% | |
TCACACCTCTATACACCGGG+TGG | - | chr6.1:50905462-50905481 | None:intergenic | 55.0% | |
TGTGGCTGTTGTCGTTGCAG+TGG | + | chr6.1:50905765-50905784 | MS.gene86599:CDS | 55.0% | |
TTGCTGCAACGTCGTGTGCA+CGG | - | chr6.1:50905582-50905601 | None:intergenic | 55.0% | |
! | ACCCGGTGTATAGAGGTGTG+AGG | + | chr6.1:50905461-50905480 | MS.gene86599:CDS | 55.0% |
!! | ACTTTGCAGACTCGGTGTGG+AGG | + | chr6.1:50905632-50905651 | MS.gene86599:CDS | 55.0% |
ACTCGCCACCCGGTGTATAG+AGG | + | chr6.1:50905454-50905473 | MS.gene86599:CDS | 60.0% | |
CAAGTAACAACGGGGAGGGG+CGG | + | chr6.1:50905380-50905399 | MS.gene86599:CDS | 60.0% | |
GCTTAAGGAGACTCGCCACC+CGG | + | chr6.1:50905444-50905463 | MS.gene86599:CDS | 60.0% | |
TCCTATTCCTGCCACCGCTG+AGG | + | chr6.1:50905657-50905676 | MS.gene86599:CDS | 60.0% | |
TGCTGCAACGTCGTGTGCAC+GGG | - | chr6.1:50905581-50905600 | None:intergenic | 60.0% | |
! | TCTTTTGCCTCAGCGGTGGC+AGG | - | chr6.1:50905667-50905686 | None:intergenic | 60.0% |
GCCTCAGCGGTGGCAGGAAT+AGG | - | chr6.1:50905661-50905680 | None:intergenic | 65.0% | |
GTGTGCACGGGCAGCCATCT+CGG | - | chr6.1:50905569-50905588 | None:intergenic | 65.0% | |
GGCAGCTGCAGAAGCTGCCG+AGG | + | chr6.1:50905696-50905715 | MS.gene86599:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 50905373 | 50905975 | 50905373 | ID=MS.gene86599 |
chr6.1 | mRNA | 50905373 | 50905975 | 50905373 | ID=MS.gene86599.t1;Parent=MS.gene86599 |
chr6.1 | exon | 50905373 | 50905975 | 50905373 | ID=MS.gene86599.t1.exon1;Parent=MS.gene86599.t1 |
chr6.1 | CDS | 50905373 | 50905975 | 50905373 | ID=cds.MS.gene86599.t1;Parent=MS.gene86599.t1 |
Gene Sequence |
Protein sequence |