AlfalfaGEDB | MS.gene30845

M. sativa cultivar XinJiangDaYe / MS.gene30845

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00847.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene30845.t1	AGR40689.1	86.9	199	25	1	1	199	1	198	3.30E-84	321.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene30845.t1	Q9M0L0	54.4	195	76	4	11	199	29	216	1.5e-45	184.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene30845.t1	S5LSR1	86.9	199	25	1	1	199	1	198	2.4e-84	321.2

TFs/TRs:

Gene ID	Type	Classification
MS.gene30845.t1	TF	AP2/ERF-ERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene053330	MS.gene30845	0.817103	3.92E-52	-1.69E-46
MS.gene056305	MS.gene30845	0.81685	4.47E-52	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene30845	MS.gene43297	PPI
MS.gene79326	MS.gene30845	PPI
MS.gene79327	MS.gene30845	PPI
MS.gene86618	MS.gene30845	PPI
MS.gene006341	MS.gene30845	PPI
MS.gene30845	MS.gene86601	PPI
MS.gene30845	MS.gene86591	PPI
MS.gene41386	MS.gene30845	PPI
MS.gene86611	MS.gene30845	PPI
MS.gene34447	MS.gene30845	PPI
MS.gene30845	MS.gene30853	PPI
MS.gene86597	MS.gene30845	PPI
MS.gene30845	MS.gene86596	PPI
MS.gene86594	MS.gene30845	PPI
MS.gene30845	MS.gene30844	PPI
MS.gene30845	MS.gene79314	PPI
MS.gene30845	MS.gene41386	PPI
MS.gene30845	MS.gene79320	PPI
MS.gene43298	MS.gene30845	PPI
MS.gene30845	MS.gene79316	PPI
MS.gene30845	MS.gene79328	PPI
MS.gene30841	MS.gene30845	PPI
MS.gene38658	MS.gene30845	PPI
MS.gene30845	MS.gene79318	PPI
MS.gene30845	MS.gene79321	PPI
MS.gene86610	MS.gene30845	PPI
MS.gene86613	MS.gene30845	PPI
MS.gene30845	MS.gene49040	PPI
MS.gene30845	MS.gene86612	PPI
MS.gene30845	MS.gene49253	PPI
MS.gene79330	MS.gene30845	PPI
MS.gene62760	MS.gene30845	PPI
MS.gene86588	MS.gene30845	PPI
MS.gene30851	MS.gene30845	PPI
MS.gene49255	MS.gene30845	PPI
MS.gene30848	MS.gene30845	PPI
MS.gene30845	MS.gene86595	PPI
MS.gene30845	MS.gene79310	PPI
MS.gene86608	MS.gene30845	PPI
MS.gene86615	MS.gene30845	PPI
MS.gene30845	MS.gene62759	PPI
MS.gene30845	MS.gene79307	PPI
MS.gene62758	MS.gene30845	PPI
MS.gene30845	MS.gene49251	PPI
MS.gene30845	MS.gene86607	PPI
MS.gene30842	MS.gene30845	PPI
MS.gene79315	MS.gene30845	PPI
MS.gene49250	MS.gene30845	PPI
MS.gene49249	MS.gene30845	PPI
MS.gene86599	MS.gene30845	PPI
MS.gene30845	MS.gene49252	PPI
MS.gene30845	MS.gene30840	PPI
MS.gene30852	MS.gene30845	PPI
MS.gene79322	MS.gene30845	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene30845.t1	MTR_6g465530	90.452	199	18	1	1	199	1	198	2.62e-117	331
MS.gene30845.t1	MTR_6g465510	87.981	208	16	1	1	199	1	208	8.93e-114	323
MS.gene30845.t1	MTR_6g465420	76.562	192	39	2	3	193	24	210	1.77e-105	304
MS.gene30845.t1	MTR_6g465460	78.307	189	32	3	7	193	28	209	1.38e-103	299
MS.gene30845.t1	MTR_6g465450	78.866	194	34	2	2	193	23	211	9.87e-103	296
MS.gene30845.t1	MTR_6g465430	76.166	193	38	3	3	193	24	210	1.21e-97	283
MS.gene30845.t1	MTR_6g466000	70.792	202	47	3	6	199	30	227	3.40e-96	279
MS.gene30845.t1	MTR_6g465690	75.401	187	39	2	5	190	35	215	1.33e-94	276
MS.gene30845.t1	MTR_6g466130	71.357	199	52	2	1	199	35	228	1.04e-90	265
MS.gene30845.t1	MTR_6g465850	52.653	245	66	3	5	199	35	279	6.24e-73	222
MS.gene30845.t1	MTR_1g101600	59.500	200	66	4	4	199	12	200	2.88e-68	207
MS.gene30845.t1	MTR_6g465990	59.901	202	49	4	6	199	16	193	4.15e-68	206
MS.gene30845.t1	MTR_6g466020	57.979	188	51	3	10	196	20	180	1.38e-61	189
MS.gene30845.t1	MTR_5g010930	46.411	209	81	5	11	199	27	224	1.13e-53	171
MS.gene30845.t1	MTR_5g010940	46.635	208	94	5	4	199	25	227	1.65e-50	163
MS.gene30845.t1	MTR_5g010910	47.959	196	85	5	16	199	32	222	2.02e-49	160
MS.gene30845.t1	MTR_4g102660	50.952	210	85	8	3	199	14	218	1.09e-48	158
MS.gene30845.t1	MTR_3g110205	56.842	95	41	0	28	122	38	132	2.77e-32	115
MS.gene30845.t1	MTR_8g006410	41.040	173	84	2	28	197	47	204	3.14e-32	115
MS.gene30845.t1	MTR_7g117690	60.227	88	35	0	20	107	15	102	1.52e-31	112
MS.gene30845.t1	MTR_7g046260	61.728	81	31	0	27	107	55	135	1.16e-30	112
MS.gene30845.t1	MTR_2g085015	42.073	164	78	5	27	173	41	204	2.19e-30	111
MS.gene30845.t1	MTR_5g012910	60.759	79	31	0	29	107	24	102	1.30e-29	108
MS.gene30845.t1	MTR_2g101340	50.407	123	55	2	13	129	15	137	1.09e-28	106
MS.gene30845.t1	MTR_8g027465	55.319	94	39	1	17	107	23	116	1.22e-28	105
MS.gene30845.t1	MTR_8g013860	60.759	79	31	0	29	107	43	121	1.54e-28	106
MS.gene30845.t1	MTR_8g102800	53.535	99	46	0	23	121	27	125	1.29e-27	104
MS.gene30845.t1	MTR_6g088405	58.974	78	32	0	30	107	41	118	4.14e-27	102
MS.gene30845.t1	MTR_4g100650	58.974	78	32	0	30	107	71	148	1.16e-25	100
MS.gene30845.t1	MTR_4g102670	55.696	79	34	1	29	107	11	88	1.58e-25	97.4
MS.gene30845.t1	MTR_6g088425	58.140	86	36	0	29	114	45	130	1.18e-22	91.7
MS.gene30845.t1	MTR_4g035430	51.807	83	40	0	32	114	31	113	1.21e-22	91.3
MS.gene30845.t1	MTR_1g006660	55.435	92	37	1	20	107	30	121	3.63e-22	90.9
MS.gene30845.t1	MTR_5g008590	36.723	177	100	4	33	198	11	186	1.11e-20	85.5
MS.gene30845.t1	MTR_5g008550	43.564	101	55	1	33	131	21	121	3.34e-19	81.6
MS.gene30845.t1	MTR_1g101550	41.844	141	77	3	33	169	57	196	4.54e-17	76.6
MS.gene30845.t1	MTR_3g102100	39.344	122	66	4	18	137	31	146	6.25e-17	75.1
MS.gene30845.t1	MTR_2g435590	49.333	75	35	1	17	91	83	154	8.23e-17	76.6
MS.gene30845.t1	MTR_1g014780	55.000	60	27	0	32	91	37	96	1.14e-16	75.5
MS.gene30845.t1	MTR_5g008470	42.857	84	48	0	35	118	77	160	1.41e-16	74.3
MS.gene30845.t1	MTR_8g090350	43.011	93	48	2	17	104	95	187	1.51e-16	76.3
MS.gene30845.t1	MTR_1g060910	35.260	173	71	7	17	173	3	150	1.52e-16	73.9
MS.gene30845.t1	MTR_5g083340	58.621	58	24	0	33	90	85	142	2.48e-16	76.6
MS.gene30845.t1	MTR_3g105510	43.529	85	48	0	33	117	37	121	4.00e-16	74.3
MS.gene30845.t1	MTR_1g014820	41.304	92	50	1	32	119	26	117	5.91e-16	74.3
MS.gene30845.t1	MTR_1g019110	36.364	99	60	1	33	131	44	139	6.09e-16	72.8
MS.gene30845.t1	MTR_2g043030	30.526	190	105	6	32	199	18	202	1.06e-15	72.4
MS.gene30845.t1	MTR_8g092460	56.667	60	26	0	33	92	145	204	1.12e-15	73.9
MS.gene30845.t1	MTR_2g043050	44.706	85	47	0	32	116	18	102	1.14e-15	72.8
MS.gene30845.t1	MTR_7g021010	51.471	68	32	1	26	92	4	71	1.33e-15	70.9
MS.gene30845.t1	MTR_2g105380	48.529	68	35	0	21	88	105	172	1.36e-15	74.3
MS.gene30845.t1	MTR_7g020980	50.000	64	32	0	29	92	47	110	1.90e-15	71.2
MS.gene30845.t1	MTR_1g087920	43.478	92	50	1	11	100	53	144	1.94e-15	73.2
MS.gene30845.t1	MTR_1g014860	50.000	64	32	0	28	91	17	80	2.42e-15	72.0
MS.gene30845.t1	MTR_3g074130	55.932	59	26	0	32	90	149	207	2.53e-15	73.2
MS.gene30845.t1	MTR_1g090170	52.381	63	30	0	28	90	147	209	3.23e-15	72.8
MS.gene30845.t1	MTR_5g062700	55.932	59	26	0	32	90	172	230	3.27e-15	73.2
MS.gene30845.t1	MTR_7g021010	40.964	83	49	0	29	111	47	129	3.63e-15	70.5
MS.gene30845.t1	MTR_1g090170	52.381	63	30	0	28	90	234	296	5.22e-15	72.8
MS.gene30845.t1	MTR_5g083330	49.315	73	37	0	18	90	20	92	5.42e-15	72.0
MS.gene30845.t1	MTR_2g090235	55.932	59	26	0	32	90	217	275	7.86e-15	72.4
MS.gene30845.t1	MTR_3g053690	56.250	64	25	1	25	88	22	82	8.45e-15	70.5
MS.gene30845.t1	MTR_1g014800	51.667	60	29	0	32	91	30	89	9.38e-15	70.1
MS.gene30845.t1	MTR_4g086220	57.143	56	24	0	33	88	96	151	9.42e-15	70.5
MS.gene30845.t1	MTR_3g105480	43.373	83	47	0	35	117	33	115	9.96e-15	70.5
MS.gene30845.t1	MTR_5g016750	55.357	56	25	0	33	88	25	80	1.03e-14	69.3
MS.gene30845.t1	MTR_2g078680	57.143	56	24	0	33	88	31	86	1.50e-14	69.3
MS.gene30845.t1	MTR_2g089170	57.143	56	24	0	33	88	65	120	1.99e-14	68.9
MS.gene30845.t1	MTR_1g028560	54.386	57	26	0	33	89	115	171	2.04e-14	70.9
MS.gene30845.t1	MTR_5g082950	58.929	56	23	0	33	88	66	121	2.38e-14	70.5
MS.gene30845.t1	MTR_4g086190	55.357	56	25	0	33	88	96	151	3.50e-14	68.9
MS.gene30845.t1	MTR_4g086160	55.357	56	25	0	33	88	96	151	3.65e-14	68.9
MS.gene30845.t1	MTR_7g028925	53.333	60	25	1	32	91	28	84	3.83e-14	65.5
MS.gene30845.t1	MTR_4g086165	55.357	56	25	0	33	88	82	137	4.25e-14	68.2
MS.gene30845.t1	MTR_8g022820	48.485	66	34	0	23	88	114	179	4.49e-14	70.1
MS.gene30845.t1	MTR_8g022820	48.485	66	34	0	23	88	114	179	4.49e-14	70.1
MS.gene30845.t1	MTR_8g022820	48.485	66	34	0	23	88	113	178	4.52e-14	70.1
MS.gene30845.t1	MTR_1g074310	51.613	62	29	1	33	93	21	82	5.17e-14	66.6
MS.gene30845.t1	MTR_4g114570	47.887	71	30	1	33	103	7	70	7.61e-14	67.8
MS.gene30845.t1	MTR_2g015050	49.275	69	34	1	21	88	122	190	7.72e-14	68.6
MS.gene30845.t1	MTR_0939s0010	55.357	56	25	0	33	88	65	120	7.75e-14	67.4
MS.gene30845.t1	MTR_4g078710	34.951	103	61	1	33	135	28	124	7.83e-14	67.8
MS.gene30845.t1	MTR_7g092190	57.143	56	24	0	33	88	30	85	1.15e-13	68.2
MS.gene30845.t1	MTR_5g009620	41.304	92	48	1	3	88	76	167	1.46e-13	68.2
MS.gene30845.t1	MTR_2g438180	53.226	62	28	1	33	93	14	75	1.88e-13	64.7
MS.gene30845.t1	MTR_2g014340	53.571	56	26	0	33	88	19	74	3.28e-13	65.9
MS.gene30845.t1	MTR_3g106290	57.143	56	24	0	33	88	8	63	4.49e-13	65.1
MS.gene30845.t1	MTR_3g072610	48.315	89	42	2	33	117	25	113	5.19e-13	65.5
MS.gene30845.t1	MTR_4g010640	53.571	56	26	0	33	88	7	62	5.21e-13	65.5
MS.gene30845.t1	MTR_1g048610	52.632	57	26	1	33	88	89	145	7.40e-13	65.5
MS.gene30845.t1	MTR_2g103700	50.000	60	30	0	33	92	7	66	8.28e-13	64.3
MS.gene30845.t1	MTR_4g008860	57.143	56	24	0	33	88	8	63	1.00e-12	64.3
MS.gene30845.t1	MTR_2g014300	55.357	56	25	0	33	88	15	70	1.07e-12	63.9
MS.gene30845.t1	MTR_1g070070	52.632	57	26	1	33	88	21	77	1.18e-12	63.2
MS.gene30845.t1	MTR_2g043040	40.000	85	51	0	32	116	18	102	1.45e-12	64.3
MS.gene30845.t1	MTR_2g016730	40.659	91	48	2	22	111	11	96	1.59e-12	65.5
MS.gene30845.t1	MTR_1g074230	54.386	57	25	1	33	88	19	75	1.60e-12	62.4
MS.gene30845.t1	MTR_4g054740	40.698	86	45	2	8	92	77	157	2.10e-12	64.3
MS.gene30845.t1	MTR_4g100420	54.386	57	25	1	33	88	157	213	2.27e-12	64.7
MS.gene30845.t1	MTR_2g043020	28.571	189	111	5	32	199	18	203	2.34e-12	63.5
MS.gene30845.t1	MTR_3g090760	30.667	150	92	2	17	156	89	236	2.37e-12	65.1
MS.gene30845.t1	MTR_1g074250	50.820	61	28	1	30	88	16	76	3.07e-12	61.6
MS.gene30845.t1	MTR_4g054360	42.683	82	41	2	12	92	108	184	5.21e-12	63.5
MS.gene30845.t1	MTR_4g100450	45.946	74	39	1	16	88	137	210	5.58e-12	63.5
MS.gene30845.t1	MTR_5g085100	44.186	86	38	2	13	98	29	104	8.21e-12	63.2
MS.gene30845.t1	MTR_5g085070	47.945	73	28	2	26	98	47	109	1.26e-11	62.4
MS.gene30845.t1	MTR_4g088005	44.928	69	37	1	21	88	45	113	1.51e-11	59.7
MS.gene30845.t1	MTR_5g008540	44.262	61	34	0	35	95	26	86	2.03e-11	58.5
MS.gene30845.t1	MTR_8g069360	50.000	56	28	0	33	88	44	99	2.25e-11	62.4
MS.gene30845.t1	MTR_1g090290	48.387	62	29	2	28	88	110	169	2.26e-11	60.8
MS.gene30845.t1	MTR_4g111915	44.068	59	33	0	33	91	53	111	3.27e-11	58.9
MS.gene30845.t1	MTR_5g075570	45.000	60	33	0	29	88	120	179	4.27e-11	60.8
MS.gene30845.t1	MTR_6g041970	38.372	86	40	1	33	118	18	90	4.42e-11	57.8
MS.gene30845.t1	MTR_4g054860	43.373	83	41	3	11	92	114	191	4.44e-11	60.8
MS.gene30845.t1	MTR_8g099215	44.444	81	36	2	17	88	82	162	7.63e-11	60.5
MS.gene30845.t1	MTR_6g029180	44.444	72	39	1	21	92	22	92	8.91e-11	60.1
MS.gene30845.t1	MTR_8g006840	49.123	57	28	1	33	88	125	181	9.69e-11	58.9
MS.gene30845.t1	MTR_4g112490	44.068	59	33	0	33	91	53	111	9.71e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene30845.t1	AT4G25470	55.051	198	72	5	10	199	28	216	5.38e-68	207
MS.gene30845.t1	AT4G25480	55.556	198	69	4	11	199	29	216	1.28e-62	193
MS.gene30845.t1	AT5G51990	51.759	199	80	4	10	199	31	222	6.06e-62	192
MS.gene30845.t1	AT4G25490	56.122	196	71	4	11	199	26	213	1.20e-60	188
MS.gene30845.t1	AT1G12610	47.573	206	97	3	5	199	2	207	9.20e-55	173
MS.gene30845.t1	AT1G63030	46.667	195	87	3	6	199	3	181	3.91e-54	171
MS.gene30845.t1	AT1G63030	46.667	195	87	3	6	199	3	181	3.91e-54	171
MS.gene30845.t1	AT5G25810	57.447	94	39	1	22	114	24	117	1.82e-32	116
MS.gene30845.t1	AT5G11590	42.647	136	78	0	29	164	47	182	8.87e-31	112
MS.gene30845.t1	AT2G44940	59.140	93	38	0	22	114	89	181	1.68e-30	113
MS.gene30845.t1	AT4G32800	50.467	107	47	1	20	120	6	112	3.98e-30	110
MS.gene30845.t1	AT2G35700	61.250	80	31	0	28	107	40	119	1.03e-29	108
MS.gene30845.t1	AT4G16750	48.182	110	52	1	3	107	5	114	9.65e-29	105
MS.gene30845.t1	AT1G01250	51.887	106	48	1	5	107	14	119	1.53e-28	105
MS.gene30845.t1	AT2G36450	38.043	184	106	5	21	199	3	183	4.72e-28	104
MS.gene30845.t1	AT3G16280	41.530	183	84	5	29	199	57	228	1.28e-27	104
MS.gene30845.t1	AT3G16280	41.530	183	84	5	29	199	75	246	1.45e-27	105
MS.gene30845.t1	AT5G52020	42.458	179	87	6	29	199	61	231	8.79e-26	99.8
MS.gene30845.t1	AT3G60490	56.098	82	35	1	27	107	64	145	3.18e-25	99.0
MS.gene30845.t1	AT2G25820	59.211	76	31	0	32	107	25	100	3.58e-25	98.2
MS.gene30845.t1	AT1G71450	45.283	106	58	0	32	137	23	128	6.27e-22	88.6
MS.gene30845.t1	AT1G33760	51.685	89	43	0	33	121	20	108	1.66e-19	82.0
MS.gene30845.t1	AT1G21910	47.312	93	42	1	33	118	50	142	4.07e-19	82.0
MS.gene30845.t1	AT2G47520	43.023	86	46	1	9	91	23	108	6.17e-19	80.5
MS.gene30845.t1	AT1G77200	55.844	77	34	0	31	107	41	117	1.33e-18	81.3
MS.gene30845.t1	AT1G12630	38.674	181	98	4	29	199	15	192	2.00e-18	79.7
MS.gene30845.t1	AT1G46768	57.143	63	26	1	28	90	27	88	6.95e-18	76.6
MS.gene30845.t1	AT1G46768	57.143	63	26	1	28	90	27	88	7.01e-18	77.0
MS.gene30845.t1	AT1G46768	57.143	63	26	1	28	90	27	88	7.01e-18	77.0
MS.gene30845.t1	AT4G13620	57.627	59	25	0	32	90	231	289	2.84e-17	79.3
MS.gene30845.t1	AT3G16770	52.778	72	30	1	19	90	69	136	5.43e-17	77.0
MS.gene30845.t1	AT4G06746	53.226	62	29	0	33	94	36	97	8.41e-17	74.3
MS.gene30845.t1	AT1G22190	52.055	73	33	1	18	90	70	140	9.51e-17	76.3
MS.gene30845.t1	AT2G22200	48.000	75	37	1	32	104	70	144	1.10e-16	76.3
MS.gene30845.t1	AT4G39780	55.738	61	27	0	28	88	88	148	1.21e-16	76.3
MS.gene30845.t1	AT1G74930	43.023	86	49	0	33	118	21	106	1.35e-16	74.7
MS.gene30845.t1	AT3G50260	38.739	111	56	3	26	136	14	112	1.46e-16	73.6
MS.gene30845.t1	AT5G21960	46.429	84	45	0	31	114	5	88	1.97e-16	74.7
MS.gene30845.t1	AT5G65130	50.649	77	36	1	18	92	94	170	2.37e-16	75.5
MS.gene30845.t1	AT5G65130	50.649	77	36	1	18	92	96	172	2.37e-16	75.5
MS.gene30845.t1	AT2G23340	38.462	104	59	1	33	136	28	126	3.08e-16	73.6
MS.gene30845.t1	AT3G11020	54.545	66	30	0	27	92	72	137	4.86e-16	75.5
MS.gene30845.t1	AT4G36900	55.000	60	27	0	29	88	26	85	5.89e-16	73.2
MS.gene30845.t1	AT2G33710	46.835	79	37	1	28	101	65	143	1.72e-15	72.4
MS.gene30845.t1	AT5G67190	55.357	56	25	0	33	88	21	76	1.97e-15	71.2
MS.gene30845.t1	AT2G33710	46.835	79	37	1	28	101	65	143	2.26e-15	72.0
MS.gene30845.t1	AT1G78080	55.932	59	26	0	32	90	151	209	2.43e-15	73.6
MS.gene30845.t1	AT1G19210	35.652	115	74	0	33	147	12	126	3.02e-15	70.9
MS.gene30845.t1	AT5G05410	55.932	59	26	0	33	91	79	137	7.32e-15	71.6
MS.gene30845.t1	AT5G05410	55.932	59	26	0	33	91	79	137	9.43e-15	71.6
MS.gene30845.t1	AT1G36060	57.895	57	24	0	32	88	142	198	9.71e-15	71.6
MS.gene30845.t1	AT4G28140	52.542	59	28	0	32	90	142	200	1.20e-14	71.2
MS.gene30845.t1	AT2G20880	56.140	57	25	0	32	88	186	242	1.51e-14	71.2
MS.gene30845.t1	AT3G15210	57.143	56	24	0	33	88	25	80	1.86e-14	69.7
MS.gene30845.t1	AT1G71520	33.333	141	72	5	27	161	8	132	2.34e-14	67.8
MS.gene30845.t1	AT5G13330	51.562	64	29	1	29	92	37	98	2.59e-14	68.9
MS.gene30845.t1	AT5G44210	55.357	56	25	0	33	88	33	88	4.29e-14	68.2
MS.gene30845.t1	AT3G57600	48.611	72	37	0	17	88	12	83	4.62e-14	69.3
MS.gene30845.t1	AT5G61890	51.562	64	29	1	29	92	88	149	4.90e-14	68.9
MS.gene30845.t1	AT5G61600	57.377	61	23	2	29	88	86	144	6.28e-14	68.6
MS.gene30845.t1	AT5G07580	46.835	79	39	2	27	104	106	182	7.69e-14	67.8
MS.gene30845.t1	AT1G22810	38.710	93	42	2	33	117	14	99	8.94e-14	66.2
MS.gene30845.t1	AT5G64750	39.130	92	50	2	43	134	195	280	9.29e-14	69.3
MS.gene30845.t1	AT1G75490	45.833	72	39	0	32	103	41	112	1.05e-13	67.4
MS.gene30845.t1	AT1G03800	48.529	68	32	1	21	88	44	108	1.08e-13	67.8
MS.gene30845.t1	AT5G51190	53.968	63	26	2	27	88	68	128	1.68e-13	67.0
MS.gene30845.t1	AT1G72360	42.105	76	44	0	13	88	54	129	1.73e-13	67.4
MS.gene30845.t1	AT1G72360	46.032	63	34	0	26	88	18	80	2.03e-13	66.6
MS.gene30845.t1	AT1G15360	55.357	56	25	0	33	88	7	62	2.09e-13	66.2
MS.gene30845.t1	AT1G15360	55.357	56	25	0	33	88	7	62	2.09e-13	66.2
MS.gene30845.t1	AT5G47230	50.000	72	35	1	18	88	141	212	2.09e-13	67.8
MS.gene30845.t1	AT5G43410	51.667	60	28	1	30	88	12	71	2.25e-13	64.7
MS.gene30845.t1	AT4G11140	51.786	56	27	0	33	88	87	142	3.17e-13	67.0
MS.gene30845.t1	AT1G43160	36.154	130	72	3	33	162	61	179	3.31e-13	65.5
MS.gene30845.t1	AT4G27950	52.632	57	27	0	33	89	118	174	3.32e-13	67.4
MS.gene30845.t1	AT1G72360	46.032	63	34	0	26	88	69	131	5.20e-13	66.2
MS.gene30845.t1	AT3G61630	44.304	79	38	1	33	111	105	177	6.99e-13	66.2
MS.gene30845.t1	AT3G23230	48.387	62	31	1	33	93	20	81	7.16e-13	63.5
MS.gene30845.t1	AT4G31060	40.244	82	45	1	11	88	1	82	7.45e-13	64.7
MS.gene30845.t1	AT5G25390	51.786	56	27	0	33	88	7	62	8.10e-13	64.7
MS.gene30845.t1	AT5G18450	45.000	80	40	1	9	88	14	89	1.21e-12	65.5
MS.gene30845.t1	AT3G20310	50.000	62	31	0	27	88	21	82	2.10e-12	64.3
MS.gene30845.t1	AT5G25190	55.357	56	25	0	33	88	8	63	3.40e-12	62.8
MS.gene30845.t1	AT1G28370	51.786	56	27	0	33	88	20	75	3.99e-12	62.0
MS.gene30845.t1	AT5G53290	50.877	57	28	0	33	89	125	181	4.05e-12	64.3
MS.gene30845.t1	AT1G28360	55.357	56	25	0	33	88	12	67	4.57e-12	62.4
MS.gene30845.t1	AT1G28370	51.786	56	27	0	33	88	58	113	6.27e-12	62.4
MS.gene30845.t1	AT4G23750	49.123	57	29	0	33	89	122	178	9.75e-12	63.2
MS.gene30845.t1	AT4G23750	49.123	57	29	0	33	89	122	178	9.75e-12	63.2
MS.gene30845.t1	AT2G40350	51.786	56	27	0	33	88	74	129	1.07e-11	60.8
MS.gene30845.t1	AT1G50640	53.571	56	26	0	33	88	28	83	1.13e-11	62.0
MS.gene30845.t1	AT4G17490	52.381	63	27	2	27	88	133	193	1.23e-11	62.4
MS.gene30845.t1	AT2G40340	50.000	56	28	0	33	88	14	69	1.35e-11	62.4
MS.gene30845.t1	AT2G40340	50.000	56	28	0	33	88	14	69	1.35e-11	62.4
MS.gene30845.t1	AT2G40340	50.000	56	28	0	33	88	14	69	1.35e-11	62.4
MS.gene30845.t1	AT2G40350	51.786	56	27	0	33	88	67	122	1.37e-11	60.5
MS.gene30845.t1	AT1G77640	44.444	90	44	1	33	116	43	132	1.67e-11	61.6
MS.gene30845.t1	AT5G47220	52.632	57	26	1	33	88	117	173	1.74e-11	61.6
MS.gene30845.t1	AT2G46310	48.214	56	29	0	33	88	99	154	2.32e-11	62.0
MS.gene30845.t1	AT2G40340	50.000	56	28	0	33	88	72	127	2.33e-11	62.0
MS.gene30845.t1	AT5G19790	50.000	58	29	0	33	90	22	79	2.55e-11	61.2
MS.gene30845.t1	AT2G40340	50.000	56	28	0	33	88	72	127	2.76e-11	62.0
MS.gene30845.t1	AT2G40340	50.000	56	28	0	33	88	79	134	3.05e-11	61.6
MS.gene30845.t1	AT5G61590	56.716	67	26	2	23	88	99	163	3.95e-11	60.1
MS.gene30845.t1	AT1G12890	42.308	78	42	1	11	88	2	76	4.58e-11	60.1

Find 62 sgRNAs with CRISPR-Local

Find 69 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGTTGCTTCAATGGCATTA+AGG	0.227810	6.2:-58914890	MS.gene30845:CDS
GGAAGAGGAACTTAGATAAA+TGG	0.259157	6.2:-58914998	MS.gene30845:CDS
CAAATCTTAGTCTTCTTGTT+TGG	0.292823	6.2:+58914957	None:intergenic
AGCAGGGAGGAAGAAGTTTA+AGG	0.309502	6.2:-58915051	MS.gene30845:CDS
GACTCGCCACCCGGTATATA+GGG	0.321867	6.2:-58915027	MS.gene30845:CDS
GCCAGAGTTGTGGAGGAATA+TGG	0.338237	6.2:-58914625	MS.gene30845:CDS
AGACTCGCCACCCGGTATAT+AGG	0.350439	6.2:-58915028	MS.gene30845:CDS
ATGTGCCCGGGCTGCCATCT+CGG	0.400727	6.2:+58914914	None:intergenic
GAAGAGGAACTTAGATAAAT+GGG	0.403807	6.2:-58914997	MS.gene30845:CDS
TTAAACTTCTTCCTCCCTGC+TGG	0.404819	6.2:+58915053	None:intergenic
TGTTGCTTCAATGGCATTAA+GGG	0.407611	6.2:-58914889	MS.gene30845:CDS
AACTGCCGAGATGGCAGCCC+GGG	0.407631	6.2:-58914919	MS.gene30845:CDS
GCCTCAGCGGTGGCAGGAAT+AGG	0.415517	6.2:+58914822	None:intergenic
CAAACAAGAAGACTAAGATT+TGG	0.423028	6.2:-58914956	MS.gene30845:CDS
CTGTCTCAACTTTGCAGACT+CGG	0.436160	6.2:-58914856	MS.gene30845:CDS
AATGTCCCCTACACATAGTA+TGG	0.442156	6.2:-58914598	MS.gene30845:CDS
GGCAGCTGCAGAAGCTGCCG+AGG	0.451466	6.2:-58914784	MS.gene30845:CDS
GGCACATGATGTTGCTTCAA+TGG	0.452514	6.2:-58914898	MS.gene30845:CDS
ATATGTTTACAAGTAACAAC+GGG	0.454775	6.2:-58915109	MS.gene30845:CDS
ATAAATGGGTTTGTGAAATG+AGG	0.462024	6.2:-58914983	MS.gene30845:CDS
TTCCTCACACCCCTATATAC+CGG	0.471420	6.2:+58915017	None:intergenic
CTAGTCATTAAAGTCTTGTC+TGG	0.471563	6.2:+58914753	None:intergenic
TGTTGAAGTCGAAGAAGAAG+AGG	0.476444	6.2:-58914661	MS.gene30845:CDS
CGGGCTGCCATCTCGGCAGT+TGG	0.488790	6.2:+58914921	None:intergenic
AGTACAAGACTTTCAATATG+AGG	0.490333	6.2:-58914553	MS.gene30845:CDS
CATGCTCCATACTATGTGTA+GGG	0.491173	6.2:+58914592	None:intergenic
TTGAAGCAACATCATGTGCC+CGG	0.494126	6.2:+58914901	None:intergenic
CTGAGGCAAAAGACATTCAA+AGG	0.499259	6.2:-58914806	MS.gene30845:CDS
TATATAGGGGTGTGAGGAAG+AGG	0.500596	6.2:-58915013	MS.gene30845:CDS
TAAATGGGTTTGTGAAATGA+GGG	0.505569	6.2:-58914982	MS.gene30845:CDS
GCCATATTCCTCCACAACTC+TGG	0.506491	6.2:+58914624	None:intergenic
AATATGAGGAGGTATCACTA+TGG	0.509514	6.2:-58914539	MS.gene30845:CDS
CAACTGCCGAGATGGCAGCC+CGG	0.522483	6.2:-58914920	MS.gene30845:CDS
TCATGCTCCATACTATGTGT+AGG	0.541468	6.2:+58914591	None:intergenic
GTTTAAGGAGACTCGCCACC+CGG	0.558195	6.2:-58915036	MS.gene30845:CDS
CGAGTCTGCAAAGTTGAGAC+AGG	0.558907	6.2:+58914857	None:intergenic
TTACAAGTAACAACGGGGAG+GGG	0.563550	6.2:-58915103	MS.gene30845:CDS
TGAGGCAAAAGACATTCAAA+GGG	0.575611	6.2:-58914805	MS.gene30845:CDS
TGAAGCAACATCATGTGCCC+GGG	0.576327	6.2:+58914902	None:intergenic
AAGAAGACTAAGATTTGGCT+AGG	0.578791	6.2:-58914951	MS.gene30845:CDS
TCCTATTCCTGCCACCGCTG+AGG	0.581983	6.2:-58914823	MS.gene30845:CDS
CTTGTCTGGTCTGAAAGCCT+CGG	0.583680	6.2:+58914767	None:intergenic
TCCTCACACCCCTATATACC+GGG	0.585609	6.2:+58915018	None:intergenic
TTTACAAGTAACAACGGGGA+GGG	0.587349	6.2:-58915104	MS.gene30845:CDS
CAAGTAACAACGGGGAGGGG+CGG	0.588787	6.2:-58915100	MS.gene30845:CDS
TAGTGACATTGACACGGTTG+TGG	0.591596	6.2:-58914733	MS.gene30845:CDS
TCAACTTTGCAGACTCGGTG+TGG	0.601701	6.2:-58914851	MS.gene30845:CDS
TGTGGCTGTTGTCGTTGCAG+TGG	0.604136	6.2:-58914715	MS.gene30845:CDS
ACTTTGCAGACTCGGTGTGG+AGG	0.609381	6.2:-58914848	MS.gene30845:CDS
GTTGCTTCAATGGCATTAAG+GGG	0.609844	6.2:-58914888	MS.gene30845:CDS
TGTTGAATATGCCAGAGTTG+TGG	0.615027	6.2:-58914635	MS.gene30845:CDS
TGTCGTTGCAGTGGAAGAAG+AGG	0.624573	6.2:-58914706	MS.gene30845:CDS
GATATGTTTACAAGTAACAA+CGG	0.629910	6.2:-58915110	MS.gene30845:CDS
ACTCGCCACCCGGTATATAG+GGG	0.659441	6.2:-58915026	MS.gene30845:CDS
ACCCGGTATATAGGGGTGTG+AGG	0.669533	6.2:-58915019	MS.gene30845:CDS
AATGACTAGTGACATTGACA+CGG	0.673366	6.2:-58914739	MS.gene30845:CDS
ACAAGACTTTCAATATGAGG+AGG	0.676699	6.2:-58914550	MS.gene30845:CDS
TGAATATGCCAGAGTTGTGG+AGG	0.686416	6.2:-58914632	MS.gene30845:CDS
GTTTACAAGTAACAACGGGG+AGG	0.703815	6.2:-58915105	MS.gene30845:CDS
ATGCTCCATACTATGTGTAG+GGG	0.710393	6.2:+58914593	None:intergenic
TCACACCCCTATATACCGGG+TGG	0.772358	6.2:+58915021	None:intergenic
TATGTTTACAAGTAACAACG+GGG	0.831032	6.2:-58915108	MS.gene30845:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AGTACAAGACTTTCAATATG+AGG	-	chr6.2:58915084-58915103	MS.gene30845:CDS	30.0%
	CAAACAAGAAGACTAAGATT+TGG	-	chr6.2:58914681-58914700	MS.gene30845:CDS	30.0%
	GAAGAGGAACTTAGATAAAT+GGG	-	chr6.2:58914640-58914659	MS.gene30845:CDS	30.0%
!	ATAAATGGGTTTGTGAAATG+AGG	-	chr6.2:58914654-58914673	MS.gene30845:CDS	30.0%
!	CAAATCTTAGTCTTCTTGTT+TGG	+	chr6.2:58914683-58914702	None:intergenic	30.0%
!	TAAATGGGTTTGTGAAATGA+GGG	-	chr6.2:58914655-58914674	MS.gene30845:CDS	30.0%
	AAGAAGACTAAGATTTGGCT+AGG	-	chr6.2:58914686-58914705	MS.gene30845:CDS	35.0%
	AATGACTAGTGACATTGACA+CGG	-	chr6.2:58914898-58914917	MS.gene30845:CDS	35.0%
	ACAAGACTTTCAATATGAGG+AGG	-	chr6.2:58915087-58915106	MS.gene30845:CDS	35.0%
	GGAAGAGGAACTTAGATAAA+TGG	-	chr6.2:58914639-58914658	MS.gene30845:CDS	35.0%
	TGAGGCAAAAGACATTCAAA+GGG	-	chr6.2:58914832-58914851	MS.gene30845:CDS	35.0%
!	ATGTTGCTTCAATGGCATTA+AGG	-	chr6.2:58914747-58914766	MS.gene30845:CDS	35.0%
!	CTAGTCATTAAAGTCTTGTC+TGG	+	chr6.2:58914887-58914906	None:intergenic	35.0%
!	TGTTGCTTCAATGGCATTAA+GGG	-	chr6.2:58914748-58914767	MS.gene30845:CDS	35.0%
!!	AATATGAGGAGGTATCACTA+TGG	-	chr6.2:58915098-58915117	MS.gene30845:CDS	35.0%
	AATGTCCCCTACACATAGTA+TGG	-	chr6.2:58915039-58915058	MS.gene30845:CDS	40.0%
	ATGCTCCATACTATGTGTAG+GGG	+	chr6.2:58915047-58915066	None:intergenic	40.0%
	CATGCTCCATACTATGTGTA+GGG	+	chr6.2:58915048-58915067	None:intergenic	40.0%
	CTGAGGCAAAAGACATTCAA+AGG	-	chr6.2:58914831-58914850	MS.gene30845:CDS	40.0%
	GTTGCTTCAATGGCATTAAG+GGG	-	chr6.2:58914749-58914768	MS.gene30845:CDS	40.0%
	TCATGCTCCATACTATGTGT+AGG	+	chr6.2:58915049-58915068	None:intergenic	40.0%
	TGTTGAAGTCGAAGAAGAAG+AGG	-	chr6.2:58914976-58914995	MS.gene30845:CDS	40.0%
	TGTTGAATATGCCAGAGTTG+TGG	-	chr6.2:58915002-58915021	MS.gene30845:CDS	40.0%
	TTTACAAGTAACAACGGGGA+GGG	-	chr6.2:58914533-58914552	MS.gene30845:CDS	40.0%
!	TTGAATGTCTTTTGCCTCAG+CGG	+	chr6.2:58914831-58914850	None:intergenic	40.0%
	AGCAGGGAGGAAGAAGTTTA+AGG	-	chr6.2:58914586-58914605	MS.gene30845:CDS	45.0%
	AGTTGCCCAAAAAAACCAGC+AGG	-	chr6.2:58914569-58914588	MS.gene30845:CDS	45.0%
	CTGTCTCAACTTTGCAGACT+CGG	-	chr6.2:58914781-58914800	MS.gene30845:CDS	45.0%
	GTTGCCCAAAAAAACCAGCA+GGG	-	chr6.2:58914570-58914589	MS.gene30845:CDS	45.0%
	GTTTACAAGTAACAACGGGG+AGG	-	chr6.2:58914532-58914551	MS.gene30845:CDS	45.0%
	TAGTGACATTGACACGGTTG+TGG	-	chr6.2:58914904-58914923	MS.gene30845:CDS	45.0%
	TGAATATGCCAGAGTTGTGG+AGG	-	chr6.2:58915005-58915024	MS.gene30845:CDS	45.0%
	TTAAACTTCTTCCTCCCTGC+TGG	+	chr6.2:58914587-58914606	None:intergenic	45.0%
	TTACAAGTAACAACGGGGAG+GGG	-	chr6.2:58914534-58914553	MS.gene30845:CDS	45.0%
	TTCCTCACACCCCTATATAC+CGG	+	chr6.2:58914623-58914642	None:intergenic	45.0%
	TTGAAGCAACATCATGTGCC+CGG	+	chr6.2:58914739-58914758	None:intergenic	45.0%
!	GGCACATGATGTTGCTTCAA+TGG	-	chr6.2:58914739-58914758	MS.gene30845:CDS	45.0%
!	TATATAGGGGTGTGAGGAAG+AGG	-	chr6.2:58914624-58914643	MS.gene30845:CDS	45.0%
!!!	TCCTCCCTGCTGGTTTTTTT+GGG	+	chr6.2:58914577-58914596	None:intergenic	45.0%
!!!	TGGTTTTTTTGGGCAACTCG+CGG	+	chr6.2:58914567-58914586	None:intergenic	45.0%
!!!	TTCCTCCCTGCTGGTTTTTT+TGG	+	chr6.2:58914578-58914597	None:intergenic	45.0%
	CGAGTCTGCAAAGTTGAGAC+AGG	+	chr6.2:58914783-58914802	None:intergenic	50.0%
	CTTGTCTGGTCTGAAAGCCT+CGG	+	chr6.2:58914873-58914892	None:intergenic	50.0%
	GCCAGAGTTGTGGAGGAATA+TGG	-	chr6.2:58915012-58915031	MS.gene30845:CDS	50.0%
	GCCATATTCCTCCACAACTC+TGG	+	chr6.2:58915016-58915035	None:intergenic	50.0%
	TCCTCACACCCCTATATACC+GGG	+	chr6.2:58914622-58914641	None:intergenic	50.0%
	TGAAGCAACATCATGTGCCC+GGG	+	chr6.2:58914738-58914757	None:intergenic	50.0%
	TGTCGTTGCAGTGGAAGAAG+AGG	-	chr6.2:58914931-58914950	MS.gene30845:CDS	50.0%
!	AATGTCTTTTGCCTCAGCGG+TGG	+	chr6.2:58914828-58914847	None:intergenic	50.0%
!	CACTTTTCCAACTGCCGAGA+TGG	-	chr6.2:58914709-58914728	MS.gene30845:CDS	50.0%
!!	TCAACTTTGCAGACTCGGTG+TGG	-	chr6.2:58914786-58914805	MS.gene30845:CDS	50.0%
	ACTCGCCACCCGGTATATAG+GGG	-	chr6.2:58914611-58914630	MS.gene30845:CDS	55.0%
	AGACTCGCCACCCGGTATAT+AGG	-	chr6.2:58914609-58914628	MS.gene30845:CDS	55.0%
	GACTCGCCACCCGGTATATA+GGG	-	chr6.2:58914610-58914629	MS.gene30845:CDS	55.0%
	GCCCAAAAAAACCAGCAGGG+AGG	-	chr6.2:58914573-58914592	MS.gene30845:CDS	55.0%
	GTTTAAGGAGACTCGCCACC+CGG	-	chr6.2:58914601-58914620	MS.gene30845:CDS	55.0%
	TCACACCCCTATATACCGGG+TGG	+	chr6.2:58914619-58914638	None:intergenic	55.0%
	TGTGGCTGTTGTCGTTGCAG+TGG	-	chr6.2:58914922-58914941	MS.gene30845:CDS	55.0%
!	ACCCGGTATATAGGGGTGTG+AGG	-	chr6.2:58914618-58914637	MS.gene30845:CDS	55.0%
!!	ACTTTGCAGACTCGGTGTGG+AGG	-	chr6.2:58914789-58914808	MS.gene30845:CDS	55.0%
	CAAGTAACAACGGGGAGGGG+CGG	-	chr6.2:58914537-58914556	MS.gene30845:CDS	60.0%
	TCCTATTCCTGCCACCGCTG+AGG	-	chr6.2:58914814-58914833	MS.gene30845:CDS	60.0%
!	TCTTTTGCCTCAGCGGTGGC+AGG	+	chr6.2:58914824-58914843	None:intergenic	60.0%
	AACTGCCGAGATGGCAGCCC+GGG	-	chr6.2:58914718-58914737	MS.gene30845:CDS	65.0%
	ATGTGCCCGGGCTGCCATCT+CGG	+	chr6.2:58914726-58914745	None:intergenic	65.0%
	CAACTGCCGAGATGGCAGCC+CGG	-	chr6.2:58914717-58914736	MS.gene30845:CDS	65.0%
	GCCTCAGCGGTGGCAGGAAT+AGG	+	chr6.2:58914818-58914837	None:intergenic	65.0%
	CGGGCTGCCATCTCGGCAGT+TGG	+	chr6.2:58914719-58914738	None:intergenic	70.0%
	GGCAGCTGCAGAAGCTGCCG+AGG	-	chr6.2:58914853-58914872	MS.gene30845:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.2	gene	58914530	58915129	58914530	ID=MS.gene30845
chr6.2	mRNA	58914530	58915129	58914530	ID=MS.gene30845.t1;Parent=MS.gene30845
chr6.2	exon	58914530	58915129	58914530	ID=MS.gene30845.t1.exon1;Parent=MS.gene30845.t1
chr6.2	CDS	58914530	58915129	58914530	ID=cds.MS.gene30845.t1;Parent=MS.gene30845.t1

Gene Sequence

>MS.gene30845

ATGTTTACAAGTAACAACGGGGAGGGGCGGTTAGCCGCGAGTTGCCCAAAAAAACCAGCAGGGAGGAAGAAGTTTAAGGAGACTCGCCACCCGGTATATAGGGGTGTGAGGAAGAGGAACTTAGATAAATGGGTTTGTGAAATGAGGGAGCCAAACAAGAAGACTAAGATTTGGCTAGGCACTTTTCCAACTGCCGAGATGGCAGCCCGGGCACATGATGTTGCTTCAATGGCATTAAGGGGACGCTACGCCTGTCTCAACTTTGCAGACTCGGTGTGGAGGCTTCCTATTCCTGCCACCGCTGAGGCAAAAGACATTCAAAGGGCAGCTGCAGAAGCTGCCGAGGCTTTCAGACCAGACAAGACTTTAATGACTAGTGACATTGACACGGTTGTGGCTGTTGTCGTTGCAGTGGAAGAAGAGGAAGAACTGTTGAATATGTTTTGTGTTGAAGTCGAAGAAGAAGAGGAAGTGTTGAATATGCCAGAGTTGTGGAGGAATATGGCACTAATGTCCCCTACACATAGTATGGAGCATGAGTATGAAGATTTTGAAGTACAAGACTTTCAATATGAGGAGGTATCACTATGGAACTTCTAA

Protein sequence

>MS.gene30845.t1

MFTSNNGEGRLAASCPKKPAGRKKFKETRHPVYRGVRKRNLDKWVCEMREPNKKTKIWLGTFPTAEMAARAHDVASMALRGRYACLNFADSVWRLPIPATAEAKDIQRAAAEAAEAFRPDKTLMTSDIDTVVAVVVAVEEEEELLNMFCVEVEEEEEVLNMPELWRNMALMSPTHSMEHEYEDFEVQDFQYEEVSLWNF