AlfalfaGEDB | MS.gene86595

M. sativa cultivar XinJiangDaYe / MS.gene86595

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00847.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene86595.t1	ABV22882.2	89.9	217	19	2	1	215	1	216	7.10E-101	376.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene86595.t1	Q9M0L0	56.2	192	72	4	32	215	29	216	1.0e-47	191.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene86595.t1	B5KKL4	89.9	217	19	2	1	215	1	216	5.1e-101	376.7

TFs/TRs:

Gene ID	Type	Classification
MS.gene86595.t1	TF	AP2/ERF-ERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene79315	MS.gene86595	PPI
MS.gene86613	MS.gene86595	PPI
MS.gene49250	MS.gene86595	PPI
MS.gene86595	MS.gene62759	PPI
MS.gene86599	MS.gene86595	PPI
MS.gene86595	MS.gene79307	PPI
MS.gene86595	MS.gene49251	PPI
MS.gene86595	MS.gene86607	PPI
MS.gene62760	MS.gene86595	PPI
MS.gene30852	MS.gene86595	PPI
MS.gene79322	MS.gene86595	PPI
MS.gene86608	MS.gene86595	PPI
MS.gene79326	MS.gene86595	PPI
MS.gene86595	MS.gene49252	PPI
MS.gene79327	MS.gene86595	PPI
MS.gene86618	MS.gene86595	PPI
MS.gene49251	MS.gene86595	PPI
MS.gene006341	MS.gene86595	PPI
MS.gene86595	MS.gene30840	PPI
MS.gene49249	MS.gene86595	PPI
MS.gene86611	MS.gene86595	PPI
MS.gene86595	MS.gene86601	PPI
MS.gene34447	MS.gene86595	PPI
MS.gene86595	MS.gene86591	PPI
MS.gene86594	MS.gene86595	PPI
MS.gene41386	MS.gene86595	PPI
MS.gene86595	MS.gene30853	PPI
MS.gene79314	MS.gene86595	PPI
MS.gene86595	MS.gene43297	PPI
MS.gene86595	MS.gene86596	PPI
MS.gene86595	MS.gene30844	PPI
MS.gene43298	MS.gene86595	PPI
MS.gene49253	MS.gene86595	PPI
MS.gene86595	MS.gene79314	PPI
MS.gene30841	MS.gene86595	PPI
MS.gene86595	MS.gene79318	PPI
MS.gene38658	MS.gene86595	PPI
MS.gene86595	MS.gene79320	PPI
MS.gene86597	MS.gene86595	PPI
MS.gene30844	MS.gene86595	PPI
MS.gene86610	MS.gene86595	PPI
MS.gene86595	MS.gene79316	PPI
MS.gene30845	MS.gene86595	PPI
MS.gene86595	MS.gene79328	PPI
MS.gene86595	MS.gene79321	PPI
MS.gene79330	MS.gene86595	PPI
MS.gene86588	MS.gene86595	PPI
MS.gene86595	MS.gene49040	PPI
MS.gene30851	MS.gene86595	PPI
MS.gene49255	MS.gene86595	PPI
MS.gene30848	MS.gene86595	PPI
MS.gene86615	MS.gene86595	PPI
MS.gene86595	MS.gene86612	PPI
MS.gene86595	MS.gene49253	PPI
MS.gene86596	MS.gene86595	PPI
MS.gene86595	MS.gene79310	PPI
MS.gene62758	MS.gene86595	PPI
MS.gene30842	MS.gene86595	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene86595.t1	MTR_6g465450	91.469	211	16	1	1	209	1	211	1.08e-136	383
MS.gene86595.t1	MTR_6g465460	86.124	209	29	0	1	209	1	209	6.91e-126	357
MS.gene86595.t1	MTR_6g465430	84.286	210	32	1	1	209	1	210	3.80e-124	351
MS.gene86595.t1	MTR_6g465420	82.464	211	34	2	1	209	1	210	3.69e-123	349
MS.gene86595.t1	MTR_6g465690	73.023	215	48	3	2	207	3	216	1.17e-103	300
MS.gene86595.t1	MTR_6g466000	69.524	210	51	4	17	215	20	227	8.97e-100	289
MS.gene86595.t1	MTR_6g465530	75.510	196	38	4	27	215	6	198	1.60e-97	282
MS.gene86595.t1	MTR_6g465510	76.098	205	31	2	27	215	6	208	7.75e-97	281
MS.gene86595.t1	MTR_6g466130	71.357	199	52	2	20	215	32	228	5.22e-92	269
MS.gene86595.t1	MTR_1g101600	59.204	201	74	3	18	215	5	200	3.74e-71	215
MS.gene86595.t1	MTR_6g465990	59.048	210	53	5	17	215	6	193	5.04e-71	214
MS.gene86595.t1	MTR_6g465850	53.150	254	60	4	19	215	28	279	1.69e-68	211
MS.gene86595.t1	MTR_6g466020	54.229	201	60	4	23	212	1	180	5.91e-61	189
MS.gene86595.t1	MTR_5g010930	47.783	203	88	4	29	215	24	224	3.65e-55	176
MS.gene86595.t1	MTR_4g102660	53.211	218	84	10	14	215	3	218	1.75e-53	171
MS.gene86595.t1	MTR_5g010940	45.909	220	96	6	12	215	15	227	1.06e-51	167
MS.gene86595.t1	MTR_5g010910	46.305	203	88	6	30	215	24	222	1.47e-48	159
MS.gene86595.t1	MTR_8g006410	57.143	91	39	0	38	128	36	126	2.06e-32	116
MS.gene86595.t1	MTR_3g110205	54.455	101	46	0	43	143	32	132	8.86e-32	114
MS.gene86595.t1	MTR_7g117690	53.846	104	41	2	25	128	6	102	2.48e-31	112
MS.gene86595.t1	MTR_7g046260	53.398	103	46	1	28	128	33	135	9.84e-31	113
MS.gene86595.t1	MTR_2g085015	58.889	90	35	2	48	135	41	130	6.71e-30	110
MS.gene86595.t1	MTR_5g012910	60.759	79	31	0	50	128	24	102	1.43e-29	108
MS.gene86595.t1	MTR_8g027465	50.459	109	47	3	24	128	11	116	1.98e-28	105
MS.gene86595.t1	MTR_8g013860	62.025	79	30	0	50	128	43	121	3.39e-28	105
MS.gene86595.t1	MTR_8g102800	52.381	105	48	1	38	142	23	125	3.03e-27	104
MS.gene86595.t1	MTR_2g101340	50.495	101	44	1	34	128	15	115	4.73e-27	102
MS.gene86595.t1	MTR_6g088405	58.974	78	32	0	51	128	41	118	9.81e-27	102
MS.gene86595.t1	MTR_4g100650	57.692	78	33	0	51	128	71	148	1.20e-24	97.8
MS.gene86595.t1	MTR_4g102670	54.430	79	35	1	50	128	11	88	3.72e-24	94.4
MS.gene86595.t1	MTR_4g035430	50.515	97	43	1	39	135	22	113	1.24e-23	94.4
MS.gene86595.t1	MTR_5g008590	37.569	181	88	4	54	214	11	186	3.00e-23	92.4
MS.gene86595.t1	MTR_6g088425	48.361	122	52	2	24	135	10	130	9.06e-23	92.4
MS.gene86595.t1	MTR_1g006660	59.494	79	32	0	50	128	43	121	1.20e-20	87.4
MS.gene86595.t1	MTR_1g014780	35.766	137	68	3	15	140	4	131	3.49e-19	82.8
MS.gene86595.t1	MTR_5g008550	44.554	101	54	1	54	152	21	121	4.55e-19	81.6
MS.gene86595.t1	MTR_5g008470	37.143	105	66	0	56	160	77	181	1.62e-17	77.4
MS.gene86595.t1	MTR_3g105510	45.882	85	46	0	54	138	37	121	3.54e-17	77.8
MS.gene86595.t1	MTR_2g435590	53.030	66	31	0	47	112	89	154	6.55e-17	77.0
MS.gene86595.t1	MTR_3g102100	36.220	127	75	3	54	177	45	168	7.29e-17	75.5
MS.gene86595.t1	MTR_1g087920	40.000	120	70	1	6	123	27	146	7.41e-17	77.8
MS.gene86595.t1	MTR_1g014820	42.391	92	49	1	53	140	26	117	8.11e-17	77.0
MS.gene86595.t1	MTR_1g014860	41.053	95	49	1	53	140	21	115	1.26e-16	75.9
MS.gene86595.t1	MTR_3g074130	51.351	74	34	1	38	111	136	207	1.32e-16	77.4
MS.gene86595.t1	MTR_2g105380	41.837	98	54	1	12	109	78	172	1.53e-16	77.4
MS.gene86595.t1	MTR_5g083340	60.345	58	23	0	54	111	85	142	1.79e-16	77.4
MS.gene86595.t1	MTR_8g090350	38.843	121	67	3	53	167	112	231	3.81e-16	75.5
MS.gene86595.t1	MTR_2g043050	45.882	85	46	0	53	137	18	102	4.06e-16	74.3
MS.gene86595.t1	MTR_1g090170	55.738	61	27	0	49	109	147	207	4.26e-16	75.9
MS.gene86595.t1	MTR_1g060910	35.260	173	64	8	38	187	3	150	5.86e-16	72.8
MS.gene86595.t1	MTR_5g062700	57.627	59	25	0	53	111	172	230	6.01e-16	75.9
MS.gene86595.t1	MTR_1g090170	53.968	63	29	0	49	111	234	296	6.53e-16	75.9
MS.gene86595.t1	MTR_7g021010	50.000	70	34	1	45	113	2	71	8.18e-16	71.6
MS.gene86595.t1	MTR_1g014800	53.333	60	28	0	53	112	30	89	8.70e-16	73.6
MS.gene86595.t1	MTR_3g105480	45.783	83	45	0	56	138	33	115	1.24e-15	73.2
MS.gene86595.t1	MTR_2g090235	57.627	59	25	0	53	111	217	275	1.37e-15	75.1
MS.gene86595.t1	MTR_8g022820	44.304	79	41	1	47	125	116	191	1.37e-15	74.7
MS.gene86595.t1	MTR_8g022820	44.304	79	41	1	47	125	117	192	1.37e-15	74.7
MS.gene86595.t1	MTR_8g022820	44.304	79	41	1	47	125	117	192	1.37e-15	74.7
MS.gene86595.t1	MTR_7g020980	50.000	64	32	0	50	113	47	110	1.76e-15	71.6
MS.gene86595.t1	MTR_1g101550	40.426	141	72	3	54	183	57	196	1.78e-15	72.8
MS.gene86595.t1	MTR_2g043030	41.758	91	53	0	53	143	18	108	2.10e-15	72.0
MS.gene86595.t1	MTR_3g053690	56.923	65	25	1	45	109	21	82	2.77e-15	72.0
MS.gene86595.t1	MTR_7g021010	42.697	89	50	1	45	132	41	129	3.45e-15	70.9
MS.gene86595.t1	MTR_1g028560	56.140	57	25	0	54	110	115	171	3.77e-15	73.2
MS.gene86595.t1	MTR_2g078680	50.000	76	35	1	34	109	14	86	4.82e-15	71.2
MS.gene86595.t1	MTR_7g028925	55.000	60	24	1	53	112	28	84	5.47e-15	68.2
MS.gene86595.t1	MTR_4g114570	51.429	70	27	1	54	123	7	69	5.56e-15	71.2
MS.gene86595.t1	MTR_8g092460	53.333	60	28	0	54	113	145	204	5.90e-15	72.4
MS.gene86595.t1	MTR_4g086220	58.929	56	23	0	54	109	96	151	6.60e-15	71.2
MS.gene86595.t1	MTR_1g019110	50.000	62	31	0	54	115	44	105	6.73e-15	70.1
MS.gene86595.t1	MTR_5g083330	49.315	73	37	0	39	111	20	92	9.72e-15	71.6
MS.gene86595.t1	MTR_4g010640	57.143	56	24	0	54	109	7	62	1.18e-14	70.1
MS.gene86595.t1	MTR_2g089170	58.929	56	23	0	54	109	65	120	1.95e-14	69.3
MS.gene86595.t1	MTR_4g008860	60.714	56	22	0	54	109	8	63	2.24e-14	69.3
MS.gene86595.t1	MTR_3g106290	60.714	56	22	0	54	109	8	63	2.30e-14	68.9
MS.gene86595.t1	MTR_2g103700	53.333	60	28	0	54	113	7	66	2.39e-14	68.6
MS.gene86595.t1	MTR_4g086160	57.143	56	24	0	54	109	96	151	2.44e-14	69.7
MS.gene86595.t1	MTR_4g086190	57.143	56	24	0	54	109	96	151	2.59e-14	69.7
MS.gene86595.t1	MTR_4g078710	36.893	103	59	1	54	156	28	124	3.00e-14	69.3
MS.gene86595.t1	MTR_5g082950	58.929	56	23	0	54	109	66	121	3.45e-14	70.5
MS.gene86595.t1	MTR_4g086165	57.143	56	24	0	54	109	82	137	3.63e-14	68.9
MS.gene86595.t1	MTR_5g016750	53.571	56	26	0	54	109	25	80	4.85e-14	68.2
MS.gene86595.t1	MTR_0939s0010	57.143	56	24	0	54	109	65	120	6.19e-14	68.2
MS.gene86595.t1	MTR_1g048610	39.604	101	58	2	10	109	47	145	6.92e-14	68.6
MS.gene86595.t1	MTR_7g092190	57.143	56	24	0	54	109	30	85	8.45e-14	68.9
MS.gene86595.t1	MTR_5g009620	50.667	75	27	2	41	109	97	167	9.02e-14	69.3
MS.gene86595.t1	MTR_1g074310	51.613	62	29	1	54	114	21	82	1.01e-13	66.2
MS.gene86595.t1	MTR_2g014340	55.357	56	25	0	54	109	19	74	1.34e-13	67.0
MS.gene86595.t1	MTR_8g099215	46.250	80	37	1	36	109	83	162	1.72e-13	68.6
MS.gene86595.t1	MTR_2g438180	53.226	62	28	1	54	114	14	75	2.34e-13	65.1
MS.gene86595.t1	MTR_3g090760	39.623	106	54	2	30	134	98	194	2.37e-13	68.2
MS.gene86595.t1	MTR_7g085810	29.487	156	92	3	54	192	30	184	4.02e-13	66.6
MS.gene86595.t1	MTR_2g015050	54.386	57	25	1	54	109	134	190	4.12e-13	67.0
MS.gene86595.t1	MTR_2g014300	57.143	56	24	0	54	109	15	70	5.53e-13	65.1
MS.gene86595.t1	MTR_2g043040	41.176	85	50	0	53	137	18	102	6.27e-13	65.9
MS.gene86595.t1	MTR_2g043020	39.560	91	55	0	53	143	18	108	6.35e-13	65.5
MS.gene86595.t1	MTR_5g085100	40.187	107	46	3	13	119	16	104	6.81e-13	66.2
MS.gene86595.t1	MTR_1g070070	54.386	57	25	1	54	109	21	77	7.79e-13	63.9
MS.gene86595.t1	MTR_4g100450	35.833	120	67	2	4	113	95	214	8.69e-13	66.2
MS.gene86595.t1	MTR_8g069360	53.571	56	26	0	54	109	44	99	1.01e-12	66.6
MS.gene86595.t1	MTR_2g016730	42.683	82	42	1	51	132	20	96	1.55e-12	65.9
MS.gene86595.t1	MTR_1g074230	56.140	57	24	1	54	109	19	75	1.85e-12	62.8
MS.gene86595.t1	MTR_4g100420	50.746	67	30	2	48	113	153	217	2.99e-12	64.7
MS.gene86595.t1	MTR_4g054360	48.529	68	34	1	47	113	117	184	3.50e-12	64.3
MS.gene86595.t1	MTR_5g032820	55.357	56	25	0	54	109	46	101	3.51e-12	65.1
MS.gene86595.t1	MTR_4g111915	47.458	59	31	0	54	112	53	111	4.44e-12	61.6
MS.gene86595.t1	MTR_3g072610	41.441	111	54	2	39	138	3	113	5.89e-12	63.2
MS.gene86595.t1	MTR_5g085070	49.315	73	27	2	47	119	47	109	7.09e-12	63.5
MS.gene86595.t1	MTR_5g075570	48.333	60	31	0	50	109	120	179	9.16e-12	63.2
MS.gene86595.t1	MTR_4g054740	47.059	68	35	1	47	113	90	157	1.04e-11	62.8
MS.gene86595.t1	MTR_5g008790	39.080	87	48	2	54	135	18	104	1.16e-11	61.2
MS.gene86595.t1	MTR_6g041970	39.535	86	39	1	54	139	18	90	1.21e-11	59.7
MS.gene86595.t1	MTR_8g085960	36.957	92	54	3	38	127	10	99	1.22e-11	62.4
MS.gene86595.t1	MTR_4g088005	48.438	64	32	1	47	109	50	113	1.32e-11	60.1
MS.gene86595.t1	MTR_8g032610	50.000	60	30	0	54	113	27	86	1.43e-11	62.8
MS.gene86595.t1	MTR_4g112490	47.458	59	31	0	54	112	53	111	1.62e-11	61.6
MS.gene86595.t1	MTR_4g119270	44.444	72	37	1	38	109	40	108	1.83e-11	62.8
MS.gene86595.t1	MTR_7g084370	53.571	56	26	0	54	109	42	97	1.93e-11	62.4
MS.gene86595.t1	MTR_5g008540	45.902	61	33	0	56	116	26	86	1.97e-11	58.9
MS.gene86595.t1	MTR_1g090290	50.000	62	28	2	49	109	110	169	2.10e-11	61.2
MS.gene86595.t1	MTR_2g019750	43.662	71	38	1	39	109	37	105	2.99e-11	62.0
MS.gene86595.t1	MTR_6g029180	41.573	89	50	2	39	127	19	105	3.20e-11	62.0
MS.gene86595.t1	MTR_1g074250	49.180	61	29	1	51	109	16	76	3.80e-11	58.9
MS.gene86595.t1	MTR_4g054860	44.928	69	37	1	46	113	123	191	6.41e-11	60.8
MS.gene86595.t1	MTR_6g012970	51.786	56	27	0	54	109	38	93	6.43e-11	61.2
MS.gene86595.t1	MTR_8g006840	50.877	57	27	1	54	109	125	181	6.55e-11	59.7
MS.gene86595.t1	MTR_1g097190	43.662	71	34	1	32	102	7	71	7.63e-11	58.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene86595.t1	AT4G25470	54.592	196	71	4	31	215	28	216	2.10e-62	194
MS.gene86595.t1	AT5G51990	51.759	199	75	5	31	215	31	222	1.65e-59	186
MS.gene86595.t1	AT4G25480	56.250	192	72	4	32	215	29	216	2.22e-59	186
MS.gene86595.t1	AT4G25490	50.704	213	91	5	12	215	6	213	1.27e-55	176
MS.gene86595.t1	AT1G63030	48.168	191	85	5	27	215	3	181	1.73e-55	175
MS.gene86595.t1	AT1G63030	48.168	191	85	5	27	215	3	181	1.73e-55	175
MS.gene86595.t1	AT1G12610	68.421	114	36	0	27	140	3	116	4.79e-55	174
MS.gene86595.t1	AT5G25810	48.780	123	56	1	13	135	2	117	2.59e-32	117
MS.gene86595.t1	AT2G44940	59.140	93	38	0	43	135	89	181	2.19e-30	114
MS.gene86595.t1	AT5G11590	54.455	101	43	1	35	135	35	132	6.58e-30	111
MS.gene86595.t1	AT2G35700	47.015	134	70	1	49	182	40	172	2.61e-29	108
MS.gene86595.t1	AT4G32800	54.082	98	39	1	50	141	15	112	4.97e-29	108
MS.gene86595.t1	AT1G01250	60.000	80	32	0	49	128	40	119	2.31e-28	105
MS.gene86595.t1	AT2G36450	41.477	176	90	5	50	215	11	183	6.95e-28	104
MS.gene86595.t1	AT4G16750	56.790	81	35	0	49	129	35	115	3.76e-27	102
MS.gene86595.t1	AT3G16280	39.459	185	86	5	50	215	57	234	3.88e-27	103
MS.gene86595.t1	AT3G16280	39.459	185	86	5	50	215	75	252	6.34e-27	103
MS.gene86595.t1	AT3G60490	52.747	91	42	1	39	128	55	145	2.65e-25	99.8
MS.gene86595.t1	AT2G25820	59.211	76	31	0	53	128	25	100	1.81e-24	96.7
MS.gene86595.t1	AT1G71450	57.317	82	35	0	53	134	23	104	1.65e-23	93.2
MS.gene86595.t1	AT5G52020	39.011	182	84	7	50	215	61	231	2.69e-20	85.9
MS.gene86595.t1	AT1G33760	52.809	89	42	0	54	142	20	108	5.74e-19	81.3
MS.gene86595.t1	AT4G13620	51.282	78	37	1	35	111	212	289	5.93e-19	84.3
MS.gene86595.t1	AT2G47520	51.515	66	32	0	47	112	43	108	1.72e-18	79.7
MS.gene86595.t1	AT5G21960	29.717	212	101	5	52	215	5	216	3.32e-18	80.1
MS.gene86595.t1	AT1G77200	57.143	77	33	0	52	128	41	117	6.34e-18	79.7
MS.gene86595.t1	AT1G21910	46.739	92	42	1	54	138	50	141	6.79e-18	79.3
MS.gene86595.t1	AT1G22190	53.425	73	32	1	39	111	70	140	7.26e-18	79.7
MS.gene86595.t1	AT4G39780	57.377	61	26	0	49	109	88	148	1.82e-17	79.0
MS.gene86595.t1	AT2G22200	45.455	88	44	1	53	136	70	157	2.42e-17	78.6
MS.gene86595.t1	AT1G19210	31.111	180	100	4	54	215	12	185	4.04e-17	76.3
MS.gene86595.t1	AT1G46768	55.556	63	27	1	49	111	27	88	5.23e-17	75.1
MS.gene86595.t1	AT1G46768	55.556	63	27	1	49	111	27	88	5.23e-17	75.1
MS.gene86595.t1	AT1G74930	44.186	86	48	0	54	139	21	106	5.30e-17	76.3
MS.gene86595.t1	AT1G46768	55.556	63	27	1	49	111	27	88	5.48e-17	74.7
MS.gene86595.t1	AT3G11020	58.730	63	26	0	51	113	75	137	6.87e-17	78.2
MS.gene86595.t1	AT3G16770	51.282	78	31	1	34	111	66	136	7.05e-17	77.0
MS.gene86595.t1	AT1G12630	60.274	73	28	1	50	122	15	86	1.65e-16	74.7
MS.gene86595.t1	AT4G06746	51.613	62	30	0	54	115	36	97	1.99e-16	73.6
MS.gene86595.t1	AT1G78080	57.627	59	25	0	53	111	151	209	4.18e-16	75.9
MS.gene86595.t1	AT2G33710	48.101	79	36	1	49	122	65	143	6.73e-16	73.9
MS.gene86595.t1	AT2G33710	48.101	79	36	1	49	122	65	143	9.17e-16	73.6
MS.gene86595.t1	AT4G28140	54.237	59	27	0	53	111	142	200	1.05e-15	74.3
MS.gene86595.t1	AT5G67190	36.364	121	67	3	54	174	21	131	1.13e-15	72.4
MS.gene86595.t1	AT2G20880	46.341	82	42	1	30	111	165	244	1.33e-15	74.7
MS.gene86595.t1	AT5G65130	55.738	61	27	0	53	113	110	170	1.49e-15	73.9
MS.gene86595.t1	AT5G65130	55.738	61	27	0	53	113	112	172	1.55e-15	73.9
MS.gene86595.t1	AT3G50260	37.273	110	57	2	47	156	14	111	2.17e-15	70.9
MS.gene86595.t1	AT1G71520	41.667	96	47	2	48	137	8	100	2.32e-15	70.5
MS.gene86595.t1	AT4G36900	53.333	60	28	0	50	109	26	85	2.41e-15	72.0
MS.gene86595.t1	AT1G36060	59.649	57	23	0	53	109	142	198	2.44e-15	73.6
MS.gene86595.t1	AT5G05410	57.627	59	25	0	54	112	79	137	3.76e-15	73.2
MS.gene86595.t1	AT1G15360	58.929	56	23	0	54	109	7	62	4.81e-15	71.2
MS.gene86595.t1	AT1G15360	58.929	56	23	0	54	109	7	62	4.81e-15	71.2
MS.gene86595.t1	AT2G23340	55.357	56	25	0	54	109	28	83	4.93e-15	70.5
MS.gene86595.t1	AT5G05410	57.627	59	25	0	54	112	79	137	4.97e-15	72.8
MS.gene86595.t1	AT5G47230	32.544	169	102	5	30	193	133	294	7.94e-15	72.0
MS.gene86595.t1	AT3G15210	57.143	63	24	1	47	109	21	80	9.44e-15	70.9
MS.gene86595.t1	AT5G44210	50.725	69	27	1	54	122	33	94	1.14e-14	70.1
MS.gene86595.t1	AT3G61630	46.835	79	36	1	54	132	105	177	1.26e-14	71.6
MS.gene86595.t1	AT1G22810	39.785	93	41	2	54	138	14	99	1.40e-14	68.6
MS.gene86595.t1	AT5G61890	40.952	105	53	3	9	113	54	149	1.46e-14	70.9
MS.gene86595.t1	AT5G13330	51.562	64	29	1	50	113	37	98	1.81e-14	69.7
MS.gene86595.t1	AT4G31060	53.571	56	26	0	54	109	27	82	2.47e-14	68.9
MS.gene86595.t1	AT4G27950	56.140	57	25	0	54	110	118	174	3.28e-14	70.5
MS.gene86595.t1	AT5G25390	55.357	56	25	0	54	109	7	62	3.67e-14	68.6
MS.gene86595.t1	AT3G57600	55.357	56	25	0	54	109	28	83	6.44e-14	69.3
MS.gene86595.t1	AT1G75490	48.571	70	36	0	53	122	41	110	7.22e-14	68.2
MS.gene86595.t1	AT5G07580	48.101	79	38	2	48	125	106	182	9.08e-14	67.8
MS.gene86595.t1	AT5G25190	58.929	56	23	0	54	109	8	63	1.16e-13	67.0
MS.gene86595.t1	AT5G61600	57.377	61	23	2	50	109	86	144	1.21e-13	68.2
MS.gene86595.t1	AT5G53290	42.045	88	50	1	23	110	95	181	1.24e-13	68.9
MS.gene86595.t1	AT1G12890	46.154	78	39	1	32	109	2	76	1.43e-13	67.4
MS.gene86595.t1	AT4G11140	45.205	73	34	1	54	126	87	153	1.50e-13	68.6
MS.gene86595.t1	AT5G43410	47.887	71	34	2	40	109	3	71	2.09e-13	65.1
MS.gene86595.t1	AT1G72360	46.032	63	34	0	47	109	18	80	2.27e-13	66.6
MS.gene86595.t1	AT5G51190	53.968	63	26	2	48	109	68	128	3.15e-13	66.6
MS.gene86595.t1	AT1G72360	42.105	76	44	0	34	109	54	129	3.49e-13	67.0
MS.gene86595.t1	AT1G03800	48.529	68	32	1	42	109	44	108	3.57e-13	66.6
MS.gene86595.t1	AT4G17490	39.252	107	58	4	12	113	93	197	3.74e-13	67.0
MS.gene86595.t1	AT1G72360	46.032	63	34	0	47	109	69	131	5.19e-13	66.6
MS.gene86595.t1	AT3G23230	50.000	62	30	1	54	114	20	81	5.48e-13	64.3
MS.gene86595.t1	AT2G46310	51.786	56	27	0	54	109	99	154	1.09e-12	65.9
MS.gene86595.t1	AT3G20310	51.613	62	30	0	48	109	21	82	1.36e-12	65.1
MS.gene86595.t1	AT1G28360	53.333	60	28	0	54	113	12	71	1.41e-12	64.3
MS.gene86595.t1	AT1G28370	53.571	56	26	0	54	109	20	75	1.42e-12	63.9
MS.gene86595.t1	AT5G64750	36.957	92	52	2	64	155	195	280	1.49e-12	66.2
MS.gene86595.t1	AT1G28370	53.571	56	26	0	54	109	58	113	1.86e-12	64.3
MS.gene86595.t1	AT5G19790	53.448	58	27	0	54	111	22	79	2.32e-12	64.7
MS.gene86595.t1	AT5G18450	54.386	57	26	0	53	109	33	89	2.87e-12	65.1
MS.gene86595.t1	AT2G40340	51.786	56	27	0	54	109	14	69	3.47e-12	64.3
MS.gene86595.t1	AT2G40340	51.786	56	27	0	54	109	14	69	3.47e-12	64.3
MS.gene86595.t1	AT2G40340	51.786	56	27	0	54	109	14	69	3.47e-12	64.3
MS.gene86595.t1	AT1G50640	53.968	63	26	1	47	109	24	83	5.17e-12	63.2
MS.gene86595.t1	AT4G23750	50.877	57	28	0	54	110	122	178	5.25e-12	64.3
MS.gene86595.t1	AT4G23750	50.877	57	28	0	54	110	122	178	5.25e-12	64.3
MS.gene86595.t1	AT2G40340	51.786	56	27	0	54	109	72	127	6.15e-12	63.9
MS.gene86595.t1	AT1G24590	51.562	64	28	1	54	117	58	118	6.77e-12	63.9
MS.gene86595.t1	AT1G12980	55.357	56	25	0	54	109	57	112	7.06e-12	63.9
MS.gene86595.t1	AT2G40340	51.786	56	27	0	54	109	72	127	7.29e-12	63.9
MS.gene86595.t1	AT2G40340	51.786	56	27	0	54	109	79	134	7.62e-12	63.9
MS.gene86595.t1	AT5G47220	52.632	57	26	1	54	109	117	173	1.70e-11	62.0
MS.gene86595.t1	AT5G13910	44.595	74	37	1	54	127	20	89	1.79e-11	61.6
MS.gene86595.t1	AT5G18560	45.070	71	38	1	39	109	41	110	2.31e-11	62.4
MS.gene86595.t1	AT5G25390	51.786	56	24	1	54	109	7	59	2.71e-11	60.8
MS.gene86595.t1	AT1G28160	52.542	59	28	0	54	112	39	97	2.78e-11	61.6
MS.gene86595.t1	AT1G77640	46.667	90	42	2	54	137	43	132	4.25e-11	60.8
MS.gene86595.t1	AT5G67000	44.286	70	36	1	39	108	109	175	4.71e-11	60.1

Find 56 sgRNAs with CRISPR-Local

Find 63 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGACATGTCAACTCCGAATT+TGG	0.204088	6.1:+51105474	MS.gene86595:CDS
TTCCTCCCTGCTCGCTTCTT+TGG	0.225255	6.1:-51105520	None:intergenic
GGAAGAGAAACTTAGATAAA+TGG	0.269349	6.1:+51105584	MS.gene86595:CDS
GCCAGAGTTGTGGAGGAATA+TGG	0.338237	6.1:+51105936	MS.gene86595:CDS
AGAAGATGCTGTTGAGGAAA+TGG	0.382238	6.1:-51105446	None:intergenic
GAAGAGAAACTTAGATAAAT+GGG	0.414389	6.1:+51105585	MS.gene86595:CDS
ATCTTGGAGGTTGCTGGAAT+AGG	0.418159	6.1:-51105760	None:intergenic
TGGCTGCAACATCGTGAGCT+CGG	0.427202	6.1:-51105681	None:intergenic
AAACATATTCAACTCCTTTG+TGG	0.437441	6.1:-51105881	None:intergenic
TGAGGAAATGGATTGTGAAT+TGG	0.438162	6.1:-51105434	None:intergenic
ATGTCTCCTACACATAGCTT+TGG	0.440249	6.1:+51105964	MS.gene86595:CDS
GGCTGCAACATCGTGAGCTC+GGG	0.441379	6.1:-51105680	None:intergenic
TTAGTCATTAAAGTCTTGTC+TGG	0.447019	6.1:-51105829	None:intergenic
GCTAATCGTACCTCCAAATT+CGG	0.451077	6.1:-51105487	None:intergenic
GTGAGCTCGGGCTGCCATCT+CGG	0.455278	6.1:-51105668	None:intergenic
CAAATCCTAGTCTTCGTGTT+GGG	0.456107	6.1:-51105625	None:intergenic
TGTTGCAGCCATGGCATTGA+GGG	0.456149	6.1:+51105693	MS.gene86595:CDS
TGTCTCCTACACATAGCTTT+GGG	0.457669	6.1:+51105965	MS.gene86595:CDS
AGCTCACGATGTTGCAGCCA+TGG	0.468549	6.1:+51105684	MS.gene86595:CDS
CCAACACGAAGACTAGGATT+TGG	0.470711	6.1:+51105626	MS.gene86595:CDS
CGGGCTGCCATCTCGGCGGT+TGG	0.487435	6.1:-51105661	None:intergenic
ACTCGCCACCCGGTGTATAG+AGG	0.498536	6.1:+51105556	MS.gene86595:CDS
AGTAATCCAAAGAAGCGAGC+AGG	0.504680	6.1:+51105514	MS.gene86595:CDS
GCCATATTCCTCCACAACTC+TGG	0.506491	6.1:-51105937	None:intergenic
AAGATGATGAGGTATCACTA+TGG	0.509514	6.1:+51106028	MS.gene86595:CDS
ATGTTGCAGCCATGGCATTG+AGG	0.532194	6.1:+51105692	MS.gene86595:CDS
CAAGATAAAAGATATTCAAA+AGG	0.534968	6.1:+51105777	MS.gene86595:CDS
TAAATGGGTGTGTGAAATGA+GGG	0.541686	6.1:+51105600	MS.gene86595:CDS
GAATTTGGAGGTACGATTAG+CGG	0.551670	6.1:+51105489	MS.gene86595:CDS
GGGAGCCCAACACGAAGACT+AGG	0.562532	6.1:+51105620	MS.gene86595:CDS
ACGAAGACTAGGATTTGGCT+AGG	0.572328	6.1:+51105631	MS.gene86595:CDS
GTAGCGGCCCCTCAATGCCA+TGG	0.573319	6.1:-51105701	None:intergenic
TTCCTCACACCTCTATACAC+CGG	0.578151	6.1:-51105565	None:intergenic
CCAAATCCTAGTCTTCGTGT+TGG	0.579118	6.1:-51105626	None:intergenic
GTAATCCAAAGAAGCGAGCA+GGG	0.580411	6.1:+51105515	MS.gene86595:CDS
TCCTCACACCTCTATACACC+GGG	0.580421	6.1:-51105564	None:intergenic
AGCAGGGAGGAAGATATTCA+AGG	0.582130	6.1:+51105531	MS.gene86595:CDS
ATAAATGGGTGTGTGAAATG+AGG	0.586819	6.1:+51105599	MS.gene86595:CDS
CATGTCAACTCCGAATTTGG+AGG	0.602972	6.1:+51105477	MS.gene86595:CDS
ATTCAAGGAAACTCGCCACC+CGG	0.604485	6.1:+51105546	MS.gene86595:CDS
TCATACCCAAAGCTATGTGT+AGG	0.605774	6.1:-51105970	None:intergenic
TGGAGGTTGCTGGAATAGGA+AGG	0.610301	6.1:-51105756	None:intergenic
GTTGCAGCCATGGCATTGAG+GGG	0.611621	6.1:+51105694	MS.gene86595:CDS
TGTTGAATATGCCAGAGTTG+TGG	0.615027	6.1:+51105926	MS.gene86595:CDS
ACAAGACTTTCAAGATGATG+AGG	0.645752	6.1:+51106017	MS.gene86595:CDS
TGTAGCTGTTGTCGCCACAA+AGG	0.648906	6.1:+51105867	MS.gene86595:CDS
CGAAGACTAGGATTTGGCTA+GGG	0.652853	6.1:+51105632	MS.gene86595:CDS
GTACGAAGAAGATGCTGTTG+AGG	0.656629	6.1:-51105452	None:intergenic
AATGACTAACGATATTGACA+CGG	0.658662	6.1:+51105843	MS.gene86595:CDS
CGAGTCTGCAAAATTGACAC+AGG	0.659220	6.1:-51105725	None:intergenic
CAAAATTGACACAGGCGTAG+CGG	0.661280	6.1:-51105717	None:intergenic
AGCTCGGGCTGCCATCTCGG+CGG	0.662264	6.1:-51105665	None:intergenic
TGAATATGCCAGAGTTGTGG+AGG	0.686416	6.1:+51105929	MS.gene86595:CDS
ACCCGGTGTATAGAGGTGTG+AGG	0.705873	6.1:+51105563	MS.gene86595:CDS
TCACACCTCTATACACCGGG+TGG	0.726886	6.1:-51105561	None:intergenic
ATCCAAAGAAGCGAGCAGGG+AGG	0.749882	6.1:+51105518	MS.gene86595:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CAAGATAAAAGATATTCAAA+AGG	+	chr6.1:51105777-51105796	MS.gene86595:CDS	20.0%
!!!	CTTTTGAATATCTTTTATCT+TGG	-	chr6.1:51105779-51105798	None:intergenic	20.0%
!	GAAGAGAAACTTAGATAAAT+GGG	+	chr6.1:51105585-51105604	MS.gene86595:CDS	25.0%
!!	TTGAATATCTTTTATCTTGG+AGG	-	chr6.1:51105776-51105795	None:intergenic	25.0%
	AAACATATTCAACTCCTTTG+TGG	-	chr6.1:51105884-51105903	None:intergenic	30.0%
	AATGACTAACGATATTGACA+CGG	+	chr6.1:51105843-51105862	MS.gene86595:CDS	30.0%
	GGAAGAGAAACTTAGATAAA+TGG	+	chr6.1:51105584-51105603	MS.gene86595:CDS	30.0%
!	TTAGTCATTAAAGTCTTGTC+TGG	-	chr6.1:51105832-51105851	None:intergenic	30.0%
	ACAAGACTTTCAAGATGATG+AGG	+	chr6.1:51106017-51106036	MS.gene86595:CDS	35.0%
	ATAAATGGGTGTGTGAAATG+AGG	+	chr6.1:51105599-51105618	MS.gene86595:CDS	35.0%
	TAAATGGGTGTGTGAAATGA+GGG	+	chr6.1:51105600-51105619	MS.gene86595:CDS	35.0%
!	AAGATGATGAGGTATCACTA+TGG	+	chr6.1:51106028-51106047	MS.gene86595:CDS	35.0%
!	GGAGTTGAATATGTTTTGTG+TGG	+	chr6.1:51105888-51105907	MS.gene86595:CDS	35.0%
!!	TGAGGAAATGGATTGTGAAT+TGG	-	chr6.1:51105437-51105456	None:intergenic	35.0%
	AGAAGATGCTGTTGAGGAAA+TGG	-	chr6.1:51105449-51105468	None:intergenic	40.0%
	ATGTCTCCTACACATAGCTT+TGG	+	chr6.1:51105964-51105983	MS.gene86595:CDS	40.0%
	GCTAATCGTACCTCCAAATT+CGG	-	chr6.1:51105490-51105509	None:intergenic	40.0%
	TCATACCCAAAGCTATGTGT+AGG	-	chr6.1:51105973-51105992	None:intergenic	40.0%
	TGTCTCCTACACATAGCTTT+GGG	+	chr6.1:51105965-51105984	MS.gene86595:CDS	40.0%
	TGTTGAATATGCCAGAGTTG+TGG	+	chr6.1:51105926-51105945	MS.gene86595:CDS	40.0%
!	CAAATCCTAGTCTTCGTGTT+GGG	-	chr6.1:51105628-51105647	None:intergenic	40.0%
!	CTGTGTCAATTTTGCAGACT+CGG	+	chr6.1:51105726-51105745	MS.gene86595:CDS	40.0%
!	GAATTTGGAGGTACGATTAG+CGG	+	chr6.1:51105489-51105508	MS.gene86595:CDS	40.0%
!	TCTTTTATCTTGGAGGTTGC+TGG	-	chr6.1:51105769-51105788	None:intergenic	40.0%
	ACGAAGACTAGGATTTGGCT+AGG	+	chr6.1:51105631-51105650	MS.gene86595:CDS	45.0%
	AGCAGGGAGGAAGATATTCA+AGG	+	chr6.1:51105531-51105550	MS.gene86595:CDS	45.0%
	AGTAATCCAAAGAAGCGAGC+AGG	+	chr6.1:51105514-51105533	MS.gene86595:CDS	45.0%
	ATCTTGGAGGTTGCTGGAAT+AGG	-	chr6.1:51105763-51105782	None:intergenic	45.0%
	CAAAATTGACACAGGCGTAG+CGG	-	chr6.1:51105720-51105739	None:intergenic	45.0%
	CATGTCAACTCCGAATTTGG+AGG	+	chr6.1:51105477-51105496	MS.gene86595:CDS	45.0%
	CCAACACGAAGACTAGGATT+TGG	+	chr6.1:51105626-51105645	MS.gene86595:CDS	45.0%
	CGAAGACTAGGATTTGGCTA+GGG	+	chr6.1:51105632-51105651	MS.gene86595:CDS	45.0%
	CGACATGTCAACTCCGAATT+TGG	+	chr6.1:51105474-51105493	MS.gene86595:CDS	45.0%
	CGAGTCTGCAAAATTGACAC+AGG	-	chr6.1:51105728-51105747	None:intergenic	45.0%
	GTAATCCAAAGAAGCGAGCA+GGG	+	chr6.1:51105515-51105534	MS.gene86595:CDS	45.0%
	GTACGAAGAAGATGCTGTTG+AGG	-	chr6.1:51105455-51105474	None:intergenic	45.0%
	TGAATATGCCAGAGTTGTGG+AGG	+	chr6.1:51105929-51105948	MS.gene86595:CDS	45.0%
	TTCCTCACACCTCTATACAC+CGG	-	chr6.1:51105568-51105587	None:intergenic	45.0%
!	CCAAATCCTAGTCTTCGTGT+TGG	-	chr6.1:51105629-51105648	None:intergenic	45.0%
!!!	TCAATTTTGCAGACTCGGTG+TGG	+	chr6.1:51105731-51105750	MS.gene86595:CDS	45.0%
	ATGTTGCAGCCATGGCATTG+AGG	+	chr6.1:51105692-51105711	MS.gene86595:CDS	50.0%
	ATTCAAGGAAACTCGCCACC+CGG	+	chr6.1:51105546-51105565	MS.gene86595:CDS	50.0%
	GCCAGAGTTGTGGAGGAATA+TGG	+	chr6.1:51105936-51105955	MS.gene86595:CDS	50.0%
	GCCATATTCCTCCACAACTC+TGG	-	chr6.1:51105940-51105959	None:intergenic	50.0%
	TCCTCACACCTCTATACACC+GGG	-	chr6.1:51105567-51105586	None:intergenic	50.0%
	TGGAGGTTGCTGGAATAGGA+AGG	-	chr6.1:51105759-51105778	None:intergenic	50.0%
	TGTAGCTGTTGTCGCCACAA+AGG	+	chr6.1:51105867-51105886	MS.gene86595:CDS	50.0%
!	TGTTGCAGCCATGGCATTGA+GGG	+	chr6.1:51105693-51105712	MS.gene86595:CDS	50.0%
	AGCTCACGATGTTGCAGCCA+TGG	+	chr6.1:51105684-51105703	MS.gene86595:CDS	55.0%
	ATCCAAAGAAGCGAGCAGGG+AGG	+	chr6.1:51105518-51105537	MS.gene86595:CDS	55.0%
	TCACACCTCTATACACCGGG+TGG	-	chr6.1:51105564-51105583	None:intergenic	55.0%
	TGGCTGCAACATCGTGAGCT+CGG	-	chr6.1:51105684-51105703	None:intergenic	55.0%
	TTCCTCCCTGCTCGCTTCTT+TGG	-	chr6.1:51105523-51105542	None:intergenic	55.0%
!	ACCCGGTGTATAGAGGTGTG+AGG	+	chr6.1:51105563-51105582	MS.gene86595:CDS	55.0%
!	GACTTTTCCAACCGCCGAGA+TGG	+	chr6.1:51105654-51105673	MS.gene86595:CDS	55.0%
!	GTTGCAGCCATGGCATTGAG+GGG	+	chr6.1:51105694-51105713	MS.gene86595:CDS	55.0%
	ACTCGCCACCCGGTGTATAG+AGG	+	chr6.1:51105556-51105575	MS.gene86595:CDS	60.0%
	GGCTGCAACATCGTGAGCTC+GGG	-	chr6.1:51105683-51105702	None:intergenic	60.0%
	GGGAGCCCAACACGAAGACT+AGG	+	chr6.1:51105620-51105639	MS.gene86595:CDS	60.0%
	GTAGCGGCCCCTCAATGCCA+TGG	-	chr6.1:51105704-51105723	None:intergenic	65.0%
	GTGAGCTCGGGCTGCCATCT+CGG	-	chr6.1:51105671-51105690	None:intergenic	65.0%
	AGCTCGGGCTGCCATCTCGG+CGG	-	chr6.1:51105668-51105687	None:intergenic	70.0%
	CGGGCTGCCATCTCGGCGGT+TGG	-	chr6.1:51105664-51105683	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.1	gene	51105412	51106059	51105412	ID=MS.gene86595
chr6.1	mRNA	51105412	51106059	51105412	ID=MS.gene86595.t1;Parent=MS.gene86595
chr6.1	exon	51105412	51106059	51105412	ID=MS.gene86595.t1.exon1;Parent=MS.gene86595.t1
chr6.1	CDS	51105412	51106059	51105412	ID=cds.MS.gene86595.t1;Parent=MS.gene86595.t1

Gene Sequence

>MS.gene86595

ATGTTGACTACTAACAACTCTTCCAATTCACAATCCATTTCCTCAACAGCATCTTCTTCGTACGACATGTCAACTCCGAATTTGGAGGTACGATTAGCGGCTAGTAATCCAAAGAAGCGAGCAGGGAGGAAGATATTCAAGGAAACTCGCCACCCGGTGTATAGAGGTGTGAGGAAGAGAAACTTAGATAAATGGGTGTGTGAAATGAGGGAGCCCAACACGAAGACTAGGATTTGGCTAGGGACTTTTCCAACCGCCGAGATGGCAGCCCGAGCTCACGATGTTGCAGCCATGGCATTGAGGGGCCGCTACGCCTGTGTCAATTTTGCAGACTCGGTGTGGCGCCTTCCTATTCCAGCAACCTCCAAGATAAAAGATATTCAAAAGGCTGCTGCTGAAGCTGCAGAAGCTTTTAGACCAGACAAGACTTTAATGACTAACGATATTGACACGGTTGTAGCTGTTGTCGCCACAAAGGAGTTGAATATGTTTTGTGTGGAAGTCGAAGATGACGTGTTGAATATGCCAGAGTTGTGGAGGAATATGGCACTAATGTCTCCTACACATAGCTTTGGGTATGATGATCAGTATGAAGATATTCATGTACAAGACTTTCAAGATGATGAGGTATCACTATGGAACTTCTAA

Protein sequence

>MS.gene86595.t1

MLTTNNSSNSQSISSTASSSYDMSTPNLEVRLAASNPKKRAGRKIFKETRHPVYRGVRKRNLDKWVCEMREPNTKTRIWLGTFPTAEMAARAHDVAAMALRGRYACVNFADSVWRLPIPATSKIKDIQKAAAEAAEAFRPDKTLMTNDIDTVVAVVATKELNMFCVEVEDDVLNMPELWRNMALMSPTHSFGYDDQYEDIHVQDFQDDEVSLWNF