Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79321.t1 | AGR40688.1 | 84.1 | 208 | 25 | 1 | 1 | 200 | 1 | 208 | 2.20E-80 | 308.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79321.t1 | Q9SYS6 | 54.9 | 193 | 81 | 4 | 10 | 200 | 28 | 216 | 3.1e-46 | 186.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79321.t1 | S5MAB9 | 84.1 | 208 | 25 | 1 | 1 | 200 | 1 | 208 | 1.6e-80 | 308.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene79321.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79321.t1 | MTR_6g465530 | 91.000 | 200 | 16 | 2 | 1 | 200 | 1 | 198 | 1.49e-117 | 332 |
MS.gene79321.t1 | MTR_6g465510 | 87.081 | 209 | 17 | 2 | 1 | 200 | 1 | 208 | 7.70e-112 | 318 |
MS.gene79321.t1 | MTR_6g465420 | 76.684 | 193 | 38 | 3 | 3 | 194 | 24 | 210 | 1.27e-103 | 299 |
MS.gene79321.t1 | MTR_6g465460 | 77.895 | 190 | 32 | 3 | 7 | 194 | 28 | 209 | 2.82e-102 | 296 |
MS.gene79321.t1 | MTR_6g465450 | 78.974 | 195 | 33 | 3 | 2 | 194 | 23 | 211 | 3.97e-101 | 292 |
MS.gene79321.t1 | MTR_6g465430 | 77.320 | 194 | 35 | 3 | 3 | 194 | 24 | 210 | 1.27e-97 | 283 |
MS.gene79321.t1 | MTR_6g465690 | 75.000 | 188 | 39 | 2 | 5 | 191 | 35 | 215 | 2.61e-94 | 275 |
MS.gene79321.t1 | MTR_6g466000 | 69.458 | 203 | 49 | 2 | 6 | 200 | 30 | 227 | 2.67e-94 | 274 |
MS.gene79321.t1 | MTR_6g466130 | 72.000 | 200 | 50 | 3 | 1 | 200 | 35 | 228 | 3.74e-91 | 266 |
MS.gene79321.t1 | MTR_6g465850 | 55.102 | 245 | 61 | 2 | 5 | 200 | 35 | 279 | 1.25e-73 | 224 |
MS.gene79321.t1 | MTR_1g101600 | 59.701 | 201 | 65 | 4 | 4 | 200 | 12 | 200 | 7.72e-69 | 209 |
MS.gene79321.t1 | MTR_6g465990 | 58.621 | 203 | 51 | 3 | 6 | 200 | 16 | 193 | 2.12e-66 | 202 |
MS.gene79321.t1 | MTR_6g466020 | 57.672 | 189 | 51 | 3 | 10 | 197 | 20 | 180 | 1.38e-60 | 187 |
MS.gene79321.t1 | MTR_5g010930 | 48.095 | 210 | 77 | 7 | 11 | 200 | 27 | 224 | 3.47e-52 | 167 |
MS.gene79321.t1 | MTR_5g010940 | 46.635 | 208 | 95 | 5 | 4 | 200 | 25 | 227 | 1.25e-50 | 163 |
MS.gene79321.t1 | MTR_5g010910 | 47.959 | 196 | 86 | 5 | 16 | 200 | 32 | 222 | 1.48e-49 | 160 |
MS.gene79321.t1 | MTR_4g102660 | 52.113 | 213 | 79 | 9 | 3 | 200 | 14 | 218 | 2.41e-48 | 157 |
MS.gene79321.t1 | MTR_3g110205 | 57.895 | 95 | 40 | 0 | 28 | 122 | 38 | 132 | 3.74e-32 | 115 |
MS.gene79321.t1 | MTR_8g006410 | 65.000 | 80 | 28 | 0 | 28 | 107 | 47 | 126 | 6.04e-32 | 115 |
MS.gene79321.t1 | MTR_7g117690 | 60.227 | 88 | 35 | 0 | 20 | 107 | 15 | 102 | 3.82e-31 | 112 |
MS.gene79321.t1 | MTR_7g046260 | 62.963 | 81 | 30 | 0 | 27 | 107 | 55 | 135 | 1.73e-30 | 112 |
MS.gene79321.t1 | MTR_2g101340 | 55.446 | 101 | 39 | 2 | 13 | 107 | 15 | 115 | 2.14e-30 | 111 |
MS.gene79321.t1 | MTR_8g013860 | 63.291 | 79 | 29 | 0 | 29 | 107 | 43 | 121 | 3.33e-30 | 110 |
MS.gene79321.t1 | MTR_2g085015 | 39.759 | 166 | 80 | 5 | 27 | 174 | 41 | 204 | 5.20e-30 | 110 |
MS.gene79321.t1 | MTR_8g102800 | 56.566 | 99 | 43 | 0 | 23 | 121 | 27 | 125 | 1.27e-29 | 109 |
MS.gene79321.t1 | MTR_5g012910 | 62.025 | 79 | 30 | 0 | 29 | 107 | 24 | 102 | 2.00e-29 | 107 |
MS.gene79321.t1 | MTR_6g088405 | 62.821 | 78 | 29 | 0 | 30 | 107 | 41 | 118 | 4.95e-29 | 107 |
MS.gene79321.t1 | MTR_8g027465 | 56.383 | 94 | 38 | 1 | 17 | 107 | 23 | 116 | 1.68e-28 | 105 |
MS.gene79321.t1 | MTR_4g100650 | 60.256 | 78 | 31 | 0 | 30 | 107 | 71 | 148 | 1.98e-25 | 99.4 |
MS.gene79321.t1 | MTR_4g102670 | 55.696 | 79 | 34 | 1 | 29 | 107 | 11 | 88 | 8.33e-25 | 95.5 |
MS.gene79321.t1 | MTR_6g088425 | 61.628 | 86 | 33 | 0 | 29 | 114 | 45 | 130 | 3.88e-24 | 95.5 |
MS.gene79321.t1 | MTR_4g035430 | 54.217 | 83 | 38 | 0 | 32 | 114 | 31 | 113 | 9.06e-24 | 94.4 |
MS.gene79321.t1 | MTR_5g008590 | 36.932 | 176 | 102 | 3 | 33 | 199 | 11 | 186 | 4.23e-22 | 89.0 |
MS.gene79321.t1 | MTR_1g006660 | 56.522 | 92 | 36 | 1 | 20 | 107 | 30 | 121 | 1.26e-21 | 89.4 |
MS.gene79321.t1 | MTR_5g008550 | 35.915 | 142 | 86 | 2 | 33 | 169 | 21 | 162 | 4.18e-20 | 84.0 |
MS.gene79321.t1 | MTR_2g435590 | 52.000 | 75 | 33 | 1 | 17 | 91 | 83 | 154 | 6.25e-18 | 79.7 |
MS.gene79321.t1 | MTR_8g090350 | 45.161 | 93 | 46 | 2 | 17 | 104 | 95 | 187 | 8.95e-18 | 79.7 |
MS.gene79321.t1 | MTR_1g060910 | 36.416 | 173 | 70 | 8 | 17 | 174 | 3 | 150 | 1.12e-17 | 77.0 |
MS.gene79321.t1 | MTR_5g008470 | 45.238 | 84 | 46 | 0 | 35 | 118 | 77 | 160 | 1.40e-17 | 77.0 |
MS.gene79321.t1 | MTR_3g102100 | 52.113 | 71 | 33 | 1 | 18 | 88 | 31 | 100 | 1.58e-17 | 76.6 |
MS.gene79321.t1 | MTR_1g014780 | 56.667 | 60 | 26 | 0 | 32 | 91 | 37 | 96 | 1.63e-17 | 77.8 |
MS.gene79321.t1 | MTR_2g043030 | 29.255 | 188 | 111 | 4 | 32 | 200 | 18 | 202 | 4.27e-17 | 76.3 |
MS.gene79321.t1 | MTR_3g105510 | 44.706 | 85 | 47 | 0 | 33 | 117 | 37 | 121 | 9.08e-17 | 76.3 |
MS.gene79321.t1 | MTR_1g014820 | 42.391 | 92 | 49 | 1 | 32 | 119 | 26 | 117 | 1.02e-16 | 76.3 |
MS.gene79321.t1 | MTR_7g021010 | 54.412 | 68 | 30 | 1 | 26 | 92 | 4 | 71 | 1.05e-16 | 73.6 |
MS.gene79321.t1 | MTR_1g101550 | 42.254 | 142 | 76 | 4 | 33 | 170 | 57 | 196 | 1.24e-16 | 75.5 |
MS.gene79321.t1 | MTR_7g020980 | 48.101 | 79 | 39 | 1 | 14 | 92 | 34 | 110 | 1.57e-16 | 73.9 |
MS.gene79321.t1 | MTR_1g019110 | 37.374 | 99 | 59 | 1 | 33 | 131 | 44 | 139 | 1.84e-16 | 73.9 |
MS.gene79321.t1 | MTR_4g086220 | 62.500 | 56 | 21 | 0 | 33 | 88 | 96 | 151 | 2.11e-16 | 75.1 |
MS.gene79321.t1 | MTR_3g074130 | 59.322 | 59 | 24 | 0 | 32 | 90 | 149 | 207 | 2.57e-16 | 76.3 |
MS.gene79321.t1 | MTR_7g021010 | 43.373 | 83 | 47 | 0 | 29 | 111 | 47 | 129 | 2.63e-16 | 73.6 |
MS.gene79321.t1 | MTR_5g062700 | 59.322 | 59 | 24 | 0 | 32 | 90 | 172 | 230 | 2.72e-16 | 76.3 |
MS.gene79321.t1 | MTR_2g105380 | 51.471 | 68 | 33 | 0 | 21 | 88 | 105 | 172 | 2.77e-16 | 76.3 |
MS.gene79321.t1 | MTR_2g043050 | 45.882 | 85 | 46 | 0 | 32 | 116 | 18 | 102 | 2.84e-16 | 74.3 |
MS.gene79321.t1 | MTR_1g087920 | 45.652 | 92 | 48 | 1 | 11 | 100 | 53 | 144 | 2.89e-16 | 75.5 |
MS.gene79321.t1 | MTR_1g028560 | 59.649 | 57 | 23 | 0 | 33 | 89 | 115 | 171 | 3.73e-16 | 75.9 |
MS.gene79321.t1 | MTR_5g082950 | 64.286 | 56 | 20 | 0 | 33 | 88 | 66 | 121 | 3.98e-16 | 75.5 |
MS.gene79321.t1 | MTR_1g090170 | 55.556 | 63 | 28 | 0 | 28 | 90 | 147 | 209 | 4.01e-16 | 75.5 |
MS.gene79321.t1 | MTR_1g014860 | 51.562 | 64 | 31 | 0 | 28 | 91 | 17 | 80 | 4.67e-16 | 73.9 |
MS.gene79321.t1 | MTR_5g083340 | 60.345 | 58 | 23 | 0 | 33 | 90 | 85 | 142 | 5.11e-16 | 75.9 |
MS.gene79321.t1 | MTR_2g090235 | 59.322 | 59 | 24 | 0 | 32 | 90 | 217 | 275 | 5.38e-16 | 75.9 |
MS.gene79321.t1 | MTR_8g092460 | 56.667 | 60 | 26 | 0 | 33 | 92 | 145 | 204 | 5.43e-16 | 75.1 |
MS.gene79321.t1 | MTR_1g090170 | 55.556 | 63 | 28 | 0 | 28 | 90 | 234 | 296 | 6.18e-16 | 75.5 |
MS.gene79321.t1 | MTR_4g086160 | 60.714 | 56 | 22 | 0 | 33 | 88 | 96 | 151 | 8.87e-16 | 73.2 |
MS.gene79321.t1 | MTR_5g016750 | 57.143 | 56 | 24 | 0 | 33 | 88 | 25 | 80 | 1.00e-15 | 72.0 |
MS.gene79321.t1 | MTR_2g089170 | 36.154 | 130 | 67 | 4 | 33 | 158 | 65 | 182 | 1.00e-15 | 72.4 |
MS.gene79321.t1 | MTR_3g053690 | 59.375 | 64 | 23 | 1 | 25 | 88 | 22 | 82 | 1.21e-15 | 72.8 |
MS.gene79321.t1 | MTR_4g086190 | 60.714 | 56 | 22 | 0 | 33 | 88 | 96 | 151 | 1.24e-15 | 72.8 |
MS.gene79321.t1 | MTR_1g014800 | 53.333 | 60 | 28 | 0 | 32 | 91 | 30 | 89 | 1.56e-15 | 72.4 |
MS.gene79321.t1 | MTR_4g086165 | 60.714 | 56 | 22 | 0 | 33 | 88 | 82 | 137 | 1.75e-15 | 72.0 |
MS.gene79321.t1 | MTR_2g078680 | 60.714 | 56 | 22 | 0 | 33 | 88 | 31 | 86 | 2.08e-15 | 71.6 |
MS.gene79321.t1 | MTR_4g114570 | 52.113 | 71 | 27 | 1 | 33 | 103 | 7 | 70 | 2.43e-15 | 71.6 |
MS.gene79321.t1 | MTR_7g092190 | 62.500 | 56 | 21 | 0 | 33 | 88 | 30 | 85 | 2.78e-15 | 72.8 |
MS.gene79321.t1 | MTR_3g105480 | 44.578 | 83 | 46 | 0 | 35 | 117 | 33 | 115 | 3.41e-15 | 71.6 |
MS.gene79321.t1 | MTR_5g009620 | 44.565 | 92 | 45 | 1 | 3 | 88 | 76 | 167 | 5.85e-15 | 72.0 |
MS.gene79321.t1 | MTR_1g074310 | 54.839 | 62 | 27 | 1 | 33 | 93 | 21 | 82 | 6.12e-15 | 69.3 |
MS.gene79321.t1 | MTR_4g078710 | 36.893 | 103 | 59 | 1 | 33 | 135 | 28 | 124 | 6.53e-15 | 70.9 |
MS.gene79321.t1 | MTR_2g438180 | 58.065 | 62 | 25 | 1 | 33 | 93 | 14 | 75 | 7.97e-15 | 68.6 |
MS.gene79321.t1 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 23 | 88 | 114 | 179 | 8.62e-15 | 72.0 |
MS.gene79321.t1 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 23 | 88 | 114 | 179 | 8.62e-15 | 72.0 |
MS.gene79321.t1 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 23 | 88 | 113 | 178 | 8.93e-15 | 72.0 |
MS.gene79321.t1 | MTR_7g028925 | 55.000 | 60 | 24 | 1 | 32 | 91 | 28 | 84 | 9.01e-15 | 67.4 |
MS.gene79321.t1 | MTR_0939s0010 | 58.929 | 56 | 23 | 0 | 33 | 88 | 65 | 120 | 1.06e-14 | 69.7 |
MS.gene79321.t1 | MTR_5g083330 | 50.685 | 73 | 36 | 0 | 18 | 90 | 20 | 92 | 1.31e-14 | 70.9 |
MS.gene79321.t1 | MTR_2g015050 | 52.174 | 69 | 32 | 1 | 21 | 88 | 122 | 190 | 1.51e-14 | 70.5 |
MS.gene79321.t1 | MTR_4g010640 | 58.929 | 56 | 23 | 0 | 33 | 88 | 7 | 62 | 2.00e-14 | 69.3 |
MS.gene79321.t1 | MTR_2g103700 | 55.000 | 60 | 27 | 0 | 33 | 92 | 7 | 66 | 3.30e-14 | 67.8 |
MS.gene79321.t1 | MTR_3g072610 | 49.438 | 89 | 41 | 2 | 33 | 117 | 25 | 113 | 3.95e-14 | 68.6 |
MS.gene79321.t1 | MTR_2g014340 | 57.143 | 56 | 24 | 0 | 33 | 88 | 19 | 74 | 5.46e-14 | 67.8 |
MS.gene79321.t1 | MTR_3g090760 | 32.237 | 152 | 91 | 2 | 17 | 158 | 89 | 238 | 5.80e-14 | 69.7 |
MS.gene79321.t1 | MTR_1g048610 | 56.140 | 57 | 24 | 1 | 33 | 88 | 89 | 145 | 7.00e-14 | 68.2 |
MS.gene79321.t1 | MTR_3g106290 | 60.714 | 56 | 22 | 0 | 33 | 88 | 8 | 63 | 7.99e-14 | 67.0 |
MS.gene79321.t1 | MTR_1g070070 | 56.140 | 57 | 24 | 1 | 33 | 88 | 21 | 77 | 1.22e-13 | 65.9 |
MS.gene79321.t1 | MTR_4g100420 | 57.895 | 57 | 23 | 1 | 33 | 88 | 157 | 213 | 1.45e-13 | 68.2 |
MS.gene79321.t1 | MTR_4g054740 | 43.023 | 86 | 43 | 2 | 8 | 92 | 77 | 157 | 1.55e-13 | 67.4 |
MS.gene79321.t1 | MTR_4g008860 | 60.714 | 56 | 22 | 0 | 33 | 88 | 8 | 63 | 1.73e-13 | 66.2 |
MS.gene79321.t1 | MTR_2g043020 | 28.947 | 190 | 110 | 5 | 32 | 200 | 18 | 203 | 1.77e-13 | 66.6 |
MS.gene79321.t1 | MTR_2g014300 | 58.929 | 56 | 23 | 0 | 33 | 88 | 15 | 70 | 2.20e-13 | 65.5 |
MS.gene79321.t1 | MTR_1g074230 | 57.895 | 57 | 23 | 1 | 33 | 88 | 19 | 75 | 2.65e-13 | 64.7 |
MS.gene79321.t1 | MTR_2g043040 | 41.176 | 85 | 50 | 0 | 32 | 116 | 18 | 102 | 3.57e-13 | 66.2 |
MS.gene79321.t1 | MTR_2g016730 | 42.857 | 91 | 46 | 2 | 22 | 111 | 11 | 96 | 3.75e-13 | 67.0 |
MS.gene79321.t1 | MTR_5g085100 | 47.674 | 86 | 35 | 2 | 13 | 98 | 29 | 104 | 3.80e-13 | 66.6 |
MS.gene79321.t1 | MTR_4g054360 | 45.122 | 82 | 39 | 2 | 12 | 92 | 108 | 184 | 3.83e-13 | 66.6 |
MS.gene79321.t1 | MTR_4g100450 | 56.140 | 57 | 24 | 1 | 33 | 88 | 154 | 210 | 3.95e-13 | 67.0 |
MS.gene79321.t1 | MTR_5g085070 | 53.030 | 66 | 24 | 1 | 33 | 98 | 51 | 109 | 5.11e-13 | 66.2 |
MS.gene79321.t1 | MTR_5g075570 | 48.333 | 60 | 31 | 0 | 29 | 88 | 120 | 179 | 1.01e-12 | 65.5 |
MS.gene79321.t1 | MTR_5g008540 | 47.541 | 61 | 32 | 0 | 35 | 95 | 26 | 86 | 1.72e-12 | 61.2 |
MS.gene79321.t1 | MTR_4g088005 | 47.826 | 69 | 35 | 1 | 21 | 88 | 45 | 113 | 2.22e-12 | 61.6 |
MS.gene79321.t1 | MTR_8g099215 | 48.148 | 81 | 33 | 2 | 17 | 88 | 82 | 162 | 2.35e-12 | 64.7 |
MS.gene79321.t1 | MTR_8g069360 | 53.571 | 56 | 26 | 0 | 33 | 88 | 44 | 99 | 2.71e-12 | 65.1 |
MS.gene79321.t1 | MTR_1g090290 | 51.613 | 62 | 27 | 2 | 28 | 88 | 110 | 169 | 3.02e-12 | 63.2 |
MS.gene79321.t1 | MTR_1g074250 | 49.206 | 63 | 30 | 1 | 30 | 90 | 16 | 78 | 3.40e-12 | 61.6 |
MS.gene79321.t1 | MTR_4g054860 | 45.783 | 83 | 39 | 3 | 11 | 92 | 114 | 191 | 4.25e-12 | 63.9 |
MS.gene79321.t1 | MTR_4g111915 | 47.458 | 59 | 31 | 0 | 33 | 91 | 53 | 111 | 4.62e-12 | 61.2 |
MS.gene79321.t1 | MTR_6g029180 | 47.222 | 72 | 37 | 1 | 21 | 92 | 22 | 92 | 1.01e-11 | 62.8 |
MS.gene79321.t1 | MTR_7g081815 | 52.632 | 57 | 26 | 1 | 33 | 88 | 61 | 117 | 1.30e-11 | 61.6 |
MS.gene79321.t1 | MTR_8g006840 | 52.632 | 57 | 26 | 1 | 33 | 88 | 125 | 181 | 1.31e-11 | 61.2 |
MS.gene79321.t1 | MTR_7g081805 | 52.632 | 57 | 26 | 1 | 33 | 88 | 61 | 117 | 1.36e-11 | 61.6 |
MS.gene79321.t1 | MTR_6g041970 | 39.535 | 86 | 39 | 1 | 33 | 118 | 18 | 90 | 1.43e-11 | 58.9 |
MS.gene79321.t1 | MTR_4g100380 | 56.140 | 57 | 24 | 1 | 33 | 88 | 145 | 201 | 1.59e-11 | 62.0 |
MS.gene79321.t1 | MTR_4g112490 | 47.458 | 59 | 31 | 0 | 33 | 91 | 53 | 111 | 1.60e-11 | 61.2 |
MS.gene79321.t1 | MTR_5g008790 | 50.000 | 60 | 28 | 1 | 33 | 90 | 18 | 77 | 1.81e-11 | 60.5 |
MS.gene79321.t1 | MTR_8g085960 | 35.354 | 99 | 60 | 3 | 33 | 128 | 25 | 122 | 2.09e-11 | 61.2 |
MS.gene79321.t1 | MTR_2g015040 | 52.632 | 57 | 26 | 1 | 33 | 88 | 63 | 119 | 2.14e-11 | 60.1 |
MS.gene79321.t1 | MTR_5g032820 | 55.357 | 56 | 25 | 0 | 33 | 88 | 46 | 101 | 2.59e-11 | 62.0 |
MS.gene79321.t1 | MTR_7g085810 | 50.000 | 60 | 30 | 0 | 33 | 92 | 30 | 89 | 2.80e-11 | 61.2 |
MS.gene79321.t1 | MTR_8g006815 | 52.632 | 57 | 26 | 1 | 33 | 88 | 96 | 152 | 2.81e-11 | 60.5 |
MS.gene79321.t1 | MTR_8g023700 | 29.560 | 159 | 86 | 2 | 32 | 164 | 116 | 274 | 2.83e-11 | 62.0 |
MS.gene79321.t1 | MTR_7g011630 | 45.833 | 72 | 36 | 1 | 17 | 88 | 29 | 97 | 4.19e-11 | 61.6 |
MS.gene79321.t1 | MTR_8g032610 | 52.727 | 55 | 26 | 0 | 35 | 89 | 29 | 83 | 5.11e-11 | 60.8 |
MS.gene79321.t1 | MTR_7g096750 | 54.386 | 57 | 25 | 1 | 33 | 88 | 20 | 76 | 5.14e-11 | 58.5 |
MS.gene79321.t1 | MTR_3g095190 | 54.795 | 73 | 32 | 1 | 33 | 104 | 170 | 242 | 5.88e-11 | 60.8 |
MS.gene79321.t1 | MTR_4g119270 | 42.466 | 73 | 40 | 1 | 18 | 88 | 36 | 108 | 6.12e-11 | 60.8 |
MS.gene79321.t1 | MTR_6g012970 | 51.786 | 56 | 27 | 0 | 33 | 88 | 38 | 93 | 6.77e-11 | 60.8 |
MS.gene79321.t1 | MTR_7g081795 | 50.877 | 57 | 27 | 1 | 33 | 88 | 60 | 116 | 9.37e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79321.t1 | AT4G25470 | 56.281 | 199 | 69 | 5 | 10 | 200 | 28 | 216 | 2.57e-69 | 211 |
MS.gene79321.t1 | AT4G25480 | 56.281 | 199 | 67 | 4 | 11 | 200 | 29 | 216 | 2.73e-63 | 195 |
MS.gene79321.t1 | AT4G25490 | 56.500 | 200 | 65 | 5 | 11 | 200 | 26 | 213 | 5.43e-62 | 192 |
MS.gene79321.t1 | AT5G51990 | 51.500 | 200 | 80 | 4 | 10 | 200 | 31 | 222 | 5.80e-61 | 189 |
MS.gene79321.t1 | AT1G12610 | 47.826 | 207 | 96 | 4 | 5 | 200 | 2 | 207 | 1.95e-54 | 172 |
MS.gene79321.t1 | AT1G63030 | 46.429 | 196 | 87 | 3 | 6 | 200 | 3 | 181 | 6.33e-54 | 170 |
MS.gene79321.t1 | AT1G63030 | 46.429 | 196 | 87 | 3 | 6 | 200 | 3 | 181 | 6.33e-54 | 170 |
MS.gene79321.t1 | AT5G25810 | 58.511 | 94 | 38 | 1 | 22 | 114 | 24 | 117 | 1.92e-32 | 116 |
MS.gene79321.t1 | AT2G35700 | 63.750 | 80 | 29 | 0 | 28 | 107 | 40 | 119 | 3.19e-31 | 112 |
MS.gene79321.t1 | AT2G44940 | 39.080 | 174 | 75 | 3 | 22 | 168 | 89 | 258 | 1.56e-30 | 113 |
MS.gene79321.t1 | AT4G16750 | 50.000 | 110 | 50 | 1 | 3 | 107 | 5 | 114 | 2.24e-30 | 110 |
MS.gene79321.t1 | AT5G11590 | 60.465 | 86 | 34 | 0 | 29 | 114 | 47 | 132 | 2.29e-30 | 112 |
MS.gene79321.t1 | AT2G36450 | 41.711 | 187 | 96 | 5 | 21 | 200 | 3 | 183 | 1.87e-29 | 108 |
MS.gene79321.t1 | AT4G32800 | 50.467 | 107 | 47 | 1 | 20 | 120 | 6 | 112 | 1.93e-29 | 108 |
MS.gene79321.t1 | AT3G16280 | 42.391 | 184 | 82 | 5 | 29 | 200 | 75 | 246 | 2.86e-29 | 109 |
MS.gene79321.t1 | AT3G16280 | 42.391 | 184 | 82 | 5 | 29 | 200 | 57 | 228 | 3.18e-29 | 108 |
MS.gene79321.t1 | AT1G01250 | 52.830 | 106 | 47 | 1 | 5 | 107 | 14 | 119 | 1.85e-28 | 105 |
MS.gene79321.t1 | AT3G60490 | 57.317 | 82 | 34 | 1 | 27 | 107 | 64 | 145 | 3.64e-25 | 99.0 |
MS.gene79321.t1 | AT2G25820 | 60.526 | 76 | 30 | 0 | 32 | 107 | 25 | 100 | 5.82e-25 | 97.4 |
MS.gene79321.t1 | AT5G52020 | 43.017 | 179 | 87 | 6 | 29 | 200 | 61 | 231 | 1.36e-24 | 96.7 |
MS.gene79321.t1 | AT1G71450 | 36.095 | 169 | 98 | 3 | 32 | 199 | 23 | 182 | 1.14e-23 | 93.2 |
MS.gene79321.t1 | AT2G47520 | 46.512 | 86 | 43 | 1 | 9 | 91 | 23 | 108 | 2.08e-20 | 84.3 |
MS.gene79321.t1 | AT1G21910 | 48.913 | 92 | 40 | 1 | 33 | 117 | 50 | 141 | 3.08e-20 | 85.1 |
MS.gene79321.t1 | AT1G33760 | 53.933 | 89 | 41 | 0 | 33 | 121 | 20 | 108 | 3.64e-20 | 84.0 |
MS.gene79321.t1 | AT1G77200 | 58.442 | 77 | 32 | 0 | 31 | 107 | 41 | 117 | 9.28e-20 | 84.3 |
MS.gene79321.t1 | AT1G46768 | 58.730 | 63 | 25 | 1 | 28 | 90 | 27 | 88 | 7.61e-19 | 79.3 |
MS.gene79321.t1 | AT1G46768 | 58.730 | 63 | 25 | 1 | 28 | 90 | 27 | 88 | 7.88e-19 | 79.7 |
MS.gene79321.t1 | AT1G46768 | 58.730 | 63 | 25 | 1 | 28 | 90 | 27 | 88 | 7.88e-19 | 79.7 |
MS.gene79321.t1 | AT4G13620 | 61.017 | 59 | 23 | 0 | 32 | 90 | 231 | 289 | 1.57e-18 | 82.8 |
MS.gene79321.t1 | AT3G16770 | 55.556 | 72 | 28 | 1 | 19 | 90 | 69 | 136 | 7.11e-18 | 79.3 |
MS.gene79321.t1 | AT2G22200 | 50.667 | 75 | 35 | 1 | 32 | 104 | 70 | 144 | 8.02e-18 | 79.3 |
MS.gene79321.t1 | AT1G22190 | 54.795 | 73 | 31 | 1 | 18 | 90 | 70 | 140 | 8.44e-18 | 79.3 |
MS.gene79321.t1 | AT4G06746 | 54.839 | 62 | 28 | 0 | 33 | 94 | 36 | 97 | 1.17e-17 | 76.6 |
MS.gene79321.t1 | AT4G39780 | 59.016 | 61 | 25 | 0 | 28 | 88 | 88 | 148 | 1.29e-17 | 79.0 |
MS.gene79321.t1 | AT1G12630 | 39.227 | 181 | 98 | 4 | 29 | 200 | 15 | 192 | 2.12e-17 | 77.0 |
MS.gene79321.t1 | AT5G21960 | 47.619 | 84 | 44 | 0 | 31 | 114 | 5 | 88 | 2.99e-17 | 77.0 |
MS.gene79321.t1 | AT3G50260 | 39.640 | 111 | 55 | 3 | 26 | 136 | 14 | 112 | 3.11e-17 | 75.5 |
MS.gene79321.t1 | AT5G65130 | 53.247 | 77 | 34 | 1 | 18 | 92 | 96 | 172 | 3.13e-17 | 78.2 |
MS.gene79321.t1 | AT5G65130 | 53.247 | 77 | 34 | 1 | 18 | 92 | 94 | 170 | 3.18e-17 | 77.8 |
MS.gene79321.t1 | AT1G74930 | 44.186 | 86 | 48 | 0 | 33 | 118 | 21 | 106 | 3.75e-17 | 76.3 |
MS.gene79321.t1 | AT2G23340 | 46.591 | 88 | 41 | 1 | 33 | 114 | 28 | 115 | 3.76e-17 | 75.9 |
MS.gene79321.t1 | AT4G36900 | 56.667 | 60 | 26 | 0 | 29 | 88 | 26 | 85 | 6.18e-17 | 75.9 |
MS.gene79321.t1 | AT5G67190 | 57.143 | 56 | 24 | 0 | 33 | 88 | 21 | 76 | 1.69e-16 | 74.3 |
MS.gene79321.t1 | AT2G33710 | 49.367 | 79 | 35 | 1 | 28 | 101 | 65 | 143 | 1.80e-16 | 75.1 |
MS.gene79321.t1 | AT1G78080 | 59.322 | 59 | 24 | 0 | 32 | 90 | 151 | 209 | 1.96e-16 | 76.6 |
MS.gene79321.t1 | AT2G33710 | 49.367 | 79 | 35 | 1 | 28 | 101 | 65 | 143 | 2.09e-16 | 75.1 |
MS.gene79321.t1 | AT1G19210 | 36.522 | 115 | 73 | 0 | 33 | 147 | 12 | 126 | 6.90e-16 | 72.8 |
MS.gene79321.t1 | AT3G11020 | 56.061 | 66 | 29 | 0 | 27 | 92 | 72 | 137 | 7.62e-16 | 74.7 |
MS.gene79321.t1 | AT4G28140 | 55.932 | 59 | 26 | 0 | 32 | 90 | 142 | 200 | 7.89e-16 | 74.3 |
MS.gene79321.t1 | AT1G36060 | 61.404 | 57 | 22 | 0 | 32 | 88 | 142 | 198 | 8.30e-16 | 74.7 |
MS.gene79321.t1 | AT3G57600 | 52.778 | 72 | 34 | 0 | 17 | 88 | 12 | 83 | 9.59e-16 | 73.9 |
MS.gene79321.t1 | AT2G20880 | 39.450 | 109 | 61 | 1 | 32 | 140 | 186 | 289 | 1.18e-15 | 74.3 |
MS.gene79321.t1 | AT4G27950 | 59.649 | 57 | 23 | 0 | 33 | 89 | 118 | 174 | 1.74e-15 | 73.9 |
MS.gene79321.t1 | AT5G13330 | 54.688 | 64 | 27 | 1 | 29 | 92 | 37 | 98 | 2.04e-15 | 72.0 |
MS.gene79321.t1 | AT3G15210 | 60.714 | 56 | 22 | 0 | 33 | 88 | 25 | 80 | 2.55e-15 | 72.0 |
MS.gene79321.t1 | AT1G03800 | 52.941 | 68 | 29 | 1 | 21 | 88 | 44 | 108 | 3.49e-15 | 72.0 |
MS.gene79321.t1 | AT5G61890 | 54.688 | 64 | 27 | 1 | 29 | 92 | 88 | 149 | 3.98e-15 | 72.0 |
MS.gene79321.t1 | AT5G61600 | 60.656 | 61 | 21 | 2 | 29 | 88 | 86 | 144 | 6.22e-15 | 71.2 |
MS.gene79321.t1 | AT5G64750 | 35.652 | 115 | 65 | 3 | 43 | 154 | 195 | 303 | 9.12e-15 | 72.0 |
MS.gene79321.t1 | AT5G07580 | 49.367 | 79 | 37 | 2 | 27 | 104 | 106 | 182 | 1.07e-14 | 70.1 |
MS.gene79321.t1 | AT1G71520 | 33.803 | 142 | 71 | 5 | 27 | 162 | 8 | 132 | 1.09e-14 | 68.6 |
MS.gene79321.t1 | AT3G61630 | 48.101 | 79 | 35 | 1 | 33 | 111 | 105 | 177 | 1.11e-14 | 71.2 |
MS.gene79321.t1 | AT5G44210 | 58.929 | 56 | 23 | 0 | 33 | 88 | 33 | 88 | 1.19e-14 | 69.7 |
MS.gene79321.t1 | AT1G15360 | 58.929 | 56 | 23 | 0 | 33 | 88 | 7 | 62 | 1.28e-14 | 69.7 |
MS.gene79321.t1 | AT1G15360 | 58.929 | 56 | 23 | 0 | 33 | 88 | 7 | 62 | 1.28e-14 | 69.7 |
MS.gene79321.t1 | AT4G11140 | 57.143 | 56 | 24 | 0 | 33 | 88 | 87 | 142 | 1.39e-14 | 70.9 |
MS.gene79321.t1 | AT1G22810 | 39.785 | 93 | 41 | 2 | 33 | 117 | 14 | 99 | 1.45e-14 | 68.2 |
MS.gene79321.t1 | AT5G05410 | 57.627 | 59 | 25 | 0 | 33 | 91 | 79 | 137 | 1.47e-14 | 70.9 |
MS.gene79321.t1 | AT1G75490 | 48.611 | 72 | 37 | 0 | 32 | 103 | 41 | 112 | 1.48e-14 | 69.7 |
MS.gene79321.t1 | AT1G43160 | 37.405 | 131 | 70 | 3 | 33 | 163 | 61 | 179 | 1.68e-14 | 69.3 |
MS.gene79321.t1 | AT5G47230 | 52.778 | 72 | 33 | 1 | 18 | 88 | 141 | 212 | 1.95e-14 | 70.5 |
MS.gene79321.t1 | AT5G05410 | 57.627 | 59 | 25 | 0 | 33 | 91 | 79 | 137 | 1.98e-14 | 70.9 |
MS.gene79321.t1 | AT5G51190 | 57.143 | 63 | 24 | 2 | 27 | 88 | 68 | 128 | 2.06e-14 | 69.3 |
MS.gene79321.t1 | AT1G72360 | 44.737 | 76 | 42 | 0 | 13 | 88 | 54 | 129 | 3.34e-14 | 69.3 |
MS.gene79321.t1 | AT1G72360 | 49.206 | 63 | 32 | 0 | 26 | 88 | 18 | 80 | 3.50e-14 | 68.6 |
MS.gene79321.t1 | AT5G25390 | 55.357 | 56 | 25 | 0 | 33 | 88 | 7 | 62 | 4.89e-14 | 67.8 |
MS.gene79321.t1 | AT5G43410 | 55.000 | 60 | 26 | 1 | 30 | 88 | 12 | 71 | 4.94e-14 | 66.6 |
MS.gene79321.t1 | AT1G72360 | 49.206 | 63 | 32 | 0 | 26 | 88 | 69 | 131 | 9.23e-14 | 68.2 |
MS.gene79321.t1 | AT4G31060 | 41.463 | 82 | 44 | 1 | 11 | 88 | 1 | 82 | 9.33e-14 | 67.0 |
MS.gene79321.t1 | AT3G23230 | 51.613 | 62 | 29 | 1 | 33 | 93 | 20 | 81 | 1.04e-13 | 65.9 |
MS.gene79321.t1 | AT5G53290 | 56.140 | 57 | 25 | 0 | 33 | 89 | 125 | 181 | 1.19e-13 | 68.9 |
MS.gene79321.t1 | AT1G28370 | 57.143 | 56 | 24 | 0 | 33 | 88 | 20 | 75 | 1.33e-13 | 66.2 |
MS.gene79321.t1 | AT5G18450 | 47.500 | 80 | 38 | 1 | 9 | 88 | 14 | 89 | 1.59e-13 | 68.2 |
MS.gene79321.t1 | AT2G46310 | 55.357 | 56 | 25 | 0 | 33 | 88 | 99 | 154 | 1.63e-13 | 67.8 |
MS.gene79321.t1 | AT1G28370 | 57.143 | 56 | 24 | 0 | 33 | 88 | 58 | 113 | 2.11e-13 | 66.2 |
MS.gene79321.t1 | AT3G20310 | 53.226 | 62 | 29 | 0 | 27 | 88 | 21 | 82 | 2.71e-13 | 66.6 |
MS.gene79321.t1 | AT4G23750 | 54.386 | 57 | 26 | 0 | 33 | 89 | 122 | 178 | 3.66e-13 | 67.4 |
MS.gene79321.t1 | AT4G23750 | 54.386 | 57 | 26 | 0 | 33 | 89 | 122 | 178 | 3.66e-13 | 67.4 |
MS.gene79321.t1 | AT5G25190 | 58.929 | 56 | 23 | 0 | 33 | 88 | 8 | 63 | 6.52e-13 | 64.7 |
MS.gene79321.t1 | AT1G28360 | 55.000 | 60 | 27 | 0 | 33 | 92 | 12 | 71 | 6.95e-13 | 64.7 |
MS.gene79321.t1 | AT4G17490 | 55.556 | 63 | 25 | 2 | 27 | 88 | 133 | 193 | 8.38e-13 | 65.9 |
MS.gene79321.t1 | AT1G77640 | 45.556 | 90 | 43 | 1 | 33 | 116 | 43 | 132 | 1.01e-12 | 65.1 |
MS.gene79321.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 14 | 69 | 1.51e-12 | 65.1 |
MS.gene79321.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 14 | 69 | 1.51e-12 | 65.1 |
MS.gene79321.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 14 | 69 | 1.51e-12 | 65.1 |
MS.gene79321.t1 | AT1G50640 | 57.143 | 56 | 24 | 0 | 33 | 88 | 28 | 83 | 1.95e-12 | 63.9 |
MS.gene79321.t1 | AT5G19790 | 53.448 | 58 | 27 | 0 | 33 | 90 | 22 | 79 | 2.01e-12 | 64.3 |
MS.gene79321.t1 | AT5G47220 | 56.140 | 57 | 24 | 1 | 33 | 88 | 117 | 173 | 2.32e-12 | 64.3 |
MS.gene79321.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 72 | 127 | 2.42e-12 | 64.7 |
MS.gene79321.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 72 | 127 | 2.72e-12 | 64.7 |
MS.gene79321.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 79 | 134 | 3.25e-12 | 64.7 |
MS.gene79321.t1 | AT5G61590 | 59.701 | 67 | 24 | 2 | 23 | 88 | 99 | 163 | 7.35e-12 | 62.0 |
MS.gene79321.t1 | AT1G12890 | 44.872 | 78 | 40 | 1 | 11 | 88 | 2 | 76 | 7.81e-12 | 62.4 |
MS.gene79321.t1 | AT2G40220 | 64.912 | 57 | 20 | 0 | 33 | 89 | 55 | 111 | 8.72e-12 | 63.2 |
MS.gene79321.t1 | AT4G17500 | 56.140 | 57 | 24 | 1 | 33 | 88 | 148 | 204 | 1.48e-11 | 62.4 |
MS.gene79321.t1 | AT3G23240 | 50.000 | 58 | 28 | 1 | 33 | 89 | 82 | 139 | 1.99e-11 | 61.2 |
MS.gene79321.t1 | AT5G25390 | 51.786 | 56 | 24 | 1 | 33 | 88 | 7 | 59 | 2.07e-11 | 60.8 |
MS.gene79321.t1 | AT2G44840 | 54.386 | 57 | 25 | 1 | 33 | 88 | 92 | 148 | 2.12e-11 | 61.2 |
MS.gene79321.t1 | AT5G07310 | 49.315 | 73 | 35 | 1 | 16 | 88 | 77 | 147 | 2.72e-11 | 61.2 |
MS.gene79321.t1 | AT1G12980 | 55.357 | 56 | 25 | 0 | 33 | 88 | 57 | 112 | 4.41e-11 | 61.2 |
MS.gene79321.t1 | AT1G24590 | 51.562 | 64 | 28 | 1 | 33 | 96 | 58 | 118 | 4.47e-11 | 61.2 |
MS.gene79321.t1 | AT2G40350 | 48.214 | 56 | 29 | 0 | 33 | 88 | 74 | 129 | 6.25e-11 | 58.9 |
MS.gene79321.t1 | AT2G40350 | 48.214 | 56 | 29 | 0 | 33 | 88 | 67 | 122 | 6.57e-11 | 58.5 |
Find 59 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAAGAGGAACTTAGATAAA+TGG | 0.259157 | 6.3:+56127459 | MS.gene79321:CDS |
CAAATCCTAGTCTTCTTATT+CGG | 0.304564 | 6.3:-56127500 | None:intergenic |
AGCAGGGAGGAAGAAGTTTA+AGG | 0.309502 | 6.3:+56127406 | MS.gene79321:CDS |
GCCAGAGTTGTGGAGGAATA+TGG | 0.338237 | 6.3:+56127835 | MS.gene79321:CDS |
TTAAACTTCTTCCTCCCTGC+TGG | 0.404819 | 6.3:-56127404 | None:intergenic |
CGAATAAGAAGACTAGGATT+TGG | 0.406523 | 6.3:+56127501 | MS.gene79321:CDS |
GCCTCAGCGGTGGCAGGAAT+AGG | 0.415517 | 6.3:-56127635 | None:intergenic |
GAAGAGGAACTTAGATAAAT+GGG | 0.423648 | 6.3:+56127460 | MS.gene79321:CDS |
GTGTGCACGGGCAGCCATCT+CGG | 0.428196 | 6.3:-56127543 | None:intergenic |
CGTTGCAGCAATTGCATTGA+GGG | 0.436008 | 6.3:+56127568 | MS.gene79321:CDS |
CTGTCTCAACTTTGCAGACT+CGG | 0.436160 | 6.3:+56127601 | MS.gene79321:CDS |
TTAGTCATTAAAGTCTTGTC+TGG | 0.441603 | 6.3:-56127704 | None:intergenic |
AATGTCCCCTACACATAGTA+TGG | 0.442156 | 6.3:+56127862 | MS.gene79321:CDS |
GGCAGCTGCAGAAGCTGCCG+AGG | 0.451466 | 6.3:+56127673 | MS.gene79321:CDS |
ATATGTTTACAAGTAACAAC+GGG | 0.454775 | 6.3:+56127348 | None:intergenic |
TTGCTGCAACGTCGTGTGCA+CGG | 0.466937 | 6.3:-56127556 | None:intergenic |
TGCTGCAACGTCGTGTGCAC+GGG | 0.472831 | 6.3:-56127555 | None:intergenic |
TGTATAGAGGTGTGAGGAAG+AGG | 0.474025 | 6.3:+56127444 | MS.gene79321:CDS |
AGTACAAGACTTTCAATATG+AGG | 0.490333 | 6.3:+56127907 | MS.gene79321:CDS |
CATGCTCCATACTATGTGTA+GGG | 0.491173 | 6.3:-56127868 | None:intergenic |
ACTCGCCACCCGGTGTATAG+AGG | 0.496516 | 6.3:+56127431 | MS.gene79321:CDS |
CTGAGGCAAAAGACATTCAA+AGG | 0.499259 | 6.3:+56127651 | MS.gene79321:CDS |
TGAAGTCGAAGAAGAAGAAG+AGG | 0.500617 | 6.3:+56127799 | MS.gene79321:CDS |
GCCATATTCCTCCACAACTC+TGG | 0.506491 | 6.3:-56127836 | None:intergenic |
TAAATGGGTATGTGAAATGA+GGG | 0.506863 | 6.3:+56127475 | MS.gene79321:CDS |
AATATGAGGAGGTATCACTA+TGG | 0.509514 | 6.3:+56127921 | MS.gene79321:CDS |
ATAAATGGGTATGTGAAATG+AGG | 0.510310 | 6.3:+56127474 | MS.gene79321:CDS |
ACGTTGCAGCAATTGCATTG+AGG | 0.536298 | 6.3:+56127567 | MS.gene79321:CDS |
TCATGCTCCATACTATGTGT+AGG | 0.541468 | 6.3:-56127869 | None:intergenic |
AAGAAGACTAGGATTTGGCT+AGG | 0.549278 | 6.3:+56127506 | MS.gene79321:CDS |
GTTTAAGGAGACTCGCCACC+CGG | 0.558195 | 6.3:+56127421 | MS.gene79321:CDS |
CGAGTCTGCAAAGTTGAGAC+AGG | 0.558907 | 6.3:-56127600 | None:intergenic |
TTACAAGTAACAACGGGGAG+GGG | 0.563550 | 6.3:+56127354 | MS.gene79321:CDS |
TGAGGCAAAAGACATTCAAA+GGG | 0.575611 | 6.3:+56127652 | MS.gene79321:CDS |
TTCCTCACACCTCTATACAC+CGG | 0.578151 | 6.3:-56127440 | None:intergenic |
TCCTCACACCTCTATACACC+GGG | 0.580421 | 6.3:-56127439 | None:intergenic |
TCCTATTCCTGCCACCGCTG+AGG | 0.581983 | 6.3:+56127634 | MS.gene79321:CDS |
GGGAACCGAATAAGAAGACT+AGG | 0.583565 | 6.3:+56127495 | MS.gene79321:CDS |
CTTGTCTGGTCTGAAAGCCT+CGG | 0.583680 | 6.3:-56127690 | None:intergenic |
TAATGACATTGACACGGTTG+TGG | 0.584743 | 6.3:+56127724 | MS.gene79321:CDS |
TTTACAAGTAACAACGGGGA+GGG | 0.587349 | 6.3:+56127353 | MS.gene79321:CDS |
CAAGTAACAACGGGGAGGGG+CGG | 0.588787 | 6.3:+56127357 | MS.gene79321:CDS |
TCAACTTTGCAGACTCGGTG+TGG | 0.601701 | 6.3:+56127606 | MS.gene79321:CDS |
TGTGGCTGTTGTCGTTGCAG+TGG | 0.604136 | 6.3:+56127742 | MS.gene79321:CDS |
ACTTTGCAGACTCGGTGTGG+AGG | 0.609381 | 6.3:+56127609 | MS.gene79321:CDS |
TGTTGAATATGCCAGAGTTG+TGG | 0.615027 | 6.3:+56127825 | MS.gene79321:CDS |
TGTCGTTGCAGTGGAAGAAG+AGG | 0.624573 | 6.3:+56127751 | MS.gene79321:CDS |
GATATGTTTACAAGTAACAA+CGG | 0.629910 | 6.3:+56127347 | None:intergenic |
GTTGCAGCAATTGCATTGAG+GGG | 0.634472 | 6.3:+56127569 | MS.gene79321:CDS |
AGAAGACTAGGATTTGGCTA+GGG | 0.635435 | 6.3:+56127507 | MS.gene79321:CDS |
AATGACTAATGACATTGACA+CGG | 0.658662 | 6.3:+56127718 | MS.gene79321:CDS |
CAAAGTTGAGACAGGCGTAG+CGG | 0.672645 | 6.3:-56127592 | None:intergenic |
ACAAGACTTTCAATATGAGG+AGG | 0.676699 | 6.3:+56127910 | MS.gene79321:CDS |
TGAATATGCCAGAGTTGTGG+AGG | 0.686416 | 6.3:+56127828 | MS.gene79321:CDS |
GTTTACAAGTAACAACGGGG+AGG | 0.703815 | 6.3:+56127352 | MS.gene79321:CDS |
ACCCGGTGTATAGAGGTGTG+AGG | 0.705873 | 6.3:+56127438 | MS.gene79321:CDS |
ATGCTCCATACTATGTGTAG+GGG | 0.710393 | 6.3:-56127867 | None:intergenic |
TCACACCTCTATACACCGGG+TGG | 0.726886 | 6.3:-56127436 | None:intergenic |
TATGTTTACAAGTAACAACG+GGG | 0.831032 | 6.3:+56127349 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
AATGACTAATGACATTGACA+CGG | + | chr6.3:56127718-56127737 | MS.gene79321:CDS | 30.0% | |
AGTACAAGACTTTCAATATG+AGG | + | chr6.3:56127907-56127926 | MS.gene79321:CDS | 30.0% | |
ATAAATGGGTATGTGAAATG+AGG | + | chr6.3:56127474-56127493 | MS.gene79321:CDS | 30.0% | |
GAAGAGGAACTTAGATAAAT+GGG | + | chr6.3:56127460-56127479 | MS.gene79321:CDS | 30.0% | |
TAAATGGGTATGTGAAATGA+GGG | + | chr6.3:56127475-56127494 | MS.gene79321:CDS | 30.0% | |
! | CAAATCCTAGTCTTCTTATT+CGG | - | chr6.3:56127503-56127522 | None:intergenic | 30.0% |
! | TTAGTCATTAAAGTCTTGTC+TGG | - | chr6.3:56127707-56127726 | None:intergenic | 30.0% |
ACAAGACTTTCAATATGAGG+AGG | + | chr6.3:56127910-56127929 | MS.gene79321:CDS | 35.0% | |
CGAATAAGAAGACTAGGATT+TGG | + | chr6.3:56127501-56127520 | MS.gene79321:CDS | 35.0% | |
GGAAGAGGAACTTAGATAAA+TGG | + | chr6.3:56127459-56127478 | MS.gene79321:CDS | 35.0% | |
TGAGGCAAAAGACATTCAAA+GGG | + | chr6.3:56127652-56127671 | MS.gene79321:CDS | 35.0% | |
!! | AATATGAGGAGGTATCACTA+TGG | + | chr6.3:56127921-56127940 | MS.gene79321:CDS | 35.0% |
AAGAAGACTAGGATTTGGCT+AGG | + | chr6.3:56127506-56127525 | MS.gene79321:CDS | 40.0% | |
AATGTCCCCTACACATAGTA+TGG | + | chr6.3:56127862-56127881 | MS.gene79321:CDS | 40.0% | |
AGAAGACTAGGATTTGGCTA+GGG | + | chr6.3:56127507-56127526 | MS.gene79321:CDS | 40.0% | |
ATGCTCCATACTATGTGTAG+GGG | - | chr6.3:56127870-56127889 | None:intergenic | 40.0% | |
CATGCTCCATACTATGTGTA+GGG | - | chr6.3:56127871-56127890 | None:intergenic | 40.0% | |
CTGAGGCAAAAGACATTCAA+AGG | + | chr6.3:56127651-56127670 | MS.gene79321:CDS | 40.0% | |
TAATGACATTGACACGGTTG+TGG | + | chr6.3:56127724-56127743 | MS.gene79321:CDS | 40.0% | |
TCATGCTCCATACTATGTGT+AGG | - | chr6.3:56127872-56127891 | None:intergenic | 40.0% | |
TGAAGTCGAAGAAGAAGAAG+AGG | + | chr6.3:56127799-56127818 | MS.gene79321:CDS | 40.0% | |
TGTTGAATATGCCAGAGTTG+TGG | + | chr6.3:56127825-56127844 | MS.gene79321:CDS | 40.0% | |
TTTACAAGTAACAACGGGGA+GGG | + | chr6.3:56127353-56127372 | MS.gene79321:CDS | 40.0% | |
! | TTGAATGTCTTTTGCCTCAG+CGG | - | chr6.3:56127651-56127670 | None:intergenic | 40.0% |
ACGTTGCAGCAATTGCATTG+AGG | + | chr6.3:56127567-56127586 | MS.gene79321:CDS | 45.0% | |
AGCAGGGAGGAAGAAGTTTA+AGG | + | chr6.3:56127406-56127425 | MS.gene79321:CDS | 45.0% | |
AGTTGCCCAAAAAAACCAGC+AGG | + | chr6.3:56127389-56127408 | MS.gene79321:CDS | 45.0% | |
CGTTGCAGCAATTGCATTGA+GGG | + | chr6.3:56127568-56127587 | MS.gene79321:CDS | 45.0% | |
CTGTCTCAACTTTGCAGACT+CGG | + | chr6.3:56127601-56127620 | MS.gene79321:CDS | 45.0% | |
GGGAACCGAATAAGAAGACT+AGG | + | chr6.3:56127495-56127514 | MS.gene79321:CDS | 45.0% | |
GTTGCAGCAATTGCATTGAG+GGG | + | chr6.3:56127569-56127588 | MS.gene79321:CDS | 45.0% | |
GTTGCCCAAAAAAACCAGCA+GGG | + | chr6.3:56127390-56127409 | MS.gene79321:CDS | 45.0% | |
GTTTACAAGTAACAACGGGG+AGG | + | chr6.3:56127352-56127371 | MS.gene79321:CDS | 45.0% | |
TGAATATGCCAGAGTTGTGG+AGG | + | chr6.3:56127828-56127847 | MS.gene79321:CDS | 45.0% | |
TTAAACTTCTTCCTCCCTGC+TGG | - | chr6.3:56127407-56127426 | None:intergenic | 45.0% | |
TTACAAGTAACAACGGGGAG+GGG | + | chr6.3:56127354-56127373 | MS.gene79321:CDS | 45.0% | |
TTCCTCACACCTCTATACAC+CGG | - | chr6.3:56127443-56127462 | None:intergenic | 45.0% | |
! | TGTATAGAGGTGTGAGGAAG+AGG | + | chr6.3:56127444-56127463 | MS.gene79321:CDS | 45.0% |
!!! | TCCTCCCTGCTGGTTTTTTT+GGG | - | chr6.3:56127397-56127416 | None:intergenic | 45.0% |
!!! | TGGTTTTTTTGGGCAACTCG+CGG | - | chr6.3:56127387-56127406 | None:intergenic | 45.0% |
!!! | TTCCTCCCTGCTGGTTTTTT+TGG | - | chr6.3:56127398-56127417 | None:intergenic | 45.0% |
CAAAGTTGAGACAGGCGTAG+CGG | - | chr6.3:56127595-56127614 | None:intergenic | 50.0% | |
CGAGTCTGCAAAGTTGAGAC+AGG | - | chr6.3:56127603-56127622 | None:intergenic | 50.0% | |
CTTGTCTGGTCTGAAAGCCT+CGG | - | chr6.3:56127693-56127712 | None:intergenic | 50.0% | |
GCCAGAGTTGTGGAGGAATA+TGG | + | chr6.3:56127835-56127854 | MS.gene79321:CDS | 50.0% | |
GCCATATTCCTCCACAACTC+TGG | - | chr6.3:56127839-56127858 | None:intergenic | 50.0% | |
TCCTCACACCTCTATACACC+GGG | - | chr6.3:56127442-56127461 | None:intergenic | 50.0% | |
TGTCGTTGCAGTGGAAGAAG+AGG | + | chr6.3:56127751-56127770 | MS.gene79321:CDS | 50.0% | |
! | AATGTCTTTTGCCTCAGCGG+TGG | - | chr6.3:56127648-56127667 | None:intergenic | 50.0% |
! | GACTTTTGCAACAGCCGAGA+TGG | + | chr6.3:56127529-56127548 | MS.gene79321:CDS | 50.0% |
!! | TCAACTTTGCAGACTCGGTG+TGG | + | chr6.3:56127606-56127625 | MS.gene79321:CDS | 50.0% |
GCCCAAAAAAACCAGCAGGG+AGG | + | chr6.3:56127393-56127412 | MS.gene79321:CDS | 55.0% | |
GTTTAAGGAGACTCGCCACC+CGG | + | chr6.3:56127421-56127440 | MS.gene79321:CDS | 55.0% | |
TCACACCTCTATACACCGGG+TGG | - | chr6.3:56127439-56127458 | None:intergenic | 55.0% | |
TGTGGCTGTTGTCGTTGCAG+TGG | + | chr6.3:56127742-56127761 | MS.gene79321:CDS | 55.0% | |
TTGCTGCAACGTCGTGTGCA+CGG | - | chr6.3:56127559-56127578 | None:intergenic | 55.0% | |
! | ACCCGGTGTATAGAGGTGTG+AGG | + | chr6.3:56127438-56127457 | MS.gene79321:CDS | 55.0% |
!! | ACTTTGCAGACTCGGTGTGG+AGG | + | chr6.3:56127609-56127628 | MS.gene79321:CDS | 55.0% |
ACTCGCCACCCGGTGTATAG+AGG | + | chr6.3:56127431-56127450 | MS.gene79321:CDS | 60.0% | |
CAAGTAACAACGGGGAGGGG+CGG | + | chr6.3:56127357-56127376 | MS.gene79321:CDS | 60.0% | |
TCCTATTCCTGCCACCGCTG+AGG | + | chr6.3:56127634-56127653 | MS.gene79321:CDS | 60.0% | |
TGCTGCAACGTCGTGTGCAC+GGG | - | chr6.3:56127558-56127577 | None:intergenic | 60.0% | |
! | TCTTTTGCCTCAGCGGTGGC+AGG | - | chr6.3:56127644-56127663 | None:intergenic | 60.0% |
GCCTCAGCGGTGGCAGGAAT+AGG | - | chr6.3:56127638-56127657 | None:intergenic | 65.0% | |
GTGTGCACGGGCAGCCATCT+CGG | - | chr6.3:56127546-56127565 | None:intergenic | 65.0% | |
GGCAGCTGCAGAAGCTGCCG+AGG | + | chr6.3:56127673-56127692 | MS.gene79321:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 56127350 | 56127952 | 56127350 | ID=MS.gene79321 |
chr6.3 | mRNA | 56127350 | 56127952 | 56127350 | ID=MS.gene79321.t1;Parent=MS.gene79321 |
chr6.3 | exon | 56127350 | 56127952 | 56127350 | ID=MS.gene79321.t1.exon1;Parent=MS.gene79321.t1 |
chr6.3 | CDS | 56127350 | 56127952 | 56127350 | ID=cds.MS.gene79321.t1;Parent=MS.gene79321.t1 |
Gene Sequence |
Protein sequence |