AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62758

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62758.t1 MTR_6g465460 90.909 209 18 1 1 208 1 209 5.90e-127 359
MS.gene62758.t1 MTR_6g465450 83.886 211 31 2 1 208 1 211 2.50e-124 352
MS.gene62758.t1 MTR_6g465420 79.524 210 41 1 1 208 1 210 8.63e-117 333
MS.gene62758.t1 MTR_6g465430 81.429 210 37 2 1 208 1 210 8.49e-115 327
MS.gene62758.t1 MTR_6g465690 68.837 215 57 4 1 206 3 216 7.06e-96 280
MS.gene62758.t1 MTR_6g466000 62.273 220 61 4 6 214 19 227 5.72e-94 274
MS.gene62758.t1 MTR_6g465510 71.569 204 41 2 27 214 6 208 2.27e-92 269
MS.gene62758.t1 MTR_6g465530 70.769 195 48 4 27 214 6 198 9.72e-92 267
MS.gene62758.t1 MTR_6g466130 67.539 191 58 2 27 214 39 228 3.37e-83 247
MS.gene62758.t1 MTR_1g101600 57.000 200 79 3 18 214 5 200 4.25e-67 205
MS.gene62758.t1 MTR_6g465850 48.214 280 78 6 1 214 1 279 6.01e-66 205
MS.gene62758.t1 MTR_6g465990 50.909 220 66 5 6 214 5 193 1.80e-64 198
MS.gene62758.t1 MTR_6g466020 53.571 196 63 5 20 211 9 180 1.27e-57 180
MS.gene62758.t1 MTR_5g010940 43.913 230 108 6 1 214 3 227 2.44e-53 171
MS.gene62758.t1 MTR_5g010930 46.829 205 86 7 29 214 24 224 5.25e-52 167
MS.gene62758.t1 MTR_4g102660 52.294 218 84 9 14 214 4 218 4.16e-51 165
MS.gene62758.t1 MTR_5g010910 43.781 201 94 5 30 214 25 222 6.81e-48 157
MS.gene62758.t1 MTR_8g006410 58.242 91 38 0 38 128 36 126 5.17e-33 118
MS.gene62758.t1 MTR_3g110205 55.446 101 45 0 43 143 32 132 8.73e-33 117
MS.gene62758.t1 MTR_2g085015 42.690 171 88 4 6 172 5 169 1.04e-31 115
MS.gene62758.t1 MTR_7g046260 56.383 94 41 0 35 128 42 135 6.17e-31 113
MS.gene62758.t1 MTR_7g117690 52.336 107 44 2 22 128 3 102 6.62e-31 112
MS.gene62758.t1 MTR_5g012910 62.025 79 30 0 50 128 24 102 4.82e-30 110
MS.gene62758.t1 MTR_8g027465 51.402 107 45 3 26 128 13 116 6.54e-29 107
MS.gene62758.t1 MTR_8g013860 52.525 99 46 1 31 128 23 121 3.02e-28 105
MS.gene62758.t1 MTR_8g102800 50.833 120 56 2 24 142 8 125 5.87e-28 105
MS.gene62758.t1 MTR_2g101340 48.361 122 57 1 34 149 15 136 1.47e-27 104
MS.gene62758.t1 MTR_6g088405 60.256 78 31 0 51 128 41 118 3.00e-27 103
MS.gene62758.t1 MTR_4g100650 61.538 78 30 0 51 128 71 148 2.49e-26 102
MS.gene62758.t1 MTR_4g102670 55.696 79 34 1 50 128 11 88 9.77e-25 95.9
MS.gene62758.t1 MTR_4g035430 52.577 97 41 1 39 135 22 113 1.26e-24 97.1
MS.gene62758.t1 MTR_6g088425 50.000 122 50 2 24 135 10 130 1.91e-23 94.4
MS.gene62758.t1 MTR_1g006660 59.494 79 32 0 50 128 43 121 6.08e-21 88.2
MS.gene62758.t1 MTR_5g008590 35.593 177 96 3 54 213 11 186 1.00e-18 80.5
MS.gene62758.t1 MTR_1g060910 42.623 122 44 3 38 157 3 100 2.72e-18 79.0
MS.gene62758.t1 MTR_5g008550 50.000 86 43 0 54 139 21 106 4.47e-18 79.0
MS.gene62758.t1 MTR_2g435590 40.000 105 60 1 8 112 53 154 7.44e-18 79.7
MS.gene62758.t1 MTR_1g014780 41.053 95 49 1 53 140 37 131 9.94e-18 79.0
MS.gene62758.t1 MTR_5g008470 44.048 84 47 0 56 139 77 160 4.06e-17 76.3
MS.gene62758.t1 MTR_1g014820 42.391 92 49 1 53 140 26 117 5.85e-17 77.4
MS.gene62758.t1 MTR_3g105510 50.000 70 35 0 54 123 37 106 1.39e-16 75.9
MS.gene62758.t1 MTR_5g083340 62.069 58 22 0 54 111 85 142 1.64e-16 77.4
MS.gene62758.t1 MTR_3g074130 51.351 74 34 1 38 111 136 207 1.66e-16 77.0
MS.gene62758.t1 MTR_1g014860 38.384 99 54 1 49 140 17 115 2.31e-16 75.1
MS.gene62758.t1 MTR_3g102100 56.897 58 25 0 54 111 45 102 3.10e-16 73.6
MS.gene62758.t1 MTR_1g090170 53.968 63 29 0 49 111 147 209 4.55e-16 75.5
MS.gene62758.t1 MTR_7g021010 42.697 89 50 1 45 132 2 90 6.04e-16 72.0
MS.gene62758.t1 MTR_2g105380 37.383 107 55 2 3 109 78 172 7.72e-16 75.5
MS.gene62758.t1 MTR_1g090170 53.968 63 29 0 49 111 234 296 7.82e-16 75.5
MS.gene62758.t1 MTR_2g043050 43.529 85 48 0 53 137 18 102 7.84e-16 73.6
MS.gene62758.t1 MTR_5g062700 57.627 59 25 0 53 111 172 230 8.26e-16 75.5
MS.gene62758.t1 MTR_7g020980 38.532 109 64 3 7 113 3 110 1.01e-15 72.4
MS.gene62758.t1 MTR_8g090350 57.895 57 24 0 53 109 112 168 1.16e-15 74.3
MS.gene62758.t1 MTR_2g090235 57.627 59 25 0 53 111 217 275 1.31e-15 75.1
MS.gene62758.t1 MTR_1g087920 45.122 82 43 1 32 111 53 134 1.70e-15 73.9
MS.gene62758.t1 MTR_1g014800 41.111 90 46 1 53 135 30 119 1.75e-15 72.8
MS.gene62758.t1 MTR_1g019110 51.613 62 30 0 54 115 44 105 2.32e-15 71.6
MS.gene62758.t1 MTR_7g021010 33.858 127 83 1 7 132 3 129 2.35e-15 71.2
MS.gene62758.t1 MTR_1g028560 43.902 82 41 1 54 135 115 191 2.47e-15 73.9
MS.gene62758.t1 MTR_3g105480 50.000 68 34 0 56 123 33 100 3.67e-15 72.0
MS.gene62758.t1 MTR_2g043030 29.747 158 97 3 53 196 18 175 3.78e-15 71.2
MS.gene62758.t1 MTR_8g092460 53.333 60 28 0 54 113 145 204 5.95e-15 72.4
MS.gene62758.t1 MTR_5g083330 50.685 73 36 0 39 111 20 92 7.21e-15 72.0
MS.gene62758.t1 MTR_2g089170 60.714 56 22 0 54 109 65 120 7.35e-15 70.5
MS.gene62758.t1 MTR_1g101550 38.418 177 90 7 54 214 57 230 7.86e-15 71.2
MS.gene62758.t1 MTR_4g086220 58.929 56 23 0 54 109 96 151 8.25e-15 70.9
MS.gene62758.t1 MTR_3g053690 55.385 65 26 1 45 109 21 82 1.43e-14 70.1
MS.gene62758.t1 MTR_7g028925 53.333 60 25 1 53 112 28 84 1.80e-14 67.0
MS.gene62758.t1 MTR_5g016750 55.357 56 25 0 54 109 25 80 1.94e-14 68.9
MS.gene62758.t1 MTR_4g086160 57.143 56 24 0 54 109 96 151 2.12e-14 69.7
MS.gene62758.t1 MTR_2g078680 48.684 76 36 1 34 109 14 86 2.75e-14 68.9
MS.gene62758.t1 MTR_4g086190 57.143 56 24 0 54 109 96 151 2.78e-14 69.7
MS.gene62758.t1 MTR_0939s0010 58.929 56 23 0 54 109 65 120 2.82e-14 68.9
MS.gene62758.t1 MTR_8g022820 41.772 79 43 1 47 125 117 192 3.52e-14 70.9
MS.gene62758.t1 MTR_8g022820 41.772 79 43 1 47 125 117 192 3.52e-14 70.9
MS.gene62758.t1 MTR_4g086165 57.143 56 24 0 54 109 82 137 3.63e-14 68.9
MS.gene62758.t1 MTR_8g022820 41.772 79 43 1 47 125 116 191 3.65e-14 70.9
MS.gene62758.t1 MTR_5g082950 58.929 56 23 0 54 109 66 121 4.10e-14 70.1
MS.gene62758.t1 MTR_4g114570 50.725 69 27 1 54 122 7 68 4.65e-14 68.6
MS.gene62758.t1 MTR_1g048610 42.857 91 49 2 20 109 57 145 7.81e-14 68.2
MS.gene62758.t1 MTR_4g010640 55.357 56 25 0 54 109 7 62 8.69e-14 67.8
MS.gene62758.t1 MTR_7g092190 57.143 56 24 0 54 109 30 85 9.23e-14 68.9
MS.gene62758.t1 MTR_3g106290 58.929 56 23 0 54 109 8 63 1.13e-13 67.0
MS.gene62758.t1 MTR_4g078710 36.190 105 57 2 54 156 28 124 1.34e-13 67.4
MS.gene62758.t1 MTR_1g074310 51.613 62 29 1 54 114 21 82 1.34e-13 65.9
MS.gene62758.t1 MTR_5g009620 40.206 97 52 1 19 109 71 167 1.39e-13 68.6
MS.gene62758.t1 MTR_2g103700 51.667 60 29 0 54 113 7 66 1.46e-13 66.6
MS.gene62758.t1 MTR_4g008860 58.929 56 23 0 54 109 8 63 1.61e-13 67.0
MS.gene62758.t1 MTR_3g090760 31.892 185 106 5 28 207 96 265 1.78e-13 68.6
MS.gene62758.t1 MTR_2g438180 53.226 62 28 1 54 114 14 75 2.18e-13 65.1
MS.gene62758.t1 MTR_2g015050 54.386 57 25 1 54 109 134 190 4.83e-13 66.6
MS.gene62758.t1 MTR_1g070070 54.386 57 25 1 54 109 21 77 5.91e-13 64.3
MS.gene62758.t1 MTR_4g100450 42.353 85 48 1 30 113 130 214 5.94e-13 66.6
MS.gene62758.t1 MTR_8g099215 45.000 80 38 1 36 109 83 162 6.41e-13 66.6
MS.gene62758.t1 MTR_2g043040 40.000 85 51 0 53 137 18 102 7.15e-13 65.9
MS.gene62758.t1 MTR_2g014340 53.571 56 26 0 54 109 19 74 7.22e-13 65.1
MS.gene62758.t1 MTR_4g100420 52.239 67 29 2 48 113 153 217 1.11e-12 65.9
MS.gene62758.t1 MTR_1g074230 56.140 57 24 1 54 109 19 75 1.97e-12 62.8
MS.gene62758.t1 MTR_5g085100 40.816 98 47 3 23 119 17 104 2.97e-12 64.7
MS.gene62758.t1 MTR_2g014300 55.357 56 25 0 54 109 15 70 3.03e-12 62.8
MS.gene62758.t1 MTR_4g054360 48.529 68 34 1 47 113 117 184 3.47e-12 64.3
MS.gene62758.t1 MTR_8g069360 51.786 56 27 0 54 109 44 99 4.21e-12 64.7
MS.gene62758.t1 MTR_4g054740 33.088 136 65 4 6 140 68 178 5.06e-12 63.5
MS.gene62758.t1 MTR_2g019750 33.871 124 73 2 39 162 37 151 6.03e-12 63.9
MS.gene62758.t1 MTR_1g090290 51.613 62 27 2 49 109 110 169 6.54e-12 62.4
MS.gene62758.t1 MTR_3g072610 42.342 111 53 3 39 138 3 113 7.21e-12 62.8
MS.gene62758.t1 MTR_2g043020 50.877 57 28 0 53 109 18 74 8.56e-12 62.4
MS.gene62758.t1 MTR_5g008540 47.541 61 32 0 56 116 26 86 1.04e-11 59.7
MS.gene62758.t1 MTR_2g016730 50.847 59 29 0 51 109 20 78 1.08e-11 63.2
MS.gene62758.t1 MTR_5g032820 53.571 56 26 0 54 109 46 101 1.37e-11 63.2
MS.gene62758.t1 MTR_7g085810 44.595 74 40 1 54 127 30 102 1.38e-11 62.4
MS.gene62758.t1 MTR_4g088005 48.438 64 32 1 47 109 50 113 1.44e-11 60.1
MS.gene62758.t1 MTR_6g041970 39.535 86 39 1 54 139 18 90 1.62e-11 59.3
MS.gene62758.t1 MTR_4g111915 45.763 59 32 0 54 112 53 111 2.17e-11 59.7
MS.gene62758.t1 MTR_5g008790 39.080 87 48 2 54 135 18 104 2.79e-11 60.1
MS.gene62758.t1 MTR_5g085070 47.945 73 28 2 47 119 47 109 3.37e-11 61.6
MS.gene62758.t1 MTR_1g074250 49.180 61 29 1 51 109 16 76 4.06e-11 58.9
MS.gene62758.t1 MTR_4g112490 38.298 94 55 1 22 112 18 111 4.94e-11 60.1
MS.gene62758.t1 MTR_4g054860 43.662 71 39 1 46 115 123 193 5.18e-11 60.8
MS.gene62758.t1 MTR_5g075570 46.667 60 32 0 50 109 120 179 5.19e-11 61.2
MS.gene62758.t1 MTR_4g119270 44.444 72 37 1 38 109 40 108 6.38e-11 61.2
MS.gene62758.t1 MTR_8g032610 50.000 58 29 0 56 113 29 86 7.55e-11 60.8
MS.gene62758.t1 MTR_8g006840 50.877 57 27 1 54 109 125 181 7.64e-11 59.7
MS.gene62758.t1 MTR_3g095190 52.055 73 34 1 54 125 170 242 9.88e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62758.t1 AT4G25470 52.752 218 87 6 7 214 5 216 8.43e-65 199
MS.gene62758.t1 AT4G25480 53.456 217 87 6 7 214 5 216 7.19e-61 189
MS.gene62758.t1 AT5G51990 46.522 230 93 6 6 214 2 222 2.92e-57 181
MS.gene62758.t1 AT1G63030 47.619 189 88 3 27 214 3 181 5.10e-56 176
MS.gene62758.t1 AT1G63030 47.619 189 88 3 27 214 3 181 5.10e-56 176
MS.gene62758.t1 AT4G25490 52.511 219 86 7 7 214 2 213 5.21e-56 177
MS.gene62758.t1 AT1G12610 58.571 140 52 1 27 166 3 136 1.05e-55 176
MS.gene62758.t1 AT5G25810 50.806 124 54 1 12 135 1 117 6.11e-34 121
MS.gene62758.t1 AT5G11590 52.174 115 51 1 25 135 18 132 2.21e-31 115
MS.gene62758.t1 AT2G44940 60.215 93 37 0 43 135 89 181 3.15e-31 115
MS.gene62758.t1 AT4G32800 57.143 98 36 1 50 141 15 112 4.10e-31 114
MS.gene62758.t1 AT3G16280 63.291 79 29 0 50 128 57 135 9.41e-29 108
MS.gene62758.t1 AT3G16280 63.291 79 29 0 50 128 75 153 1.30e-28 108
MS.gene62758.t1 AT1G01250 60.000 80 32 0 49 128 40 119 1.74e-28 106
MS.gene62758.t1 AT2G35700 60.000 80 32 0 49 128 40 119 3.29e-28 105
MS.gene62758.t1 AT4G16750 56.790 81 35 0 49 129 35 115 5.55e-27 102
MS.gene62758.t1 AT3G60490 53.846 91 41 1 39 128 55 145 6.51e-26 101
MS.gene62758.t1 AT2G36450 40.113 177 90 6 50 214 11 183 3.12e-25 97.4
MS.gene62758.t1 AT2G25820 60.526 76 30 0 53 128 25 100 7.02e-25 97.8
MS.gene62758.t1 AT1G71450 57.317 82 35 0 53 134 23 104 2.97e-23 92.4
MS.gene62758.t1 AT5G52020 38.506 174 95 4 50 214 61 231 1.43e-22 92.0
MS.gene62758.t1 AT2G47520 44.762 105 52 2 10 112 8 108 1.82e-20 84.7
MS.gene62758.t1 AT1G33760 55.172 87 39 0 54 140 20 106 2.32e-19 82.4
MS.gene62758.t1 AT4G13620 51.282 78 37 1 35 111 212 289 5.79e-19 84.3
MS.gene62758.t1 AT1G77200 58.442 77 32 0 52 128 41 117 1.23e-18 81.6
MS.gene62758.t1 AT5G21960 38.211 123 68 1 52 166 5 127 7.93e-18 79.0
MS.gene62758.t1 AT1G22190 53.425 73 32 1 39 111 70 140 8.27e-18 79.7
MS.gene62758.t1 AT1G19210 31.492 181 97 5 54 214 12 185 9.76e-18 77.8
MS.gene62758.t1 AT1G21910 46.739 92 42 1 54 138 50 141 1.23e-17 78.6
MS.gene62758.t1 AT1G46768 57.143 63 26 1 49 111 27 88 1.45e-17 76.6
MS.gene62758.t1 AT1G46768 57.143 63 26 1 49 111 27 88 1.45e-17 76.6
MS.gene62758.t1 AT1G46768 57.143 63 26 1 49 111 27 88 1.50e-17 76.3
MS.gene62758.t1 AT4G39780 35.246 122 65 3 49 169 88 196 2.17e-17 78.6
MS.gene62758.t1 AT1G12630 60.811 74 28 1 50 123 15 87 4.84e-17 76.3
MS.gene62758.t1 AT2G22200 47.561 82 43 0 53 134 70 151 4.93e-17 77.8
MS.gene62758.t1 AT3G16770 51.282 78 31 1 34 111 66 136 5.29e-17 77.4
MS.gene62758.t1 AT4G06746 53.226 62 29 0 54 115 36 97 8.51e-17 74.7
MS.gene62758.t1 AT3G11020 58.730 63 26 0 51 113 75 137 9.23e-17 77.8
MS.gene62758.t1 AT1G74930 41.860 86 50 0 54 139 21 106 1.13e-16 75.5
MS.gene62758.t1 AT4G28140 33.553 152 76 5 36 181 120 252 3.69e-16 75.5
MS.gene62758.t1 AT1G78080 57.627 59 25 0 53 111 151 209 5.28e-16 75.5
MS.gene62758.t1 AT5G65130 45.455 99 40 3 28 113 73 170 6.65e-16 74.7
MS.gene62758.t1 AT5G65130 45.455 99 40 3 28 113 75 172 6.66e-16 74.7
MS.gene62758.t1 AT2G33710 48.101 79 36 1 49 122 65 143 9.43e-16 73.6
MS.gene62758.t1 AT2G20880 46.341 82 42 1 30 111 165 244 9.86e-16 75.1
MS.gene62758.t1 AT2G33710 48.101 79 36 1 49 122 65 143 1.51e-15 73.2
MS.gene62758.t1 AT3G50260 41.935 93 45 2 47 135 14 101 1.52e-15 71.2
MS.gene62758.t1 AT5G05410 59.322 59 24 0 54 112 79 137 2.43e-15 73.6
MS.gene62758.t1 AT1G22810 34.426 122 52 3 54 167 14 115 2.48e-15 70.5
MS.gene62758.t1 AT1G36060 59.649 57 23 0 53 109 142 198 2.69e-15 73.6
MS.gene62758.t1 AT1G71520 43.750 96 45 3 48 137 8 100 2.86e-15 70.5
MS.gene62758.t1 AT5G05410 59.322 59 24 0 54 112 79 137 3.48e-15 73.6
MS.gene62758.t1 AT4G36900 53.333 60 28 0 50 109 26 85 3.49e-15 71.2
MS.gene62758.t1 AT5G67190 51.724 58 28 0 54 111 21 78 7.60e-15 70.1
MS.gene62758.t1 AT2G23340 49.231 65 33 0 54 118 28 92 7.69e-15 70.1
MS.gene62758.t1 AT4G31060 36.508 126 74 4 54 174 27 151 9.20e-15 70.1
MS.gene62758.t1 AT5G47230 47.059 85 43 2 30 113 133 216 9.95e-15 71.6
MS.gene62758.t1 AT5G13330 51.562 64 29 1 50 113 37 98 1.81e-14 69.7
MS.gene62758.t1 AT5G07580 49.367 79 37 2 48 125 106 182 2.44e-14 69.3
MS.gene62758.t1 AT5G61890 51.562 64 29 1 50 113 88 149 2.64e-14 70.1
MS.gene62758.t1 AT1G15360 57.143 56 24 0 54 109 7 62 3.24e-14 68.9
MS.gene62758.t1 AT1G15360 57.143 56 24 0 54 109 7 62 3.24e-14 68.9
MS.gene62758.t1 AT5G44210 48.571 70 29 1 54 123 33 95 3.73e-14 68.6
MS.gene62758.t1 AT3G15210 55.556 63 25 1 47 109 21 80 4.81e-14 68.9
MS.gene62758.t1 AT1G75490 50.000 70 35 0 53 122 41 110 5.26e-14 68.6
MS.gene62758.t1 AT5G61600 59.016 61 22 2 50 109 86 144 5.75e-14 68.9
MS.gene62758.t1 AT4G17490 47.126 87 41 3 30 113 113 197 7.75e-14 68.9
MS.gene62758.t1 AT3G57600 55.357 56 25 0 54 109 28 83 8.93e-14 68.9
MS.gene62758.t1 AT4G11140 45.205 73 34 1 54 126 87 153 9.58e-14 68.9
MS.gene62758.t1 AT4G27950 54.386 57 26 0 54 110 118 174 1.27e-13 68.9
MS.gene62758.t1 AT1G72360 38.542 96 48 2 47 142 18 102 1.50e-13 67.4
MS.gene62758.t1 AT3G61630 44.872 78 37 1 54 131 105 176 1.50e-13 68.6
MS.gene62758.t1 AT5G51190 55.556 63 25 2 48 109 68 128 1.82e-13 67.4
MS.gene62758.t1 AT5G25390 53.571 56 26 0 54 109 7 62 2.25e-13 66.2
MS.gene62758.t1 AT5G43410 47.887 71 34 2 40 109 3 71 2.98e-13 64.7
MS.gene62758.t1 AT1G72360 35.000 120 67 2 23 142 43 151 3.93e-13 67.0
MS.gene62758.t1 AT1G72360 38.542 96 48 2 47 142 69 153 4.13e-13 67.0
MS.gene62758.t1 AT5G53290 43.836 73 41 0 38 110 109 181 6.42e-13 67.0
MS.gene62758.t1 AT5G25190 57.143 56 24 0 54 109 8 63 6.90e-13 64.7
MS.gene62758.t1 AT3G23230 50.000 62 30 1 54 114 20 81 9.23e-13 63.5
MS.gene62758.t1 AT1G12890 44.872 78 40 1 32 109 2 76 1.02e-12 65.1
MS.gene62758.t1 AT5G18450 56.140 57 25 0 53 109 33 89 1.32e-12 65.9
MS.gene62758.t1 AT2G40340 53.571 56 26 0 54 109 14 69 2.21e-12 65.1
MS.gene62758.t1 AT2G40340 53.571 56 26 0 54 109 14 69 2.21e-12 65.1
MS.gene62758.t1 AT2G40340 53.571 56 26 0 54 109 14 69 2.21e-12 65.1
MS.gene62758.t1 AT3G20310 52.459 61 29 0 49 109 22 82 2.38e-12 64.3
MS.gene62758.t1 AT1G03800 47.059 68 33 1 42 109 44 108 2.38e-12 64.3
MS.gene62758.t1 AT2G40340 51.724 58 28 0 54 111 72 129 3.93e-12 64.3
MS.gene62758.t1 AT2G40340 53.571 56 26 0 54 109 72 127 4.56e-12 64.7
MS.gene62758.t1 AT2G40340 53.571 56 26 0 54 109 79 134 5.00e-12 64.3
MS.gene62758.t1 AT1G28360 51.667 60 29 0 54 113 12 71 6.30e-12 62.4
MS.gene62758.t1 AT1G28370 51.786 56 27 0 54 109 20 75 7.01e-12 62.0
MS.gene62758.t1 AT2G46310 50.000 56 28 0 54 109 99 154 7.80e-12 63.5
MS.gene62758.t1 AT1G28370 51.786 56 27 0 54 109 58 113 9.66e-12 62.0
MS.gene62758.t1 AT5G19790 51.724 58 28 0 54 111 22 79 9.76e-12 62.8
MS.gene62758.t1 AT5G47220 52.632 57 26 1 54 109 117 173 1.88e-11 62.0
MS.gene62758.t1 AT4G23750 49.123 57 29 0 54 110 122 178 2.01e-11 62.8
MS.gene62758.t1 AT4G23750 49.123 57 29 0 54 110 122 178 2.01e-11 62.8
MS.gene62758.t1 AT1G24590 47.143 70 32 1 54 123 58 122 2.48e-11 62.4
MS.gene62758.t1 AT5G64750 42.857 70 39 1 64 133 195 263 2.66e-11 62.4
MS.gene62758.t1 AT1G77640 45.556 90 43 1 54 137 43 132 2.87e-11 61.6
MS.gene62758.t1 AT1G50640 52.381 63 27 1 47 109 24 83 3.06e-11 61.2
MS.gene62758.t1 AT1G12980 53.571 56 26 0 54 109 57 112 3.48e-11 62.0
MS.gene62758.t1 AT5G13910 44.595 74 37 1 54 127 20 89 3.61e-11 60.8
MS.gene62758.t1 AT5G18560 45.070 71 38 1 39 109 41 110 5.09e-11 61.6

Find 62 sgRNAs with CRISPR-Local

Find 69 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTCCCTGCTCTCTTCTT+TGG 0.152294 6.2:-59073086 None:intergenic
TCCTCCCTGCTCTCTTCTTT+GGG 0.261143 6.2:-59073085 None:intergenic
ATGGGCTCGGGCTGCCATAT+CGG 0.344047 6.2:-59073234 None:intergenic
TTCCTACAATAACTCATTGC+CGG 0.345900 6.2:+59073034 MS.gene62758:CDS
CAATAACTCATTGCCGGATT+CGG 0.382010 6.2:+59073040 MS.gene62758:CDS
GTCTGAGTTATGGAGGAATA+TGG 0.388348 6.2:+59073502 MS.gene62758:CDS
AAAGATATTCAGCTCCTTTG+TGG 0.404977 6.2:-59073447 None:intergenic
CAAATCCTAGTCTTTGTGTT+GGG 0.412460 6.2:-59073191 None:intergenic
ATCGAGGAAGTTGCTGGAAT+AGG 0.421748 6.2:-59073326 None:intergenic
GGAAGAGGAACTTAGACAAA+TGG 0.425545 6.2:+59073150 MS.gene62758:CDS
TATCGGTAATCATTATAGTA+TGG 0.428882 6.2:-59073400 None:intergenic
TCGCAGCAACATCATGGGCT+CGG 0.436627 6.2:-59073247 None:intergenic
TGAGGAAATGAAGTGTGAAT+AGG 0.445511 6.2:-59073000 None:intergenic
CCAACACAAAGACTAGGATT+TGG 0.458340 6.2:+59073192 MS.gene62758:CDS
CGCAGCAACATCATGGGCTC+GGG 0.465778 6.2:-59073246 None:intergenic
CGGGCTGCCATATCGGCTGT+TGG 0.466848 6.2:-59073227 None:intergenic
TGTTAGATATGTCTGAGTTA+TGG 0.479559 6.2:+59073492 MS.gene62758:CDS
AGCTACAACAGTCTCAATAT+CGG 0.484335 6.2:-59073417 None:intergenic
ACTCGCCACCCGGTGTATAG+AGG 0.498536 6.2:+59073122 MS.gene62758:CDS
ATGCCATCGCAGCAACATCA+TGG 0.500564 6.2:-59073253 None:intergenic
TGTTGCTGCGATGGCATTGA+GGG 0.505227 6.2:+59073259 MS.gene62758:CDS
AGTAACCCAAAGAAGAGAGC+AGG 0.505388 6.2:+59073080 MS.gene62758:CDS
ATGGTCTGGTCTAAAAGCTT+CGG 0.507769 6.2:-59073381 None:intergenic
CTCGATAAAAGATATTCAAA+AGG 0.509288 6.2:+59073343 MS.gene62758:CDS
AAGATGATGAGGTATCACTA+TGG 0.509514 6.2:+59073591 MS.gene62758:CDS
GTAATCATTATAGTATGGTC+TGG 0.512732 6.2:-59073395 None:intergenic
GCTAATCGTATCTCCGAATC+CGG 0.516421 6.2:-59073053 None:intergenic
CTGTCTCAATTTCGCAGACT+CGG 0.516981 6.2:+59073292 MS.gene62758:CDS
AGCCCATGATGTTGCTGCGA+TGG 0.523213 6.2:+59073250 MS.gene62758:CDS
GAAGAGGAACTTAGACAAAT+GGG 0.523345 6.2:+59073151 MS.gene62758:CDS
CCAAATCCTAGTCTTTGTGT+TGG 0.525041 6.2:-59073192 None:intergenic
AGCTATGCGTAGGGGACATG+AGG 0.541907 6.2:-59073526 None:intergenic
TGTATAGAGGTGTTAGGAAG+AGG 0.541975 6.2:+59073135 MS.gene62758:CDS
ACCCGGTGTATAGAGGTGTT+AGG 0.542359 6.2:+59073129 MS.gene62758:CDS
ATCCGGCAATGAGTTATTGT+AGG 0.542682 6.2:-59073036 None:intergenic
GTCTGGTCTAAAAGCTTCGG+CGG 0.563548 6.2:-59073378 None:intergenic
CATTTGAAAAGCTATGCGTA+GGG 0.563774 6.2:-59073535 None:intergenic
TGCCATCGCAGCAACATCAT+GGG 0.566903 6.2:-59073252 None:intergenic
ATGTTGCTGCGATGGCATTG+AGG 0.567345 6.2:+59073258 MS.gene62758:CDS
CGAAATTGAGACAGGCGTAT+CGG 0.569677 6.2:-59073283 None:intergenic
AGCAGGGAGGAAGATATTCA+AGG 0.572499 6.2:+59073097 MS.gene62758:CDS
CAAATGGGTGTGTGAAATGA+GGG 0.573881 6.2:+59073166 MS.gene62758:CDS
TCATTTGAAAAGCTATGCGT+AGG 0.578972 6.2:-59073536 None:intergenic
CGAGTCTGCGAAATTGAGAC+AGG 0.581266 6.2:-59073291 None:intergenic
ACAAATGGGTGTGTGAAATG+AGG 0.584388 6.2:+59073165 MS.gene62758:CDS
TCCTAACACCTCTATACACC+GGG 0.586398 6.2:-59073130 None:intergenic
TAGATATGTCTGAGTTATGG+AGG 0.591363 6.2:+59073495 MS.gene62758:CDS
GTAGGAAGAAGATGCTTCTG+AGG 0.593468 6.2:-59073018 None:intergenic
TTCCTAACACCTCTATACAC+CGG 0.602821 6.2:-59073131 None:intergenic
ACAAAGACTAGGATTTGGCT+AGG 0.603777 6.2:+59073197 MS.gene62758:CDS
ATTCAAGGAAACTCGCCACC+CGG 0.604485 6.2:+59073112 MS.gene62758:CDS
GTAACCCAAAGAAGAGAGCA+GGG 0.609180 6.2:+59073081 MS.gene62758:CDS
AGGAAGTTGCTGGAATAGGA+AGG 0.611487 6.2:-59073322 None:intergenic
GGGAGCCCAACACAAAGACT+AGG 0.634407 6.2:+59073186 MS.gene62758:CDS
GCTATGCGTAGGGGACATGA+GGG 0.637803 6.2:-59073525 None:intergenic
TCAATTTCGCAGACTCGGTG+TGG 0.646164 6.2:+59073297 MS.gene62758:CDS
GTTGCTGCGATGGCATTGAG+GGG 0.653514 6.2:+59073260 MS.gene62758:CDS
TGTAGCTGTCGTCGCCACAA+AGG 0.664697 6.2:+59073433 MS.gene62758:CDS
ATTTGAAAAGCTATGCGTAG+GGG 0.700287 6.2:-59073534 None:intergenic
GGATTCGGAGATACGATTAG+CGG 0.702620 6.2:+59073055 MS.gene62758:CDS
ACCCAAAGAAGAGAGCAGGG+AGG 0.745159 6.2:+59073084 MS.gene62758:CDS
TAACACCTCTATACACCGGG+TGG 0.755465 6.2:-59073127 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! CTCGATAAAAGATATTCAAA+AGG + chr6.2:59073343-59073362 MS.gene62758:CDS 25.0%
! TATCGGTAATCATTATAGTA+TGG - chr6.2:59073403-59073422 None:intergenic 25.0%
!! CTTTTGAATATCTTTTATCG+AGG - chr6.2:59073345-59073364 None:intergenic 25.0%
GTAATCATTATAGTATGGTC+TGG - chr6.2:59073398-59073417 None:intergenic 30.0%
TGTTAGATATGTCTGAGTTA+TGG + chr6.2:59073492-59073511 MS.gene62758:CDS 30.0%
!! ACAAGATTTTCAAGATGATG+AGG + chr6.2:59073580-59073599 MS.gene62758:CDS 30.0%
AAAGATATTCAGCTCCTTTG+TGG - chr6.2:59073450-59073469 None:intergenic 35.0%
AGCTACAACAGTCTCAATAT+CGG - chr6.2:59073420-59073439 None:intergenic 35.0%
ATTTGAAAAGCTATGCGTAG+GGG - chr6.2:59073537-59073556 None:intergenic 35.0%
CATTTGAAAAGCTATGCGTA+GGG - chr6.2:59073538-59073557 None:intergenic 35.0%
GAAGAGGAACTTAGACAAAT+GGG + chr6.2:59073151-59073170 MS.gene62758:CDS 35.0%
TAGATATGTCTGAGTTATGG+AGG + chr6.2:59073495-59073514 MS.gene62758:CDS 35.0%
TCATTTGAAAAGCTATGCGT+AGG - chr6.2:59073539-59073558 None:intergenic 35.0%
TGAGGAAATGAAGTGTGAAT+AGG - chr6.2:59073003-59073022 None:intergenic 35.0%
TTCCTACAATAACTCATTGC+CGG + chr6.2:59073034-59073053 MS.gene62758:CDS 35.0%
! AAGATGATGAGGTATCACTA+TGG + chr6.2:59073591-59073610 MS.gene62758:CDS 35.0%
! AAGGAGCTGAATATCTTTTG+TGG + chr6.2:59073452-59073471 MS.gene62758:CDS 35.0%
! AGGAGCTGAATATCTTTTGT+GGG + chr6.2:59073453-59073472 MS.gene62758:CDS 35.0%
! CAAATCCTAGTCTTTGTGTT+GGG - chr6.2:59073194-59073213 None:intergenic 35.0%
ACAAAGACTAGGATTTGGCT+AGG + chr6.2:59073197-59073216 MS.gene62758:CDS 40.0%
ACAAATGGGTGTGTGAAATG+AGG + chr6.2:59073165-59073184 MS.gene62758:CDS 40.0%
ATCCGGCAATGAGTTATTGT+AGG - chr6.2:59073039-59073058 None:intergenic 40.0%
ATGGTCTGGTCTAAAAGCTT+CGG - chr6.2:59073384-59073403 None:intergenic 40.0%
CAAATGGGTGTGTGAAATGA+GGG + chr6.2:59073166-59073185 MS.gene62758:CDS 40.0%
CAATAACTCATTGCCGGATT+CGG + chr6.2:59073040-59073059 MS.gene62758:CDS 40.0%
CCAACACAAAGACTAGGATT+TGG + chr6.2:59073192-59073211 MS.gene62758:CDS 40.0%
GGAAGAGGAACTTAGACAAA+TGG + chr6.2:59073150-59073169 MS.gene62758:CDS 40.0%
GTCTGAGTTATGGAGGAATA+TGG + chr6.2:59073502-59073521 MS.gene62758:CDS 40.0%
TTCCTAACACCTCTATACAC+CGG - chr6.2:59073134-59073153 None:intergenic 40.0%
! AACTTTTCCAACAGCCGATA+TGG + chr6.2:59073220-59073239 MS.gene62758:CDS 40.0%
! CCAAATCCTAGTCTTTGTGT+TGG - chr6.2:59073195-59073214 None:intergenic 40.0%
! GGAGCTGAATATCTTTTGTG+GGG + chr6.2:59073454-59073473 MS.gene62758:CDS 40.0%
! TCTTTTATCGAGGAAGTTGC+TGG - chr6.2:59073335-59073354 None:intergenic 40.0%
!! TGTATAGAGGTGTTAGGAAG+AGG + chr6.2:59073135-59073154 MS.gene62758:CDS 40.0%
AGCAGGGAGGAAGATATTCA+AGG + chr6.2:59073097-59073116 MS.gene62758:CDS 45.0%
AGGAAGTTGCTGGAATAGGA+AGG - chr6.2:59073325-59073344 None:intergenic 45.0%
AGTAACCCAAAGAAGAGAGC+AGG + chr6.2:59073080-59073099 MS.gene62758:CDS 45.0%
ATCGAGGAAGTTGCTGGAAT+AGG - chr6.2:59073329-59073348 None:intergenic 45.0%
CGAAATTGAGACAGGCGTAT+CGG - chr6.2:59073286-59073305 None:intergenic 45.0%
CTGTCTCAATTTCGCAGACT+CGG + chr6.2:59073292-59073311 MS.gene62758:CDS 45.0%
GCTAATCGTATCTCCGAATC+CGG - chr6.2:59073056-59073075 None:intergenic 45.0%
GGATTCGGAGATACGATTAG+CGG + chr6.2:59073055-59073074 MS.gene62758:CDS 45.0%
GTAACCCAAAGAAGAGAGCA+GGG + chr6.2:59073081-59073100 MS.gene62758:CDS 45.0%
GTAGGAAGAAGATGCTTCTG+AGG - chr6.2:59073021-59073040 None:intergenic 45.0%
TCCTAACACCTCTATACACC+GGG - chr6.2:59073133-59073152 None:intergenic 45.0%
ATGCCATCGCAGCAACATCA+TGG - chr6.2:59073256-59073275 None:intergenic 50.0%
ATGTTGCTGCGATGGCATTG+AGG + chr6.2:59073258-59073277 MS.gene62758:CDS 50.0%
ATTCAAGGAAACTCGCCACC+CGG + chr6.2:59073112-59073131 MS.gene62758:CDS 50.0%
CGAGTCTGCGAAATTGAGAC+AGG - chr6.2:59073294-59073313 None:intergenic 50.0%
GTCTGGTCTAAAAGCTTCGG+CGG - chr6.2:59073381-59073400 None:intergenic 50.0%
TAACACCTCTATACACCGGG+TGG - chr6.2:59073130-59073149 None:intergenic 50.0%
TCCTCCCTGCTCTCTTCTTT+GGG - chr6.2:59073088-59073107 None:intergenic 50.0%
TGCCATCGCAGCAACATCAT+GGG - chr6.2:59073255-59073274 None:intergenic 50.0%
TTCCTCCCTGCTCTCTTCTT+TGG - chr6.2:59073089-59073108 None:intergenic 50.0%
! TGTTGCTGCGATGGCATTGA+GGG + chr6.2:59073259-59073278 MS.gene62758:CDS 50.0%
!! ACCCGGTGTATAGAGGTGTT+AGG + chr6.2:59073129-59073148 MS.gene62758:CDS 50.0%
!! TCAATTTCGCAGACTCGGTG+TGG + chr6.2:59073297-59073316 MS.gene62758:CDS 50.0%
ACCCAAAGAAGAGAGCAGGG+AGG + chr6.2:59073084-59073103 MS.gene62758:CDS 55.0%
AGCCCATGATGTTGCTGCGA+TGG + chr6.2:59073250-59073269 MS.gene62758:CDS 55.0%
AGCTATGCGTAGGGGACATG+AGG - chr6.2:59073529-59073548 None:intergenic 55.0%
GCTATGCGTAGGGGACATGA+GGG - chr6.2:59073528-59073547 None:intergenic 55.0%
GGGAGCCCAACACAAAGACT+AGG + chr6.2:59073186-59073205 MS.gene62758:CDS 55.0%
TCGCAGCAACATCATGGGCT+CGG - chr6.2:59073250-59073269 None:intergenic 55.0%
TGTAGCTGTCGTCGCCACAA+AGG + chr6.2:59073433-59073452 MS.gene62758:CDS 55.0%
! GTTGCTGCGATGGCATTGAG+GGG + chr6.2:59073260-59073279 MS.gene62758:CDS 55.0%
ACTCGCCACCCGGTGTATAG+AGG + chr6.2:59073122-59073141 MS.gene62758:CDS 60.0%
ATGGGCTCGGGCTGCCATAT+CGG - chr6.2:59073237-59073256 None:intergenic 60.0%
CGCAGCAACATCATGGGCTC+GGG - chr6.2:59073249-59073268 None:intergenic 60.0%
! CGGGCTGCCATATCGGCTGT+TGG - chr6.2:59073230-59073249 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 59072978 59073622 59072978 ID=MS.gene62758
chr6.2 mRNA 59072978 59073622 59072978 ID=MS.gene62758.t1;Parent=MS.gene62758
chr6.2 exon 59072978 59073622 59072978 ID=MS.gene62758.t1.exon1;Parent=MS.gene62758.t1
chr6.2 CDS 59072978 59073622 59072978 ID=cds.MS.gene62758.t1;Parent=MS.gene62758.t1
Gene Sequence

>MS.gene62758

ATGTTTACTACTAACAACTCTTCCTATTCACACTTCATTTCCTCAGAAGCATCTTCTTCCTACAATAACTCATTGCCGGATTCGGAGATACGATTAGCGGCTAGTAACCCAAAGAAGAGAGCAGGGAGGAAGATATTCAAGGAAACTCGCCACCCGGTGTATAGAGGTGTTAGGAAGAGGAACTTAGACAAATGGGTGTGTGAAATGAGGGAGCCCAACACAAAGACTAGGATTTGGCTAGGAACTTTTCCAACAGCCGATATGGCAGCCCGAGCCCATGATGTTGCTGCGATGGCATTGAGGGGCCGATACGCCTGTCTCAATTTCGCAGACTCGGTGTGGCGCCTTCCTATTCCAGCAACTTCCTCGATAAAAGATATTCAAAAGGCAGCAACAAAAGCCGCCGAAGCTTTTAGACCAGACCATACTATAATGATTACCGATATTGAGACTGTTGTAGCTGTCGTCGCCACAAAGGAGCTGAATATCTTTTGTGGGGAAGAAGAGCATGAAATGTTAGATATGTCTGAGTTATGGAGGAATATGGCCCTCATGTCCCCTACGCATAGCTTTTCAAATGATCATTATGAAGATATTCAAGCACAAGATTTTCAAGATGATGAGGTATCACTATGGAACTATTAA
Protein sequence

>MS.gene62758.t1

MFTTNNSSYSHFISSEASSSYNNSLPDSEIRLAASNPKKRAGRKIFKETRHPVYRGVRKRNLDKWVCEMREPNTKTRIWLGTFPTADMAARAHDVAAMALRGRYACLNFADSVWRLPIPATSSIKDIQKAATKAAEAFRPDHTIMITDIETVVAVVATKELNIFCGEEEHEMLDMSELWRNMALMSPTHSFSNDHYEDIQAQDFQDDEVSLWNY