AlfalfaGEDB | MS.gene79318

M. sativa cultivar XinJiangDaYe / MS.gene79318

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00847.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79318.t1	ABG75914.1	89.3	215	22	1	1	214	1	215	1.40E-101	379

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79318.t1	Q9M0L0	52.1	217	90	6	7	214	5	216	6.8e-44	178.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79318.t1	A8DPG5	89.3	215	22	1	1	214	1	215	1.0e-101	379.0

TFs/TRs:

Gene ID	Type	Classification
MS.gene79318.t1	TF	AP2/ERF-ERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene43297	MS.gene79318	PPI
MS.gene86612	MS.gene79318	PPI
MS.gene86618	MS.gene79318	PPI
MS.gene49251	MS.gene79318	PPI
MS.gene006341	MS.gene79318	PPI
MS.gene30840	MS.gene79318	PPI
MS.gene62758	MS.gene79318	PPI
MS.gene30842	MS.gene79318	PPI
MS.gene49249	MS.gene79318	PPI
MS.gene86599	MS.gene79318	PPI
MS.gene86611	MS.gene79318	PPI
MS.gene86591	MS.gene79318	PPI
MS.gene79318	MS.gene79316	PPI
MS.gene86607	MS.gene79318	PPI
MS.gene30852	MS.gene79318	PPI
MS.gene79322	MS.gene79318	PPI
MS.gene79326	MS.gene79318	PPI
MS.gene79327	MS.gene79318	PPI
MS.gene86594	MS.gene79318	PPI
MS.gene41386	MS.gene79318	PPI
MS.gene79328	MS.gene79318	PPI
MS.gene79314	MS.gene79318	PPI
MS.gene34447	MS.gene79318	PPI
MS.gene49040	MS.gene79318	PPI
MS.gene30841	MS.gene79318	PPI
MS.gene79320	MS.gene79318	PPI
MS.gene49252	MS.gene79318	PPI
MS.gene86597	MS.gene79318	PPI
MS.gene30844	MS.gene79318	PPI
MS.gene30845	MS.gene79318	PPI
MS.gene79318	MS.gene49040	PPI
MS.gene79310	MS.gene79318	PPI
MS.gene30853	MS.gene79318	PPI
MS.gene86595	MS.gene79318	PPI
MS.gene79321	MS.gene79318	PPI
MS.gene43298	MS.gene79318	PPI
MS.gene49253	MS.gene79318	PPI
MS.gene86615	MS.gene79318	PPI
MS.gene79316	MS.gene79318	PPI
MS.gene38658	MS.gene79318	PPI
MS.gene86610	MS.gene79318	PPI
MS.gene86596	MS.gene79318	PPI
MS.gene79315	MS.gene79318	PPI
MS.gene79307	MS.gene79318	PPI
MS.gene86613	MS.gene79318	PPI
MS.gene49250	MS.gene79318	PPI
MS.gene79330	MS.gene79318	PPI
MS.gene86601	MS.gene79318	PPI
MS.gene62760	MS.gene79318	PPI
MS.gene79318	MS.gene30853	PPI
MS.gene86588	MS.gene79318	PPI
MS.gene30851	MS.gene79318	PPI
MS.gene49255	MS.gene79318	PPI
MS.gene30848	MS.gene79318	PPI
MS.gene86608	MS.gene79318	PPI
MS.gene62759	MS.gene79318	PPI
MS.gene79318	MS.gene43297	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79318.t1	MTR_6g465460	89.474	209	21	1	1	208	1	209	1.45e-123	350
MS.gene79318.t1	MTR_6g465450	82.464	211	34	2	1	208	1	211	1.05e-120	342
MS.gene79318.t1	MTR_6g465420	78.571	210	43	1	1	208	1	210	3.11e-113	324
MS.gene79318.t1	MTR_6g465430	80.476	210	39	2	1	208	1	210	3.77e-111	318
MS.gene79318.t1	MTR_6g465690	67.442	215	60	4	1	206	3	216	4.66e-93	273
MS.gene79318.t1	MTR_6g466000	62.679	209	66	3	17	214	20	227	2.89e-91	267
MS.gene79318.t1	MTR_6g465510	70.098	204	44	2	27	214	6	208	5.98e-89	261
MS.gene79318.t1	MTR_6g465530	69.744	195	50	4	27	214	6	198	6.54e-89	260
MS.gene79318.t1	MTR_6g466130	65.969	191	61	2	27	214	39	228	3.46e-80	239
MS.gene79318.t1	MTR_6g465850	47.500	280	80	6	1	214	1	279	3.31e-64	200
MS.gene79318.t1	MTR_6g465990	51.196	209	70	4	17	214	6	193	1.08e-63	196
MS.gene79318.t1	MTR_1g101600	57.447	188	77	2	28	214	15	200	1.79e-63	196
MS.gene79318.t1	MTR_6g466020	54.082	196	62	6	20	211	9	180	4.79e-57	179
MS.gene79318.t1	MTR_5g010940	43.043	230	110	6	1	214	3	227	6.84e-50	162
MS.gene79318.t1	MTR_5g010930	45.854	205	88	7	29	214	24	224	1.72e-49	161
MS.gene79318.t1	MTR_4g102660	52.055	219	84	10	14	214	3	218	4.34e-48	157
MS.gene79318.t1	MTR_5g010910	43.284	201	95	5	30	214	25	222	1.36e-44	148
MS.gene79318.t1	MTR_8g006410	58.242	91	38	0	38	128	36	126	1.93e-32	117
MS.gene79318.t1	MTR_3g110205	59.140	93	38	0	51	143	40	132	1.60e-31	114
MS.gene79318.t1	MTR_7g046260	56.383	94	41	0	35	128	42	135	8.75e-30	110
MS.gene79318.t1	MTR_5g012910	58.252	103	37	1	51	147	25	127	3.54e-29	107
MS.gene79318.t1	MTR_8g013860	62.821	78	29	0	51	128	44	121	2.29e-28	106
MS.gene79318.t1	MTR_2g085015	49.242	132	59	3	6	135	5	130	8.06e-28	105
MS.gene79318.t1	MTR_7g117690	60.000	80	32	0	49	128	23	102	8.95e-28	103
MS.gene79318.t1	MTR_8g102800	50.833	120	56	2	24	142	8	125	2.82e-27	104
MS.gene79318.t1	MTR_2g101340	49.180	122	56	2	34	149	15	136	1.68e-26	101
MS.gene79318.t1	MTR_6g088405	60.256	78	31	0	51	128	41	118	1.75e-26	101
MS.gene79318.t1	MTR_8g027465	47.748	111	51	3	22	128	9	116	3.63e-26	99.8
MS.gene79318.t1	MTR_4g100650	61.538	78	30	0	51	128	71	148	9.17e-26	100
MS.gene79318.t1	MTR_4g035430	52.577	97	41	1	39	135	22	113	2.87e-24	95.9
MS.gene79318.t1	MTR_4g102670	55.128	78	34	1	51	128	12	88	3.61e-23	91.7
MS.gene79318.t1	MTR_6g088425	50.000	122	50	2	24	135	10	130	1.80e-22	91.7
MS.gene79318.t1	MTR_1g006660	60.256	78	31	0	51	128	44	121	5.96e-21	88.2
MS.gene79318.t1	MTR_1g060910	37.209	172	62	7	38	187	3	150	1.18e-18	80.1
MS.gene79318.t1	MTR_5g008590	35.028	177	97	3	54	213	11	186	7.72e-18	78.2
MS.gene79318.t1	MTR_1g014780	41.053	95	49	1	53	140	37	131	5.96e-17	76.6
MS.gene79318.t1	MTR_5g008550	48.837	86	44	0	54	139	21	106	1.72e-16	74.7
MS.gene79318.t1	MTR_3g102100	53.968	63	29	0	47	109	38	100	2.65e-16	73.9
MS.gene79318.t1	MTR_1g014820	42.391	92	49	1	53	140	26	117	3.52e-16	75.1
MS.gene79318.t1	MTR_5g083340	62.500	56	21	0	54	109	85	140	9.79e-16	75.5
MS.gene79318.t1	MTR_3g074130	59.649	57	23	0	53	109	149	205	1.42e-15	74.3
MS.gene79318.t1	MTR_8g090350	55.932	59	26	0	53	111	112	170	1.44e-15	73.9
MS.gene79318.t1	MTR_1g014860	40.000	95	50	1	53	140	21	115	1.54e-15	72.8
MS.gene79318.t1	MTR_5g008470	42.857	84	48	0	56	139	77	160	2.13e-15	71.6
MS.gene79318.t1	MTR_5g062700	59.649	57	23	0	53	109	172	228	2.19e-15	73.9
MS.gene79318.t1	MTR_2g435590	56.140	57	25	0	53	109	95	151	4.09e-15	72.4
MS.gene79318.t1	MTR_2g105380	38.776	98	57	1	12	109	78	172	4.37e-15	73.2
MS.gene79318.t1	MTR_3g106290	57.627	59	25	0	54	112	8	66	5.38e-15	70.9
MS.gene79318.t1	MTR_2g043050	43.529	85	48	0	53	137	18	102	6.16e-15	70.9
MS.gene79318.t1	MTR_2g090235	50.000	70	30	1	45	109	204	273	6.76e-15	72.8
MS.gene79318.t1	MTR_4g008860	57.627	59	25	0	54	112	8	66	7.77e-15	70.5
MS.gene79318.t1	MTR_3g105510	48.571	70	36	0	54	123	37	106	8.05e-15	71.2
MS.gene79318.t1	MTR_1g028560	43.902	82	41	1	54	135	115	191	8.45e-15	72.4
MS.gene79318.t1	MTR_1g019110	57.143	56	24	0	54	109	44	99	9.17e-15	69.7
MS.gene79318.t1	MTR_4g086220	58.929	56	23	0	54	109	96	151	9.23e-15	70.9
MS.gene79318.t1	MTR_2g089170	60.714	56	22	0	54	109	65	120	1.03e-14	70.1
MS.gene79318.t1	MTR_1g014800	54.386	57	26	0	53	109	30	86	1.04e-14	70.5
MS.gene79318.t1	MTR_7g020980	51.613	62	30	0	52	113	49	110	1.15e-14	69.7
MS.gene79318.t1	MTR_7g021010	50.000	70	34	1	45	113	2	71	1.21e-14	68.6
MS.gene79318.t1	MTR_1g090170	56.140	57	25	0	53	109	151	207	1.39e-14	71.6
MS.gene79318.t1	MTR_4g010640	54.237	59	27	0	54	112	7	65	1.54e-14	70.1
MS.gene79318.t1	MTR_4g114570	50.725	69	27	1	54	122	7	68	1.59e-14	70.1
MS.gene79318.t1	MTR_8g092460	53.333	60	28	0	54	113	145	204	1.74e-14	71.2
MS.gene79318.t1	MTR_7g021010	51.613	62	30	0	52	113	49	110	1.94e-14	68.9
MS.gene79318.t1	MTR_1g090170	56.140	57	25	0	53	109	238	294	1.95e-14	71.6
MS.gene79318.t1	MTR_3g053690	55.385	65	26	1	45	109	21	82	2.17e-14	69.7
MS.gene79318.t1	MTR_4g086160	57.143	56	24	0	54	109	96	151	2.32e-14	69.7
MS.gene79318.t1	MTR_2g103700	51.667	60	29	0	54	113	7	66	2.41e-14	68.6
MS.gene79318.t1	MTR_1g087920	45.000	80	42	1	32	109	53	132	2.82e-14	70.5
MS.gene79318.t1	MTR_2g043030	40.659	91	54	0	53	143	18	108	2.94e-14	68.9
MS.gene79318.t1	MTR_4g086190	57.143	56	24	0	54	109	96	151	3.17e-14	69.3
MS.gene79318.t1	MTR_1g101550	38.418	177	90	7	54	214	57	230	3.35e-14	69.3
MS.gene79318.t1	MTR_4g086165	57.143	56	24	0	54	109	82	137	3.74e-14	68.9
MS.gene79318.t1	MTR_5g016750	55.357	56	25	0	54	109	25	80	4.52e-14	68.2
MS.gene79318.t1	MTR_0939s0010	58.929	56	23	0	54	109	65	120	4.85e-14	68.2
MS.gene79318.t1	MTR_2g078680	57.143	56	24	0	54	109	31	86	4.87e-14	68.6
MS.gene79318.t1	MTR_5g082950	58.929	56	23	0	54	109	66	121	5.39e-14	70.1
MS.gene79318.t1	MTR_7g028925	56.140	57	22	1	53	109	28	81	7.26e-14	65.1
MS.gene79318.t1	MTR_7g092190	55.172	58	26	0	54	111	30	87	8.12e-14	68.9
MS.gene79318.t1	MTR_1g048610	54.098	61	27	1	54	113	89	149	9.96e-14	68.2
MS.gene79318.t1	MTR_5g083330	58.929	56	23	0	54	109	35	90	1.05e-13	68.9
MS.gene79318.t1	MTR_2g014340	47.692	65	34	0	54	118	19	83	1.05e-13	67.4
MS.gene79318.t1	MTR_4g078710	36.190	105	57	2	54	156	28	124	1.48e-13	67.4
MS.gene79318.t1	MTR_1g074310	56.140	57	24	1	54	109	21	77	1.78e-13	65.5
MS.gene79318.t1	MTR_3g105480	48.529	68	35	0	56	123	33	100	2.01e-13	67.0
MS.gene79318.t1	MTR_3g090760	31.892	185	106	5	28	207	96	265	2.54e-13	68.2
MS.gene79318.t1	MTR_8g022820	51.786	56	27	0	54	109	123	178	4.26e-13	67.8
MS.gene79318.t1	MTR_8g022820	51.786	56	27	0	54	109	124	179	4.52e-13	67.4
MS.gene79318.t1	MTR_8g022820	51.786	56	27	0	54	109	124	179	4.52e-13	67.4
MS.gene79318.t1	MTR_4g100420	54.098	61	27	1	54	113	157	217	5.94e-13	66.6
MS.gene79318.t1	MTR_1g070070	52.542	59	27	1	54	111	21	79	6.69e-13	63.9
MS.gene79318.t1	MTR_2g015050	47.826	69	35	1	42	109	122	190	8.31e-13	66.2
MS.gene79318.t1	MTR_5g009620	47.887	71	35	1	41	109	97	167	1.32e-12	65.9
MS.gene79318.t1	MTR_4g100450	42.353	85	48	1	30	113	130	214	1.51e-12	65.5
MS.gene79318.t1	MTR_2g438180	56.140	57	24	1	54	109	14	70	1.73e-12	62.8
MS.gene79318.t1	MTR_8g069360	51.724	58	28	0	54	111	44	101	2.09e-12	65.9
MS.gene79318.t1	MTR_5g032820	49.275	69	33	1	54	122	46	112	2.39e-12	65.5
MS.gene79318.t1	MTR_1g074230	56.140	57	24	1	54	109	19	75	2.69e-12	62.4
MS.gene79318.t1	MTR_2g043040	52.632	57	27	0	53	109	18	74	3.38e-12	63.9
MS.gene79318.t1	MTR_8g099215	43.750	80	39	1	36	109	83	162	4.06e-12	64.3
MS.gene79318.t1	MTR_2g014300	55.357	56	25	0	54	109	15	70	4.43e-12	62.4
MS.gene79318.t1	MTR_2g019750	33.871	124	73	2	39	162	37	151	6.09e-12	63.9
MS.gene79318.t1	MTR_3g072610	40.541	111	55	2	39	138	3	113	8.81e-12	62.4
MS.gene79318.t1	MTR_4g054360	38.739	111	59	3	4	113	82	184	9.56e-12	63.2
MS.gene79318.t1	MTR_2g016730	41.975	81	42	1	51	131	20	95	1.09e-11	63.2
MS.gene79318.t1	MTR_7g085810	44.595	74	40	1	54	127	30	102	1.26e-11	62.4
MS.gene79318.t1	MTR_4g054740	37.500	96	53	2	46	140	89	178	2.31e-11	61.6
MS.gene79318.t1	MTR_8g032610	48.333	60	31	0	54	113	27	86	2.42e-11	62.0
MS.gene79318.t1	MTR_2g043020	50.877	57	28	0	53	109	18	74	2.44e-11	60.8
MS.gene79318.t1	MTR_4g119270	41.892	74	41	1	39	112	40	111	3.40e-11	62.0
MS.gene79318.t1	MTR_1g090290	50.877	57	27	1	54	109	113	169	3.74e-11	60.5
MS.gene79318.t1	MTR_1g074250	48.387	62	30	1	50	109	15	76	4.31e-11	58.9
MS.gene79318.t1	MTR_4g088005	52.632	57	26	1	54	109	57	113	4.41e-11	58.5
MS.gene79318.t1	MTR_4g111915	48.214	56	29	0	54	109	53	108	5.04e-11	58.9
MS.gene79318.t1	MTR_7g084370	50.000	58	29	0	54	111	42	99	5.06e-11	61.2
MS.gene79318.t1	MTR_5g085100	39.796	98	48	3	23	119	17	104	6.65e-11	60.8
MS.gene79318.t1	MTR_8g006815	41.892	74	42	1	41	113	83	156	7.17e-11	59.7
MS.gene79318.t1	MTR_5g085070	48.485	66	27	1	54	119	51	109	7.47e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene79318.t1	AT4G25470	54.040	198	76	5	27	214	24	216	1.12e-60	189
MS.gene79318.t1	AT4G25480	52.074	217	90	6	7	214	5	216	1.08e-56	179
MS.gene79318.t1	AT5G51990	43.860	228	85	5	21	214	4	222	2.35e-54	173
MS.gene79318.t1	AT1G63030	45.789	190	94	2	25	214	1	181	4.13e-53	169
MS.gene79318.t1	AT1G63030	45.789	190	94	2	25	214	1	181	4.13e-53	169
MS.gene79318.t1	AT1G12610	57.143	140	54	1	27	166	3	136	5.83e-53	169
MS.gene79318.t1	AT4G25490	54.124	194	72	6	32	214	26	213	3.95e-52	167
MS.gene79318.t1	AT5G25810	49.593	123	55	1	13	135	2	117	1.96e-31	114
MS.gene79318.t1	AT5G11590	57.426	101	40	1	35	135	35	132	1.29e-30	113
MS.gene79318.t1	AT2G44940	63.529	85	31	0	51	135	97	181	2.91e-30	113
MS.gene79318.t1	AT4G32800	57.732	97	35	1	51	141	16	112	3.36e-30	111
MS.gene79318.t1	AT3G16280	64.103	78	28	0	51	128	58	135	7.22e-28	105
MS.gene79318.t1	AT3G16280	64.103	78	28	0	51	128	76	153	9.61e-28	105
MS.gene79318.t1	AT2G35700	61.538	78	30	0	51	128	42	119	3.37e-27	102
MS.gene79318.t1	AT1G01250	58.750	80	33	0	49	128	40	119	1.73e-26	101
MS.gene79318.t1	AT4G16750	56.790	81	35	0	49	129	35	115	5.63e-26	99.4
MS.gene79318.t1	AT3G60490	61.333	75	29	0	54	128	71	145	1.25e-24	97.8
MS.gene79318.t1	AT2G25820	60.526	76	30	0	53	128	25	100	2.98e-24	96.3
MS.gene79318.t1	AT2G36450	39.773	176	90	6	51	214	12	183	6.19e-24	94.4
MS.gene79318.t1	AT1G71450	56.098	82	36	0	53	134	23	104	3.12e-22	89.7
MS.gene79318.t1	AT5G52020	38.728	173	94	4	51	214	62	231	5.87e-22	90.1
MS.gene79318.t1	AT2G47520	44.211	95	49	1	15	109	15	105	3.91e-19	81.3
MS.gene79318.t1	AT1G33760	55.172	87	39	0	54	140	20	106	1.23e-18	80.5
MS.gene79318.t1	AT4G13620	51.316	76	36	1	35	109	212	287	4.66e-18	82.0
MS.gene79318.t1	AT1G77200	58.442	77	32	0	52	128	41	117	6.66e-18	79.7
MS.gene79318.t1	AT4G39780	36.066	122	64	3	49	169	88	196	7.94e-18	80.1
MS.gene79318.t1	AT1G21910	46.739	92	42	1	54	138	50	141	2.09e-17	78.2
MS.gene79318.t1	AT3G11020	58.730	63	26	0	51	113	75	137	3.03e-17	79.0
MS.gene79318.t1	AT1G12630	62.500	72	26	1	52	123	17	87	2.14e-16	74.7
MS.gene79318.t1	AT2G22200	45.455	88	44	1	53	136	70	157	2.89e-16	75.5
MS.gene79318.t1	AT3G16770	51.316	76	30	1	34	109	66	134	3.15e-16	75.1
MS.gene79318.t1	AT1G22190	53.521	71	31	1	39	109	70	138	4.21e-16	75.1
MS.gene79318.t1	AT1G46768	57.143	56	24	0	54	109	31	86	6.38e-16	72.0
MS.gene79318.t1	AT1G74930	41.860	86	50	0	54	139	21	106	6.70e-16	73.2
MS.gene79318.t1	AT4G06746	53.226	62	29	0	54	115	36	97	6.91e-16	72.0
MS.gene79318.t1	AT1G46768	57.143	56	24	0	54	109	31	86	7.32e-16	72.0
MS.gene79318.t1	AT1G46768	57.143	56	24	0	54	109	31	86	7.32e-16	72.0
MS.gene79318.t1	AT5G21960	45.238	84	46	0	52	135	5	88	8.23e-16	73.6
MS.gene79318.t1	AT4G28140	33.113	151	78	4	36	181	120	252	1.14e-15	74.3
MS.gene79318.t1	AT1G78080	59.649	57	23	0	53	109	151	207	1.23e-15	74.7
MS.gene79318.t1	AT1G19210	30.387	181	99	5	54	214	12	185	1.86e-15	72.0
MS.gene79318.t1	AT5G05410	59.322	59	24	0	54	112	79	137	2.33e-15	73.6
MS.gene79318.t1	AT5G05410	59.322	59	24	0	54	112	79	137	3.16e-15	73.6
MS.gene79318.t1	AT1G36060	59.649	57	23	0	53	109	142	198	4.27e-15	72.8
MS.gene79318.t1	AT2G20880	57.895	57	24	0	53	109	186	242	4.44e-15	73.2
MS.gene79318.t1	AT2G33710	50.000	74	32	1	54	122	70	143	4.81e-15	71.6
MS.gene79318.t1	AT2G33710	50.000	74	32	1	54	122	70	143	6.35e-15	71.2
MS.gene79318.t1	AT4G36900	55.357	56	25	0	54	109	30	85	8.45e-15	70.5
MS.gene79318.t1	AT1G15360	57.143	56	24	0	54	109	7	62	1.05e-14	70.1
MS.gene79318.t1	AT1G15360	57.143	56	24	0	54	109	7	62	1.05e-14	70.1
MS.gene79318.t1	AT5G65130	41.667	96	40	2	28	109	73	166	1.36e-14	71.2
MS.gene79318.t1	AT5G65130	41.667	96	40	2	28	109	75	168	1.37e-14	71.2
MS.gene79318.t1	AT2G23340	55.357	56	25	0	54	109	28	83	1.42e-14	69.3
MS.gene79318.t1	AT5G47230	47.059	85	43	2	30	113	133	216	1.46e-14	71.2
MS.gene79318.t1	AT3G50260	51.786	56	27	0	54	109	21	76	1.52e-14	68.6
MS.gene79318.t1	AT5G67190	53.571	56	26	0	54	109	21	76	1.55e-14	69.3
MS.gene79318.t1	AT5G07580	50.685	73	35	1	54	125	110	182	1.87e-14	69.7
MS.gene79318.t1	AT5G25190	49.367	79	37	1	54	132	8	83	2.21e-14	68.9
MS.gene79318.t1	AT5G44210	48.571	70	29	1	54	123	33	95	3.97e-14	68.6
MS.gene79318.t1	AT5G61600	57.377	61	25	1	54	113	88	148	4.12e-14	69.3
MS.gene79318.t1	AT3G15210	57.143	56	24	0	54	109	25	80	5.89e-14	68.6
MS.gene79318.t1	AT5G25390	53.571	56	26	0	54	109	7	62	8.61e-14	67.4
MS.gene79318.t1	AT5G13330	51.667	60	29	0	54	113	39	98	8.78e-14	67.8
MS.gene79318.t1	AT1G71520	40.000	100	43	3	48	137	8	100	9.37e-14	66.2
MS.gene79318.t1	AT3G57600	53.448	58	27	0	54	111	28	85	9.96e-14	68.6
MS.gene79318.t1	AT4G11140	45.205	73	34	1	54	126	87	153	1.09e-13	68.6
MS.gene79318.t1	AT5G61890	53.571	56	26	0	54	109	90	145	1.28e-13	68.2
MS.gene79318.t1	AT4G27950	49.231	65	33	0	54	118	118	182	1.60e-13	68.6
MS.gene79318.t1	AT1G75490	50.000	70	35	0	53	122	41	110	1.61e-13	67.0
MS.gene79318.t1	AT1G22810	33.621	116	61	3	54	167	14	115	1.84e-13	65.5
MS.gene79318.t1	AT4G31060	35.659	129	71	5	54	174	27	151	2.11e-13	66.2
MS.gene79318.t1	AT1G72360	40.449	89	42	2	54	142	25	102	2.81e-13	66.6
MS.gene79318.t1	AT4G17490	44.706	85	46	1	30	113	113	197	3.01e-13	67.4
MS.gene79318.t1	AT5G51190	57.895	57	23	1	54	109	72	128	3.35e-13	66.6
MS.gene79318.t1	AT3G61630	46.667	75	34	1	54	128	105	173	3.44e-13	67.4
MS.gene79318.t1	AT1G72360	34.711	121	68	2	22	142	42	151	3.70e-13	67.0
MS.gene79318.t1	AT5G43410	47.887	71	34	2	40	109	3	71	5.01e-13	63.9
MS.gene79318.t1	AT5G18450	53.968	63	27	1	49	111	31	91	6.04e-13	66.6
MS.gene79318.t1	AT1G72360	40.449	89	42	2	54	142	76	153	6.59e-13	66.2
MS.gene79318.t1	AT5G53290	52.632	57	27	0	54	110	125	181	1.35e-12	66.2
MS.gene79318.t1	AT1G12890	43.210	81	43	1	32	112	2	79	1.60e-12	64.7
MS.gene79318.t1	AT3G23230	54.386	57	25	1	54	109	20	76	2.41e-12	62.4
MS.gene79318.t1	AT5G13910	44.595	74	37	1	54	127	20	89	3.56e-12	63.5
MS.gene79318.t1	AT2G40340	53.571	56	26	0	54	109	14	69	3.72e-12	64.3
MS.gene79318.t1	AT2G40340	53.571	56	26	0	54	109	14	69	3.72e-12	64.3
MS.gene79318.t1	AT2G40340	53.571	56	26	0	54	109	14	69	3.72e-12	64.3
MS.gene79318.t1	AT3G20310	55.172	58	26	0	52	109	25	82	5.22e-12	63.5
MS.gene79318.t1	AT1G24590	48.571	70	31	1	54	123	58	122	5.74e-12	63.9
MS.gene79318.t1	AT1G03800	50.000	56	28	0	54	109	53	108	6.50e-12	63.2
MS.gene79318.t1	AT2G40340	53.571	56	26	0	54	109	72	127	6.58e-12	63.9
MS.gene79318.t1	AT2G40340	53.571	56	26	0	54	109	72	127	7.87e-12	63.9
MS.gene79318.t1	AT2G40340	53.571	56	26	0	54	109	79	134	8.07e-12	63.9
MS.gene79318.t1	AT1G12980	53.448	58	27	0	54	111	57	114	8.15e-12	63.5
MS.gene79318.t1	AT1G28360	55.357	56	25	0	54	109	12	67	8.89e-12	62.0
MS.gene79318.t1	AT1G28370	51.786	56	27	0	54	109	20	75	1.05e-11	61.2
MS.gene79318.t1	AT4G23750	40.909	88	39	2	38	112	93	180	1.12e-11	63.5
MS.gene79318.t1	AT4G23750	40.909	88	39	2	38	112	93	180	1.12e-11	63.5
MS.gene79318.t1	AT1G28370	51.786	56	27	0	54	109	58	113	1.29e-11	62.0
MS.gene79318.t1	AT2G46310	50.000	56	28	0	54	109	99	154	1.45e-11	62.8
MS.gene79318.t1	AT1G28160	50.847	59	29	0	54	112	39	97	1.54e-11	62.4
MS.gene79318.t1	AT5G19790	52.632	57	27	0	54	110	22	78	1.60e-11	62.4
MS.gene79318.t1	AT5G47220	50.820	61	29	1	54	113	117	177	2.24e-11	61.6
MS.gene79318.t1	AT5G18560	43.243	74	41	1	39	112	41	113	2.74e-11	62.4
MS.gene79318.t1	AT1G50640	53.571	56	26	0	54	109	28	83	3.77e-11	60.8
MS.gene79318.t1	AT5G64750	42.857	70	39	1	64	133	195	263	7.81e-11	61.2

Find 60 sgRNAs with CRISPR-Local

Find 69 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCCTCCCTGCTCTCTTCTT+CGG	0.270452	6.3:-56284321	None:intergenic
TCCTCCCTGCTCTCTTCTTC+GGG	0.299122	6.3:-56284320	None:intergenic
ATGGGCTCGGGCTGCCATAT+CGG	0.344047	6.3:-56284469	None:intergenic
TTCCTACTATAACTCATTAC+CGG	0.377606	6.3:+56284269	MS.gene79318:CDS
TGAGGAAATGGAGTGTGAAT+AGG	0.393355	6.3:-56284235	None:intergenic
GTCTGAGTTGTGGAGGAATA+TGG	0.404875	6.3:+56284737	MS.gene79318:CDS
AAAGATATTCAGATCCTTTG+TGG	0.408815	6.3:-56284682	None:intergenic
ATCGAGGAAGTTGCTGGAAT+AGG	0.421748	6.3:-56284561	None:intergenic
GGAAGAGGAACTTAGACAAA+TGG	0.425545	6.3:+56284385	MS.gene79318:CDS
TATCGGTAATCATTATAGTA+TGG	0.428882	6.3:-56284635	None:intergenic
CTATAACTCATTACCGGATT+CGG	0.428938	6.3:+56284275	MS.gene79318:CDS
TTGCAGCAACATCATGGGCT+CGG	0.431723	6.3:-56284482	None:intergenic
CCAACGTGAAGACTAGGATA+TGG	0.434785	6.3:+56284427	MS.gene79318:CDS
CGGGCTGCCATATCGGCTGT+TGG	0.466848	6.3:-56284462	None:intergenic
AGCTACAACAGTCTCAATAT+CGG	0.484335	6.3:-56284652	None:intergenic
TGCAGCAACATCATGGGCTC+GGG	0.490501	6.3:-56284481	None:intergenic
ACTTGCCACCCGGTGTATAG+AGG	0.496097	6.3:+56284357	MS.gene79318:CDS
CATATCCTAGTCTTCACGTT+GGG	0.496229	6.3:-56284426	None:intergenic
ATGCCATTGCAGCAACATCA+TGG	0.498125	6.3:-56284488	None:intergenic
CTGTCTCAATTTCGCATACT+CGG	0.506689	6.3:+56284527	MS.gene79318:CDS
ATGGTCTGGTCTAAAAGCTT+CGG	0.507769	6.3:-56284616	None:intergenic
CTCGATAAAAGATATTCAAA+AGG	0.509288	6.3:+56284578	MS.gene79318:CDS
AAGATGATGAGGTATCACTA+TGG	0.509514	6.3:+56284826	MS.gene79318:CDS
GTAATCATTATAGTATGGTC+TGG	0.512732	6.3:-56284630	None:intergenic
GAAGAGGAACTTAGACAAAT+GGG	0.523345	6.3:+56284386	MS.gene79318:CDS
AGTAACCCGAAGAAGAGAGC+AGG	0.528959	6.3:+56284315	MS.gene79318:CDS
GCTAATCGTATCTCCGAATC+CGG	0.532911	6.3:-56284288	None:intergenic
TGTTGCTGCAATGGCATTGA+GGG	0.537002	6.3:+56284494	MS.gene79318:CDS
GGGAGCCCAACGTGAAGACT+AGG	0.538121	6.3:+56284421	MS.gene79318:CDS
ACCCGGTGTATAGAGGTGTT+AGG	0.539920	6.3:+56284364	MS.gene79318:CDS
AGCTATGCGTAGGGGACATG+AGG	0.541907	6.3:-56284761	None:intergenic
TGTATAGAGGTGTTAGGAAG+AGG	0.541975	6.3:+56284370	MS.gene79318:CDS
TGCCATTGCAGCAACATCAT+GGG	0.543909	6.3:-56284487	None:intergenic
ATCCGGTAATGAGTTATAGT+AGG	0.553057	6.3:-56284271	None:intergenic
AGCCCATGATGTTGCTGCAA+TGG	0.555409	6.3:+56284485	MS.gene79318:CDS
GTCTGGTCTAAAAGCTTCGG+CGG	0.563548	6.3:-56284613	None:intergenic
CATTTGAAAAGCTATGCGTA+GGG	0.563774	6.3:-56284770	None:intergenic
AGCAGGGAGGAAGATATTCA+AGG	0.572499	6.3:+56284332	MS.gene79318:CDS
CAAATGGGTGTGTGAAATGA+GGG	0.573881	6.3:+56284401	MS.gene79318:CDS
TCATTTGAAAAGCTATGCGT+AGG	0.578972	6.3:-56284771	None:intergenic
CGAGTATGCGAAATTGAGAC+AGG	0.583708	6.3:-56284526	None:intergenic
ACAAATGGGTGTGTGAAATG+AGG	0.584388	6.3:+56284400	MS.gene79318:CDS
TCCTAACACCTCTATACACC+GGG	0.586398	6.3:-56284365	None:intergenic
ATGTTGCTGCAATGGCATTG+AGG	0.588097	6.3:+56284493	MS.gene79318:CDS
TTCCTAACACCTCTATACAC+CGG	0.602821	6.3:-56284366	None:intergenic
TGTTAGATATGTCTGAGTTG+TGG	0.614330	6.3:+56284727	MS.gene79318:CDS
GTAACCCGAAGAAGAGAGCA+GGG	0.625383	6.3:+56284316	MS.gene79318:CDS
GTGAAGACTAGGATATGGCT+AGG	0.626407	6.3:+56284432	MS.gene79318:CDS
ATTCAAGGAAACTTGCCACC+CGG	0.635034	6.3:+56284347	MS.gene79318:CDS
GCTATGCGTAGGGGACATGA+GGG	0.637803	6.3:-56284760	None:intergenic
TCAATTTCGCATACTCGGTG+TGG	0.654725	6.3:+56284532	MS.gene79318:CDS
CCATATCCTAGTCTTCACGT+TGG	0.659512	6.3:-56284427	None:intergenic
ATTTCGCATACTCGGTGTGG+CGG	0.660273	6.3:+56284535	MS.gene79318:CDS
TGTAGCTGTCGTCGCCACAA+AGG	0.664697	6.3:+56284668	MS.gene79318:CDS
GGATTCGGAGATACGATTAG+CGG	0.674411	6.3:+56284290	MS.gene79318:CDS
TAGATATGTCTGAGTTGTGG+AGG	0.678753	6.3:+56284730	MS.gene79318:CDS
ATTTGAAAAGCTATGCGTAG+GGG	0.700287	6.3:-56284769	None:intergenic
ACCCGAAGAAGAGAGCAGGG+AGG	0.701611	6.3:+56284319	MS.gene79318:CDS
TAACACCTCTATACACCGGG+TGG	0.716659	6.3:-56284362	None:intergenic
GTTGCTGCAATGGCATTGAG+GGG	0.718595	6.3:+56284495	MS.gene79318:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CTCGATAAAAGATATTCAAA+AGG	+	chr6.3:56284578-56284597	MS.gene79318:CDS	25.0%
!	TATCGGTAATCATTATAGTA+TGG	-	chr6.3:56284638-56284657	None:intergenic	25.0%
!!	CTTTTGAATATCTTTTATCG+AGG	-	chr6.3:56284580-56284599	None:intergenic	25.0%
	AAAGATATTCAGATCCTTTG+TGG	-	chr6.3:56284685-56284704	None:intergenic	30.0%
	GTAATCATTATAGTATGGTC+TGG	-	chr6.3:56284633-56284652	None:intergenic	30.0%
	TTCCTACTATAACTCATTAC+CGG	+	chr6.3:56284269-56284288	MS.gene79318:CDS	30.0%
!	AAGGATCTGAATATCTTTTG+TGG	+	chr6.3:56284687-56284706	MS.gene79318:CDS	30.0%
!	AGGATCTGAATATCTTTTGT+GGG	+	chr6.3:56284688-56284707	MS.gene79318:CDS	30.0%
!!	ACAAGATTTTCAAGATGATG+AGG	+	chr6.3:56284815-56284834	MS.gene79318:CDS	30.0%
	AGCTACAACAGTCTCAATAT+CGG	-	chr6.3:56284655-56284674	None:intergenic	35.0%
	ATCCGGTAATGAGTTATAGT+AGG	-	chr6.3:56284274-56284293	None:intergenic	35.0%
	ATTTGAAAAGCTATGCGTAG+GGG	-	chr6.3:56284772-56284791	None:intergenic	35.0%
	CATTTGAAAAGCTATGCGTA+GGG	-	chr6.3:56284773-56284792	None:intergenic	35.0%
	CTATAACTCATTACCGGATT+CGG	+	chr6.3:56284275-56284294	MS.gene79318:CDS	35.0%
	GAAGAGGAACTTAGACAAAT+GGG	+	chr6.3:56284386-56284405	MS.gene79318:CDS	35.0%
	TCATTTGAAAAGCTATGCGT+AGG	-	chr6.3:56284774-56284793	None:intergenic	35.0%
	TGTTAGATATGTCTGAGTTG+TGG	+	chr6.3:56284727-56284746	MS.gene79318:CDS	35.0%
!	AAGATGATGAGGTATCACTA+TGG	+	chr6.3:56284826-56284845	MS.gene79318:CDS	35.0%
!	GGATCTGAATATCTTTTGTG+GGG	+	chr6.3:56284689-56284708	MS.gene79318:CDS	35.0%
!!	AGAAGATGCTTTTGAGGAAA+TGG	-	chr6.3:56284250-56284269	None:intergenic	35.0%
	ACAAATGGGTGTGTGAAATG+AGG	+	chr6.3:56284400-56284419	MS.gene79318:CDS	40.0%
	ATGGTCTGGTCTAAAAGCTT+CGG	-	chr6.3:56284619-56284638	None:intergenic	40.0%
	CAAATGGGTGTGTGAAATGA+GGG	+	chr6.3:56284401-56284420	MS.gene79318:CDS	40.0%
	CTGTCTCAATTTCGCATACT+CGG	+	chr6.3:56284527-56284546	MS.gene79318:CDS	40.0%
	GGAAGAGGAACTTAGACAAA+TGG	+	chr6.3:56284385-56284404	MS.gene79318:CDS	40.0%
	TAGATATGTCTGAGTTGTGG+AGG	+	chr6.3:56284730-56284749	MS.gene79318:CDS	40.0%
	TGAGGAAATGGAGTGTGAAT+AGG	-	chr6.3:56284238-56284257	None:intergenic	40.0%
	TTCCTAACACCTCTATACAC+CGG	-	chr6.3:56284369-56284388	None:intergenic	40.0%
!	AACTTTTCCAACAGCCGATA+TGG	+	chr6.3:56284455-56284474	MS.gene79318:CDS	40.0%
!	CATATCCTAGTCTTCACGTT+GGG	-	chr6.3:56284429-56284448	None:intergenic	40.0%
!	GTAGGAAGAAGATGCTTTTG+AGG	-	chr6.3:56284256-56284275	None:intergenic	40.0%
!	TCTTTTATCGAGGAAGTTGC+TGG	-	chr6.3:56284570-56284589	None:intergenic	40.0%
!!	TGTATAGAGGTGTTAGGAAG+AGG	+	chr6.3:56284370-56284389	MS.gene79318:CDS	40.0%
	AGCAGGGAGGAAGATATTCA+AGG	+	chr6.3:56284332-56284351	MS.gene79318:CDS	45.0%
	ATCGAGGAAGTTGCTGGAAT+AGG	-	chr6.3:56284564-56284583	None:intergenic	45.0%
	ATGCCATTGCAGCAACATCA+TGG	-	chr6.3:56284491-56284510	None:intergenic	45.0%
	ATGTTGCTGCAATGGCATTG+AGG	+	chr6.3:56284493-56284512	MS.gene79318:CDS	45.0%
	ATTCAAGGAAACTTGCCACC+CGG	+	chr6.3:56284347-56284366	MS.gene79318:CDS	45.0%
	CCAACGTGAAGACTAGGATA+TGG	+	chr6.3:56284427-56284446	MS.gene79318:CDS	45.0%
	CGAGTATGCGAAATTGAGAC+AGG	-	chr6.3:56284529-56284548	None:intergenic	45.0%
	GCTAATCGTATCTCCGAATC+CGG	-	chr6.3:56284291-56284310	None:intergenic	45.0%
	GGATTCGGAGATACGATTAG+CGG	+	chr6.3:56284290-56284309	MS.gene79318:CDS	45.0%
	GTCTGAGTTGTGGAGGAATA+TGG	+	chr6.3:56284737-56284756	MS.gene79318:CDS	45.0%
	GTGAAGACTAGGATATGGCT+AGG	+	chr6.3:56284432-56284451	MS.gene79318:CDS	45.0%
	TCCTAACACCTCTATACACC+GGG	-	chr6.3:56284368-56284387	None:intergenic	45.0%
	TGCCATTGCAGCAACATCAT+GGG	-	chr6.3:56284490-56284509	None:intergenic	45.0%
!	CCATATCCTAGTCTTCACGT+TGG	-	chr6.3:56284430-56284449	None:intergenic	45.0%
!	TCAATTTCGCATACTCGGTG+TGG	+	chr6.3:56284532-56284551	MS.gene79318:CDS	45.0%
!	TGTTGCTGCAATGGCATTGA+GGG	+	chr6.3:56284494-56284513	MS.gene79318:CDS	45.0%
	AGCCCATGATGTTGCTGCAA+TGG	+	chr6.3:56284485-56284504	MS.gene79318:CDS	50.0%
	AGTAACCCGAAGAAGAGAGC+AGG	+	chr6.3:56284315-56284334	MS.gene79318:CDS	50.0%
	GTAACCCGAAGAAGAGAGCA+GGG	+	chr6.3:56284316-56284335	MS.gene79318:CDS	50.0%
	GTCTGGTCTAAAAGCTTCGG+CGG	-	chr6.3:56284616-56284635	None:intergenic	50.0%
	TAACACCTCTATACACCGGG+TGG	-	chr6.3:56284365-56284384	None:intergenic	50.0%
	TTCCTCCCTGCTCTCTTCTT+CGG	-	chr6.3:56284324-56284343	None:intergenic	50.0%
	TTGCAGCAACATCATGGGCT+CGG	-	chr6.3:56284485-56284504	None:intergenic	50.0%
!	GTTGCTGCAATGGCATTGAG+GGG	+	chr6.3:56284495-56284514	MS.gene79318:CDS	50.0%
!!	ACCCGGTGTATAGAGGTGTT+AGG	+	chr6.3:56284364-56284383	MS.gene79318:CDS	50.0%
!!	ATTTCGCATACTCGGTGTGG+CGG	+	chr6.3:56284535-56284554	MS.gene79318:CDS	50.0%
	ACTTGCCACCCGGTGTATAG+AGG	+	chr6.3:56284357-56284376	MS.gene79318:CDS	55.0%
	AGCTATGCGTAGGGGACATG+AGG	-	chr6.3:56284764-56284783	None:intergenic	55.0%
	GCTATGCGTAGGGGACATGA+GGG	-	chr6.3:56284763-56284782	None:intergenic	55.0%
	TCCTCCCTGCTCTCTTCTTC+GGG	-	chr6.3:56284323-56284342	None:intergenic	55.0%
	TGCAGCAACATCATGGGCTC+GGG	-	chr6.3:56284484-56284503	None:intergenic	55.0%
	TGTAGCTGTCGTCGCCACAA+AGG	+	chr6.3:56284668-56284687	MS.gene79318:CDS	55.0%
	ACCCGAAGAAGAGAGCAGGG+AGG	+	chr6.3:56284319-56284338	MS.gene79318:CDS	60.0%
	ATGGGCTCGGGCTGCCATAT+CGG	-	chr6.3:56284472-56284491	None:intergenic	60.0%
	GGGAGCCCAACGTGAAGACT+AGG	+	chr6.3:56284421-56284440	MS.gene79318:CDS	60.0%
!	CGGGCTGCCATATCGGCTGT+TGG	-	chr6.3:56284465-56284484	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.3	gene	56284213	56284857	56284213	ID=MS.gene79318
chr6.3	mRNA	56284213	56284857	56284213	ID=MS.gene79318.t1;Parent=MS.gene79318
chr6.3	exon	56284213	56284857	56284213	ID=MS.gene79318.t1.exon1;Parent=MS.gene79318.t1
chr6.3	CDS	56284213	56284857	56284213	ID=cds.MS.gene79318.t1;Parent=MS.gene79318.t1

Gene Sequence

>MS.gene79318

ATGTTTACTACTAACAACTCTTCCTATTCACACTCCATTTCCTCAAAAGCATCTTCTTCCTACTATAACTCATTACCGGATTCGGAGATACGATTAGCGGCTAGTAACCCGAAGAAGAGAGCAGGGAGGAAGATATTCAAGGAAACTTGCCACCCGGTGTATAGAGGTGTTAGGAAGAGGAACTTAGACAAATGGGTGTGTGAAATGAGGGAGCCCAACGTGAAGACTAGGATATGGCTAGGAACTTTTCCAACAGCCGATATGGCAGCCCGAGCCCATGATGTTGCTGCAATGGCATTGAGGGGACGCTACGCCTGTCTCAATTTCGCATACTCGGTGTGGCGGCTTCCTATTCCAGCAACTTCCTCGATAAAAGATATTCAAAAGGCAGCAACAAAAGCCGCCGAAGCTTTTAGACCAGACCATACTATAATGATTACCGATATTGAGACTGTTGTAGCTGTCGTCGCCACAAAGGATCTGAATATCTTTTGTGGGGAAGAAGAGCATGAAATGTTAGATATGTCTGAGTTGTGGAGGAATATGGCCCTCATGTCCCCTACGCATAGCTTTTCAAATGATCATTATGAAGATATTCAAGCACAAGATTTTCAAGATGATGAGGTATCACTATGGAACTATTAA

Protein sequence

>MS.gene79318.t1

MFTTNNSSYSHSISSKASSSYYNSLPDSEIRLAASNPKKRAGRKIFKETCHPVYRGVRKRNLDKWVCEMREPNVKTRIWLGTFPTADMAARAHDVAAMALRGRYACLNFAYSVWRLPIPATSSIKDIQKAATKAAEAFRPDHTIMITDIETVVAVVATKDLNIFCGEEEHEMLDMSELWRNMALMSPTHSFSNDHYEDIQAQDFQDDEVSLWNY