AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62760


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62760.t1 MTR_6g465420 89.513 267 28 0 1 267 1 267 2.76e-171 473
MS.gene62760.t1 MTR_6g465460 82.528 269 42 3 1 266 1 267 1.69e-155 434
MS.gene62760.t1 MTR_6g465450 86.531 245 32 1 1 244 1 245 5.04e-155 431
MS.gene62760.t1 MTR_6g465430 86.364 242 31 2 1 241 1 241 9.55e-147 410
MS.gene62760.t1 MTR_6g465690 65.476 252 64 5 4 242 5 246 8.33e-104 302
MS.gene62760.t1 MTR_6g465530 76.042 192 39 3 24 210 3 192 4.73e-94 275
MS.gene62760.t1 MTR_6g465510 76.768 198 31 2 27 210 6 202 4.36e-93 273
MS.gene62760.t1 MTR_6g466000 70.769 195 43 4 27 210 30 221 1.03e-92 273
MS.gene62760.t1 MTR_6g466130 72.432 185 49 2 27 210 39 222 1.04e-82 248
MS.gene62760.t1 MTR_1g101600 59.259 189 72 2 22 210 9 192 4.50e-66 204
MS.gene62760.t1 MTR_6g465850 51.653 242 61 4 24 210 33 273 2.67e-65 205
MS.gene62760.t1 MTR_6g465990 57.949 195 48 5 27 210 16 187 6.13e-63 196
MS.gene62760.t1 MTR_6g466020 55.495 182 59 4 29 210 18 177 2.35e-57 181
MS.gene62760.t1 MTR_5g010930 57.143 147 56 2 29 168 24 170 4.64e-52 169
MS.gene62760.t1 MTR_4g102660 57.527 186 63 8 24 196 14 196 3.30e-51 167
MS.gene62760.t1 MTR_5g010940 61.594 138 44 2 10 138 7 144 5.11e-51 167
MS.gene62760.t1 MTR_5g010910 65.517 116 33 2 30 138 24 139 3.06e-48 159
MS.gene62760.t1 MTR_3g110205 58.416 101 42 0 43 143 32 132 3.52e-34 122
MS.gene62760.t1 MTR_8g006410 58.242 91 38 0 38 128 36 126 9.57e-32 116
MS.gene62760.t1 MTR_2g085015 50.735 136 59 3 2 135 1 130 7.14e-31 115
MS.gene62760.t1 MTR_7g117690 57.143 91 33 1 38 128 18 102 9.85e-31 113
MS.gene62760.t1 MTR_5g012910 63.291 79 29 0 50 128 24 102 3.12e-30 112
MS.gene62760.t1 MTR_8g027465 52.294 109 45 3 24 128 11 116 1.52e-29 110
MS.gene62760.t1 MTR_7g046260 55.319 94 42 0 35 128 42 135 2.31e-29 111
MS.gene62760.t1 MTR_8g102800 57.692 104 42 1 38 141 23 124 9.27e-29 109
MS.gene62760.t1 MTR_2g101340 39.655 174 93 2 21 188 8 175 9.48e-29 108
MS.gene62760.t1 MTR_8g013860 63.291 79 29 0 50 128 43 121 1.00e-28 108
MS.gene62760.t1 MTR_6g088405 61.538 78 30 0 51 128 41 118 1.10e-26 103
MS.gene62760.t1 MTR_4g100650 62.821 78 29 0 51 128 71 148 1.71e-26 104
MS.gene62760.t1 MTR_4g102670 59.494 79 31 1 50 128 11 88 6.70e-26 100
MS.gene62760.t1 MTR_6g088425 50.388 129 53 2 17 135 3 130 3.79e-24 97.4
MS.gene62760.t1 MTR_4g035430 52.577 97 41 1 39 135 22 113 1.11e-23 95.9
MS.gene62760.t1 MTR_5g008590 39.286 168 83 3 54 202 11 178 4.78e-22 90.9
MS.gene62760.t1 MTR_1g006660 60.759 79 31 0 50 128 43 121 2.19e-20 87.8
MS.gene62760.t1 MTR_5g008550 35.028 177 96 5 54 217 21 191 3.26e-20 85.9
MS.gene62760.t1 MTR_5g008470 39.048 105 64 0 56 160 77 181 1.40e-18 81.3
MS.gene62760.t1 MTR_1g060910 36.628 172 65 7 38 189 3 150 1.49e-18 80.9
MS.gene62760.t1 MTR_1g014780 42.105 95 48 1 53 140 37 131 1.19e-17 80.1
MS.gene62760.t1 MTR_1g014820 44.565 92 47 1 53 140 26 117 5.15e-17 79.0
MS.gene62760.t1 MTR_3g102100 60.714 56 22 0 54 109 45 100 5.19e-17 77.0
MS.gene62760.t1 MTR_1g019110 37.374 99 59 1 54 152 44 139 2.83e-16 75.1
MS.gene62760.t1 MTR_2g435590 53.030 66 31 0 47 112 89 154 2.87e-16 76.6
MS.gene62760.t1 MTR_1g014860 39.394 99 53 1 49 140 17 115 2.96e-16 75.9
MS.gene62760.t1 MTR_3g074130 52.778 72 32 1 38 109 136 205 7.66e-16 76.6
MS.gene62760.t1 MTR_3g105510 50.000 70 35 0 54 123 37 106 8.50e-16 75.1
MS.gene62760.t1 MTR_5g083340 60.345 58 23 0 54 111 85 142 1.01e-15 76.6
MS.gene62760.t1 MTR_1g101550 43.262 141 70 3 54 185 57 196 1.04e-15 74.7
MS.gene62760.t1 MTR_1g090170 55.738 61 27 0 49 109 147 207 1.50e-15 75.5
MS.gene62760.t1 MTR_1g014800 42.222 90 45 1 53 135 30 119 2.34e-15 73.6
MS.gene62760.t1 MTR_1g090170 53.968 63 29 0 49 111 234 296 2.59e-15 75.5
MS.gene62760.t1 MTR_1g087920 39.450 109 61 3 7 111 27 134 3.09e-15 74.3
MS.gene62760.t1 MTR_5g016750 57.143 56 24 0 54 109 25 80 3.46e-15 72.0
MS.gene62760.t1 MTR_5g062700 57.627 59 25 0 53 111 172 230 3.92e-15 74.7
MS.gene62760.t1 MTR_2g043030 41.758 91 53 0 53 143 18 108 4.16e-15 72.4
MS.gene62760.t1 MTR_8g090350 57.895 57 24 0 53 109 112 168 5.60e-15 73.6
MS.gene62760.t1 MTR_2g105380 48.529 68 35 0 42 109 105 172 7.50e-15 73.9
MS.gene62760.t1 MTR_2g090235 57.627 59 25 0 53 111 217 275 7.72e-15 73.9
MS.gene62760.t1 MTR_7g021010 42.697 89 50 1 45 132 2 90 9.32e-15 69.7
MS.gene62760.t1 MTR_2g043050 42.353 85 49 0 53 137 18 102 1.29e-14 71.2
MS.gene62760.t1 MTR_1g028560 56.140 57 25 0 54 110 115 171 1.46e-14 72.8
MS.gene62760.t1 MTR_7g028925 55.000 60 24 1 53 112 28 84 1.56e-14 68.2
MS.gene62760.t1 MTR_7g020980 41.975 81 47 0 50 130 47 127 1.80e-14 70.1
MS.gene62760.t1 MTR_3g105480 50.000 68 34 0 56 123 33 100 2.00e-14 70.9
MS.gene62760.t1 MTR_4g086220 58.929 56 23 0 54 109 96 151 2.92e-14 70.5
MS.gene62760.t1 MTR_7g021010 42.697 89 50 1 45 132 41 129 3.72e-14 69.3
MS.gene62760.t1 MTR_5g083330 49.315 73 37 0 39 111 20 92 4.47e-14 70.9
MS.gene62760.t1 MTR_2g089170 58.929 56 23 0 54 109 65 120 6.39e-14 68.9
MS.gene62760.t1 MTR_4g086190 57.143 56 24 0 54 109 96 151 9.20e-14 69.3
MS.gene62760.t1 MTR_8g022820 43.038 79 42 1 47 125 116 191 9.69e-14 70.9
MS.gene62760.t1 MTR_4g086160 57.143 56 24 0 54 109 96 151 9.87e-14 69.3
MS.gene62760.t1 MTR_8g022820 43.038 79 42 1 47 125 117 192 1.01e-13 70.5
MS.gene62760.t1 MTR_8g022820 43.038 79 42 1 47 125 117 192 1.01e-13 70.5
MS.gene62760.t1 MTR_3g053690 55.385 65 26 1 45 109 21 82 1.22e-13 68.9
MS.gene62760.t1 MTR_4g086165 57.143 56 24 0 54 109 82 137 1.24e-13 68.6
MS.gene62760.t1 MTR_8g092460 51.667 60 29 0 54 113 145 204 1.34e-13 69.7
MS.gene62760.t1 MTR_5g082950 58.929 56 23 0 54 109 66 121 1.39e-13 70.1
MS.gene62760.t1 MTR_0939s0010 57.143 56 24 0 54 109 65 120 1.50e-13 68.2
MS.gene62760.t1 MTR_2g014300 58.929 56 23 0 54 109 15 70 1.51e-13 67.4
MS.gene62760.t1 MTR_2g078680 46.250 80 40 1 34 113 14 90 1.96e-13 67.8
MS.gene62760.t1 MTR_4g114570 55.357 56 25 0 54 109 7 62 2.07e-13 67.8
MS.gene62760.t1 MTR_2g043040 40.000 90 54 0 53 142 18 107 2.42e-13 68.2
MS.gene62760.t1 MTR_4g010640 55.357 56 25 0 54 109 7 62 2.89e-13 67.4
MS.gene62760.t1 MTR_3g106290 58.929 56 23 0 54 109 8 63 3.21e-13 67.0
MS.gene62760.t1 MTR_7g092190 57.143 56 24 0 54 109 30 85 3.42e-13 68.6
MS.gene62760.t1 MTR_4g008860 58.929 56 23 0 54 109 8 63 4.85e-13 66.6
MS.gene62760.t1 MTR_1g074310 56.140 57 24 1 54 109 21 77 5.44e-13 65.1
MS.gene62760.t1 MTR_5g008790 41.379 87 46 2 54 135 18 104 5.55e-13 65.5
MS.gene62760.t1 MTR_2g438180 53.226 62 28 1 54 114 14 75 7.37e-13 64.7
MS.gene62760.t1 MTR_2g103700 53.571 56 26 0 54 109 7 62 7.73e-13 65.5
MS.gene62760.t1 MTR_2g015050 54.386 57 25 1 54 109 134 190 9.54e-13 67.0
MS.gene62760.t1 MTR_5g009620 49.333 75 28 2 41 109 97 167 1.10e-12 67.0
MS.gene62760.t1 MTR_5g008540 49.180 61 31 0 56 116 26 86 1.26e-12 62.8
MS.gene62760.t1 MTR_3g090760 40.625 96 48 1 28 123 96 182 1.92e-12 66.6
MS.gene62760.t1 MTR_1g070070 54.386 57 25 1 54 109 21 77 2.31e-12 63.5
MS.gene62760.t1 MTR_4g078710 53.571 56 26 0 54 109 28 83 2.42e-12 65.1
MS.gene62760.t1 MTR_2g014340 53.571 56 26 0 54 109 19 74 2.75e-12 64.7
MS.gene62760.t1 MTR_8g032610 54.545 55 25 0 56 110 29 83 2.75e-12 65.9
MS.gene62760.t1 MTR_1g048610 54.386 57 25 1 54 109 89 145 2.79e-12 65.1
MS.gene62760.t1 MTR_8g099215 45.000 80 38 1 36 109 83 162 3.04e-12 65.9
MS.gene62760.t1 MTR_1g074230 56.140 57 24 1 54 109 19 75 3.99e-12 62.8
MS.gene62760.t1 MTR_8g069360 51.786 56 27 0 54 109 44 99 1.17e-11 64.7
MS.gene62760.t1 MTR_1g090290 51.613 62 27 2 49 109 110 169 1.25e-11 62.8
MS.gene62760.t1 MTR_3g072610 47.191 89 43 2 54 138 25 113 1.65e-11 62.8
MS.gene62760.t1 MTR_4g100450 35.345 116 65 2 4 109 95 210 1.68e-11 63.5
MS.gene62760.t1 MTR_5g085100 44.186 86 38 2 34 119 29 104 2.05e-11 63.2
MS.gene62760.t1 MTR_4g100420 54.386 57 25 1 54 109 157 213 2.73e-11 63.2
MS.gene62760.t1 MTR_2g016730 50.847 59 29 0 51 109 20 78 2.84e-11 63.2
MS.gene62760.t1 MTR_6g041970 40.000 90 41 1 54 143 18 94 3.04e-11 59.3
MS.gene62760.t1 MTR_4g088005 48.438 64 32 1 47 109 50 113 3.34e-11 59.7
MS.gene62760.t1 MTR_4g054360 47.059 68 35 1 47 113 117 184 3.43e-11 62.4
MS.gene62760.t1 MTR_5g032820 53.571 56 26 0 54 109 46 101 3.64e-11 63.2
MS.gene62760.t1 MTR_2g043020 37.363 91 57 0 53 143 18 108 3.70e-11 61.2
MS.gene62760.t1 MTR_7g011630 37.037 108 53 2 16 123 13 105 4.62e-11 62.8
MS.gene62760.t1 MTR_4g111915 45.763 59 32 0 54 112 53 111 5.02e-11 59.7
MS.gene62760.t1 MTR_4g054740 36.458 96 54 2 46 140 89 178 5.99e-11 61.2
MS.gene62760.t1 MTR_7g085810 43.243 74 41 1 54 127 30 102 8.11e-11 61.2
MS.gene62760.t1 MTR_7g081805 36.842 114 63 4 4 109 5 117 9.41e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62760.t1 AT4G25470 50.718 209 94 3 5 205 2 209 5.05e-61 192
MS.gene62760.t1 AT5G51990 50.000 196 84 3 19 201 20 214 1.52e-56 181
MS.gene62760.t1 AT4G25480 50.481 208 95 3 5 205 2 208 2.71e-56 180
MS.gene62760.t1 AT4G25490 52.133 211 86 6 10 211 3 207 6.18e-55 176
MS.gene62760.t1 AT1G12610 66.667 114 38 0 27 140 3 116 7.47e-53 171
MS.gene62760.t1 AT1G63030 64.912 114 40 0 27 140 3 116 1.55e-52 169
MS.gene62760.t1 AT1G63030 64.912 114 40 0 27 140 3 116 1.55e-52 169
MS.gene62760.t1 AT5G25810 66.279 86 29 0 50 135 32 117 4.64e-34 123
MS.gene62760.t1 AT5G11590 60.396 101 37 1 35 135 35 132 2.01e-32 119
MS.gene62760.t1 AT4G32800 58.163 98 35 1 50 141 15 112 1.98e-30 113
MS.gene62760.t1 AT2G44940 59.140 93 38 0 43 135 89 181 8.08e-30 114
MS.gene62760.t1 AT4G16750 50.442 113 51 1 22 129 3 115 8.63e-29 108
MS.gene62760.t1 AT1G01250 61.250 80 31 0 49 128 40 119 1.32e-28 108
MS.gene62760.t1 AT2G35700 61.250 80 31 0 49 128 40 119 1.56e-27 105
MS.gene62760.t1 AT3G16280 62.025 79 30 0 50 128 57 135 1.12e-26 104
MS.gene62760.t1 AT3G16280 62.025 79 30 0 50 128 75 153 1.40e-26 104
MS.gene62760.t1 AT3G60490 54.945 91 40 1 39 128 55 145 1.83e-25 101
MS.gene62760.t1 AT2G36450 40.132 152 75 4 50 189 11 158 5.40e-25 98.6
MS.gene62760.t1 AT5G52020 41.765 170 85 4 50 209 61 226 2.24e-24 98.2
MS.gene62760.t1 AT1G71450 59.756 82 33 0 53 134 23 104 2.53e-24 96.7
MS.gene62760.t1 AT2G25820 61.842 76 29 0 53 128 25 100 3.79e-24 97.4
MS.gene62760.t1 AT1G77200 62.338 77 29 0 52 128 41 117 9.28e-20 85.9
MS.gene62760.t1 AT1G33760 37.427 171 94 3 54 221 20 180 1.12e-19 84.3
MS.gene62760.t1 AT1G74930 45.349 86 47 0 54 139 21 106 4.54e-18 80.5
MS.gene62760.t1 AT4G13620 51.282 78 37 1 35 111 212 289 5.45e-18 83.2
MS.gene62760.t1 AT2G47520 53.968 63 29 0 47 109 43 105 6.31e-18 79.3
MS.gene62760.t1 AT1G21910 44.444 99 34 2 54 138 50 141 2.64e-17 79.0
MS.gene62760.t1 AT1G19210 44.444 90 50 0 54 143 12 101 3.53e-17 77.8
MS.gene62760.t1 AT1G22190 53.425 73 32 1 39 111 70 140 4.61e-17 79.0
MS.gene62760.t1 AT1G46768 57.143 63 26 1 49 111 27 88 5.16e-17 76.3
MS.gene62760.t1 AT1G46768 55.385 65 28 1 49 113 27 90 5.41e-17 76.3
MS.gene62760.t1 AT1G46768 55.385 65 28 1 49 113 27 90 5.41e-17 76.3
MS.gene62760.t1 AT3G50260 39.091 110 55 2 47 156 14 111 5.58e-17 76.3
MS.gene62760.t1 AT5G21960 47.619 84 44 0 52 135 5 88 8.39e-17 77.4
MS.gene62760.t1 AT4G39780 57.377 61 26 0 49 109 88 148 1.01e-16 78.2
MS.gene62760.t1 AT2G23340 38.835 103 58 1 54 156 28 125 1.11e-16 76.3
MS.gene62760.t1 AT4G36900 56.667 60 26 0 50 109 26 85 1.37e-16 76.3
MS.gene62760.t1 AT2G22200 46.591 88 43 1 53 136 70 157 1.43e-16 77.4
MS.gene62760.t1 AT3G16770 51.282 78 31 1 34 111 66 136 2.44e-16 76.6
MS.gene62760.t1 AT5G67190 57.143 56 24 0 54 109 21 76 3.98e-16 74.7
MS.gene62760.t1 AT3G11020 54.545 66 30 0 48 113 72 137 1.22e-15 75.9
MS.gene62760.t1 AT4G31060 45.977 87 44 2 54 137 27 113 1.31e-15 73.6
MS.gene62760.t1 AT1G12630 40.491 163 72 4 41 185 6 161 1.88e-15 73.2
MS.gene62760.t1 AT4G28140 33.333 153 77 4 36 183 120 252 2.63e-15 74.3
MS.gene62760.t1 AT1G78080 57.627 59 25 0 53 111 151 209 2.95e-15 74.7
MS.gene62760.t1 AT4G06746 50.000 62 31 0 54 115 36 97 5.45e-15 70.9
MS.gene62760.t1 AT5G65130 38.983 118 58 3 7 111 54 170 5.95e-15 73.2
MS.gene62760.t1 AT5G65130 38.983 118 58 3 7 111 52 168 6.67e-15 73.2
MS.gene62760.t1 AT1G22810 40.860 93 40 2 54 138 14 99 9.84e-15 70.1
MS.gene62760.t1 AT2G20880 46.341 82 42 1 30 111 165 244 1.12e-14 73.2
MS.gene62760.t1 AT1G36060 59.649 57 23 0 53 109 142 198 1.25e-14 72.8
MS.gene62760.t1 AT5G05410 57.627 59 25 0 54 112 79 137 2.23e-14 72.0
MS.gene62760.t1 AT1G71520 42.708 96 46 3 48 137 8 100 2.67e-14 68.9
MS.gene62760.t1 AT5G05410 58.929 56 23 0 54 109 79 134 2.86e-14 72.0
MS.gene62760.t1 AT5G07580 49.367 79 37 2 48 125 106 182 3.28e-14 70.1
MS.gene62760.t1 AT2G33710 50.769 65 32 0 49 113 65 129 3.88e-14 70.1
MS.gene62760.t1 AT1G75490 51.429 70 34 0 53 122 41 110 5.54e-14 69.3
MS.gene62760.t1 AT2G33710 54.098 61 28 0 49 109 65 125 5.59e-14 69.7
MS.gene62760.t1 AT5G44210 48.571 70 29 1 54 123 33 95 1.14e-13 68.6
MS.gene62760.t1 AT1G15360 57.143 56 24 0 54 109 7 62 1.31e-13 68.2
MS.gene62760.t1 AT1G15360 57.143 56 24 0 54 109 7 62 1.31e-13 68.2
MS.gene62760.t1 AT1G72360 37.795 127 68 3 6 132 28 143 1.57e-13 68.9
MS.gene62760.t1 AT3G15210 55.556 63 25 1 47 109 21 80 2.22e-13 68.2
MS.gene62760.t1 AT1G28360 55.000 60 27 0 54 113 12 71 3.33e-13 67.0
MS.gene62760.t1 AT3G57600 55.357 56 25 0 54 109 28 83 3.54e-13 68.2
MS.gene62760.t1 AT5G47230 45.679 81 42 2 30 109 133 212 3.74e-13 68.6
MS.gene62760.t1 AT5G61890 53.333 60 26 1 50 109 88 145 3.97e-13 67.8
MS.gene62760.t1 AT5G13330 50.000 64 30 1 50 113 37 98 3.98e-13 67.0
MS.gene62760.t1 AT1G28370 55.357 56 25 0 54 109 20 75 4.00e-13 66.2
MS.gene62760.t1 AT5G43410 47.887 71 34 2 40 109 3 71 4.31e-13 65.1
MS.gene62760.t1 AT1G28370 55.357 56 25 0 54 109 58 113 4.41e-13 67.0
MS.gene62760.t1 AT1G72360 41.860 86 41 1 47 132 18 94 5.28e-13 66.6
MS.gene62760.t1 AT4G27950 54.386 57 26 0 54 110 118 174 5.29e-13 68.2
MS.gene62760.t1 AT4G11140 39.785 93 43 2 54 139 87 173 5.94e-13 67.8
MS.gene62760.t1 AT5G61600 57.377 61 23 2 50 109 86 144 6.20e-13 67.0
MS.gene62760.t1 AT1G72360 35.156 128 72 3 6 132 28 145 6.88e-13 67.4
MS.gene62760.t1 AT5G25390 53.571 56 26 0 54 109 7 62 7.05e-13 65.9
MS.gene62760.t1 AT3G61630 46.667 75 34 1 54 128 105 173 9.97e-13 67.4
MS.gene62760.t1 AT5G53290 42.529 87 49 1 24 110 96 181 1.20e-12 67.4
MS.gene62760.t1 AT5G51190 53.968 63 26 2 48 109 68 128 1.46e-12 65.9
MS.gene62760.t1 AT5G25190 57.143 56 24 0 54 109 8 63 2.46e-12 64.3
MS.gene62760.t1 AT1G03800 48.529 68 32 1 42 109 44 108 3.37e-12 65.1
MS.gene62760.t1 AT3G23230 50.000 62 30 1 54 114 20 81 3.52e-12 62.8
MS.gene62760.t1 AT1G12890 44.872 78 40 1 32 109 2 76 3.55e-12 64.7
MS.gene62760.t1 AT2G40340 53.571 56 26 0 54 109 14 69 4.10e-12 65.5
MS.gene62760.t1 AT2G40340 53.571 56 26 0 54 109 14 69 4.10e-12 65.5
MS.gene62760.t1 AT2G40340 53.571 56 26 0 54 109 14 69 4.10e-12 65.5
MS.gene62760.t1 AT4G17490 45.783 83 40 3 30 109 113 193 4.65e-12 65.1
MS.gene62760.t1 AT5G18450 56.140 57 25 0 53 109 33 89 4.93e-12 65.5
MS.gene62760.t1 AT2G40340 53.571 56 26 0 54 109 72 127 8.89e-12 64.3
MS.gene62760.t1 AT2G40340 53.571 56 26 0 54 109 72 127 9.95e-12 64.7
MS.gene62760.t1 AT2G40340 53.571 56 26 0 54 109 79 134 1.02e-11 64.7
MS.gene62760.t1 AT2G46310 30.827 133 84 3 54 183 99 226 1.24e-11 63.9
MS.gene62760.t1 AT2G44840 54.386 57 25 1 54 109 92 148 1.76e-11 62.8
MS.gene62760.t1 AT3G20310 51.667 60 29 0 50 109 23 82 3.50e-11 62.0
MS.gene62760.t1 AT5G19790 51.724 58 28 0 54 111 22 79 3.58e-11 62.4
MS.gene62760.t1 AT4G23750 49.123 57 29 0 54 110 122 178 5.59e-11 62.4
MS.gene62760.t1 AT4G23750 49.123 57 29 0 54 110 122 178 5.59e-11 62.4
MS.gene62760.t1 AT5G47220 52.632 57 26 1 54 109 117 173 5.83e-11 61.6
MS.gene62760.t1 AT5G13910 45.946 74 36 1 54 127 20 89 6.11e-11 60.8
MS.gene62760.t1 AT1G24590 50.794 63 31 0 54 116 58 120 7.05e-11 62.0
MS.gene62760.t1 AT1G12980 53.571 56 26 0 54 109 57 112 9.41e-11 61.6

Find 72 sgRNAs with CRISPR-Local

Find 93 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAGAGGAACTTAGATAAA+TGG 0.259157 6.2:+59084147 MS.gene62760:CDS
TTCCTCCCTGCTCGCTTCTT+CGG 0.269830 6.2:-59084083 None:intergenic
TCCTCCCTGCTCGCTTCTTC+GGG 0.291841 6.2:-59084082 None:intergenic
AGCAGGGAGGAAGATATTTA+AGG 0.337814 6.2:+59084094 MS.gene62760:CDS
GCCAGAGTTGTGGAGGAATA+TGG 0.347166 6.2:+59084505 MS.gene62760:CDS
ATTGAGGAACTTGCTGGAAT+AGG 0.362347 6.2:-59084323 None:intergenic
ACAAGTCTGTTACGACGATC+TGG 0.366999 6.2:+59084996 MS.gene62760:CDS
TGAGTAAATGGAGTGTGAAT+AGG 0.371267 6.2:-59083997 None:intergenic
TGGGCACGGGCTGCCATCTC+AGG 0.377687 6.2:-59084230 None:intergenic
AATCACGATCCTGTACATTA+TGG 0.391348 6.2:-59085056 None:intergenic
GAAGAGGAACTTAGATAAAT+GGG 0.403807 6.2:+59084148 MS.gene62760:CDS
AAACATATTCAGCTCCTTTG+TGG 0.421530 6.2:-59084444 None:intergenic
AACAAAGAAAATAGAAAAGC+AGG 0.423376 6.2:-59085097 None:intergenic
AGCAACCCGAAGAAGCGAGC+AGG 0.429054 6.2:+59084077 MS.gene62760:CDS
CAAATCCTAGTCTTCGTGTT+GGG 0.445852 6.2:-59084188 None:intergenic
TGTGGAAGTTGAAGAAGAGC+AGG 0.453754 6.2:+59084469 MS.gene62760:CDS
ATAAATGGGTTTGTGAAATG+AGG 0.455203 6.2:+59084162 MS.gene62760:CDS
CCAACACGAAGACTAGGATT+TGG 0.458340 6.2:+59084189 MS.gene62760:CDS
TTGGTCATTAAAGTATTGTC+TGG 0.460963 6.2:-59084392 None:intergenic
GCTAACCGCACCTCAGAATC+CGG 0.462048 6.2:-59084050 None:intergenic
TCGCGGCAACATCGTGGGCA+CGG 0.471010 6.2:-59084244 None:intergenic
TCTATAGAGGTGTGAGGAAG+AGG 0.476465 6.2:+59084132 MS.gene62760:CDS
CGCGGCAACATCGTGGGCAC+GGG 0.479148 6.2:-59084243 None:intergenic
TCCCTTTGACGCATCATCAC+CGG 0.483532 6.2:+59084031 MS.gene62760:CDS
ACTCGCCACCCGGTCTATAG+AGG 0.484514 6.2:+59084119 MS.gene62760:CDS
CTCAATAAAAGATATTCAAA+AGG 0.491461 6.2:+59084340 MS.gene62760:CDS
CGGGCTGCCATCTCAGGTGT+TGG 0.492036 6.2:-59084224 None:intergenic
TGTTGCCGCGATGGCATTGA+GGG 0.492308 6.2:+59084256 MS.gene62760:CDS
TTCCTCACACCTCTATAGAC+CGG 0.497253 6.2:-59084128 None:intergenic
TAAATGGGTTTGTGAAATGA+GGG 0.498748 6.2:+59084163 MS.gene62760:CDS
ATCCGGTGATGATGCGTCAA+AGG 0.502720 6.2:-59084033 None:intergenic
GCAACCCGAAGAAGCGAGCA+GGG 0.504187 6.2:+59084078 MS.gene62760:CDS
CTCATTTCACCATAATGTAC+AGG 0.507406 6.2:+59085047 MS.gene62760:CDS
CTGGGCTGTGACTGCAATTG+AGG 0.507947 6.2:+59085015 MS.gene62760:CDS
ATTCAGCTCCTTTGTGGCGA+CGG 0.510271 6.2:-59084438 None:intergenic
ATTGTCTGGTCTAAAAGCTT+CGG 0.510777 6.2:-59084378 None:intergenic
GCCATATTCCTCCACAACTC+TGG 0.515738 6.2:-59084506 None:intergenic
TGCCCACGATGTTGCCGCGA+TGG 0.518429 6.2:+59084247 MS.gene62760:CDS
GATACTCAAAGCTATGTGTA+GGG 0.526521 6.2:-59084538 None:intergenic
TGATACTCAAAGCTATGTGT+AGG 0.535486 6.2:-59084539 None:intergenic
TCCGGTGATGATGCGTCAAA+GGG 0.539487 6.2:-59084032 None:intergenic
CGCATCATCACCGGATTCTG+AGG 0.540483 6.2:+59084040 MS.gene62760:CDS
AAAAGCAGGGTTCGCAGTCA+CGG 0.542932 6.2:-59085083 None:intergenic
GTCTGGTCTAAAAGCTTCGG+CGG 0.543707 6.2:-59084375 None:intergenic
CGAGTCTGCGAAATTGAGAC+AGG 0.559010 6.2:-59084288 None:intergenic
TACAACAGTGTCAATGTCGT+TGG 0.559486 6.2:-59084411 None:intergenic
GGGAACCCAACACGAAGACT+AGG 0.562532 6.2:+59084183 MS.gene62760:CDS
CCAAATCCTAGTCTTCGTGT+TGG 0.562741 6.2:-59084189 None:intergenic
CAAGTCTGTTACGACGATCT+GGG 0.568581 6.2:+59084997 MS.gene62760:CDS
GTGTGAATAGGAAGAGTTGT+TGG 0.570497 6.2:-59083985 None:intergenic
CTGTACATTATGGTGAAATG+AGG 0.573916 6.2:-59085046 None:intergenic
TGCCATCGCGGCAACATCGT+GGG 0.574913 6.2:-59084249 None:intergenic
ATGTTGCCGCGATGGCATTG+AGG 0.576020 6.2:+59084255 MS.gene62760:CDS
TCGCTTCTTCGGGTTGCTTG+CGG 0.584743 6.2:-59084072 None:intergenic
TCCTCACACCTCTATAGACC+GGG 0.594637 6.2:-59084127 None:intergenic
ACAAAGAAAATAGAAAAGCA+GGG 0.596512 6.2:-59085096 None:intergenic
ATTTAAGGAAACTCGCCACC+CGG 0.602002 6.2:+59084109 MS.gene62760:CDS
AGGAACTTGCTGGAATAGGA+AGG 0.609891 6.2:-59084319 None:intergenic
ATGCCATCGCGGCAACATCG+TGG 0.610807 6.2:-59084250 None:intergenic
TGTTGAATATGCCAGAGTTG+TGG 0.615732 6.2:+59084495 MS.gene62760:CDS
TGTAGCTACCGTCGCCACAA+AGG 0.619383 6.2:+59084430 MS.gene62760:CDS
ACGAAGACTAGGATTTGGCT+AGG 0.623466 6.2:+59084194 MS.gene62760:CDS
TCAATTTCGCAGACTCGATG+TGG 0.634852 6.2:+59084294 MS.gene62760:CDS
ACAAGACTTTCAAGATGATG+AGG 0.645752 6.2:+59084583 MS.gene62760:CDS
GTTGCCGCGATGGCATTGAG+GGG 0.660950 6.2:+59084257 MS.gene62760:CDS
ATACTCAAAGCTATGTGTAG+GGG 0.664707 6.2:-59084537 None:intergenic
ACCCGGTCTATAGAGGTGTG+AGG 0.690377 6.2:+59084126 MS.gene62760:CDS
TGAATATGCCAGAGTTGTGG+AGG 0.690920 6.2:+59084498 MS.gene62760:CDS
ACCCGAAGAAGCGAGCAGGG+AGG 0.693278 6.2:+59084081 MS.gene62760:CDS
CATCACCGGATTCTGAGGTG+CGG 0.703769 6.2:+59084045 MS.gene62760:CDS
TCACACCTCTATAGACCGGG+TGG 0.728637 6.2:-59084124 None:intergenic
GCGTCCCCTCAATGCCATCG+CGG 0.739332 6.2:-59084261 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATGTTACTAATTAAAA+GGG - chr6.2:59084691-59084710 None:intergenic 10.0%
!! TATTTATGTTACTAATTAAA+AGG - chr6.2:59084692-59084711 None:intergenic 10.0%
!!! ATGAAAGAAGAATATAATTT+TGG + chr6.2:59084821-59084840 MS.gene62760:intron 15.0%
!! CTCAATAAAAGATATTCAAA+AGG + chr6.2:59084340-59084359 MS.gene62760:CDS 20.0%
!!! AGAAAAATCTTTTGAGTAAA+TGG - chr6.2:59084012-59084031 None:intergenic 20.0%
!!! CTTTAGTTTACTTTTCTTTT+TGG + chr6.2:59084635-59084654 MS.gene62760:intron 20.0%
!!! CTTTTGAATATCTTTTATTG+AGG - chr6.2:59084342-59084361 None:intergenic 20.0%
! AACAAAGAAAATAGAAAAGC+AGG - chr6.2:59085100-59085119 None:intergenic 25.0%
! ACAAAGAAAATAGAAAAGCA+GGG - chr6.2:59085099-59085118 None:intergenic 25.0%
! CATAAATACTGCATATACAT+AGG + chr6.2:59084704-59084723 MS.gene62760:intron 25.0%
!! TTCTTTTTGGATTGTAGAAT+AGG + chr6.2:59084648-59084667 MS.gene62760:intron 25.0%
!!! TATTTTCTTTGTTTTCATCC+TGG + chr6.2:59085107-59085126 MS.gene62760:CDS 25.0%
AAGTTAGTGTAAGCTAAACA+AGG - chr6.2:59084915-59084934 None:intergenic 30.0%
CCAAGTGAAAAGATTACATT+TGG - chr6.2:59084852-59084871 None:intergenic 30.0%
GAAGAGGAACTTAGATAAAT+GGG + chr6.2:59084148-59084167 MS.gene62760:CDS 30.0%
! AATCTTCTCTTCTCTTTTGT+AGG + chr6.2:59084964-59084983 MS.gene62760:intron 30.0%
! ATAAATGGGTTTGTGAAATG+AGG + chr6.2:59084162-59084181 MS.gene62760:CDS 30.0%
! CCAAATGTAATCTTTTCACT+TGG + chr6.2:59084849-59084868 MS.gene62760:intron 30.0%
! TAAATGGGTTTGTGAAATGA+GGG + chr6.2:59084163-59084182 MS.gene62760:CDS 30.0%
! TTTAGCTTACACTAACTTGA+AGG + chr6.2:59084917-59084936 MS.gene62760:intron 30.0%
!! TTGGTCATTAAAGTATTGTC+TGG - chr6.2:59084395-59084414 None:intergenic 30.0%
AAACATATTCAGCTCCTTTG+TGG - chr6.2:59084447-59084466 None:intergenic 35.0%
AATCACGATCCTGTACATTA+TGG - chr6.2:59085059-59085078 None:intergenic 35.0%
ACAAGACTTTCAAGATGATG+AGG + chr6.2:59084583-59084602 MS.gene62760:CDS 35.0%
ATACTCAAAGCTATGTGTAG+GGG - chr6.2:59084540-59084559 None:intergenic 35.0%
ATTGTCTGGTCTAAAAGCTT+CGG - chr6.2:59084381-59084400 None:intergenic 35.0%
CTCATTTCACCATAATGTAC+AGG + chr6.2:59085047-59085066 MS.gene62760:CDS 35.0%
CTGTACATTATGGTGAAATG+AGG - chr6.2:59085049-59085068 None:intergenic 35.0%
GATACTCAAAGCTATGTGTA+GGG - chr6.2:59084541-59084560 None:intergenic 35.0%
GGAAGAGGAACTTAGATAAA+TGG + chr6.2:59084147-59084166 MS.gene62760:CDS 35.0%
TGAGTAAATGGAGTGTGAAT+AGG - chr6.2:59084000-59084019 None:intergenic 35.0%
TGATACTCAAAGCTATGTGT+AGG - chr6.2:59084542-59084561 None:intergenic 35.0%
! AAGATGATGAGGTATCACTA+TGG + chr6.2:59084594-59084613 MS.gene62760:intron 35.0%
! TCTTTTATTGAGGAACTTGC+TGG - chr6.2:59084332-59084351 None:intergenic 35.0%
AGCAGGGAGGAAGATATTTA+AGG + chr6.2:59084094-59084113 MS.gene62760:CDS 40.0%
AGCTTACACTAACTTGAAGG+AGG + chr6.2:59084920-59084939 MS.gene62760:intron 40.0%
GTGTGAATAGGAAGAGTTGT+TGG - chr6.2:59083988-59084007 None:intergenic 40.0%
TACAACAGTGTCAATGTCGT+TGG - chr6.2:59084414-59084433 None:intergenic 40.0%
TGTTGAATATGCCAGAGTTG+TGG + chr6.2:59084495-59084514 MS.gene62760:CDS 40.0%
! AACTTTTCCAACACCTGAGA+TGG + chr6.2:59084217-59084236 MS.gene62760:CDS 40.0%
! CAAATCCTAGTCTTCGTGTT+GGG - chr6.2:59084191-59084210 None:intergenic 40.0%
! CTTTTGTACCTTCTTTTGCC+AGG - chr6.2:59085128-59085147 None:intergenic 40.0%
! GGAGCTGAATATGTTTTGTG+TGG + chr6.2:59084451-59084470 MS.gene62760:CDS 40.0%
! GTTTTCATCCTGGCAAAAGA+AGG + chr6.2:59085117-59085136 MS.gene62760:CDS 40.0%
!! ATTGAGGAACTTGCTGGAAT+AGG - chr6.2:59084326-59084345 None:intergenic 40.0%
ACAAGTCTGTTACGACGATC+TGG + chr6.2:59084996-59085015 MS.gene62760:CDS 45.0%
ACGAAGACTAGGATTTGGCT+AGG + chr6.2:59084194-59084213 MS.gene62760:CDS 45.0%
ATTTAAGGAAACTCGCCACC+CGG + chr6.2:59084109-59084128 MS.gene62760:CDS 45.0%
CAAGTCTGTTACGACGATCT+GGG + chr6.2:59084997-59085016 MS.gene62760:CDS 45.0%
CCAACACGAAGACTAGGATT+TGG + chr6.2:59084189-59084208 MS.gene62760:CDS 45.0%
TCAATTTCGCAGACTCGATG+TGG + chr6.2:59084294-59084313 MS.gene62760:CDS 45.0%
TGAATATGCCAGAGTTGTGG+AGG + chr6.2:59084498-59084517 MS.gene62760:CDS 45.0%
TGTGGAAGTTGAAGAAGAGC+AGG + chr6.2:59084469-59084488 MS.gene62760:CDS 45.0%
TTCCTCACACCTCTATAGAC+CGG - chr6.2:59084131-59084150 None:intergenic 45.0%
! CCAAATCCTAGTCTTCGTGT+TGG - chr6.2:59084192-59084211 None:intergenic 45.0%
! TCTATAGAGGTGTGAGGAAG+AGG + chr6.2:59084132-59084151 MS.gene62760:CDS 45.0%
!! AGGAACTTGCTGGAATAGGA+AGG - chr6.2:59084322-59084341 None:intergenic 45.0%
AAAAGCAGGGTTCGCAGTCA+CGG - chr6.2:59085086-59085105 None:intergenic 50.0%
ATTCAGCTCCTTTGTGGCGA+CGG - chr6.2:59084441-59084460 None:intergenic 50.0%
CGAGTCTGCGAAATTGAGAC+AGG - chr6.2:59084291-59084310 None:intergenic 50.0%
GCCAGAGTTGTGGAGGAATA+TGG + chr6.2:59084505-59084524 MS.gene62760:CDS 50.0%
GCCATATTCCTCCACAACTC+TGG - chr6.2:59084509-59084528 None:intergenic 50.0%
GTCTGGTCTAAAAGCTTCGG+CGG - chr6.2:59084378-59084397 None:intergenic 50.0%
TCCCTTTGACGCATCATCAC+CGG + chr6.2:59084031-59084050 MS.gene62760:CDS 50.0%
TCCTCACACCTCTATAGACC+GGG - chr6.2:59084130-59084149 None:intergenic 50.0%
! ATCCGGTGATGATGCGTCAA+AGG - chr6.2:59084036-59084055 None:intergenic 50.0%
! TCCGGTGATGATGCGTCAAA+GGG - chr6.2:59084035-59084054 None:intergenic 50.0%
ATGTTGCCGCGATGGCATTG+AGG + chr6.2:59084255-59084274 MS.gene62760:CDS 55.0%
CGCATCATCACCGGATTCTG+AGG + chr6.2:59084040-59084059 MS.gene62760:CDS 55.0%
CTGGGCTGTGACTGCAATTG+AGG + chr6.2:59085015-59085034 MS.gene62760:CDS 55.0%
GCTAACCGCACCTCAGAATC+CGG - chr6.2:59084053-59084072 None:intergenic 55.0%
GGGAACCCAACACGAAGACT+AGG + chr6.2:59084183-59084202 MS.gene62760:CDS 55.0%
TCACACCTCTATAGACCGGG+TGG - chr6.2:59084127-59084146 None:intergenic 55.0%
TGTAGCTACCGTCGCCACAA+AGG + chr6.2:59084430-59084449 MS.gene62760:CDS 55.0%
TTCCTCCCTGCTCGCTTCTT+CGG - chr6.2:59084086-59084105 None:intergenic 55.0%
! ACCCGGTCTATAGAGGTGTG+AGG + chr6.2:59084126-59084145 MS.gene62760:CDS 55.0%
! TGTTGCCGCGATGGCATTGA+GGG + chr6.2:59084256-59084275 MS.gene62760:CDS 55.0%
!! CATCACCGGATTCTGAGGTG+CGG + chr6.2:59084045-59084064 MS.gene62760:CDS 55.0%
!! TCGCTTCTTCGGGTTGCTTG+CGG - chr6.2:59084075-59084094 None:intergenic 55.0%
ACTCGCCACCCGGTCTATAG+AGG + chr6.2:59084119-59084138 MS.gene62760:CDS 60.0%
AGCAACCCGAAGAAGCGAGC+AGG + chr6.2:59084077-59084096 MS.gene62760:CDS 60.0%
ATGCCATCGCGGCAACATCG+TGG - chr6.2:59084253-59084272 None:intergenic 60.0%
GCAACCCGAAGAAGCGAGCA+GGG + chr6.2:59084078-59084097 MS.gene62760:CDS 60.0%
TCCTCCCTGCTCGCTTCTTC+GGG - chr6.2:59084085-59084104 None:intergenic 60.0%
TGCCATCGCGGCAACATCGT+GGG - chr6.2:59084252-59084271 None:intergenic 60.0%
! GTTGCCGCGATGGCATTGAG+GGG + chr6.2:59084257-59084276 MS.gene62760:CDS 60.0%
ACCCGAAGAAGCGAGCAGGG+AGG + chr6.2:59084081-59084100 MS.gene62760:CDS 65.0%
CGGGCTGCCATCTCAGGTGT+TGG - chr6.2:59084227-59084246 None:intergenic 65.0%
GCGTCCCCTCAATGCCATCG+CGG - chr6.2:59084264-59084283 None:intergenic 65.0%
TCGCGGCAACATCGTGGGCA+CGG - chr6.2:59084247-59084266 None:intergenic 65.0%
TGCCCACGATGTTGCCGCGA+TGG + chr6.2:59084247-59084266 MS.gene62760:CDS 65.0%
CGCGGCAACATCGTGGGCAC+GGG - chr6.2:59084246-59084265 None:intergenic 70.0%
! TGGGCACGGGCTGCCATCTC+AGG - chr6.2:59084233-59084252 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 59083975 59085159 59083975 ID=MS.gene62760
chr6.2 mRNA 59083975 59085159 59083975 ID=MS.gene62760.t1;Parent=MS.gene62760
chr6.2 exon 59083975 59084604 59083975 ID=MS.gene62760.t1.exon1;Parent=MS.gene62760.t1
chr6.2 CDS 59083975 59084604 59083975 ID=cds.MS.gene62760.t1;Parent=MS.gene62760.t1
chr6.2 exon 59084986 59085159 59084986 ID=MS.gene62760.t1.exon2;Parent=MS.gene62760.t1
chr6.2 CDS 59084986 59085159 59084986 ID=cds.MS.gene62760.t1;Parent=MS.gene62760.t1
Gene Sequence

>MS.gene62760

ATGATTAATACCAACAACTCTTCCTATTCACACTCCATTTACTCAAAAGATTTTTCTCCCTTTGACGCATCATCACCGGATTCTGAGGTGCGGTTAGCCGCAAGCAACCCGAAGAAGCGAGCAGGGAGGAAGATATTTAAGGAAACTCGCCACCCGGTCTATAGAGGTGTGAGGAAGAGGAACTTAGATAAATGGGTTTGTGAAATGAGGGAACCCAACACGAAGACTAGGATTTGGCTAGGAACTTTTCCAACACCTGAGATGGCAGCCCGTGCCCACGATGTTGCCGCGATGGCATTGAGGGGACGCTACGCCTGTCTCAATTTCGCAGACTCGATGTGGCGCCTTCCTATTCCAGCAAGTTCCTCAATAAAAGATATTCAAAAGGCAGCTACAAAAGCCGCCGAAGCTTTTAGACCAGACAATACTTTAATGACCAACGACATTGACACTGTTGTAGCTACCGTCGCCACAAAGGAGCTGAATATGTTTTGTGTGGAAGTTGAAGAAGAGCAGGAAATGTTGAATATGCCAGAGTTGTGGAGGAATATGGCGTTGATGTCCCCTACACATAGCTTTGAGTATCATGAGTATGAAGATATTCATGTACAAGACTTTCAAGATGATGAGGTATCACTATGGAACTTTTAAATTTAATGTCTTTAGTTTACTTTTCTTTTTGGATTGTAGAATAGGAAATGTCTATACTACAACCCTTTTAATTAGTAACATAAATACTGCATATACATAGGTTGAAATTAAAACAGAATTTCTTTTTATAGCTTTTTTTGTGAATTATTAAATCACTAATCAAGCATAAAGTGCATCTCATGATTTTTATTATATATGAAAGAAGAATATAATTTTGGAATTTCCAAATGTAATCTTTTCACTTGGAATTTCAGCTTTTGACATAGAACATATAATCTATTGCTATCCTTGTTTAGCTTACACTAACTTGAAGGAGGTAATATATTGTATCTTGTCTTAATCTTCTCTTCTCTTTTGTAGGACTTTAAAAACAAGTCTGTTACGACGATCTGGGCTGTGACTGCAATTGAGGTGCACTCGCCTCATTTCACCATAATGTACAGGATCGTGATTGTTGCCGTGACTGCGAACCCTGCTTTTCTATTTTCTTTGTTTTCATCCTGGCAAAAGAAGGTACAAAAGAAGAATGAATAA

Protein sequence

>MS.gene62760.t1

MINTNNSSYSHSIYSKDFSPFDASSPDSEVRLAASNPKKRAGRKIFKETRHPVYRGVRKRNLDKWVCEMREPNTKTRIWLGTFPTPEMAARAHDVAAMALRGRYACLNFADSMWRLPIPASSSIKDIQKAATKAAEAFRPDNTLMTNDIDTVVATVATKELNMFCVEVEEEQEMLNMPELWRNMALMSPTHSFEYHEYEDIHVQDFQDDEDFKNKSVTTIWAVTAIEVHSPHFTIMYRIVIVAVTANPAFLFSLFSSWQKKVQKKNE