Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62760.t1 | XP_013452561.1 | 89.5 | 267 | 28 | 0 | 1 | 267 | 1 | 267 | 1.00E-133 | 486.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62760.t1 | Q9SYS6 | 50.7 | 209 | 94 | 3 | 5 | 205 | 2 | 209 | 3.8e-44 | 179.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62760.t1 | A0A072U9V4 | 89.5 | 267 | 28 | 0 | 1 | 267 | 1 | 267 | 7.5e-134 | 486.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene62760.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62760.t1 | MTR_6g465420 | 89.513 | 267 | 28 | 0 | 1 | 267 | 1 | 267 | 2.76e-171 | 473 |
MS.gene62760.t1 | MTR_6g465460 | 82.528 | 269 | 42 | 3 | 1 | 266 | 1 | 267 | 1.69e-155 | 434 |
MS.gene62760.t1 | MTR_6g465450 | 86.531 | 245 | 32 | 1 | 1 | 244 | 1 | 245 | 5.04e-155 | 431 |
MS.gene62760.t1 | MTR_6g465430 | 86.364 | 242 | 31 | 2 | 1 | 241 | 1 | 241 | 9.55e-147 | 410 |
MS.gene62760.t1 | MTR_6g465690 | 65.476 | 252 | 64 | 5 | 4 | 242 | 5 | 246 | 8.33e-104 | 302 |
MS.gene62760.t1 | MTR_6g465530 | 76.042 | 192 | 39 | 3 | 24 | 210 | 3 | 192 | 4.73e-94 | 275 |
MS.gene62760.t1 | MTR_6g465510 | 76.768 | 198 | 31 | 2 | 27 | 210 | 6 | 202 | 4.36e-93 | 273 |
MS.gene62760.t1 | MTR_6g466000 | 70.769 | 195 | 43 | 4 | 27 | 210 | 30 | 221 | 1.03e-92 | 273 |
MS.gene62760.t1 | MTR_6g466130 | 72.432 | 185 | 49 | 2 | 27 | 210 | 39 | 222 | 1.04e-82 | 248 |
MS.gene62760.t1 | MTR_1g101600 | 59.259 | 189 | 72 | 2 | 22 | 210 | 9 | 192 | 4.50e-66 | 204 |
MS.gene62760.t1 | MTR_6g465850 | 51.653 | 242 | 61 | 4 | 24 | 210 | 33 | 273 | 2.67e-65 | 205 |
MS.gene62760.t1 | MTR_6g465990 | 57.949 | 195 | 48 | 5 | 27 | 210 | 16 | 187 | 6.13e-63 | 196 |
MS.gene62760.t1 | MTR_6g466020 | 55.495 | 182 | 59 | 4 | 29 | 210 | 18 | 177 | 2.35e-57 | 181 |
MS.gene62760.t1 | MTR_5g010930 | 57.143 | 147 | 56 | 2 | 29 | 168 | 24 | 170 | 4.64e-52 | 169 |
MS.gene62760.t1 | MTR_4g102660 | 57.527 | 186 | 63 | 8 | 24 | 196 | 14 | 196 | 3.30e-51 | 167 |
MS.gene62760.t1 | MTR_5g010940 | 61.594 | 138 | 44 | 2 | 10 | 138 | 7 | 144 | 5.11e-51 | 167 |
MS.gene62760.t1 | MTR_5g010910 | 65.517 | 116 | 33 | 2 | 30 | 138 | 24 | 139 | 3.06e-48 | 159 |
MS.gene62760.t1 | MTR_3g110205 | 58.416 | 101 | 42 | 0 | 43 | 143 | 32 | 132 | 3.52e-34 | 122 |
MS.gene62760.t1 | MTR_8g006410 | 58.242 | 91 | 38 | 0 | 38 | 128 | 36 | 126 | 9.57e-32 | 116 |
MS.gene62760.t1 | MTR_2g085015 | 50.735 | 136 | 59 | 3 | 2 | 135 | 1 | 130 | 7.14e-31 | 115 |
MS.gene62760.t1 | MTR_7g117690 | 57.143 | 91 | 33 | 1 | 38 | 128 | 18 | 102 | 9.85e-31 | 113 |
MS.gene62760.t1 | MTR_5g012910 | 63.291 | 79 | 29 | 0 | 50 | 128 | 24 | 102 | 3.12e-30 | 112 |
MS.gene62760.t1 | MTR_8g027465 | 52.294 | 109 | 45 | 3 | 24 | 128 | 11 | 116 | 1.52e-29 | 110 |
MS.gene62760.t1 | MTR_7g046260 | 55.319 | 94 | 42 | 0 | 35 | 128 | 42 | 135 | 2.31e-29 | 111 |
MS.gene62760.t1 | MTR_8g102800 | 57.692 | 104 | 42 | 1 | 38 | 141 | 23 | 124 | 9.27e-29 | 109 |
MS.gene62760.t1 | MTR_2g101340 | 39.655 | 174 | 93 | 2 | 21 | 188 | 8 | 175 | 9.48e-29 | 108 |
MS.gene62760.t1 | MTR_8g013860 | 63.291 | 79 | 29 | 0 | 50 | 128 | 43 | 121 | 1.00e-28 | 108 |
MS.gene62760.t1 | MTR_6g088405 | 61.538 | 78 | 30 | 0 | 51 | 128 | 41 | 118 | 1.10e-26 | 103 |
MS.gene62760.t1 | MTR_4g100650 | 62.821 | 78 | 29 | 0 | 51 | 128 | 71 | 148 | 1.71e-26 | 104 |
MS.gene62760.t1 | MTR_4g102670 | 59.494 | 79 | 31 | 1 | 50 | 128 | 11 | 88 | 6.70e-26 | 100 |
MS.gene62760.t1 | MTR_6g088425 | 50.388 | 129 | 53 | 2 | 17 | 135 | 3 | 130 | 3.79e-24 | 97.4 |
MS.gene62760.t1 | MTR_4g035430 | 52.577 | 97 | 41 | 1 | 39 | 135 | 22 | 113 | 1.11e-23 | 95.9 |
MS.gene62760.t1 | MTR_5g008590 | 39.286 | 168 | 83 | 3 | 54 | 202 | 11 | 178 | 4.78e-22 | 90.9 |
MS.gene62760.t1 | MTR_1g006660 | 60.759 | 79 | 31 | 0 | 50 | 128 | 43 | 121 | 2.19e-20 | 87.8 |
MS.gene62760.t1 | MTR_5g008550 | 35.028 | 177 | 96 | 5 | 54 | 217 | 21 | 191 | 3.26e-20 | 85.9 |
MS.gene62760.t1 | MTR_5g008470 | 39.048 | 105 | 64 | 0 | 56 | 160 | 77 | 181 | 1.40e-18 | 81.3 |
MS.gene62760.t1 | MTR_1g060910 | 36.628 | 172 | 65 | 7 | 38 | 189 | 3 | 150 | 1.49e-18 | 80.9 |
MS.gene62760.t1 | MTR_1g014780 | 42.105 | 95 | 48 | 1 | 53 | 140 | 37 | 131 | 1.19e-17 | 80.1 |
MS.gene62760.t1 | MTR_1g014820 | 44.565 | 92 | 47 | 1 | 53 | 140 | 26 | 117 | 5.15e-17 | 79.0 |
MS.gene62760.t1 | MTR_3g102100 | 60.714 | 56 | 22 | 0 | 54 | 109 | 45 | 100 | 5.19e-17 | 77.0 |
MS.gene62760.t1 | MTR_1g019110 | 37.374 | 99 | 59 | 1 | 54 | 152 | 44 | 139 | 2.83e-16 | 75.1 |
MS.gene62760.t1 | MTR_2g435590 | 53.030 | 66 | 31 | 0 | 47 | 112 | 89 | 154 | 2.87e-16 | 76.6 |
MS.gene62760.t1 | MTR_1g014860 | 39.394 | 99 | 53 | 1 | 49 | 140 | 17 | 115 | 2.96e-16 | 75.9 |
MS.gene62760.t1 | MTR_3g074130 | 52.778 | 72 | 32 | 1 | 38 | 109 | 136 | 205 | 7.66e-16 | 76.6 |
MS.gene62760.t1 | MTR_3g105510 | 50.000 | 70 | 35 | 0 | 54 | 123 | 37 | 106 | 8.50e-16 | 75.1 |
MS.gene62760.t1 | MTR_5g083340 | 60.345 | 58 | 23 | 0 | 54 | 111 | 85 | 142 | 1.01e-15 | 76.6 |
MS.gene62760.t1 | MTR_1g101550 | 43.262 | 141 | 70 | 3 | 54 | 185 | 57 | 196 | 1.04e-15 | 74.7 |
MS.gene62760.t1 | MTR_1g090170 | 55.738 | 61 | 27 | 0 | 49 | 109 | 147 | 207 | 1.50e-15 | 75.5 |
MS.gene62760.t1 | MTR_1g014800 | 42.222 | 90 | 45 | 1 | 53 | 135 | 30 | 119 | 2.34e-15 | 73.6 |
MS.gene62760.t1 | MTR_1g090170 | 53.968 | 63 | 29 | 0 | 49 | 111 | 234 | 296 | 2.59e-15 | 75.5 |
MS.gene62760.t1 | MTR_1g087920 | 39.450 | 109 | 61 | 3 | 7 | 111 | 27 | 134 | 3.09e-15 | 74.3 |
MS.gene62760.t1 | MTR_5g016750 | 57.143 | 56 | 24 | 0 | 54 | 109 | 25 | 80 | 3.46e-15 | 72.0 |
MS.gene62760.t1 | MTR_5g062700 | 57.627 | 59 | 25 | 0 | 53 | 111 | 172 | 230 | 3.92e-15 | 74.7 |
MS.gene62760.t1 | MTR_2g043030 | 41.758 | 91 | 53 | 0 | 53 | 143 | 18 | 108 | 4.16e-15 | 72.4 |
MS.gene62760.t1 | MTR_8g090350 | 57.895 | 57 | 24 | 0 | 53 | 109 | 112 | 168 | 5.60e-15 | 73.6 |
MS.gene62760.t1 | MTR_2g105380 | 48.529 | 68 | 35 | 0 | 42 | 109 | 105 | 172 | 7.50e-15 | 73.9 |
MS.gene62760.t1 | MTR_2g090235 | 57.627 | 59 | 25 | 0 | 53 | 111 | 217 | 275 | 7.72e-15 | 73.9 |
MS.gene62760.t1 | MTR_7g021010 | 42.697 | 89 | 50 | 1 | 45 | 132 | 2 | 90 | 9.32e-15 | 69.7 |
MS.gene62760.t1 | MTR_2g043050 | 42.353 | 85 | 49 | 0 | 53 | 137 | 18 | 102 | 1.29e-14 | 71.2 |
MS.gene62760.t1 | MTR_1g028560 | 56.140 | 57 | 25 | 0 | 54 | 110 | 115 | 171 | 1.46e-14 | 72.8 |
MS.gene62760.t1 | MTR_7g028925 | 55.000 | 60 | 24 | 1 | 53 | 112 | 28 | 84 | 1.56e-14 | 68.2 |
MS.gene62760.t1 | MTR_7g020980 | 41.975 | 81 | 47 | 0 | 50 | 130 | 47 | 127 | 1.80e-14 | 70.1 |
MS.gene62760.t1 | MTR_3g105480 | 50.000 | 68 | 34 | 0 | 56 | 123 | 33 | 100 | 2.00e-14 | 70.9 |
MS.gene62760.t1 | MTR_4g086220 | 58.929 | 56 | 23 | 0 | 54 | 109 | 96 | 151 | 2.92e-14 | 70.5 |
MS.gene62760.t1 | MTR_7g021010 | 42.697 | 89 | 50 | 1 | 45 | 132 | 41 | 129 | 3.72e-14 | 69.3 |
MS.gene62760.t1 | MTR_5g083330 | 49.315 | 73 | 37 | 0 | 39 | 111 | 20 | 92 | 4.47e-14 | 70.9 |
MS.gene62760.t1 | MTR_2g089170 | 58.929 | 56 | 23 | 0 | 54 | 109 | 65 | 120 | 6.39e-14 | 68.9 |
MS.gene62760.t1 | MTR_4g086190 | 57.143 | 56 | 24 | 0 | 54 | 109 | 96 | 151 | 9.20e-14 | 69.3 |
MS.gene62760.t1 | MTR_8g022820 | 43.038 | 79 | 42 | 1 | 47 | 125 | 116 | 191 | 9.69e-14 | 70.9 |
MS.gene62760.t1 | MTR_4g086160 | 57.143 | 56 | 24 | 0 | 54 | 109 | 96 | 151 | 9.87e-14 | 69.3 |
MS.gene62760.t1 | MTR_8g022820 | 43.038 | 79 | 42 | 1 | 47 | 125 | 117 | 192 | 1.01e-13 | 70.5 |
MS.gene62760.t1 | MTR_8g022820 | 43.038 | 79 | 42 | 1 | 47 | 125 | 117 | 192 | 1.01e-13 | 70.5 |
MS.gene62760.t1 | MTR_3g053690 | 55.385 | 65 | 26 | 1 | 45 | 109 | 21 | 82 | 1.22e-13 | 68.9 |
MS.gene62760.t1 | MTR_4g086165 | 57.143 | 56 | 24 | 0 | 54 | 109 | 82 | 137 | 1.24e-13 | 68.6 |
MS.gene62760.t1 | MTR_8g092460 | 51.667 | 60 | 29 | 0 | 54 | 113 | 145 | 204 | 1.34e-13 | 69.7 |
MS.gene62760.t1 | MTR_5g082950 | 58.929 | 56 | 23 | 0 | 54 | 109 | 66 | 121 | 1.39e-13 | 70.1 |
MS.gene62760.t1 | MTR_0939s0010 | 57.143 | 56 | 24 | 0 | 54 | 109 | 65 | 120 | 1.50e-13 | 68.2 |
MS.gene62760.t1 | MTR_2g014300 | 58.929 | 56 | 23 | 0 | 54 | 109 | 15 | 70 | 1.51e-13 | 67.4 |
MS.gene62760.t1 | MTR_2g078680 | 46.250 | 80 | 40 | 1 | 34 | 113 | 14 | 90 | 1.96e-13 | 67.8 |
MS.gene62760.t1 | MTR_4g114570 | 55.357 | 56 | 25 | 0 | 54 | 109 | 7 | 62 | 2.07e-13 | 67.8 |
MS.gene62760.t1 | MTR_2g043040 | 40.000 | 90 | 54 | 0 | 53 | 142 | 18 | 107 | 2.42e-13 | 68.2 |
MS.gene62760.t1 | MTR_4g010640 | 55.357 | 56 | 25 | 0 | 54 | 109 | 7 | 62 | 2.89e-13 | 67.4 |
MS.gene62760.t1 | MTR_3g106290 | 58.929 | 56 | 23 | 0 | 54 | 109 | 8 | 63 | 3.21e-13 | 67.0 |
MS.gene62760.t1 | MTR_7g092190 | 57.143 | 56 | 24 | 0 | 54 | 109 | 30 | 85 | 3.42e-13 | 68.6 |
MS.gene62760.t1 | MTR_4g008860 | 58.929 | 56 | 23 | 0 | 54 | 109 | 8 | 63 | 4.85e-13 | 66.6 |
MS.gene62760.t1 | MTR_1g074310 | 56.140 | 57 | 24 | 1 | 54 | 109 | 21 | 77 | 5.44e-13 | 65.1 |
MS.gene62760.t1 | MTR_5g008790 | 41.379 | 87 | 46 | 2 | 54 | 135 | 18 | 104 | 5.55e-13 | 65.5 |
MS.gene62760.t1 | MTR_2g438180 | 53.226 | 62 | 28 | 1 | 54 | 114 | 14 | 75 | 7.37e-13 | 64.7 |
MS.gene62760.t1 | MTR_2g103700 | 53.571 | 56 | 26 | 0 | 54 | 109 | 7 | 62 | 7.73e-13 | 65.5 |
MS.gene62760.t1 | MTR_2g015050 | 54.386 | 57 | 25 | 1 | 54 | 109 | 134 | 190 | 9.54e-13 | 67.0 |
MS.gene62760.t1 | MTR_5g009620 | 49.333 | 75 | 28 | 2 | 41 | 109 | 97 | 167 | 1.10e-12 | 67.0 |
MS.gene62760.t1 | MTR_5g008540 | 49.180 | 61 | 31 | 0 | 56 | 116 | 26 | 86 | 1.26e-12 | 62.8 |
MS.gene62760.t1 | MTR_3g090760 | 40.625 | 96 | 48 | 1 | 28 | 123 | 96 | 182 | 1.92e-12 | 66.6 |
MS.gene62760.t1 | MTR_1g070070 | 54.386 | 57 | 25 | 1 | 54 | 109 | 21 | 77 | 2.31e-12 | 63.5 |
MS.gene62760.t1 | MTR_4g078710 | 53.571 | 56 | 26 | 0 | 54 | 109 | 28 | 83 | 2.42e-12 | 65.1 |
MS.gene62760.t1 | MTR_2g014340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 19 | 74 | 2.75e-12 | 64.7 |
MS.gene62760.t1 | MTR_8g032610 | 54.545 | 55 | 25 | 0 | 56 | 110 | 29 | 83 | 2.75e-12 | 65.9 |
MS.gene62760.t1 | MTR_1g048610 | 54.386 | 57 | 25 | 1 | 54 | 109 | 89 | 145 | 2.79e-12 | 65.1 |
MS.gene62760.t1 | MTR_8g099215 | 45.000 | 80 | 38 | 1 | 36 | 109 | 83 | 162 | 3.04e-12 | 65.9 |
MS.gene62760.t1 | MTR_1g074230 | 56.140 | 57 | 24 | 1 | 54 | 109 | 19 | 75 | 3.99e-12 | 62.8 |
MS.gene62760.t1 | MTR_8g069360 | 51.786 | 56 | 27 | 0 | 54 | 109 | 44 | 99 | 1.17e-11 | 64.7 |
MS.gene62760.t1 | MTR_1g090290 | 51.613 | 62 | 27 | 2 | 49 | 109 | 110 | 169 | 1.25e-11 | 62.8 |
MS.gene62760.t1 | MTR_3g072610 | 47.191 | 89 | 43 | 2 | 54 | 138 | 25 | 113 | 1.65e-11 | 62.8 |
MS.gene62760.t1 | MTR_4g100450 | 35.345 | 116 | 65 | 2 | 4 | 109 | 95 | 210 | 1.68e-11 | 63.5 |
MS.gene62760.t1 | MTR_5g085100 | 44.186 | 86 | 38 | 2 | 34 | 119 | 29 | 104 | 2.05e-11 | 63.2 |
MS.gene62760.t1 | MTR_4g100420 | 54.386 | 57 | 25 | 1 | 54 | 109 | 157 | 213 | 2.73e-11 | 63.2 |
MS.gene62760.t1 | MTR_2g016730 | 50.847 | 59 | 29 | 0 | 51 | 109 | 20 | 78 | 2.84e-11 | 63.2 |
MS.gene62760.t1 | MTR_6g041970 | 40.000 | 90 | 41 | 1 | 54 | 143 | 18 | 94 | 3.04e-11 | 59.3 |
MS.gene62760.t1 | MTR_4g088005 | 48.438 | 64 | 32 | 1 | 47 | 109 | 50 | 113 | 3.34e-11 | 59.7 |
MS.gene62760.t1 | MTR_4g054360 | 47.059 | 68 | 35 | 1 | 47 | 113 | 117 | 184 | 3.43e-11 | 62.4 |
MS.gene62760.t1 | MTR_5g032820 | 53.571 | 56 | 26 | 0 | 54 | 109 | 46 | 101 | 3.64e-11 | 63.2 |
MS.gene62760.t1 | MTR_2g043020 | 37.363 | 91 | 57 | 0 | 53 | 143 | 18 | 108 | 3.70e-11 | 61.2 |
MS.gene62760.t1 | MTR_7g011630 | 37.037 | 108 | 53 | 2 | 16 | 123 | 13 | 105 | 4.62e-11 | 62.8 |
MS.gene62760.t1 | MTR_4g111915 | 45.763 | 59 | 32 | 0 | 54 | 112 | 53 | 111 | 5.02e-11 | 59.7 |
MS.gene62760.t1 | MTR_4g054740 | 36.458 | 96 | 54 | 2 | 46 | 140 | 89 | 178 | 5.99e-11 | 61.2 |
MS.gene62760.t1 | MTR_7g085810 | 43.243 | 74 | 41 | 1 | 54 | 127 | 30 | 102 | 8.11e-11 | 61.2 |
MS.gene62760.t1 | MTR_7g081805 | 36.842 | 114 | 63 | 4 | 4 | 109 | 5 | 117 | 9.41e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62760.t1 | AT4G25470 | 50.718 | 209 | 94 | 3 | 5 | 205 | 2 | 209 | 5.05e-61 | 192 |
MS.gene62760.t1 | AT5G51990 | 50.000 | 196 | 84 | 3 | 19 | 201 | 20 | 214 | 1.52e-56 | 181 |
MS.gene62760.t1 | AT4G25480 | 50.481 | 208 | 95 | 3 | 5 | 205 | 2 | 208 | 2.71e-56 | 180 |
MS.gene62760.t1 | AT4G25490 | 52.133 | 211 | 86 | 6 | 10 | 211 | 3 | 207 | 6.18e-55 | 176 |
MS.gene62760.t1 | AT1G12610 | 66.667 | 114 | 38 | 0 | 27 | 140 | 3 | 116 | 7.47e-53 | 171 |
MS.gene62760.t1 | AT1G63030 | 64.912 | 114 | 40 | 0 | 27 | 140 | 3 | 116 | 1.55e-52 | 169 |
MS.gene62760.t1 | AT1G63030 | 64.912 | 114 | 40 | 0 | 27 | 140 | 3 | 116 | 1.55e-52 | 169 |
MS.gene62760.t1 | AT5G25810 | 66.279 | 86 | 29 | 0 | 50 | 135 | 32 | 117 | 4.64e-34 | 123 |
MS.gene62760.t1 | AT5G11590 | 60.396 | 101 | 37 | 1 | 35 | 135 | 35 | 132 | 2.01e-32 | 119 |
MS.gene62760.t1 | AT4G32800 | 58.163 | 98 | 35 | 1 | 50 | 141 | 15 | 112 | 1.98e-30 | 113 |
MS.gene62760.t1 | AT2G44940 | 59.140 | 93 | 38 | 0 | 43 | 135 | 89 | 181 | 8.08e-30 | 114 |
MS.gene62760.t1 | AT4G16750 | 50.442 | 113 | 51 | 1 | 22 | 129 | 3 | 115 | 8.63e-29 | 108 |
MS.gene62760.t1 | AT1G01250 | 61.250 | 80 | 31 | 0 | 49 | 128 | 40 | 119 | 1.32e-28 | 108 |
MS.gene62760.t1 | AT2G35700 | 61.250 | 80 | 31 | 0 | 49 | 128 | 40 | 119 | 1.56e-27 | 105 |
MS.gene62760.t1 | AT3G16280 | 62.025 | 79 | 30 | 0 | 50 | 128 | 57 | 135 | 1.12e-26 | 104 |
MS.gene62760.t1 | AT3G16280 | 62.025 | 79 | 30 | 0 | 50 | 128 | 75 | 153 | 1.40e-26 | 104 |
MS.gene62760.t1 | AT3G60490 | 54.945 | 91 | 40 | 1 | 39 | 128 | 55 | 145 | 1.83e-25 | 101 |
MS.gene62760.t1 | AT2G36450 | 40.132 | 152 | 75 | 4 | 50 | 189 | 11 | 158 | 5.40e-25 | 98.6 |
MS.gene62760.t1 | AT5G52020 | 41.765 | 170 | 85 | 4 | 50 | 209 | 61 | 226 | 2.24e-24 | 98.2 |
MS.gene62760.t1 | AT1G71450 | 59.756 | 82 | 33 | 0 | 53 | 134 | 23 | 104 | 2.53e-24 | 96.7 |
MS.gene62760.t1 | AT2G25820 | 61.842 | 76 | 29 | 0 | 53 | 128 | 25 | 100 | 3.79e-24 | 97.4 |
MS.gene62760.t1 | AT1G77200 | 62.338 | 77 | 29 | 0 | 52 | 128 | 41 | 117 | 9.28e-20 | 85.9 |
MS.gene62760.t1 | AT1G33760 | 37.427 | 171 | 94 | 3 | 54 | 221 | 20 | 180 | 1.12e-19 | 84.3 |
MS.gene62760.t1 | AT1G74930 | 45.349 | 86 | 47 | 0 | 54 | 139 | 21 | 106 | 4.54e-18 | 80.5 |
MS.gene62760.t1 | AT4G13620 | 51.282 | 78 | 37 | 1 | 35 | 111 | 212 | 289 | 5.45e-18 | 83.2 |
MS.gene62760.t1 | AT2G47520 | 53.968 | 63 | 29 | 0 | 47 | 109 | 43 | 105 | 6.31e-18 | 79.3 |
MS.gene62760.t1 | AT1G21910 | 44.444 | 99 | 34 | 2 | 54 | 138 | 50 | 141 | 2.64e-17 | 79.0 |
MS.gene62760.t1 | AT1G19210 | 44.444 | 90 | 50 | 0 | 54 | 143 | 12 | 101 | 3.53e-17 | 77.8 |
MS.gene62760.t1 | AT1G22190 | 53.425 | 73 | 32 | 1 | 39 | 111 | 70 | 140 | 4.61e-17 | 79.0 |
MS.gene62760.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 49 | 111 | 27 | 88 | 5.16e-17 | 76.3 |
MS.gene62760.t1 | AT1G46768 | 55.385 | 65 | 28 | 1 | 49 | 113 | 27 | 90 | 5.41e-17 | 76.3 |
MS.gene62760.t1 | AT1G46768 | 55.385 | 65 | 28 | 1 | 49 | 113 | 27 | 90 | 5.41e-17 | 76.3 |
MS.gene62760.t1 | AT3G50260 | 39.091 | 110 | 55 | 2 | 47 | 156 | 14 | 111 | 5.58e-17 | 76.3 |
MS.gene62760.t1 | AT5G21960 | 47.619 | 84 | 44 | 0 | 52 | 135 | 5 | 88 | 8.39e-17 | 77.4 |
MS.gene62760.t1 | AT4G39780 | 57.377 | 61 | 26 | 0 | 49 | 109 | 88 | 148 | 1.01e-16 | 78.2 |
MS.gene62760.t1 | AT2G23340 | 38.835 | 103 | 58 | 1 | 54 | 156 | 28 | 125 | 1.11e-16 | 76.3 |
MS.gene62760.t1 | AT4G36900 | 56.667 | 60 | 26 | 0 | 50 | 109 | 26 | 85 | 1.37e-16 | 76.3 |
MS.gene62760.t1 | AT2G22200 | 46.591 | 88 | 43 | 1 | 53 | 136 | 70 | 157 | 1.43e-16 | 77.4 |
MS.gene62760.t1 | AT3G16770 | 51.282 | 78 | 31 | 1 | 34 | 111 | 66 | 136 | 2.44e-16 | 76.6 |
MS.gene62760.t1 | AT5G67190 | 57.143 | 56 | 24 | 0 | 54 | 109 | 21 | 76 | 3.98e-16 | 74.7 |
MS.gene62760.t1 | AT3G11020 | 54.545 | 66 | 30 | 0 | 48 | 113 | 72 | 137 | 1.22e-15 | 75.9 |
MS.gene62760.t1 | AT4G31060 | 45.977 | 87 | 44 | 2 | 54 | 137 | 27 | 113 | 1.31e-15 | 73.6 |
MS.gene62760.t1 | AT1G12630 | 40.491 | 163 | 72 | 4 | 41 | 185 | 6 | 161 | 1.88e-15 | 73.2 |
MS.gene62760.t1 | AT4G28140 | 33.333 | 153 | 77 | 4 | 36 | 183 | 120 | 252 | 2.63e-15 | 74.3 |
MS.gene62760.t1 | AT1G78080 | 57.627 | 59 | 25 | 0 | 53 | 111 | 151 | 209 | 2.95e-15 | 74.7 |
MS.gene62760.t1 | AT4G06746 | 50.000 | 62 | 31 | 0 | 54 | 115 | 36 | 97 | 5.45e-15 | 70.9 |
MS.gene62760.t1 | AT5G65130 | 38.983 | 118 | 58 | 3 | 7 | 111 | 54 | 170 | 5.95e-15 | 73.2 |
MS.gene62760.t1 | AT5G65130 | 38.983 | 118 | 58 | 3 | 7 | 111 | 52 | 168 | 6.67e-15 | 73.2 |
MS.gene62760.t1 | AT1G22810 | 40.860 | 93 | 40 | 2 | 54 | 138 | 14 | 99 | 9.84e-15 | 70.1 |
MS.gene62760.t1 | AT2G20880 | 46.341 | 82 | 42 | 1 | 30 | 111 | 165 | 244 | 1.12e-14 | 73.2 |
MS.gene62760.t1 | AT1G36060 | 59.649 | 57 | 23 | 0 | 53 | 109 | 142 | 198 | 1.25e-14 | 72.8 |
MS.gene62760.t1 | AT5G05410 | 57.627 | 59 | 25 | 0 | 54 | 112 | 79 | 137 | 2.23e-14 | 72.0 |
MS.gene62760.t1 | AT1G71520 | 42.708 | 96 | 46 | 3 | 48 | 137 | 8 | 100 | 2.67e-14 | 68.9 |
MS.gene62760.t1 | AT5G05410 | 58.929 | 56 | 23 | 0 | 54 | 109 | 79 | 134 | 2.86e-14 | 72.0 |
MS.gene62760.t1 | AT5G07580 | 49.367 | 79 | 37 | 2 | 48 | 125 | 106 | 182 | 3.28e-14 | 70.1 |
MS.gene62760.t1 | AT2G33710 | 50.769 | 65 | 32 | 0 | 49 | 113 | 65 | 129 | 3.88e-14 | 70.1 |
MS.gene62760.t1 | AT1G75490 | 51.429 | 70 | 34 | 0 | 53 | 122 | 41 | 110 | 5.54e-14 | 69.3 |
MS.gene62760.t1 | AT2G33710 | 54.098 | 61 | 28 | 0 | 49 | 109 | 65 | 125 | 5.59e-14 | 69.7 |
MS.gene62760.t1 | AT5G44210 | 48.571 | 70 | 29 | 1 | 54 | 123 | 33 | 95 | 1.14e-13 | 68.6 |
MS.gene62760.t1 | AT1G15360 | 57.143 | 56 | 24 | 0 | 54 | 109 | 7 | 62 | 1.31e-13 | 68.2 |
MS.gene62760.t1 | AT1G15360 | 57.143 | 56 | 24 | 0 | 54 | 109 | 7 | 62 | 1.31e-13 | 68.2 |
MS.gene62760.t1 | AT1G72360 | 37.795 | 127 | 68 | 3 | 6 | 132 | 28 | 143 | 1.57e-13 | 68.9 |
MS.gene62760.t1 | AT3G15210 | 55.556 | 63 | 25 | 1 | 47 | 109 | 21 | 80 | 2.22e-13 | 68.2 |
MS.gene62760.t1 | AT1G28360 | 55.000 | 60 | 27 | 0 | 54 | 113 | 12 | 71 | 3.33e-13 | 67.0 |
MS.gene62760.t1 | AT3G57600 | 55.357 | 56 | 25 | 0 | 54 | 109 | 28 | 83 | 3.54e-13 | 68.2 |
MS.gene62760.t1 | AT5G47230 | 45.679 | 81 | 42 | 2 | 30 | 109 | 133 | 212 | 3.74e-13 | 68.6 |
MS.gene62760.t1 | AT5G61890 | 53.333 | 60 | 26 | 1 | 50 | 109 | 88 | 145 | 3.97e-13 | 67.8 |
MS.gene62760.t1 | AT5G13330 | 50.000 | 64 | 30 | 1 | 50 | 113 | 37 | 98 | 3.98e-13 | 67.0 |
MS.gene62760.t1 | AT1G28370 | 55.357 | 56 | 25 | 0 | 54 | 109 | 20 | 75 | 4.00e-13 | 66.2 |
MS.gene62760.t1 | AT5G43410 | 47.887 | 71 | 34 | 2 | 40 | 109 | 3 | 71 | 4.31e-13 | 65.1 |
MS.gene62760.t1 | AT1G28370 | 55.357 | 56 | 25 | 0 | 54 | 109 | 58 | 113 | 4.41e-13 | 67.0 |
MS.gene62760.t1 | AT1G72360 | 41.860 | 86 | 41 | 1 | 47 | 132 | 18 | 94 | 5.28e-13 | 66.6 |
MS.gene62760.t1 | AT4G27950 | 54.386 | 57 | 26 | 0 | 54 | 110 | 118 | 174 | 5.29e-13 | 68.2 |
MS.gene62760.t1 | AT4G11140 | 39.785 | 93 | 43 | 2 | 54 | 139 | 87 | 173 | 5.94e-13 | 67.8 |
MS.gene62760.t1 | AT5G61600 | 57.377 | 61 | 23 | 2 | 50 | 109 | 86 | 144 | 6.20e-13 | 67.0 |
MS.gene62760.t1 | AT1G72360 | 35.156 | 128 | 72 | 3 | 6 | 132 | 28 | 145 | 6.88e-13 | 67.4 |
MS.gene62760.t1 | AT5G25390 | 53.571 | 56 | 26 | 0 | 54 | 109 | 7 | 62 | 7.05e-13 | 65.9 |
MS.gene62760.t1 | AT3G61630 | 46.667 | 75 | 34 | 1 | 54 | 128 | 105 | 173 | 9.97e-13 | 67.4 |
MS.gene62760.t1 | AT5G53290 | 42.529 | 87 | 49 | 1 | 24 | 110 | 96 | 181 | 1.20e-12 | 67.4 |
MS.gene62760.t1 | AT5G51190 | 53.968 | 63 | 26 | 2 | 48 | 109 | 68 | 128 | 1.46e-12 | 65.9 |
MS.gene62760.t1 | AT5G25190 | 57.143 | 56 | 24 | 0 | 54 | 109 | 8 | 63 | 2.46e-12 | 64.3 |
MS.gene62760.t1 | AT1G03800 | 48.529 | 68 | 32 | 1 | 42 | 109 | 44 | 108 | 3.37e-12 | 65.1 |
MS.gene62760.t1 | AT3G23230 | 50.000 | 62 | 30 | 1 | 54 | 114 | 20 | 81 | 3.52e-12 | 62.8 |
MS.gene62760.t1 | AT1G12890 | 44.872 | 78 | 40 | 1 | 32 | 109 | 2 | 76 | 3.55e-12 | 64.7 |
MS.gene62760.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 14 | 69 | 4.10e-12 | 65.5 |
MS.gene62760.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 14 | 69 | 4.10e-12 | 65.5 |
MS.gene62760.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 14 | 69 | 4.10e-12 | 65.5 |
MS.gene62760.t1 | AT4G17490 | 45.783 | 83 | 40 | 3 | 30 | 109 | 113 | 193 | 4.65e-12 | 65.1 |
MS.gene62760.t1 | AT5G18450 | 56.140 | 57 | 25 | 0 | 53 | 109 | 33 | 89 | 4.93e-12 | 65.5 |
MS.gene62760.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 72 | 127 | 8.89e-12 | 64.3 |
MS.gene62760.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 72 | 127 | 9.95e-12 | 64.7 |
MS.gene62760.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 79 | 134 | 1.02e-11 | 64.7 |
MS.gene62760.t1 | AT2G46310 | 30.827 | 133 | 84 | 3 | 54 | 183 | 99 | 226 | 1.24e-11 | 63.9 |
MS.gene62760.t1 | AT2G44840 | 54.386 | 57 | 25 | 1 | 54 | 109 | 92 | 148 | 1.76e-11 | 62.8 |
MS.gene62760.t1 | AT3G20310 | 51.667 | 60 | 29 | 0 | 50 | 109 | 23 | 82 | 3.50e-11 | 62.0 |
MS.gene62760.t1 | AT5G19790 | 51.724 | 58 | 28 | 0 | 54 | 111 | 22 | 79 | 3.58e-11 | 62.4 |
MS.gene62760.t1 | AT4G23750 | 49.123 | 57 | 29 | 0 | 54 | 110 | 122 | 178 | 5.59e-11 | 62.4 |
MS.gene62760.t1 | AT4G23750 | 49.123 | 57 | 29 | 0 | 54 | 110 | 122 | 178 | 5.59e-11 | 62.4 |
MS.gene62760.t1 | AT5G47220 | 52.632 | 57 | 26 | 1 | 54 | 109 | 117 | 173 | 5.83e-11 | 61.6 |
MS.gene62760.t1 | AT5G13910 | 45.946 | 74 | 36 | 1 | 54 | 127 | 20 | 89 | 6.11e-11 | 60.8 |
MS.gene62760.t1 | AT1G24590 | 50.794 | 63 | 31 | 0 | 54 | 116 | 58 | 120 | 7.05e-11 | 62.0 |
MS.gene62760.t1 | AT1G12980 | 53.571 | 56 | 26 | 0 | 54 | 109 | 57 | 112 | 9.41e-11 | 61.6 |
Find 72 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAAGAGGAACTTAGATAAA+TGG | 0.259157 | 6.2:+59084147 | MS.gene62760:CDS |
TTCCTCCCTGCTCGCTTCTT+CGG | 0.269830 | 6.2:-59084083 | None:intergenic |
TCCTCCCTGCTCGCTTCTTC+GGG | 0.291841 | 6.2:-59084082 | None:intergenic |
AGCAGGGAGGAAGATATTTA+AGG | 0.337814 | 6.2:+59084094 | MS.gene62760:CDS |
GCCAGAGTTGTGGAGGAATA+TGG | 0.347166 | 6.2:+59084505 | MS.gene62760:CDS |
ATTGAGGAACTTGCTGGAAT+AGG | 0.362347 | 6.2:-59084323 | None:intergenic |
ACAAGTCTGTTACGACGATC+TGG | 0.366999 | 6.2:+59084996 | MS.gene62760:CDS |
TGAGTAAATGGAGTGTGAAT+AGG | 0.371267 | 6.2:-59083997 | None:intergenic |
TGGGCACGGGCTGCCATCTC+AGG | 0.377687 | 6.2:-59084230 | None:intergenic |
AATCACGATCCTGTACATTA+TGG | 0.391348 | 6.2:-59085056 | None:intergenic |
GAAGAGGAACTTAGATAAAT+GGG | 0.403807 | 6.2:+59084148 | MS.gene62760:CDS |
AAACATATTCAGCTCCTTTG+TGG | 0.421530 | 6.2:-59084444 | None:intergenic |
AACAAAGAAAATAGAAAAGC+AGG | 0.423376 | 6.2:-59085097 | None:intergenic |
AGCAACCCGAAGAAGCGAGC+AGG | 0.429054 | 6.2:+59084077 | MS.gene62760:CDS |
CAAATCCTAGTCTTCGTGTT+GGG | 0.445852 | 6.2:-59084188 | None:intergenic |
TGTGGAAGTTGAAGAAGAGC+AGG | 0.453754 | 6.2:+59084469 | MS.gene62760:CDS |
ATAAATGGGTTTGTGAAATG+AGG | 0.455203 | 6.2:+59084162 | MS.gene62760:CDS |
CCAACACGAAGACTAGGATT+TGG | 0.458340 | 6.2:+59084189 | MS.gene62760:CDS |
TTGGTCATTAAAGTATTGTC+TGG | 0.460963 | 6.2:-59084392 | None:intergenic |
GCTAACCGCACCTCAGAATC+CGG | 0.462048 | 6.2:-59084050 | None:intergenic |
TCGCGGCAACATCGTGGGCA+CGG | 0.471010 | 6.2:-59084244 | None:intergenic |
TCTATAGAGGTGTGAGGAAG+AGG | 0.476465 | 6.2:+59084132 | MS.gene62760:CDS |
CGCGGCAACATCGTGGGCAC+GGG | 0.479148 | 6.2:-59084243 | None:intergenic |
TCCCTTTGACGCATCATCAC+CGG | 0.483532 | 6.2:+59084031 | MS.gene62760:CDS |
ACTCGCCACCCGGTCTATAG+AGG | 0.484514 | 6.2:+59084119 | MS.gene62760:CDS |
CTCAATAAAAGATATTCAAA+AGG | 0.491461 | 6.2:+59084340 | MS.gene62760:CDS |
CGGGCTGCCATCTCAGGTGT+TGG | 0.492036 | 6.2:-59084224 | None:intergenic |
TGTTGCCGCGATGGCATTGA+GGG | 0.492308 | 6.2:+59084256 | MS.gene62760:CDS |
TTCCTCACACCTCTATAGAC+CGG | 0.497253 | 6.2:-59084128 | None:intergenic |
TAAATGGGTTTGTGAAATGA+GGG | 0.498748 | 6.2:+59084163 | MS.gene62760:CDS |
ATCCGGTGATGATGCGTCAA+AGG | 0.502720 | 6.2:-59084033 | None:intergenic |
GCAACCCGAAGAAGCGAGCA+GGG | 0.504187 | 6.2:+59084078 | MS.gene62760:CDS |
CTCATTTCACCATAATGTAC+AGG | 0.507406 | 6.2:+59085047 | MS.gene62760:CDS |
CTGGGCTGTGACTGCAATTG+AGG | 0.507947 | 6.2:+59085015 | MS.gene62760:CDS |
ATTCAGCTCCTTTGTGGCGA+CGG | 0.510271 | 6.2:-59084438 | None:intergenic |
ATTGTCTGGTCTAAAAGCTT+CGG | 0.510777 | 6.2:-59084378 | None:intergenic |
GCCATATTCCTCCACAACTC+TGG | 0.515738 | 6.2:-59084506 | None:intergenic |
TGCCCACGATGTTGCCGCGA+TGG | 0.518429 | 6.2:+59084247 | MS.gene62760:CDS |
GATACTCAAAGCTATGTGTA+GGG | 0.526521 | 6.2:-59084538 | None:intergenic |
TGATACTCAAAGCTATGTGT+AGG | 0.535486 | 6.2:-59084539 | None:intergenic |
TCCGGTGATGATGCGTCAAA+GGG | 0.539487 | 6.2:-59084032 | None:intergenic |
CGCATCATCACCGGATTCTG+AGG | 0.540483 | 6.2:+59084040 | MS.gene62760:CDS |
AAAAGCAGGGTTCGCAGTCA+CGG | 0.542932 | 6.2:-59085083 | None:intergenic |
GTCTGGTCTAAAAGCTTCGG+CGG | 0.543707 | 6.2:-59084375 | None:intergenic |
CGAGTCTGCGAAATTGAGAC+AGG | 0.559010 | 6.2:-59084288 | None:intergenic |
TACAACAGTGTCAATGTCGT+TGG | 0.559486 | 6.2:-59084411 | None:intergenic |
GGGAACCCAACACGAAGACT+AGG | 0.562532 | 6.2:+59084183 | MS.gene62760:CDS |
CCAAATCCTAGTCTTCGTGT+TGG | 0.562741 | 6.2:-59084189 | None:intergenic |
CAAGTCTGTTACGACGATCT+GGG | 0.568581 | 6.2:+59084997 | MS.gene62760:CDS |
GTGTGAATAGGAAGAGTTGT+TGG | 0.570497 | 6.2:-59083985 | None:intergenic |
CTGTACATTATGGTGAAATG+AGG | 0.573916 | 6.2:-59085046 | None:intergenic |
TGCCATCGCGGCAACATCGT+GGG | 0.574913 | 6.2:-59084249 | None:intergenic |
ATGTTGCCGCGATGGCATTG+AGG | 0.576020 | 6.2:+59084255 | MS.gene62760:CDS |
TCGCTTCTTCGGGTTGCTTG+CGG | 0.584743 | 6.2:-59084072 | None:intergenic |
TCCTCACACCTCTATAGACC+GGG | 0.594637 | 6.2:-59084127 | None:intergenic |
ACAAAGAAAATAGAAAAGCA+GGG | 0.596512 | 6.2:-59085096 | None:intergenic |
ATTTAAGGAAACTCGCCACC+CGG | 0.602002 | 6.2:+59084109 | MS.gene62760:CDS |
AGGAACTTGCTGGAATAGGA+AGG | 0.609891 | 6.2:-59084319 | None:intergenic |
ATGCCATCGCGGCAACATCG+TGG | 0.610807 | 6.2:-59084250 | None:intergenic |
TGTTGAATATGCCAGAGTTG+TGG | 0.615732 | 6.2:+59084495 | MS.gene62760:CDS |
TGTAGCTACCGTCGCCACAA+AGG | 0.619383 | 6.2:+59084430 | MS.gene62760:CDS |
ACGAAGACTAGGATTTGGCT+AGG | 0.623466 | 6.2:+59084194 | MS.gene62760:CDS |
TCAATTTCGCAGACTCGATG+TGG | 0.634852 | 6.2:+59084294 | MS.gene62760:CDS |
ACAAGACTTTCAAGATGATG+AGG | 0.645752 | 6.2:+59084583 | MS.gene62760:CDS |
GTTGCCGCGATGGCATTGAG+GGG | 0.660950 | 6.2:+59084257 | MS.gene62760:CDS |
ATACTCAAAGCTATGTGTAG+GGG | 0.664707 | 6.2:-59084537 | None:intergenic |
ACCCGGTCTATAGAGGTGTG+AGG | 0.690377 | 6.2:+59084126 | MS.gene62760:CDS |
TGAATATGCCAGAGTTGTGG+AGG | 0.690920 | 6.2:+59084498 | MS.gene62760:CDS |
ACCCGAAGAAGCGAGCAGGG+AGG | 0.693278 | 6.2:+59084081 | MS.gene62760:CDS |
CATCACCGGATTCTGAGGTG+CGG | 0.703769 | 6.2:+59084045 | MS.gene62760:CDS |
TCACACCTCTATAGACCGGG+TGG | 0.728637 | 6.2:-59084124 | None:intergenic |
GCGTCCCCTCAATGCCATCG+CGG | 0.739332 | 6.2:-59084261 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTATGTTACTAATTAAAA+GGG | - | chr6.2:59084691-59084710 | None:intergenic | 10.0% |
!! | TATTTATGTTACTAATTAAA+AGG | - | chr6.2:59084692-59084711 | None:intergenic | 10.0% |
!!! | ATGAAAGAAGAATATAATTT+TGG | + | chr6.2:59084821-59084840 | MS.gene62760:intron | 15.0% |
!! | CTCAATAAAAGATATTCAAA+AGG | + | chr6.2:59084340-59084359 | MS.gene62760:CDS | 20.0% |
!!! | AGAAAAATCTTTTGAGTAAA+TGG | - | chr6.2:59084012-59084031 | None:intergenic | 20.0% |
!!! | CTTTAGTTTACTTTTCTTTT+TGG | + | chr6.2:59084635-59084654 | MS.gene62760:intron | 20.0% |
!!! | CTTTTGAATATCTTTTATTG+AGG | - | chr6.2:59084342-59084361 | None:intergenic | 20.0% |
! | AACAAAGAAAATAGAAAAGC+AGG | - | chr6.2:59085100-59085119 | None:intergenic | 25.0% |
! | ACAAAGAAAATAGAAAAGCA+GGG | - | chr6.2:59085099-59085118 | None:intergenic | 25.0% |
! | CATAAATACTGCATATACAT+AGG | + | chr6.2:59084704-59084723 | MS.gene62760:intron | 25.0% |
!! | TTCTTTTTGGATTGTAGAAT+AGG | + | chr6.2:59084648-59084667 | MS.gene62760:intron | 25.0% |
!!! | TATTTTCTTTGTTTTCATCC+TGG | + | chr6.2:59085107-59085126 | MS.gene62760:CDS | 25.0% |
AAGTTAGTGTAAGCTAAACA+AGG | - | chr6.2:59084915-59084934 | None:intergenic | 30.0% | |
CCAAGTGAAAAGATTACATT+TGG | - | chr6.2:59084852-59084871 | None:intergenic | 30.0% | |
GAAGAGGAACTTAGATAAAT+GGG | + | chr6.2:59084148-59084167 | MS.gene62760:CDS | 30.0% | |
! | AATCTTCTCTTCTCTTTTGT+AGG | + | chr6.2:59084964-59084983 | MS.gene62760:intron | 30.0% |
! | ATAAATGGGTTTGTGAAATG+AGG | + | chr6.2:59084162-59084181 | MS.gene62760:CDS | 30.0% |
! | CCAAATGTAATCTTTTCACT+TGG | + | chr6.2:59084849-59084868 | MS.gene62760:intron | 30.0% |
! | TAAATGGGTTTGTGAAATGA+GGG | + | chr6.2:59084163-59084182 | MS.gene62760:CDS | 30.0% |
! | TTTAGCTTACACTAACTTGA+AGG | + | chr6.2:59084917-59084936 | MS.gene62760:intron | 30.0% |
!! | TTGGTCATTAAAGTATTGTC+TGG | - | chr6.2:59084395-59084414 | None:intergenic | 30.0% |
AAACATATTCAGCTCCTTTG+TGG | - | chr6.2:59084447-59084466 | None:intergenic | 35.0% | |
AATCACGATCCTGTACATTA+TGG | - | chr6.2:59085059-59085078 | None:intergenic | 35.0% | |
ACAAGACTTTCAAGATGATG+AGG | + | chr6.2:59084583-59084602 | MS.gene62760:CDS | 35.0% | |
ATACTCAAAGCTATGTGTAG+GGG | - | chr6.2:59084540-59084559 | None:intergenic | 35.0% | |
ATTGTCTGGTCTAAAAGCTT+CGG | - | chr6.2:59084381-59084400 | None:intergenic | 35.0% | |
CTCATTTCACCATAATGTAC+AGG | + | chr6.2:59085047-59085066 | MS.gene62760:CDS | 35.0% | |
CTGTACATTATGGTGAAATG+AGG | - | chr6.2:59085049-59085068 | None:intergenic | 35.0% | |
GATACTCAAAGCTATGTGTA+GGG | - | chr6.2:59084541-59084560 | None:intergenic | 35.0% | |
GGAAGAGGAACTTAGATAAA+TGG | + | chr6.2:59084147-59084166 | MS.gene62760:CDS | 35.0% | |
TGAGTAAATGGAGTGTGAAT+AGG | - | chr6.2:59084000-59084019 | None:intergenic | 35.0% | |
TGATACTCAAAGCTATGTGT+AGG | - | chr6.2:59084542-59084561 | None:intergenic | 35.0% | |
! | AAGATGATGAGGTATCACTA+TGG | + | chr6.2:59084594-59084613 | MS.gene62760:intron | 35.0% |
! | TCTTTTATTGAGGAACTTGC+TGG | - | chr6.2:59084332-59084351 | None:intergenic | 35.0% |
AGCAGGGAGGAAGATATTTA+AGG | + | chr6.2:59084094-59084113 | MS.gene62760:CDS | 40.0% | |
AGCTTACACTAACTTGAAGG+AGG | + | chr6.2:59084920-59084939 | MS.gene62760:intron | 40.0% | |
GTGTGAATAGGAAGAGTTGT+TGG | - | chr6.2:59083988-59084007 | None:intergenic | 40.0% | |
TACAACAGTGTCAATGTCGT+TGG | - | chr6.2:59084414-59084433 | None:intergenic | 40.0% | |
TGTTGAATATGCCAGAGTTG+TGG | + | chr6.2:59084495-59084514 | MS.gene62760:CDS | 40.0% | |
! | AACTTTTCCAACACCTGAGA+TGG | + | chr6.2:59084217-59084236 | MS.gene62760:CDS | 40.0% |
! | CAAATCCTAGTCTTCGTGTT+GGG | - | chr6.2:59084191-59084210 | None:intergenic | 40.0% |
! | CTTTTGTACCTTCTTTTGCC+AGG | - | chr6.2:59085128-59085147 | None:intergenic | 40.0% |
! | GGAGCTGAATATGTTTTGTG+TGG | + | chr6.2:59084451-59084470 | MS.gene62760:CDS | 40.0% |
! | GTTTTCATCCTGGCAAAAGA+AGG | + | chr6.2:59085117-59085136 | MS.gene62760:CDS | 40.0% |
!! | ATTGAGGAACTTGCTGGAAT+AGG | - | chr6.2:59084326-59084345 | None:intergenic | 40.0% |
ACAAGTCTGTTACGACGATC+TGG | + | chr6.2:59084996-59085015 | MS.gene62760:CDS | 45.0% | |
ACGAAGACTAGGATTTGGCT+AGG | + | chr6.2:59084194-59084213 | MS.gene62760:CDS | 45.0% | |
ATTTAAGGAAACTCGCCACC+CGG | + | chr6.2:59084109-59084128 | MS.gene62760:CDS | 45.0% | |
CAAGTCTGTTACGACGATCT+GGG | + | chr6.2:59084997-59085016 | MS.gene62760:CDS | 45.0% | |
CCAACACGAAGACTAGGATT+TGG | + | chr6.2:59084189-59084208 | MS.gene62760:CDS | 45.0% | |
TCAATTTCGCAGACTCGATG+TGG | + | chr6.2:59084294-59084313 | MS.gene62760:CDS | 45.0% | |
TGAATATGCCAGAGTTGTGG+AGG | + | chr6.2:59084498-59084517 | MS.gene62760:CDS | 45.0% | |
TGTGGAAGTTGAAGAAGAGC+AGG | + | chr6.2:59084469-59084488 | MS.gene62760:CDS | 45.0% | |
TTCCTCACACCTCTATAGAC+CGG | - | chr6.2:59084131-59084150 | None:intergenic | 45.0% | |
! | CCAAATCCTAGTCTTCGTGT+TGG | - | chr6.2:59084192-59084211 | None:intergenic | 45.0% |
! | TCTATAGAGGTGTGAGGAAG+AGG | + | chr6.2:59084132-59084151 | MS.gene62760:CDS | 45.0% |
!! | AGGAACTTGCTGGAATAGGA+AGG | - | chr6.2:59084322-59084341 | None:intergenic | 45.0% |
AAAAGCAGGGTTCGCAGTCA+CGG | - | chr6.2:59085086-59085105 | None:intergenic | 50.0% | |
ATTCAGCTCCTTTGTGGCGA+CGG | - | chr6.2:59084441-59084460 | None:intergenic | 50.0% | |
CGAGTCTGCGAAATTGAGAC+AGG | - | chr6.2:59084291-59084310 | None:intergenic | 50.0% | |
GCCAGAGTTGTGGAGGAATA+TGG | + | chr6.2:59084505-59084524 | MS.gene62760:CDS | 50.0% | |
GCCATATTCCTCCACAACTC+TGG | - | chr6.2:59084509-59084528 | None:intergenic | 50.0% | |
GTCTGGTCTAAAAGCTTCGG+CGG | - | chr6.2:59084378-59084397 | None:intergenic | 50.0% | |
TCCCTTTGACGCATCATCAC+CGG | + | chr6.2:59084031-59084050 | MS.gene62760:CDS | 50.0% | |
TCCTCACACCTCTATAGACC+GGG | - | chr6.2:59084130-59084149 | None:intergenic | 50.0% | |
! | ATCCGGTGATGATGCGTCAA+AGG | - | chr6.2:59084036-59084055 | None:intergenic | 50.0% |
! | TCCGGTGATGATGCGTCAAA+GGG | - | chr6.2:59084035-59084054 | None:intergenic | 50.0% |
ATGTTGCCGCGATGGCATTG+AGG | + | chr6.2:59084255-59084274 | MS.gene62760:CDS | 55.0% | |
CGCATCATCACCGGATTCTG+AGG | + | chr6.2:59084040-59084059 | MS.gene62760:CDS | 55.0% | |
CTGGGCTGTGACTGCAATTG+AGG | + | chr6.2:59085015-59085034 | MS.gene62760:CDS | 55.0% | |
GCTAACCGCACCTCAGAATC+CGG | - | chr6.2:59084053-59084072 | None:intergenic | 55.0% | |
GGGAACCCAACACGAAGACT+AGG | + | chr6.2:59084183-59084202 | MS.gene62760:CDS | 55.0% | |
TCACACCTCTATAGACCGGG+TGG | - | chr6.2:59084127-59084146 | None:intergenic | 55.0% | |
TGTAGCTACCGTCGCCACAA+AGG | + | chr6.2:59084430-59084449 | MS.gene62760:CDS | 55.0% | |
TTCCTCCCTGCTCGCTTCTT+CGG | - | chr6.2:59084086-59084105 | None:intergenic | 55.0% | |
! | ACCCGGTCTATAGAGGTGTG+AGG | + | chr6.2:59084126-59084145 | MS.gene62760:CDS | 55.0% |
! | TGTTGCCGCGATGGCATTGA+GGG | + | chr6.2:59084256-59084275 | MS.gene62760:CDS | 55.0% |
!! | CATCACCGGATTCTGAGGTG+CGG | + | chr6.2:59084045-59084064 | MS.gene62760:CDS | 55.0% |
!! | TCGCTTCTTCGGGTTGCTTG+CGG | - | chr6.2:59084075-59084094 | None:intergenic | 55.0% |
ACTCGCCACCCGGTCTATAG+AGG | + | chr6.2:59084119-59084138 | MS.gene62760:CDS | 60.0% | |
AGCAACCCGAAGAAGCGAGC+AGG | + | chr6.2:59084077-59084096 | MS.gene62760:CDS | 60.0% | |
ATGCCATCGCGGCAACATCG+TGG | - | chr6.2:59084253-59084272 | None:intergenic | 60.0% | |
GCAACCCGAAGAAGCGAGCA+GGG | + | chr6.2:59084078-59084097 | MS.gene62760:CDS | 60.0% | |
TCCTCCCTGCTCGCTTCTTC+GGG | - | chr6.2:59084085-59084104 | None:intergenic | 60.0% | |
TGCCATCGCGGCAACATCGT+GGG | - | chr6.2:59084252-59084271 | None:intergenic | 60.0% | |
! | GTTGCCGCGATGGCATTGAG+GGG | + | chr6.2:59084257-59084276 | MS.gene62760:CDS | 60.0% |
ACCCGAAGAAGCGAGCAGGG+AGG | + | chr6.2:59084081-59084100 | MS.gene62760:CDS | 65.0% | |
CGGGCTGCCATCTCAGGTGT+TGG | - | chr6.2:59084227-59084246 | None:intergenic | 65.0% | |
GCGTCCCCTCAATGCCATCG+CGG | - | chr6.2:59084264-59084283 | None:intergenic | 65.0% | |
TCGCGGCAACATCGTGGGCA+CGG | - | chr6.2:59084247-59084266 | None:intergenic | 65.0% | |
TGCCCACGATGTTGCCGCGA+TGG | + | chr6.2:59084247-59084266 | MS.gene62760:CDS | 65.0% | |
CGCGGCAACATCGTGGGCAC+GGG | - | chr6.2:59084246-59084265 | None:intergenic | 70.0% | |
! | TGGGCACGGGCTGCCATCTC+AGG | - | chr6.2:59084233-59084252 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 59083975 | 59085159 | 59083975 | ID=MS.gene62760 |
chr6.2 | mRNA | 59083975 | 59085159 | 59083975 | ID=MS.gene62760.t1;Parent=MS.gene62760 |
chr6.2 | exon | 59083975 | 59084604 | 59083975 | ID=MS.gene62760.t1.exon1;Parent=MS.gene62760.t1 |
chr6.2 | CDS | 59083975 | 59084604 | 59083975 | ID=cds.MS.gene62760.t1;Parent=MS.gene62760.t1 |
chr6.2 | exon | 59084986 | 59085159 | 59084986 | ID=MS.gene62760.t1.exon2;Parent=MS.gene62760.t1 |
chr6.2 | CDS | 59084986 | 59085159 | 59084986 | ID=cds.MS.gene62760.t1;Parent=MS.gene62760.t1 |
Gene Sequence |
Protein sequence |