AlfalfaGEDB | MS.gene86612

M. sativa cultivar XinJiangDaYe / MS.gene86612

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00847.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene86612.t1	AGR40679.1	86.2	167	19	2	1	166	33	196	8.30E-71	276.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene86612.t1	Q9FJ93	53.4	176	74	2	2	169	31	206	1.4e-42	174.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene86612.t1	S5LSQ2	86.2	167	19	2	1	166	33	196	6.0e-71	276.6

TFs/TRs:

Gene ID	Type	Classification
MS.gene86612.t1	TF	AP2/ERF-ERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene86607	MS.gene86612	PPI
MS.gene86612	MS.gene79318	PPI
MS.gene30852	MS.gene86612	PPI
MS.gene79322	MS.gene86612	PPI
MS.gene86612	MS.gene49040	PPI
MS.gene79326	MS.gene86612	PPI
MS.gene79327	MS.gene86612	PPI
MS.gene86618	MS.gene86612	PPI
MS.gene49251	MS.gene86612	PPI
MS.gene41386	MS.gene86612	PPI
MS.gene006341	MS.gene86612	PPI
MS.gene79314	MS.gene86612	PPI
MS.gene86611	MS.gene86612	PPI
MS.gene34447	MS.gene86612	PPI
MS.gene79320	MS.gene86612	PPI
MS.gene86594	MS.gene86612	PPI
MS.gene79328	MS.gene86612	PPI
MS.gene79310	MS.gene86612	PPI
MS.gene86612	MS.gene30853	PPI
MS.gene86612	MS.gene43297	PPI
MS.gene43298	MS.gene86612	PPI
MS.gene49253	MS.gene86612	PPI
MS.gene30841	MS.gene86612	PPI
MS.gene38658	MS.gene86612	PPI
MS.gene49252	MS.gene86612	PPI
MS.gene86597	MS.gene86612	PPI
MS.gene30844	MS.gene86612	PPI
MS.gene86610	MS.gene86612	PPI
MS.gene30845	MS.gene86612	PPI
MS.gene79307	MS.gene86612	PPI
MS.gene86612	MS.gene79316	PPI
MS.gene79330	MS.gene86612	PPI
MS.gene86601	MS.gene86612	PPI
MS.gene62760	MS.gene86612	PPI
MS.gene79321	MS.gene86612	PPI
MS.gene86588	MS.gene86612	PPI
MS.gene86612	MS.gene79321	PPI
MS.gene30851	MS.gene86612	PPI
MS.gene49255	MS.gene86612	PPI
MS.gene30848	MS.gene86612	PPI
MS.gene86608	MS.gene86612	PPI
MS.gene86615	MS.gene86612	PPI
MS.gene62759	MS.gene86612	PPI
MS.gene30840	MS.gene86612	PPI
MS.gene86596	MS.gene86612	PPI
MS.gene86595	MS.gene86612	PPI
MS.gene62758	MS.gene86612	PPI
MS.gene30842	MS.gene86612	PPI
MS.gene79315	MS.gene86612	PPI
MS.gene86613	MS.gene86612	PPI
MS.gene49250	MS.gene86612	PPI
MS.gene49249	MS.gene86612	PPI
MS.gene86599	MS.gene86612	PPI
MS.gene86591	MS.gene86612	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene86612.t1	MTR_6g466000	93.567	171	6	2	1	166	33	203	6.47e-115	325
MS.gene86612.t1	MTR_6g465460	74.699	166	36	1	1	166	30	189	2.96e-88	259
MS.gene86612.t1	MTR_6g465690	80.838	167	25	2	1	166	39	199	5.78e-88	258
MS.gene86612.t1	MTR_6g465420	74.405	168	35	2	1	166	30	191	1.47e-86	255
MS.gene86612.t1	MTR_6g465430	74.850	167	35	3	1	166	30	190	3.88e-81	241
MS.gene86612.t1	MTR_6g465450	73.810	168	36	2	1	166	30	191	4.01e-81	241
MS.gene86612.t1	MTR_6g465530	74.850	167	39	2	2	166	10	175	4.25e-80	236
MS.gene86612.t1	MTR_6g465510	71.271	181	30	2	2	166	10	184	7.91e-77	228
MS.gene86612.t1	MTR_6g466130	75.148	169	33	2	1	166	42	204	1.73e-76	228
MS.gene86612.t1	MTR_6g465990	78.947	171	11	3	1	166	19	169	8.31e-76	225
MS.gene86612.t1	MTR_1g101600	62.722	169	55	3	3	170	19	180	2.26e-65	199
MS.gene86612.t1	MTR_6g465850	54.839	217	47	3	1	166	39	255	1.23e-57	182
MS.gene86612.t1	MTR_6g466020	57.229	166	47	2	1	166	19	160	9.72e-52	164
MS.gene86612.t1	MTR_5g010930	60.000	130	41	3	3	125	27	152	2.56e-48	156
MS.gene86612.t1	MTR_5g010940	63.717	113	35	1	3	109	32	144	2.34e-46	152
MS.gene86612.t1	MTR_5g010910	62.500	112	36	1	4	109	28	139	3.37e-45	148
MS.gene86612.t1	MTR_4g102660	57.051	156	55	4	3	150	22	173	5.99e-44	145
MS.gene86612.t1	MTR_3g110205	57.895	95	40	0	20	114	38	132	1.45e-33	117
MS.gene86612.t1	MTR_8g006410	66.667	78	26	0	22	99	49	126	1.15e-32	116
MS.gene86612.t1	MTR_7g046260	64.198	81	29	0	19	99	55	135	7.49e-32	114
MS.gene86612.t1	MTR_2g085015	60.000	90	34	2	19	106	41	130	4.13e-31	112
MS.gene86612.t1	MTR_5g012910	52.778	108	44	1	21	128	24	124	1.25e-30	110
MS.gene86612.t1	MTR_7g117690	62.500	80	30	0	20	99	23	102	1.04e-29	107
MS.gene86612.t1	MTR_2g101340	53.465	101	41	2	5	99	15	115	4.36e-29	107
MS.gene86612.t1	MTR_8g013860	60.759	79	31	0	21	99	43	121	5.14e-29	106
MS.gene86612.t1	MTR_8g102800	54.545	99	45	0	15	113	27	125	1.15e-28	106
MS.gene86612.t1	MTR_6g088405	58.974	78	32	0	22	99	41	118	1.51e-27	103
MS.gene86612.t1	MTR_8g027465	53.000	100	41	2	3	99	20	116	1.90e-27	102
MS.gene86612.t1	MTR_4g100650	60.256	78	31	0	22	99	71	148	3.00e-27	103
MS.gene86612.t1	MTR_4g102670	55.000	80	35	1	21	100	11	89	1.66e-24	94.0
MS.gene86612.t1	MTR_6g088425	49.123	114	48	1	3	106	17	130	1.39e-23	93.2
MS.gene86612.t1	MTR_4g035430	47.423	97	46	1	10	106	22	113	3.79e-23	92.0
MS.gene86612.t1	MTR_1g006660	55.319	94	38	1	10	99	28	121	3.20e-22	90.1
MS.gene86612.t1	MTR_5g008590	51.020	98	48	0	25	122	11	108	1.34e-19	81.6
MS.gene86612.t1	MTR_1g060910	33.708	178	80	6	9	171	3	157	4.35e-18	77.4
MS.gene86612.t1	MTR_1g014780	55.000	60	27	0	24	83	37	96	2.66e-17	76.6
MS.gene86612.t1	MTR_2g435590	50.667	75	34	1	9	83	83	154	3.21e-17	77.0
MS.gene86612.t1	MTR_5g083340	60.345	58	23	0	25	82	85	142	3.72e-17	78.2
MS.gene86612.t1	MTR_3g102100	58.929	56	23	0	25	80	45	100	4.05e-17	75.1
MS.gene86612.t1	MTR_5g008550	40.800	125	66	2	25	141	21	145	5.68e-17	75.1
MS.gene86612.t1	MTR_2g105380	48.611	72	37	0	13	84	105	176	2.90e-16	75.5
MS.gene86612.t1	MTR_3g074130	52.632	76	33	2	6	80	132	205	3.32e-16	75.1
MS.gene86612.t1	MTR_1g090170	55.738	61	27	0	20	80	147	207	3.51e-16	74.7
MS.gene86612.t1	MTR_7g020980	43.210	81	46	0	21	101	47	127	4.19e-16	72.4
MS.gene86612.t1	MTR_1g019110	43.023	86	46	1	25	110	44	126	5.15e-16	72.4
MS.gene86612.t1	MTR_8g090350	57.895	57	24	0	24	80	112	168	5.51e-16	73.9
MS.gene86612.t1	MTR_2g043050	34.677	124	73	2	24	146	18	134	5.89e-16	72.8
MS.gene86612.t1	MTR_5g062700	57.627	59	25	0	24	82	172	230	6.70e-16	74.3
MS.gene86612.t1	MTR_1g090170	55.738	61	27	0	20	80	234	294	7.52e-16	74.3
MS.gene86612.t1	MTR_1g014820	40.217	92	51	1	24	111	26	117	7.88e-16	73.2
MS.gene86612.t1	MTR_2g090235	57.627	59	25	0	24	82	217	275	8.94e-16	74.3
MS.gene86612.t1	MTR_1g014860	53.333	60	28	0	24	83	21	80	1.15e-15	72.0
MS.gene86612.t1	MTR_2g089170	41.176	102	57	2	25	123	65	166	1.19e-15	71.2
MS.gene86612.t1	MTR_7g021010	42.529	87	49	1	18	103	4	90	1.27e-15	70.1
MS.gene86612.t1	MTR_1g087920	46.341	82	42	1	3	82	53	134	1.49e-15	73.2
MS.gene86612.t1	MTR_4g086220	58.929	56	23	0	25	80	96	151	1.65e-15	72.0
MS.gene86612.t1	MTR_3g105510	42.353	85	49	0	25	109	37	121	1.70e-15	72.0
MS.gene86612.t1	MTR_5g016750	55.357	56	25	0	25	80	25	80	2.20e-15	70.5
MS.gene86612.t1	MTR_3g053690	57.812	64	24	1	17	80	22	82	2.21e-15	71.2
MS.gene86612.t1	MTR_5g083330	50.685	73	36	0	10	82	20	92	2.22e-15	72.4
MS.gene86612.t1	MTR_5g008470	42.857	84	48	0	27	110	77	160	2.52e-15	70.5
MS.gene86612.t1	MTR_7g021010	41.975	81	47	0	23	103	49	129	2.58e-15	70.1
MS.gene86612.t1	MTR_2g078680	58.929	56	23	0	25	80	31	86	3.35e-15	70.5
MS.gene86612.t1	MTR_1g014800	51.667	60	29	0	24	83	30	89	3.71e-15	70.9
MS.gene86612.t1	MTR_8g092460	57.143	56	24	0	25	80	145	200	4.35e-15	71.6
MS.gene86612.t1	MTR_8g022820	38.053	113	59	2	15	122	113	219	4.70e-15	72.0
MS.gene86612.t1	MTR_8g022820	38.053	113	59	2	15	122	114	220	4.72e-15	72.0
MS.gene86612.t1	MTR_8g022820	38.053	113	59	2	15	122	114	220	4.72e-15	72.0
MS.gene86612.t1	MTR_4g086160	57.143	56	24	0	25	80	96	151	5.80e-15	70.5
MS.gene86612.t1	MTR_4g086190	57.143	56	24	0	25	80	96	151	6.29e-15	70.5
MS.gene86612.t1	MTR_4g086165	57.143	56	24	0	25	80	82	137	6.37e-15	69.7
MS.gene86612.t1	MTR_5g082950	60.714	56	22	0	25	80	66	121	6.83e-15	71.2
MS.gene86612.t1	MTR_7g028925	53.333	60	25	1	24	83	28	84	7.31e-15	67.0
MS.gene86612.t1	MTR_1g074310	53.226	62	28	1	25	85	21	82	8.18e-15	68.2
MS.gene86612.t1	MTR_1g028560	53.846	65	27	1	25	89	115	176	9.41e-15	71.2
MS.gene86612.t1	MTR_2g043030	39.560	91	55	0	24	114	18	108	1.00e-14	69.3
MS.gene86612.t1	MTR_0939s0010	57.143	56	24	0	25	80	65	120	1.26e-14	68.9
MS.gene86612.t1	MTR_7g092190	58.929	56	23	0	25	80	30	85	1.50e-14	70.1
MS.gene86612.t1	MTR_2g438180	54.839	62	27	1	25	85	14	75	2.15e-14	66.6
MS.gene86612.t1	MTR_2g015050	50.725	69	33	1	13	80	122	190	2.21e-14	69.3
MS.gene86612.t1	MTR_4g078710	41.558	77	45	0	25	101	28	104	3.03e-14	68.2
MS.gene86612.t1	MTR_3g105480	42.169	83	48	0	27	109	33	115	4.27e-14	68.2
MS.gene86612.t1	MTR_4g114570	55.357	56	25	0	25	80	7	62	4.54e-14	67.8
MS.gene86612.t1	MTR_4g010640	55.357	56	25	0	25	80	7	62	5.61e-14	67.4
MS.gene86612.t1	MTR_2g014340	49.296	71	33	1	10	80	7	74	7.30e-14	67.0
MS.gene86612.t1	MTR_3g106290	58.929	56	23	0	25	80	8	63	9.11e-14	66.6
MS.gene86612.t1	MTR_5g009620	49.333	75	28	2	12	80	97	167	9.24e-14	68.2
MS.gene86612.t1	MTR_1g048610	54.386	57	25	1	25	80	89	145	1.33e-13	66.6
MS.gene86612.t1	MTR_1g070070	54.386	57	25	1	25	80	21	77	1.42e-13	65.1
MS.gene86612.t1	MTR_2g103700	53.571	56	26	0	25	80	7	62	1.57e-13	65.5
MS.gene86612.t1	MTR_4g008860	58.929	56	23	0	25	80	8	63	1.59e-13	65.9
MS.gene86612.t1	MTR_1g074230	56.140	57	24	1	25	80	19	75	2.05e-13	64.3
MS.gene86612.t1	MTR_4g100450	43.210	81	45	1	1	80	130	210	2.25e-13	67.0
MS.gene86612.t1	MTR_1g101550	39.007	141	80	3	25	160	57	196	2.32e-13	66.2
MS.gene86612.t1	MTR_2g014300	57.143	56	24	0	25	80	15	70	2.71e-13	64.7
MS.gene86612.t1	MTR_4g100420	47.297	74	36	2	8	80	142	213	4.03e-13	66.2
MS.gene86612.t1	MTR_1g074250	50.794	63	29	1	22	82	16	78	5.41e-13	63.2
MS.gene86612.t1	MTR_2g016730	41.111	90	47	2	14	102	11	95	5.82e-13	65.9
MS.gene86612.t1	MTR_5g085100	47.368	76	37	1	5	80	29	101	9.97e-13	65.1
MS.gene86612.t1	MTR_3g090760	42.500	80	37	1	1	80	98	168	1.20e-12	65.1
MS.gene86612.t1	MTR_2g043040	38.824	85	52	0	24	108	18	102	2.42e-12	63.2
MS.gene86612.t1	MTR_4g054360	50.000	64	31	1	18	80	117	180	3.69e-12	63.2
MS.gene86612.t1	MTR_5g085070	52.381	63	27	1	18	80	47	106	4.16e-12	63.2
MS.gene86612.t1	MTR_1g090290	50.000	62	28	2	20	80	110	169	4.33e-12	62.0
MS.gene86612.t1	MTR_4g088005	46.377	69	36	1	13	80	45	113	4.92e-12	60.5
MS.gene86612.t1	MTR_8g069360	51.786	56	27	0	25	80	44	99	4.94e-12	63.5
MS.gene86612.t1	MTR_4g111915	45.763	59	32	0	25	83	53	111	5.45e-12	60.5
MS.gene86612.t1	MTR_6g012970	41.053	95	44	2	1	95	22	104	7.09e-12	63.2
MS.gene86612.t1	MTR_2g043020	37.363	91	57	0	24	114	18	108	7.72e-12	61.6
MS.gene86612.t1	MTR_5g075570	46.667	60	32	0	21	80	120	179	1.15e-11	62.0
MS.gene86612.t1	MTR_8g099215	44.304	79	38	1	8	80	84	162	1.33e-11	62.0
MS.gene86612.t1	MTR_4g054740	48.438	64	32	1	18	80	90	153	1.37e-11	61.2
MS.gene86612.t1	MTR_3g072610	45.055	91	42	3	25	109	25	113	1.50e-11	60.8
MS.gene86612.t1	MTR_5g008790	29.078	141	80	3	25	149	18	154	1.57e-11	60.1
MS.gene86612.t1	MTR_6g029180	46.479	71	37	1	10	80	19	88	1.93e-11	61.6
MS.gene86612.t1	MTR_4g112490	45.763	59	32	0	25	83	53	111	2.10e-11	60.5
MS.gene86612.t1	MTR_8g006840	50.877	57	27	1	25	80	125	181	2.21e-11	60.1
MS.gene86612.t1	MTR_5g008540	45.902	61	33	0	27	87	26	86	2.32e-11	57.8
MS.gene86612.t1	MTR_4g100380	54.386	57	25	1	25	80	145	201	2.75e-11	60.8
MS.gene86612.t1	MTR_5g032820	53.571	56	26	0	25	80	46	101	3.66e-11	60.8
MS.gene86612.t1	MTR_1g069985	51.724	58	27	1	25	81	75	132	4.01e-11	59.7
MS.gene86612.t1	MTR_2g015040	50.877	57	27	1	25	80	63	119	4.20e-11	58.5
MS.gene86612.t1	MTR_7g085810	50.000	56	28	0	25	80	30	85	4.47e-11	60.1
MS.gene86612.t1	MTR_7g081815	50.877	57	27	1	25	80	61	117	4.93e-11	59.3
MS.gene86612.t1	MTR_8g006815	50.877	57	27	1	25	80	96	152	5.07e-11	59.3
MS.gene86612.t1	MTR_7g081805	50.877	57	27	1	25	80	61	117	5.47e-11	59.3
MS.gene86612.t1	MTR_8g032610	42.667	75	40	1	25	99	27	98	6.49e-11	60.1
MS.gene86612.t1	MTR_8g085960	49.123	57	29	0	25	81	25	81	7.22e-11	59.3
MS.gene86612.t1	MTR_7g096750	52.632	57	26	1	25	80	20	76	7.39e-11	57.8
MS.gene86612.t1	MTR_1g070020	45.588	68	36	1	15	81	60	127	9.12e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene86612.t1	AT5G51990	53.977	176	73	2	2	169	31	206	1.13e-59	185
MS.gene86612.t1	AT4G25470	54.144	181	77	3	2	177	28	207	2.15e-59	184
MS.gene86612.t1	AT4G25490	57.558	172	67	3	3	169	26	196	1.76e-56	177
MS.gene86612.t1	AT4G25480	59.748	159	62	2	3	160	29	186	2.36e-55	174
MS.gene86612.t1	AT1G63030	68.807	109	34	0	3	111	8	116	8.37e-53	166
MS.gene86612.t1	AT1G63030	68.807	109	34	0	3	111	8	116	8.37e-53	166
MS.gene86612.t1	AT1G12610	68.807	109	34	0	3	111	8	116	5.06e-52	166
MS.gene86612.t1	AT5G25810	58.511	94	38	1	14	106	24	117	1.09e-33	119
MS.gene86612.t1	AT5G11590	57.143	98	39	1	9	106	38	132	1.06e-31	114
MS.gene86612.t1	AT2G44940	60.215	93	37	0	14	106	89	181	2.37e-31	115
MS.gene86612.t1	AT4G32800	51.402	107	46	1	12	112	6	112	3.29e-31	112
MS.gene86612.t1	AT2G35700	61.250	80	31	0	20	99	40	119	1.26e-29	108
MS.gene86612.t1	AT1G01250	60.000	80	32	0	20	99	40	119	1.48e-28	105
MS.gene86612.t1	AT3G16280	59.494	79	32	0	21	99	57	135	2.83e-28	105
MS.gene86612.t1	AT4G16750	58.025	81	34	0	20	100	35	115	4.22e-28	103
MS.gene86612.t1	AT3G16280	59.494	79	32	0	21	99	75	153	4.42e-28	105
MS.gene86612.t1	AT2G36450	42.949	156	85	2	13	164	3	158	5.43e-27	100
MS.gene86612.t1	AT2G25820	60.526	76	30	0	24	99	25	100	4.98e-26	99.8
MS.gene86612.t1	AT3G60490	60.000	75	30	0	25	99	71	145	7.62e-26	99.8
MS.gene86612.t1	AT1G71450	55.556	81	36	0	25	105	24	104	3.97e-23	90.9
MS.gene86612.t1	AT2G47520	48.101	79	37	1	2	80	31	105	1.66e-19	81.3
MS.gene86612.t1	AT1G21910	45.652	92	43	1	25	109	50	141	4.74e-19	81.3
MS.gene86612.t1	AT1G77200	57.143	77	33	0	23	99	41	117	5.70e-19	81.3
MS.gene86612.t1	AT5G52020	40.385	156	71	5	21	164	61	206	6.05e-19	81.3
MS.gene86612.t1	AT1G46768	57.143	63	26	1	20	82	27	88	1.07e-18	78.2
MS.gene86612.t1	AT1G46768	57.143	63	26	1	20	82	27	88	1.38e-18	78.2
MS.gene86612.t1	AT1G46768	57.143	63	26	1	20	82	27	88	1.38e-18	78.2
MS.gene86612.t1	AT1G33760	50.562	89	44	0	25	113	20	108	1.82e-18	79.0
MS.gene86612.t1	AT4G13620	59.322	59	24	0	24	82	231	289	2.52e-18	81.3
MS.gene86612.t1	AT1G22190	53.425	73	32	1	10	82	70	140	9.14e-18	78.6
MS.gene86612.t1	AT3G16770	52.564	78	30	1	5	82	66	136	9.61e-18	78.2
MS.gene86612.t1	AT5G21960	46.429	84	45	0	23	106	5	88	1.55e-17	77.0
MS.gene86612.t1	AT4G39780	57.377	61	26	0	20	80	88	148	2.70e-17	77.4
MS.gene86612.t1	AT4G06746	51.613	62	30	0	25	86	36	97	4.94e-17	74.3
MS.gene86612.t1	AT3G50260	43.617	94	42	2	18	106	14	101	5.17e-17	74.3
MS.gene86612.t1	AT1G71520	36.691	139	64	5	19	149	8	130	9.31e-17	73.2
MS.gene86612.t1	AT4G36900	55.000	60	27	0	21	80	26	85	1.60e-16	73.9
MS.gene86612.t1	AT2G22200	59.649	57	23	0	24	80	70	126	1.96e-16	75.1
MS.gene86612.t1	AT2G20880	46.341	82	42	1	1	82	165	244	2.67e-16	75.5
MS.gene86612.t1	AT2G23340	57.143	56	24	0	25	80	28	83	3.27e-16	72.8
MS.gene86612.t1	AT1G78080	57.627	59	25	0	24	82	151	209	3.77e-16	75.1
MS.gene86612.t1	AT5G67190	55.357	56	25	0	25	80	21	76	3.87e-16	72.8
MS.gene86612.t1	AT3G11020	54.545	66	30	0	19	84	72	137	4.39e-16	74.7
MS.gene86612.t1	AT1G75490	32.867	143	87	2	24	164	41	176	6.64e-16	72.4
MS.gene86612.t1	AT5G05410	58.929	56	23	0	25	80	79	134	9.57e-16	73.6
MS.gene86612.t1	AT2G33710	55.738	61	27	0	20	80	65	125	1.05e-15	72.4
MS.gene86612.t1	AT5G05410	58.929	56	23	0	25	80	79	134	1.11e-15	73.6
MS.gene86612.t1	AT1G74930	41.860	86	50	0	25	110	21	106	1.16e-15	71.6
MS.gene86612.t1	AT2G33710	55.738	61	27	0	20	80	65	125	1.17e-15	72.4
MS.gene86612.t1	AT1G36060	59.649	57	23	0	24	80	142	198	1.66e-15	73.2
MS.gene86612.t1	AT1G12630	59.459	74	29	1	21	94	15	87	1.67e-15	71.2
MS.gene86612.t1	AT4G28140	54.237	59	27	0	24	82	142	200	2.34e-15	72.4
MS.gene86612.t1	AT1G19210	41.111	90	53	0	25	114	12	101	2.74e-15	70.5
MS.gene86612.t1	AT3G61630	36.000	125	75	3	25	147	105	226	3.36e-15	72.0
MS.gene86612.t1	AT3G15210	57.143	63	24	1	18	80	21	80	3.67e-15	70.9
MS.gene86612.t1	AT5G65130	55.932	59	26	0	24	82	110	168	3.83e-15	71.6
MS.gene86612.t1	AT5G65130	55.932	59	26	0	24	82	112	170	4.03e-15	71.6
MS.gene86612.t1	AT5G44210	52.174	69	28	1	25	93	33	96	4.19e-15	70.1
MS.gene86612.t1	AT5G61600	59.016	61	22	2	21	80	86	144	9.36e-15	70.1
MS.gene86612.t1	AT5G13330	53.226	62	27	1	21	82	37	96	1.19e-14	69.3
MS.gene86612.t1	AT3G57600	57.143	56	24	0	25	80	28	83	1.29e-14	70.1
MS.gene86612.t1	AT1G72360	44.737	76	42	0	5	80	54	129	1.33e-14	70.1
MS.gene86612.t1	AT4G31060	41.237	97	49	3	15	108	22	113	1.39e-14	68.6
MS.gene86612.t1	AT1G03800	50.000	68	31	1	13	80	44	108	1.82e-14	69.3
MS.gene86612.t1	AT5G61890	55.000	60	25	1	21	80	88	145	1.89e-14	69.3
MS.gene86612.t1	AT1G15360	57.143	56	24	0	25	80	7	62	2.06e-14	68.6
MS.gene86612.t1	AT1G15360	57.143	56	24	0	25	80	7	62	2.06e-14	68.6
MS.gene86612.t1	AT5G51190	55.556	63	25	2	19	80	68	128	2.70e-14	68.6
MS.gene86612.t1	AT1G22810	40.860	93	40	3	25	109	14	99	4.08e-14	66.2
MS.gene86612.t1	AT4G27950	54.386	57	26	0	25	81	118	174	4.71e-14	68.9
MS.gene86612.t1	AT4G11140	43.210	81	37	2	25	105	87	158	4.90e-14	68.6
MS.gene86612.t1	AT5G43410	53.333	60	27	1	22	80	12	71	6.07e-14	65.5
MS.gene86612.t1	AT5G47230	54.688	64	26	2	18	80	151	212	6.89e-14	68.6
MS.gene86612.t1	AT1G72360	47.619	63	33	0	18	80	18	80	7.93e-14	67.0
MS.gene86612.t1	AT5G07580	55.556	63	25	2	19	80	106	166	9.27e-14	66.6
MS.gene86612.t1	AT5G25390	53.571	56	26	0	25	80	7	62	1.26e-13	66.2
MS.gene86612.t1	AT3G23230	50.000	62	30	1	25	85	20	81	1.28e-13	65.1
MS.gene86612.t1	AT1G72360	51.786	56	27	0	25	80	76	131	1.94e-13	66.6
MS.gene86612.t1	AT5G53290	54.386	57	26	0	25	81	125	181	2.16e-13	67.4
MS.gene86612.t1	AT5G25190	57.143	56	24	0	25	80	8	63	5.00e-13	64.3
MS.gene86612.t1	AT3G20310	51.613	62	30	0	19	80	21	82	6.30e-13	65.1
MS.gene86612.t1	AT1G28370	53.571	56	26	0	25	80	20	75	7.28e-13	63.5
MS.gene86612.t1	AT1G28360	57.143	56	24	0	25	80	12	67	7.97e-13	63.9
MS.gene86612.t1	AT4G23750	52.632	57	27	0	25	81	122	178	9.38e-13	65.5
MS.gene86612.t1	AT4G23750	52.632	57	27	0	25	81	122	178	9.38e-13	65.5
MS.gene86612.t1	AT5G18450	54.386	57	26	0	24	80	33	89	1.08e-12	65.1
MS.gene86612.t1	AT1G28370	53.571	56	26	0	25	80	58	113	1.29e-12	63.5
MS.gene86612.t1	AT4G17490	53.125	64	27	2	18	80	132	193	1.83e-12	64.3
MS.gene86612.t1	AT2G40340	46.377	69	37	0	25	93	14	82	2.04e-12	64.3
MS.gene86612.t1	AT2G40340	46.377	69	37	0	25	93	14	82	2.04e-12	64.3
MS.gene86612.t1	AT2G40340	46.377	69	37	0	25	93	14	82	2.04e-12	64.3
MS.gene86612.t1	AT5G64750	44.286	70	38	1	35	104	195	263	2.15e-12	64.7
MS.gene86612.t1	AT2G40340	46.377	69	37	0	25	93	72	140	2.88e-12	63.9
MS.gene86612.t1	AT5G47220	54.386	57	25	1	25	80	117	173	2.98e-12	63.2
MS.gene86612.t1	AT2G40350	45.833	72	32	1	25	96	74	138	3.11e-12	62.0
MS.gene86612.t1	AT2G40340	46.377	69	37	0	25	93	72	140	3.11e-12	63.9
MS.gene86612.t1	AT1G50640	55.357	56	25	0	25	80	28	83	3.58e-12	62.8
MS.gene86612.t1	AT2G40340	46.377	69	37	0	25	93	79	147	3.65e-12	63.9
MS.gene86612.t1	AT5G19790	44.872	78	39	2	6	82	5	79	3.68e-12	63.2
MS.gene86612.t1	AT2G40350	45.833	72	32	1	25	96	67	131	3.69e-12	61.6
MS.gene86612.t1	AT1G12890	43.590	78	41	1	3	80	2	76	5.36e-12	62.4
MS.gene86612.t1	AT2G46310	50.000	56	28	0	25	80	99	154	8.06e-12	62.4
MS.gene86612.t1	AT3G23240	50.000	58	28	1	25	81	82	139	1.12e-11	61.2
MS.gene86612.t1	AT5G61590	56.338	71	28	2	11	80	95	163	1.73e-11	60.5
MS.gene86612.t1	AT5G25390	51.786	56	24	1	25	80	7	59	1.76e-11	60.5
MS.gene86612.t1	AT1G77640	45.556	90	43	1	25	108	43	132	1.99e-11	60.8
MS.gene86612.t1	AT4G17500	54.386	57	25	1	25	80	148	204	2.05e-11	61.2
MS.gene86612.t1	AT1G12980	52.632	57	27	0	25	81	57	113	3.68e-11	60.8
MS.gene86612.t1	AT2G44840	52.632	57	26	1	25	80	92	148	4.31e-11	59.7
MS.gene86612.t1	AT1G24590	48.485	66	31	1	25	90	58	120	5.56e-11	60.1
MS.gene86612.t1	AT5G07310	49.315	73	35	1	21	93	90	160	8.41e-11	59.3

Find 63 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCCTCCCTGCACGCTTCTT+TGG	0.182335	6.1:-50597179	None:intergenic
TCCTCCCTGCACGCTTCTTT+GGG	0.183287	6.1:-50597178	None:intergenic
GCTTGAGTAGTGGCAAGTTT+GGG	0.252418	6.1:-50597419	None:intergenic
GGAAGAGGAACTTAGATAAA+TGG	0.256718	6.1:+50597243	MS.gene86612:CDS
TGCTTGAGTAGTGGCAAGTT+TGG	0.261331	6.1:-50597420	None:intergenic
AGACTCGCCACCCGGTTTAT+AGG	0.271435	6.1:+50597213	MS.gene86612:CDS
GACTCGCCACCCGGTTTATA+GGG	0.279807	6.1:+50597214	MS.gene86612:CDS
CAAATCTTAGTCTTCTTGTT+AGG	0.302996	6.1:-50597284	None:intergenic
GCAAGAGATGTGGAGTAATA+TGG	0.359320	6.1:+50597613	MS.gene86612:CDS
TTCCTCACACCCCTATAAAC+CGG	0.407351	6.1:-50597224	None:intergenic
GTCCCCTACACATATAGCTT+GGG	0.414141	6.1:+50597643	MS.gene86612:CDS
CTAACAAGAAGACTAAGATT+TGG	0.415274	6.1:+50597285	MS.gene86612:CDS
GAAGAGGAACTTAGATAAAT+GGG	0.434368	6.1:+50597244	MS.gene86612:CDS
CGGGCTGCCATCTCCGCAGT+TGG	0.438064	6.1:-50597320	None:intergenic
TGTTGCTGCAATGGCGTTGA+GGG	0.453068	6.1:+50597352	MS.gene86612:CDS
TTAGTCATTAAAGTCTTGTC+TGG	0.455176	6.1:-50597488	None:intergenic
GACTTTCCCAACTGCGGAGA+TGG	0.475508	6.1:+50597313	MS.gene86612:CDS
GAAAGCCTCGGCGGCTTCTG+TGG	0.479679	6.1:-50597462	None:intergenic
GGAGCAGAGTATGATTTGTA+TGG	0.487031	6.1:+50597565	MS.gene86612:CDS
TTTATAGGGGTGTGAGGAAG+AGG	0.495409	6.1:+50597228	MS.gene86612:CDS
TGTCCCCTACACATATAGCT+TGG	0.502807	6.1:+50597642	MS.gene86612:CDS
TTGCAGCAACATCGTGGGCA+CGG	0.505055	6.1:-50597340	None:intergenic
TACCCCAAGCTATATGTGTA+GGG	0.507835	6.1:-50597646	None:intergenic
TCAAGCAAAGGATATACAAA+AGG	0.508834	6.1:+50597436	MS.gene86612:CDS
GGGCTGCCATCTCCGCAGTT+GGG	0.512762	6.1:-50597319	None:intergenic
AGTACCCCAAAGAAGCGTGC+AGG	0.514884	6.1:+50597173	MS.gene86612:CDS
TGCAGCAACATCGTGGGCAC+GGG	0.517231	6.1:-50597339	None:intergenic
AAGAAGACTAAGATTTGGCT+AGG	0.530738	6.1:+50597290	MS.gene86612:CDS
ACTCTGCTCCTCAGTGGCAG+TGG	0.533696	6.1:-50597552	None:intergenic
TGCCCACGATGTTGCTGCAA+TGG	0.535148	6.1:+50597343	MS.gene86612:CDS
CCTCCCTGCACGCTTCTTTG+GGG	0.536976	6.1:-50597177	None:intergenic
TAAATGGGTGTGTGAAATGA+GGG	0.541686	6.1:+50597259	MS.gene86612:CDS
CTTGAGTAGTGGCAAGTTTG+GGG	0.545121	6.1:-50597418	None:intergenic
ATTCAAGGAGACTCGCCACC+CGG	0.546885	6.1:+50597205	MS.gene86612:CDS
GGAGTCTGAAAAGTTGAGAC+AGG	0.550564	6.1:-50597384	None:intergenic
ATACCCCAAGCTATATGTGT+AGG	0.551911	6.1:-50597647	None:intergenic
TATATCCTTTGCTTGAGTAG+TGG	0.552510	6.1:-50597429	None:intergenic
TGCAGGGAGGAAGAAATTCA+AGG	0.566465	6.1:+50597190	MS.gene86612:CDS
CGCCATTGCAGCAACATCGT+GGG	0.572570	6.1:-50597345	None:intergenic
ATGTTGCTGCAATGGCGTTG+AGG	0.582656	6.1:+50597351	MS.gene86612:CDS
ATAAATGGGTGTGTGAAATG+AGG	0.586819	6.1:+50597258	MS.gene86612:CDS
TCCTCACACCCCTATAAACC+GGG	0.590098	6.1:-50597223	None:intergenic
GGCAGCCACAGAAGCCGCCG+AGG	0.600547	6.1:+50597457	MS.gene86612:CDS
GCTAGGGACTTTCCCAACTG+CGG	0.614545	6.1:+50597307	MS.gene86612:CDS
CTTGTCTGGTCTGAAAGCCT+CGG	0.615056	6.1:-50597474	None:intergenic
GTACCCCAAAGAAGCGTGCA+GGG	0.618476	6.1:+50597174	MS.gene86612:CDS
TCCCCTACACATATAGCTTG+GGG	0.620115	6.1:+50597644	MS.gene86612:CDS
ACTTGCCACTACTCAAGCAA+AGG	0.628827	6.1:+50597424	MS.gene86612:CDS
ACTCGCCACCCGGTTTATAG+GGG	0.631587	6.1:+50597215	MS.gene86612:CDS
CAATGACAAAGATAATAACA+TGG	0.634558	6.1:+50597520	MS.gene86612:CDS
AGAAGACTAAGATTTGGCTA+GGG	0.636297	6.1:+50597291	MS.gene86612:CDS
TGATGAACATGCAAGAGATG+TGG	0.638459	6.1:+50597603	MS.gene86612:CDS
ACCCGGTTTATAGGGGTGTG+AGG	0.640954	6.1:+50597222	MS.gene86612:CDS
ACGCCATTGCAGCAACATCG+TGG	0.645854	6.1:-50597346	None:intergenic
TGTAGTTGCCACTGCCACTG+AGG	0.650429	6.1:+50597544	MS.gene86612:CDS
ACCCCAAGCTATATGTGTAG+GGG	0.654785	6.1:-50597645	None:intergenic
AAGTTTGGGGAGCCGCCACG+CGG	0.662968	6.1:-50597405	None:intergenic
GTTGCTGCAATGGCGTTGAG+GGG	0.672747	6.1:+50597353	MS.gene86612:CDS
GTCTGGTCTGAAAGCCTCGG+CGG	0.673207	6.1:-50597471	None:intergenic
AAAAGTTGAGACAGGCGTAG+CGG	0.695347	6.1:-50597376	None:intergenic
AATCATACTCTGCTCCTCAG+TGG	0.695978	6.1:-50597558	None:intergenic
CCCCAAAGAAGCGTGCAGGG+AGG	0.699462	6.1:+50597177	MS.gene86612:CDS
TCACACCCCTATAAACCGGG+TGG	0.747818	6.1:-50597220	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GATTTACATTTATTTATTTT+TGG	+	chr6.1:50597928-50597947	MS.gene86612:intron	10.0%
!!!	GAGTTTTTAATTTTTTTTGT+AGG	+	chr6.1:50597872-50597891	MS.gene86612:intron	15.0%
!!!	TAATTTTTTTTGTAGGAAAA+TGG	+	chr6.1:50597879-50597898	MS.gene86612:intron	15.0%
!!	CATTGAATAACTAATGTATT+TGG	-	chr6.1:50597769-50597788	None:intergenic	20.0%
!!!	AAACCTTTTTATTAGTAGTA+CGG	+	chr6.1:50597979-50597998	MS.gene86612:intron	20.0%
!!!	TTTATTTTTGGATTGTAGAA+TGG	+	chr6.1:50597940-50597959	MS.gene86612:intron	20.0%
!	AATCCGTACTACTAATAAAA+AGG	-	chr6.1:50597985-50598004	None:intergenic	25.0%
!	CAATGACAAAGATAATAACA+TGG	+	chr6.1:50597520-50597539	MS.gene86612:CDS	25.0%
!!	TAAGCAAAAATCAACGTTTT+AGG	+	chr6.1:50597705-50597724	MS.gene86612:intron	25.0%
!!	TAAGCAAAACACAACTTTTT+AGG	-	chr6.1:50597794-50597813	None:intergenic	25.0%
!!	TTTTTGCTTATATATGTGAC+CGG	-	chr6.1:50597695-50597714	None:intergenic	25.0%
	CTAACAAGAAGACTAAGATT+TGG	+	chr6.1:50597285-50597304	MS.gene86612:CDS	30.0%
	GAAGAGGAACTTAGATAAAT+GGG	+	chr6.1:50597244-50597263	MS.gene86612:CDS	30.0%
	TAATGAAGACTTTCAAGATG+AGG	+	chr6.1:50597836-50597855	MS.gene86612:intron	30.0%
	TCAAGCAAAGGATATACAAA+AGG	+	chr6.1:50597436-50597455	MS.gene86612:CDS	30.0%
!	CAAATCTTAGTCTTCTTGTT+AGG	-	chr6.1:50597287-50597306	None:intergenic	30.0%
!	GATTCTTGATAGGTTGAAAT+TGG	+	chr6.1:50598001-50598020	MS.gene86612:intron	30.0%
!	TTAGTCATTAAAGTCTTGTC+TGG	-	chr6.1:50597491-50597510	None:intergenic	30.0%
!	TTGATAGGTTGAAATTGGAA+AGG	+	chr6.1:50598006-50598025	MS.gene86612:intron	30.0%
!!!	AAATCAACGTTTTAGGTTCA+TGG	+	chr6.1:50597712-50597731	MS.gene86612:intron	30.0%
	AAGAAGACTAAGATTTGGCT+AGG	+	chr6.1:50597290-50597309	MS.gene86612:CDS	35.0%
	AGAAGACTAAGATTTGGCTA+GGG	+	chr6.1:50597291-50597310	MS.gene86612:CDS	35.0%
	ATAAATGGGTGTGTGAAATG+AGG	+	chr6.1:50597258-50597277	MS.gene86612:CDS	35.0%
	GGAAGAGGAACTTAGATAAA+TGG	+	chr6.1:50597243-50597262	MS.gene86612:CDS	35.0%
	TAAATGGGTGTGTGAAATGA+GGG	+	chr6.1:50597259-50597278	MS.gene86612:CDS	35.0%
	TAGTAGTACGGATTCTTGAT+AGG	+	chr6.1:50597991-50598010	MS.gene86612:intron	35.0%
	TATATCCTTTGCTTGAGTAG+TGG	-	chr6.1:50597432-50597451	None:intergenic	35.0%
	TGCTTATAAATGTGACCAGA+GGG	+	chr6.1:50597808-50597827	MS.gene86612:intron	35.0%
	TTGCTTATAAATGTGACCAG+AGG	+	chr6.1:50597807-50597826	MS.gene86612:intron	35.0%
	AAGATGAGGAGGTTTCACTA+TGG	+	chr6.1:50597850-50597869	MS.gene86612:intron	40.0%
	ATACCCCAAGCTATATGTGT+AGG	-	chr6.1:50597650-50597669	None:intergenic	40.0%
	GAGTATGAATATACTCCCTC+CGG	+	chr6.1:50597673-50597692	MS.gene86612:intron	40.0%
	GCAAGAGATGTGGAGTAATA+TGG	+	chr6.1:50597613-50597632	MS.gene86612:CDS	40.0%
	GTCTTCATTAATACTCCCTC+TGG	-	chr6.1:50597826-50597845	None:intergenic	40.0%
	TACCCCAAGCTATATGTGTA+GGG	-	chr6.1:50597649-50597668	None:intergenic	40.0%
	TGAAGACTTTCAAGATGAGG+AGG	+	chr6.1:50597839-50597858	MS.gene86612:intron	40.0%
	TGATGAACATGCAAGAGATG+TGG	+	chr6.1:50597603-50597622	MS.gene86612:CDS	40.0%
	TGCTTATATATGTGACCGGA+GGG	-	chr6.1:50597691-50597710	None:intergenic	40.0%
	TTGCTTATATATGTGACCGG+AGG	-	chr6.1:50597692-50597711	None:intergenic	40.0%
!	GGAGCAGAGTATGATTTGTA+TGG	+	chr6.1:50597565-50597584	MS.gene86612:CDS	40.0%
	AAAAGTTGAGACAGGCGTAG+CGG	-	chr6.1:50597379-50597398	None:intergenic	45.0%
	AATCATACTCTGCTCCTCAG+TGG	-	chr6.1:50597561-50597580	None:intergenic	45.0%
	ACCCCAAGCTATATGTGTAG+GGG	-	chr6.1:50597648-50597667	None:intergenic	45.0%
	ACTTGCCACTACTCAAGCAA+AGG	+	chr6.1:50597424-50597443	MS.gene86612:CDS	45.0%
	CTTGAGTAGTGGCAAGTTTG+GGG	-	chr6.1:50597421-50597440	None:intergenic	45.0%
	GCTTGAGTAGTGGCAAGTTT+GGG	-	chr6.1:50597422-50597441	None:intergenic	45.0%
	GGAGTCTGAAAAGTTGAGAC+AGG	-	chr6.1:50597387-50597406	None:intergenic	45.0%
	GTCCCCTACACATATAGCTT+GGG	+	chr6.1:50597643-50597662	MS.gene86612:CDS	45.0%
	TCCCCTACACATATAGCTTG+GGG	+	chr6.1:50597644-50597663	MS.gene86612:CDS	45.0%
	TGCAGGGAGGAAGAAATTCA+AGG	+	chr6.1:50597190-50597209	MS.gene86612:CDS	45.0%
	TGCTTGAGTAGTGGCAAGTT+TGG	-	chr6.1:50597423-50597442	None:intergenic	45.0%
	TGTCCCCTACACATATAGCT+TGG	+	chr6.1:50597642-50597661	MS.gene86612:CDS	45.0%
	TTCCTCACACCCCTATAAAC+CGG	-	chr6.1:50597227-50597246	None:intergenic	45.0%
!	TTTATAGGGGTGTGAGGAAG+AGG	+	chr6.1:50597228-50597247	MS.gene86612:CDS	45.0%
	ATGTTGCTGCAATGGCGTTG+AGG	+	chr6.1:50597351-50597370	MS.gene86612:CDS	50.0%
	CTTGTCTGGTCTGAAAGCCT+CGG	-	chr6.1:50597477-50597496	None:intergenic	50.0%
	TCCTCACACCCCTATAAACC+GGG	-	chr6.1:50597226-50597245	None:intergenic	50.0%
!	TCAACTTTTCAGACTCCGCG+TGG	+	chr6.1:50597390-50597409	MS.gene86612:CDS	50.0%
!	TGTTGCTGCAATGGCGTTGA+GGG	+	chr6.1:50597352-50597371	MS.gene86612:CDS	50.0%
	ACGCCATTGCAGCAACATCG+TGG	-	chr6.1:50597349-50597368	None:intergenic	55.0%
	ACTCGCCACCCGGTTTATAG+GGG	+	chr6.1:50597215-50597234	MS.gene86612:CDS	55.0%
	AGACTCGCCACCCGGTTTAT+AGG	+	chr6.1:50597213-50597232	MS.gene86612:CDS	55.0%
	ATTCAAGGAGACTCGCCACC+CGG	+	chr6.1:50597205-50597224	MS.gene86612:CDS	55.0%
	CGCCATTGCAGCAACATCGT+GGG	-	chr6.1:50597348-50597367	None:intergenic	55.0%
	GACTCGCCACCCGGTTTATA+GGG	+	chr6.1:50597214-50597233	MS.gene86612:CDS	55.0%
	GACTTTCCCAACTGCGGAGA+TGG	+	chr6.1:50597313-50597332	MS.gene86612:CDS	55.0%
	GCTAGGGACTTTCCCAACTG+CGG	+	chr6.1:50597307-50597326	MS.gene86612:CDS	55.0%
	TCACACCCCTATAAACCGGG+TGG	-	chr6.1:50597223-50597242	None:intergenic	55.0%
	TCCTCCCTGCACGCTTCTTT+GGG	-	chr6.1:50597181-50597200	None:intergenic	55.0%
	TGCCCACGATGTTGCTGCAA+TGG	+	chr6.1:50597343-50597362	MS.gene86612:CDS	55.0%
	TGTAGTTGCCACTGCCACTG+AGG	+	chr6.1:50597544-50597563	MS.gene86612:CDS	55.0%
	TTCCTCCCTGCACGCTTCTT+TGG	-	chr6.1:50597182-50597201	None:intergenic	55.0%
	TTGCAGCAACATCGTGGGCA+CGG	-	chr6.1:50597343-50597362	None:intergenic	55.0%
!	ACCCGGTTTATAGGGGTGTG+AGG	+	chr6.1:50597222-50597241	MS.gene86612:CDS	55.0%
!	ACTTTTCAGACTCCGCGTGG+CGG	+	chr6.1:50597393-50597412	MS.gene86612:CDS	55.0%
!	AGTACCCCAAAGAAGCGTGC+AGG	+	chr6.1:50597173-50597192	MS.gene86612:CDS	55.0%
!	GTACCCCAAAGAAGCGTGCA+GGG	+	chr6.1:50597174-50597193	MS.gene86612:CDS	55.0%
!	GTTGCTGCAATGGCGTTGAG+GGG	+	chr6.1:50597353-50597372	MS.gene86612:CDS	55.0%
	ACTCTGCTCCTCAGTGGCAG+TGG	-	chr6.1:50597555-50597574	None:intergenic	60.0%
	CCTCCCTGCACGCTTCTTTG+GGG	-	chr6.1:50597180-50597199	None:intergenic	60.0%
	GTCTGGTCTGAAAGCCTCGG+CGG	-	chr6.1:50597474-50597493	None:intergenic	60.0%
	TGCAGCAACATCGTGGGCAC+GGG	-	chr6.1:50597342-50597361	None:intergenic	60.0%
	AAGTTTGGGGAGCCGCCACG+CGG	-	chr6.1:50597408-50597427	None:intergenic	65.0%
	GAAAGCCTCGGCGGCTTCTG+TGG	-	chr6.1:50597465-50597484	None:intergenic	65.0%
	GGGCTGCCATCTCCGCAGTT+GGG	-	chr6.1:50597322-50597341	None:intergenic	65.0%
!	CCCCAAAGAAGCGTGCAGGG+AGG	+	chr6.1:50597177-50597196	MS.gene86612:CDS	65.0%
	CGGGCTGCCATCTCCGCAGT+TGG	-	chr6.1:50597323-50597342	None:intergenic	70.0%
	GGCAGCCACAGAAGCCGCCG+AGG	+	chr6.1:50597457-50597476	MS.gene86612:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.1	gene	50597158	50598078	50597158	ID=MS.gene86612
chr6.1	mRNA	50597158	50598078	50597158	ID=MS.gene86612.t1;Parent=MS.gene86612
chr6.1	exon	50597158	50597674	50597158	ID=MS.gene86612.t1.exon1;Parent=MS.gene86612.t1
chr6.1	CDS	50597158	50597674	50597158	ID=cds.MS.gene86612.t1;Parent=MS.gene86612.t1
chr6.1	exon	50598062	50598078	50598062	ID=MS.gene86612.t1.exon2;Parent=MS.gene86612.t1
chr6.1	CDS	50598062	50598078	50598062	ID=cds.MS.gene86612.t1;Parent=MS.gene86612.t1

Gene Sequence

>MS.gene86612

ATGCGATTAGCAGCAAGTACCCCAAAGAAGCGTGCAGGGAGGAAGAAATTCAAGGAGACTCGCCACCCGGTTTATAGGGGTGTGAGGAAGAGGAACTTAGATAAATGGGTGTGTGAAATGAGGGAGCCTAACAAGAAGACTAAGATTTGGCTAGGGACTTTCCCAACTGCGGAGATGGCAGCCCGTGCCCACGATGTTGCTGCAATGGCGTTGAGGGGCCGCTACGCCTGTCTCAACTTTTCAGACTCCGCGTGGCGGCTCCCCAAACTTGCCACTACTCAAGCAAAGGATATACAAAAGGCAGCCACAGAAGCCGCCGAGGCTTTCAGACCAGACAAGACTTTAATGACTAATCACAATGACAATGACAAAGATAATAACATGGCTGTAGTTGCCACTGCCACTGAGGAGCAGAGTATGATTTGTATGGAAGAGAAAGAAGAAGTGATGAACATGCAAGAGATGTGGAGTAATATGGCGCTAATGTCCCCTACACATATAGCTTGGGGTATTATGAGTATGAATATACTCCCTCCGGTCACATATATAAGCAAAAATCAACGTTTTAGGTTCATGGAATAATTAACGTATCTAGTCACATTTATAGACCAAATACATTAGTTATTCAATGAACCTAAAAAGTTGTGTTTTGCTTATAAATGTGACCAGAGGGAGTATTAATGAAGACTTTCAAGATGAGGAGGTTTCACTATGGAGTTTTTAATTTTTTTTGTAGGAAAATGGTTTTTTTTAGCTAGTTTGATTCGTTTGATTTACATTTATTTATTTTTGGATTGTAGAATGGAAATTGTCTGTAGTACAAACCTTTTTATTAGTAGTACGGATTCTTGATAGGTTGAAATTGGAAAGGAAATTCTTTTTGTATTCTTTTCTTTGAATGTAGTCACTAAAGAAGCATAA

Protein sequence

>MS.gene86612.t1

MRLAASTPKKRAGRKKFKETRHPVYRGVRKRNLDKWVCEMREPNKKTKIWLGTFPTAEMAARAHDVAAMALRGRYACLNFSDSAWRLPKLATTQAKDIQKAATEAAEAFRPDKTLMTNHNDNDKDNNMAVVATATEEQSMICMEEKEEVMNMQEMWSNMALMSPTHIAWGIMITKEA