Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79326.t1 | AGR40683.1 | 88.6 | 228 | 23 | 2 | 1 | 226 | 1 | 227 | 1.20E-106 | 396 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79326.t1 | Q9M0L0 | 56.7 | 194 | 69 | 4 | 42 | 226 | 29 | 216 | 1.5e-49 | 197.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79326.t1 | S5MAB5 | 88.6 | 228 | 23 | 2 | 1 | 226 | 1 | 227 | 8.6e-107 | 396.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene79326.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79326.t1 | MTR_6g465690 | 88.596 | 228 | 20 | 3 | 1 | 223 | 1 | 227 | 3.55e-141 | 395 |
MS.gene79326.t1 | MTR_6g466000 | 76.526 | 213 | 34 | 3 | 26 | 226 | 19 | 227 | 2.52e-113 | 323 |
MS.gene79326.t1 | MTR_6g465450 | 72.273 | 220 | 49 | 5 | 3 | 218 | 1 | 212 | 1.76e-105 | 304 |
MS.gene79326.t1 | MTR_6g465420 | 74.863 | 183 | 43 | 2 | 39 | 218 | 29 | 211 | 5.11e-100 | 291 |
MS.gene79326.t1 | MTR_6g465460 | 75.410 | 183 | 41 | 3 | 39 | 218 | 29 | 210 | 2.61e-99 | 290 |
MS.gene79326.t1 | MTR_6g465430 | 75.135 | 185 | 43 | 2 | 37 | 218 | 27 | 211 | 4.75e-98 | 286 |
MS.gene79326.t1 | MTR_6g466130 | 73.558 | 208 | 47 | 4 | 23 | 226 | 25 | 228 | 3.20e-97 | 283 |
MS.gene79326.t1 | MTR_6g465530 | 70.854 | 199 | 45 | 4 | 36 | 226 | 5 | 198 | 2.34e-92 | 269 |
MS.gene79326.t1 | MTR_6g465510 | 70.673 | 208 | 40 | 4 | 36 | 226 | 5 | 208 | 2.76e-90 | 265 |
MS.gene79326.t1 | MTR_6g465990 | 65.278 | 216 | 39 | 4 | 23 | 226 | 2 | 193 | 1.77e-84 | 249 |
MS.gene79326.t1 | MTR_6g465850 | 54.365 | 252 | 53 | 4 | 33 | 226 | 32 | 279 | 1.96e-77 | 234 |
MS.gene79326.t1 | MTR_1g101600 | 64.706 | 187 | 59 | 3 | 42 | 226 | 19 | 200 | 4.24e-76 | 228 |
MS.gene79326.t1 | MTR_6g466020 | 56.436 | 202 | 64 | 4 | 23 | 223 | 2 | 180 | 4.01e-69 | 210 |
MS.gene79326.t1 | MTR_5g010940 | 40.329 | 243 | 112 | 5 | 1 | 226 | 1 | 227 | 3.39e-53 | 171 |
MS.gene79326.t1 | MTR_5g010930 | 45.894 | 207 | 87 | 6 | 39 | 226 | 24 | 224 | 4.99e-53 | 170 |
MS.gene79326.t1 | MTR_4g102660 | 51.456 | 206 | 82 | 7 | 36 | 226 | 16 | 218 | 7.45e-51 | 165 |
MS.gene79326.t1 | MTR_5g010910 | 41.704 | 223 | 106 | 5 | 22 | 226 | 6 | 222 | 2.20e-50 | 164 |
MS.gene79326.t1 | MTR_3g110205 | 57.292 | 96 | 41 | 0 | 59 | 154 | 38 | 133 | 7.60e-33 | 117 |
MS.gene79326.t1 | MTR_8g006410 | 65.385 | 78 | 27 | 0 | 61 | 138 | 49 | 126 | 1.25e-31 | 115 |
MS.gene79326.t1 | MTR_7g046260 | 64.198 | 81 | 29 | 0 | 58 | 138 | 55 | 135 | 3.94e-31 | 114 |
MS.gene79326.t1 | MTR_7g117690 | 63.750 | 80 | 29 | 0 | 59 | 138 | 23 | 102 | 1.11e-30 | 111 |
MS.gene79326.t1 | MTR_5g012910 | 62.025 | 79 | 30 | 0 | 60 | 138 | 24 | 102 | 8.15e-30 | 109 |
MS.gene79326.t1 | MTR_2g085015 | 57.778 | 90 | 36 | 2 | 58 | 145 | 41 | 130 | 1.62e-29 | 110 |
MS.gene79326.t1 | MTR_8g013860 | 53.608 | 97 | 44 | 1 | 43 | 138 | 25 | 121 | 1.59e-28 | 107 |
MS.gene79326.t1 | MTR_8g102800 | 53.465 | 101 | 47 | 0 | 54 | 154 | 27 | 127 | 2.73e-28 | 107 |
MS.gene79326.t1 | MTR_2g101340 | 52.475 | 101 | 42 | 2 | 44 | 138 | 15 | 115 | 3.67e-28 | 106 |
MS.gene79326.t1 | MTR_8g027465 | 50.000 | 106 | 50 | 1 | 36 | 138 | 11 | 116 | 1.22e-27 | 103 |
MS.gene79326.t1 | MTR_6g088405 | 58.974 | 78 | 32 | 0 | 61 | 138 | 41 | 118 | 3.49e-27 | 103 |
MS.gene79326.t1 | MTR_4g102670 | 40.462 | 173 | 81 | 6 | 60 | 226 | 11 | 167 | 5.72e-27 | 102 |
MS.gene79326.t1 | MTR_4g100650 | 58.974 | 78 | 32 | 0 | 61 | 138 | 71 | 148 | 4.42e-25 | 99.4 |
MS.gene79326.t1 | MTR_6g088425 | 48.246 | 114 | 49 | 1 | 42 | 145 | 17 | 130 | 9.52e-24 | 95.5 |
MS.gene79326.t1 | MTR_4g035430 | 47.423 | 97 | 46 | 1 | 49 | 145 | 22 | 113 | 2.71e-22 | 91.3 |
MS.gene79326.t1 | MTR_1g006660 | 54.255 | 94 | 39 | 1 | 49 | 138 | 28 | 121 | 4.36e-22 | 91.3 |
MS.gene79326.t1 | MTR_5g008590 | 49.541 | 109 | 54 | 1 | 64 | 172 | 11 | 118 | 2.73e-19 | 82.4 |
MS.gene79326.t1 | MTR_5g008550 | 46.000 | 100 | 52 | 1 | 64 | 161 | 21 | 120 | 4.61e-19 | 82.0 |
MS.gene79326.t1 | MTR_1g101550 | 34.857 | 175 | 101 | 2 | 64 | 226 | 57 | 230 | 9.52e-18 | 79.3 |
MS.gene79326.t1 | MTR_1g014780 | 35.115 | 131 | 72 | 2 | 33 | 150 | 1 | 131 | 1.92e-17 | 78.6 |
MS.gene79326.t1 | MTR_2g435590 | 37.692 | 130 | 75 | 2 | 5 | 134 | 43 | 166 | 2.62e-17 | 78.6 |
MS.gene79326.t1 | MTR_5g008470 | 44.048 | 84 | 47 | 0 | 66 | 149 | 77 | 160 | 1.01e-16 | 75.5 |
MS.gene79326.t1 | MTR_1g014820 | 36.000 | 125 | 64 | 2 | 63 | 183 | 26 | 138 | 1.14e-16 | 77.0 |
MS.gene79326.t1 | MTR_3g102100 | 40.541 | 111 | 59 | 3 | 64 | 172 | 45 | 150 | 1.61e-16 | 74.7 |
MS.gene79326.t1 | MTR_3g105510 | 44.186 | 86 | 44 | 1 | 64 | 145 | 37 | 122 | 2.12e-16 | 75.9 |
MS.gene79326.t1 | MTR_5g083340 | 58.621 | 58 | 24 | 0 | 64 | 121 | 85 | 142 | 4.84e-16 | 76.6 |
MS.gene79326.t1 | MTR_2g105380 | 43.333 | 90 | 46 | 1 | 52 | 136 | 105 | 194 | 5.94e-16 | 75.9 |
MS.gene79326.t1 | MTR_1g060910 | 32.558 | 172 | 69 | 6 | 48 | 196 | 3 | 150 | 6.03e-16 | 73.2 |
MS.gene79326.t1 | MTR_2g043050 | 44.706 | 85 | 47 | 0 | 63 | 147 | 18 | 102 | 8.63e-16 | 73.6 |
MS.gene79326.t1 | MTR_1g090170 | 42.697 | 89 | 45 | 1 | 59 | 147 | 147 | 229 | 8.96e-16 | 75.1 |
MS.gene79326.t1 | MTR_1g090170 | 42.697 | 89 | 45 | 1 | 59 | 147 | 234 | 316 | 1.50e-15 | 75.1 |
MS.gene79326.t1 | MTR_1g014860 | 33.858 | 127 | 72 | 2 | 39 | 158 | 2 | 123 | 1.52e-15 | 73.2 |
MS.gene79326.t1 | MTR_3g074130 | 57.895 | 57 | 24 | 0 | 63 | 119 | 149 | 205 | 2.30e-15 | 74.3 |
MS.gene79326.t1 | MTR_1g087920 | 44.872 | 78 | 43 | 0 | 54 | 131 | 67 | 144 | 2.32e-15 | 73.9 |
MS.gene79326.t1 | MTR_5g062700 | 55.932 | 59 | 26 | 0 | 63 | 121 | 172 | 230 | 2.34e-15 | 74.3 |
MS.gene79326.t1 | MTR_1g019110 | 43.333 | 90 | 43 | 1 | 64 | 145 | 44 | 133 | 2.72e-15 | 71.6 |
MS.gene79326.t1 | MTR_8g090350 | 46.053 | 76 | 38 | 1 | 63 | 135 | 112 | 187 | 2.72e-15 | 73.6 |
MS.gene79326.t1 | MTR_8g092460 | 55.000 | 60 | 27 | 0 | 64 | 123 | 145 | 204 | 3.96e-15 | 73.2 |
MS.gene79326.t1 | MTR_2g090235 | 55.932 | 59 | 26 | 0 | 63 | 121 | 217 | 275 | 4.42e-15 | 73.9 |
MS.gene79326.t1 | MTR_7g020980 | 51.667 | 60 | 29 | 0 | 60 | 119 | 47 | 106 | 5.38e-15 | 70.9 |
MS.gene79326.t1 | MTR_7g021010 | 53.125 | 64 | 29 | 1 | 57 | 119 | 4 | 67 | 7.22e-15 | 69.3 |
MS.gene79326.t1 | MTR_3g105480 | 44.048 | 84 | 43 | 1 | 66 | 145 | 33 | 116 | 8.35e-15 | 71.2 |
MS.gene79326.t1 | MTR_2g043030 | 40.659 | 91 | 54 | 0 | 63 | 153 | 18 | 108 | 1.04e-14 | 70.5 |
MS.gene79326.t1 | MTR_7g021010 | 51.667 | 60 | 29 | 0 | 60 | 119 | 47 | 106 | 1.25e-14 | 69.7 |
MS.gene79326.t1 | MTR_5g083330 | 49.315 | 73 | 37 | 0 | 49 | 121 | 20 | 92 | 1.39e-14 | 71.6 |
MS.gene79326.t1 | MTR_1g014800 | 51.667 | 60 | 29 | 0 | 63 | 122 | 30 | 89 | 1.41e-14 | 70.5 |
MS.gene79326.t1 | MTR_4g086220 | 57.143 | 56 | 24 | 0 | 64 | 119 | 96 | 151 | 1.44e-14 | 70.9 |
MS.gene79326.t1 | MTR_3g053690 | 56.250 | 64 | 25 | 1 | 56 | 119 | 22 | 82 | 1.45e-14 | 70.5 |
MS.gene79326.t1 | MTR_1g028560 | 41.463 | 82 | 43 | 1 | 64 | 145 | 115 | 191 | 1.95e-14 | 71.6 |
MS.gene79326.t1 | MTR_5g016750 | 55.357 | 56 | 25 | 0 | 64 | 119 | 25 | 80 | 1.95e-14 | 69.3 |
MS.gene79326.t1 | MTR_5g082950 | 58.929 | 56 | 23 | 0 | 64 | 119 | 66 | 121 | 2.12e-14 | 71.2 |
MS.gene79326.t1 | MTR_2g089170 | 57.143 | 56 | 24 | 0 | 64 | 119 | 65 | 120 | 2.54e-14 | 68.9 |
MS.gene79326.t1 | MTR_8g022820 | 42.683 | 82 | 44 | 1 | 54 | 135 | 114 | 192 | 2.57e-14 | 71.2 |
MS.gene79326.t1 | MTR_8g022820 | 42.683 | 82 | 44 | 1 | 54 | 135 | 114 | 192 | 2.57e-14 | 71.2 |
MS.gene79326.t1 | MTR_8g022820 | 42.683 | 82 | 44 | 1 | 54 | 135 | 113 | 191 | 2.71e-14 | 71.2 |
MS.gene79326.t1 | MTR_2g078680 | 46.067 | 89 | 41 | 2 | 35 | 119 | 1 | 86 | 2.75e-14 | 69.3 |
MS.gene79326.t1 | MTR_4g086160 | 55.357 | 56 | 25 | 0 | 64 | 119 | 96 | 151 | 4.27e-14 | 69.3 |
MS.gene79326.t1 | MTR_7g028925 | 53.333 | 60 | 25 | 1 | 63 | 122 | 28 | 84 | 4.85e-14 | 65.9 |
MS.gene79326.t1 | MTR_4g086190 | 55.357 | 56 | 25 | 0 | 64 | 119 | 96 | 151 | 5.77e-14 | 68.9 |
MS.gene79326.t1 | MTR_4g086165 | 55.357 | 56 | 25 | 0 | 64 | 119 | 82 | 137 | 6.87e-14 | 68.2 |
MS.gene79326.t1 | MTR_0939s0010 | 55.357 | 56 | 25 | 0 | 64 | 119 | 65 | 120 | 9.07e-14 | 67.8 |
MS.gene79326.t1 | MTR_7g092190 | 57.143 | 56 | 24 | 0 | 64 | 119 | 30 | 85 | 9.51e-14 | 69.3 |
MS.gene79326.t1 | MTR_1g074310 | 56.140 | 57 | 24 | 1 | 64 | 119 | 21 | 77 | 1.33e-13 | 66.2 |
MS.gene79326.t1 | MTR_2g015050 | 49.275 | 69 | 34 | 1 | 52 | 119 | 122 | 190 | 1.42e-13 | 68.6 |
MS.gene79326.t1 | MTR_5g009620 | 40.217 | 92 | 49 | 1 | 34 | 119 | 76 | 167 | 2.12e-13 | 68.2 |
MS.gene79326.t1 | MTR_4g114570 | 46.479 | 71 | 31 | 1 | 64 | 134 | 7 | 70 | 3.84e-13 | 66.2 |
MS.gene79326.t1 | MTR_2g438180 | 55.932 | 59 | 25 | 1 | 64 | 121 | 14 | 72 | 3.91e-13 | 64.7 |
MS.gene79326.t1 | MTR_4g010640 | 53.571 | 56 | 26 | 0 | 64 | 119 | 7 | 62 | 5.90e-13 | 65.9 |
MS.gene79326.t1 | MTR_4g078710 | 53.571 | 56 | 26 | 0 | 64 | 119 | 28 | 83 | 6.21e-13 | 65.9 |
MS.gene79326.t1 | MTR_2g014340 | 47.887 | 71 | 34 | 1 | 49 | 119 | 7 | 74 | 6.55e-13 | 65.5 |
MS.gene79326.t1 | MTR_2g043020 | 38.710 | 93 | 57 | 0 | 63 | 155 | 18 | 110 | 6.93e-13 | 65.5 |
MS.gene79326.t1 | MTR_3g106290 | 57.143 | 56 | 24 | 0 | 64 | 119 | 8 | 63 | 7.34e-13 | 65.1 |
MS.gene79326.t1 | MTR_3g090760 | 39.560 | 91 | 46 | 1 | 40 | 130 | 98 | 179 | 7.79e-13 | 67.0 |
MS.gene79326.t1 | MTR_1g048610 | 37.500 | 104 | 62 | 2 | 17 | 119 | 44 | 145 | 8.09e-13 | 65.9 |
MS.gene79326.t1 | MTR_1g070070 | 52.632 | 57 | 26 | 1 | 64 | 119 | 21 | 77 | 9.62e-13 | 63.9 |
MS.gene79326.t1 | MTR_4g008860 | 57.143 | 56 | 24 | 0 | 64 | 119 | 8 | 63 | 9.93e-13 | 65.1 |
MS.gene79326.t1 | MTR_2g043040 | 40.000 | 85 | 51 | 0 | 63 | 147 | 18 | 102 | 1.40e-12 | 65.1 |
MS.gene79326.t1 | MTR_5g085100 | 40.566 | 106 | 47 | 3 | 24 | 129 | 15 | 104 | 1.49e-12 | 65.9 |
MS.gene79326.t1 | MTR_2g103700 | 51.786 | 56 | 27 | 0 | 64 | 119 | 7 | 62 | 1.74e-12 | 63.9 |
MS.gene79326.t1 | MTR_4g100450 | 41.667 | 84 | 48 | 1 | 37 | 119 | 127 | 210 | 1.79e-12 | 65.9 |
MS.gene79326.t1 | MTR_1g074230 | 54.386 | 57 | 25 | 1 | 64 | 119 | 19 | 75 | 2.01e-12 | 62.8 |
MS.gene79326.t1 | MTR_2g014300 | 55.357 | 56 | 25 | 0 | 64 | 119 | 15 | 70 | 2.36e-12 | 63.5 |
MS.gene79326.t1 | MTR_1g074250 | 50.820 | 61 | 28 | 1 | 61 | 119 | 16 | 76 | 3.40e-12 | 62.0 |
MS.gene79326.t1 | MTR_3g072610 | 47.191 | 89 | 43 | 2 | 64 | 148 | 25 | 113 | 3.44e-12 | 63.9 |
MS.gene79326.t1 | MTR_2g016730 | 39.560 | 91 | 49 | 2 | 53 | 142 | 11 | 96 | 3.66e-12 | 65.1 |
MS.gene79326.t1 | MTR_4g100420 | 45.946 | 74 | 37 | 2 | 47 | 119 | 142 | 213 | 5.10e-12 | 64.3 |
MS.gene79326.t1 | MTR_4g054360 | 47.692 | 65 | 33 | 1 | 56 | 119 | 116 | 180 | 1.54e-11 | 62.8 |
MS.gene79326.t1 | MTR_4g088005 | 44.928 | 69 | 37 | 1 | 52 | 119 | 45 | 113 | 2.43e-11 | 59.7 |
MS.gene79326.t1 | MTR_5g085070 | 47.297 | 74 | 29 | 2 | 56 | 129 | 46 | 109 | 2.77e-11 | 62.0 |
MS.gene79326.t1 | MTR_1g090290 | 48.387 | 62 | 29 | 2 | 59 | 119 | 110 | 169 | 2.90e-11 | 60.8 |
MS.gene79326.t1 | MTR_8g099215 | 38.710 | 93 | 51 | 1 | 33 | 119 | 70 | 162 | 3.06e-11 | 62.0 |
MS.gene79326.t1 | MTR_4g111915 | 44.068 | 59 | 33 | 0 | 64 | 122 | 53 | 111 | 4.11e-11 | 59.3 |
MS.gene79326.t1 | MTR_6g041970 | 39.560 | 91 | 42 | 1 | 64 | 154 | 18 | 95 | 4.81e-11 | 58.2 |
MS.gene79326.t1 | MTR_4g054740 | 46.154 | 65 | 34 | 1 | 56 | 119 | 89 | 153 | 4.87e-11 | 60.8 |
MS.gene79326.t1 | MTR_5g075570 | 45.000 | 60 | 33 | 0 | 60 | 119 | 120 | 179 | 5.41e-11 | 61.2 |
MS.gene79326.t1 | MTR_8g069360 | 50.000 | 56 | 28 | 0 | 64 | 119 | 44 | 99 | 6.09e-11 | 61.6 |
MS.gene79326.t1 | MTR_6g012970 | 38.202 | 89 | 47 | 1 | 31 | 119 | 13 | 93 | 8.48e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79326.t1 | AT4G25470 | 55.612 | 196 | 70 | 4 | 41 | 226 | 28 | 216 | 1.64e-66 | 204 |
MS.gene79326.t1 | AT4G25480 | 56.923 | 195 | 67 | 4 | 42 | 226 | 29 | 216 | 1.89e-63 | 197 |
MS.gene79326.t1 | AT5G51990 | 51.500 | 200 | 75 | 4 | 41 | 226 | 31 | 222 | 4.72e-63 | 196 |
MS.gene79326.t1 | AT1G63030 | 50.515 | 194 | 81 | 4 | 35 | 226 | 1 | 181 | 4.78e-60 | 187 |
MS.gene79326.t1 | AT1G63030 | 50.515 | 194 | 81 | 4 | 35 | 226 | 1 | 181 | 4.78e-60 | 187 |
MS.gene79326.t1 | AT4G25490 | 56.633 | 196 | 66 | 4 | 42 | 226 | 26 | 213 | 7.84e-60 | 187 |
MS.gene79326.t1 | AT1G12610 | 68.103 | 116 | 37 | 0 | 35 | 150 | 1 | 116 | 2.26e-56 | 178 |
MS.gene79326.t1 | AT5G25810 | 58.511 | 94 | 38 | 1 | 53 | 145 | 24 | 117 | 9.23e-33 | 118 |
MS.gene79326.t1 | AT2G35700 | 48.120 | 133 | 69 | 0 | 59 | 191 | 40 | 172 | 1.51e-31 | 114 |
MS.gene79326.t1 | AT5G11590 | 57.143 | 98 | 39 | 1 | 48 | 145 | 38 | 132 | 3.07e-31 | 115 |
MS.gene79326.t1 | AT2G44940 | 54.286 | 105 | 48 | 0 | 53 | 157 | 89 | 193 | 7.13e-31 | 115 |
MS.gene79326.t1 | AT4G32800 | 50.467 | 107 | 47 | 1 | 51 | 151 | 6 | 112 | 1.23e-30 | 113 |
MS.gene79326.t1 | AT1G01250 | 60.000 | 80 | 32 | 0 | 59 | 138 | 40 | 119 | 1.34e-27 | 104 |
MS.gene79326.t1 | AT3G16280 | 59.494 | 79 | 32 | 0 | 60 | 138 | 57 | 135 | 1.39e-27 | 105 |
MS.gene79326.t1 | AT4G16750 | 50.000 | 112 | 50 | 2 | 34 | 139 | 4 | 115 | 1.95e-27 | 103 |
MS.gene79326.t1 | AT3G16280 | 59.494 | 79 | 32 | 0 | 60 | 138 | 75 | 153 | 2.28e-27 | 105 |
MS.gene79326.t1 | AT2G36450 | 40.000 | 190 | 90 | 6 | 52 | 226 | 3 | 183 | 1.45e-25 | 99.0 |
MS.gene79326.t1 | AT2G25820 | 60.526 | 76 | 30 | 0 | 63 | 138 | 25 | 100 | 1.75e-25 | 99.8 |
MS.gene79326.t1 | AT5G52020 | 40.678 | 177 | 89 | 6 | 60 | 226 | 61 | 231 | 2.47e-25 | 99.4 |
MS.gene79326.t1 | AT3G60490 | 60.000 | 75 | 30 | 0 | 64 | 138 | 71 | 145 | 3.21e-25 | 99.8 |
MS.gene79326.t1 | AT1G71450 | 38.519 | 135 | 83 | 0 | 64 | 198 | 24 | 158 | 2.01e-22 | 90.5 |
MS.gene79326.t1 | AT2G47520 | 44.330 | 97 | 50 | 1 | 23 | 119 | 13 | 105 | 1.44e-20 | 85.5 |
MS.gene79326.t1 | AT1G33760 | 36.095 | 169 | 94 | 3 | 64 | 225 | 20 | 181 | 2.33e-20 | 85.1 |
MS.gene79326.t1 | AT1G21910 | 47.826 | 92 | 41 | 1 | 64 | 148 | 50 | 141 | 4.23e-19 | 82.8 |
MS.gene79326.t1 | AT1G77200 | 57.143 | 77 | 33 | 0 | 62 | 138 | 41 | 117 | 7.06e-19 | 82.8 |
MS.gene79326.t1 | AT1G12630 | 39.037 | 187 | 85 | 6 | 60 | 226 | 15 | 192 | 1.08e-18 | 80.9 |
MS.gene79326.t1 | AT1G22190 | 41.964 | 112 | 50 | 2 | 10 | 121 | 44 | 140 | 5.95e-18 | 80.5 |
MS.gene79326.t1 | AT4G13620 | 51.282 | 78 | 37 | 1 | 45 | 121 | 212 | 289 | 7.46e-18 | 81.6 |
MS.gene79326.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 59 | 121 | 27 | 88 | 1.20e-17 | 77.0 |
MS.gene79326.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 59 | 121 | 27 | 88 | 1.45e-17 | 77.0 |
MS.gene79326.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 59 | 121 | 27 | 88 | 1.45e-17 | 77.0 |
MS.gene79326.t1 | AT3G16770 | 52.564 | 78 | 30 | 1 | 44 | 121 | 66 | 136 | 1.65e-17 | 79.0 |
MS.gene79326.t1 | AT4G39780 | 55.738 | 61 | 27 | 0 | 59 | 119 | 88 | 148 | 6.27e-17 | 77.8 |
MS.gene79326.t1 | AT5G21960 | 46.429 | 84 | 45 | 0 | 62 | 145 | 5 | 88 | 8.57e-17 | 76.3 |
MS.gene79326.t1 | AT1G74930 | 43.023 | 86 | 49 | 0 | 64 | 149 | 21 | 106 | 9.74e-17 | 75.9 |
MS.gene79326.t1 | AT1G19210 | 33.333 | 156 | 88 | 2 | 64 | 219 | 12 | 151 | 2.05e-16 | 74.7 |
MS.gene79326.t1 | AT5G65130 | 37.692 | 130 | 67 | 4 | 4 | 121 | 41 | 168 | 2.31e-16 | 76.3 |
MS.gene79326.t1 | AT5G65130 | 37.692 | 130 | 67 | 4 | 4 | 121 | 43 | 170 | 2.34e-16 | 76.3 |
MS.gene79326.t1 | AT4G06746 | 51.613 | 62 | 30 | 0 | 64 | 125 | 36 | 97 | 6.72e-16 | 72.4 |
MS.gene79326.t1 | AT2G22200 | 57.895 | 57 | 24 | 0 | 63 | 119 | 70 | 126 | 9.01e-16 | 74.3 |
MS.gene79326.t1 | AT3G50260 | 34.074 | 135 | 75 | 4 | 56 | 188 | 13 | 135 | 1.25e-15 | 72.0 |
MS.gene79326.t1 | AT4G36900 | 55.000 | 60 | 27 | 0 | 60 | 119 | 26 | 85 | 1.57e-15 | 72.8 |
MS.gene79326.t1 | AT1G78080 | 55.932 | 59 | 26 | 0 | 63 | 121 | 151 | 209 | 1.65e-15 | 74.7 |
MS.gene79326.t1 | AT1G71520 | 32.867 | 143 | 76 | 4 | 58 | 190 | 8 | 140 | 1.69e-15 | 71.2 |
MS.gene79326.t1 | AT2G23340 | 57.143 | 56 | 24 | 0 | 64 | 119 | 28 | 83 | 2.60e-15 | 71.6 |
MS.gene79326.t1 | AT5G67190 | 55.357 | 56 | 25 | 0 | 64 | 119 | 21 | 76 | 2.69e-15 | 71.6 |
MS.gene79326.t1 | AT3G11020 | 53.030 | 66 | 31 | 0 | 58 | 123 | 72 | 137 | 3.34e-15 | 73.6 |
MS.gene79326.t1 | AT2G20880 | 46.250 | 80 | 41 | 1 | 40 | 119 | 165 | 242 | 3.41e-15 | 73.6 |
MS.gene79326.t1 | AT1G36060 | 57.895 | 57 | 24 | 0 | 63 | 119 | 142 | 198 | 4.89e-15 | 73.2 |
MS.gene79326.t1 | AT2G33710 | 54.098 | 61 | 28 | 0 | 59 | 119 | 65 | 125 | 6.82e-15 | 71.6 |
MS.gene79326.t1 | AT2G33710 | 46.250 | 80 | 38 | 1 | 59 | 133 | 65 | 144 | 7.82e-15 | 71.2 |
MS.gene79326.t1 | AT5G05410 | 57.143 | 56 | 24 | 0 | 64 | 119 | 79 | 134 | 9.01e-15 | 72.4 |
MS.gene79326.t1 | AT5G05410 | 57.143 | 56 | 24 | 0 | 64 | 119 | 79 | 134 | 1.14e-14 | 72.4 |
MS.gene79326.t1 | AT3G61630 | 33.571 | 140 | 83 | 2 | 64 | 193 | 105 | 244 | 1.17e-14 | 72.0 |
MS.gene79326.t1 | AT4G28140 | 52.542 | 59 | 28 | 0 | 63 | 121 | 142 | 200 | 1.20e-14 | 71.6 |
MS.gene79326.t1 | AT5G07580 | 39.370 | 127 | 69 | 4 | 15 | 135 | 58 | 182 | 2.67e-14 | 69.3 |
MS.gene79326.t1 | AT5G13330 | 49.315 | 73 | 32 | 2 | 60 | 132 | 37 | 104 | 2.81e-14 | 69.7 |
MS.gene79326.t1 | AT3G15210 | 55.556 | 63 | 25 | 1 | 57 | 119 | 21 | 80 | 4.13e-14 | 69.3 |
MS.gene79326.t1 | AT3G57600 | 55.357 | 56 | 25 | 0 | 64 | 119 | 28 | 83 | 5.71e-14 | 69.7 |
MS.gene79326.t1 | AT1G22810 | 39.785 | 93 | 41 | 2 | 64 | 148 | 14 | 99 | 6.83e-14 | 67.0 |
MS.gene79326.t1 | AT5G61890 | 53.333 | 60 | 26 | 1 | 60 | 119 | 88 | 145 | 7.47e-14 | 68.9 |
MS.gene79326.t1 | AT1G72360 | 42.105 | 76 | 44 | 0 | 44 | 119 | 54 | 129 | 1.09e-13 | 68.6 |
MS.gene79326.t1 | AT5G61600 | 57.377 | 61 | 23 | 2 | 60 | 119 | 86 | 144 | 1.24e-13 | 68.2 |
MS.gene79326.t1 | AT5G44210 | 55.357 | 56 | 25 | 0 | 64 | 119 | 33 | 88 | 1.30e-13 | 67.4 |
MS.gene79326.t1 | AT1G03800 | 40.426 | 94 | 50 | 2 | 29 | 119 | 18 | 108 | 1.57e-13 | 68.2 |
MS.gene79326.t1 | AT1G15360 | 55.357 | 56 | 25 | 0 | 64 | 119 | 7 | 62 | 1.84e-13 | 67.0 |
MS.gene79326.t1 | AT1G15360 | 55.357 | 56 | 25 | 0 | 64 | 119 | 7 | 62 | 1.84e-13 | 67.0 |
MS.gene79326.t1 | AT5G47230 | 32.680 | 153 | 91 | 6 | 57 | 204 | 151 | 296 | 2.06e-13 | 68.6 |
MS.gene79326.t1 | AT1G72360 | 46.032 | 63 | 34 | 0 | 57 | 119 | 18 | 80 | 2.35e-13 | 67.0 |
MS.gene79326.t1 | AT5G64750 | 47.143 | 70 | 36 | 1 | 74 | 143 | 195 | 263 | 2.59e-13 | 68.6 |
MS.gene79326.t1 | AT4G31060 | 30.061 | 163 | 102 | 4 | 54 | 213 | 22 | 175 | 2.92e-13 | 66.2 |
MS.gene79326.t1 | AT5G51190 | 53.968 | 63 | 26 | 2 | 58 | 119 | 68 | 128 | 3.03e-13 | 67.0 |
MS.gene79326.t1 | AT4G11140 | 38.710 | 93 | 44 | 2 | 64 | 149 | 87 | 173 | 4.27e-13 | 67.4 |
MS.gene79326.t1 | AT4G27950 | 52.632 | 57 | 27 | 0 | 64 | 120 | 118 | 174 | 4.41e-13 | 67.8 |
MS.gene79326.t1 | AT1G72360 | 46.032 | 63 | 34 | 0 | 57 | 119 | 69 | 131 | 5.73e-13 | 66.6 |
MS.gene79326.t1 | AT5G43410 | 51.667 | 60 | 28 | 1 | 61 | 119 | 12 | 71 | 5.98e-13 | 64.3 |
MS.gene79326.t1 | AT1G75490 | 45.833 | 72 | 39 | 0 | 63 | 134 | 41 | 112 | 6.74e-13 | 65.5 |
MS.gene79326.t1 | AT5G19790 | 46.154 | 78 | 38 | 2 | 45 | 121 | 5 | 79 | 7.75e-13 | 66.2 |
MS.gene79326.t1 | AT5G25390 | 51.786 | 56 | 27 | 0 | 64 | 119 | 7 | 62 | 1.44e-12 | 64.3 |
MS.gene79326.t1 | AT3G23230 | 52.632 | 57 | 26 | 1 | 64 | 119 | 20 | 76 | 1.69e-12 | 63.2 |
MS.gene79326.t1 | AT5G25190 | 55.357 | 56 | 25 | 0 | 64 | 119 | 8 | 63 | 3.88e-12 | 63.2 |
MS.gene79326.t1 | AT5G53290 | 50.877 | 57 | 28 | 0 | 64 | 120 | 125 | 181 | 3.97e-12 | 65.1 |
MS.gene79326.t1 | AT3G20310 | 50.000 | 62 | 31 | 0 | 58 | 119 | 21 | 82 | 4.02e-12 | 63.9 |
MS.gene79326.t1 | AT5G18450 | 51.724 | 58 | 28 | 0 | 63 | 120 | 33 | 90 | 4.11e-12 | 64.7 |
MS.gene79326.t1 | AT1G28360 | 55.357 | 56 | 25 | 0 | 64 | 119 | 12 | 67 | 5.21e-12 | 62.8 |
MS.gene79326.t1 | AT1G77640 | 48.889 | 90 | 40 | 2 | 64 | 147 | 43 | 132 | 7.49e-12 | 63.2 |
MS.gene79326.t1 | AT1G28370 | 51.786 | 56 | 27 | 0 | 64 | 119 | 20 | 75 | 1.02e-11 | 61.6 |
MS.gene79326.t1 | AT4G17490 | 51.562 | 64 | 28 | 2 | 57 | 119 | 132 | 193 | 1.22e-11 | 63.2 |
MS.gene79326.t1 | AT2G40350 | 45.833 | 72 | 32 | 1 | 64 | 135 | 74 | 138 | 1.33e-11 | 61.2 |
MS.gene79326.t1 | AT4G23750 | 49.123 | 57 | 29 | 0 | 64 | 120 | 122 | 178 | 1.40e-11 | 63.5 |
MS.gene79326.t1 | AT4G23750 | 49.123 | 57 | 29 | 0 | 64 | 120 | 122 | 178 | 1.40e-11 | 63.5 |
MS.gene79326.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 64 | 119 | 14 | 69 | 1.58e-11 | 62.8 |
MS.gene79326.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 64 | 119 | 14 | 69 | 1.58e-11 | 62.8 |
MS.gene79326.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 64 | 119 | 14 | 69 | 1.58e-11 | 62.8 |
MS.gene79326.t1 | AT2G40350 | 45.833 | 72 | 32 | 1 | 64 | 135 | 67 | 131 | 1.67e-11 | 60.8 |
MS.gene79326.t1 | AT5G61590 | 47.253 | 91 | 45 | 2 | 46 | 135 | 91 | 179 | 1.71e-11 | 61.6 |
MS.gene79326.t1 | AT1G28370 | 51.786 | 56 | 27 | 0 | 64 | 119 | 58 | 113 | 1.72e-11 | 61.6 |
MS.gene79326.t1 | AT1G50640 | 52.381 | 63 | 27 | 1 | 57 | 119 | 24 | 83 | 2.06e-11 | 62.0 |
MS.gene79326.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 64 | 119 | 72 | 127 | 2.26e-11 | 62.4 |
MS.gene79326.t1 | AT5G47220 | 52.632 | 57 | 26 | 1 | 64 | 119 | 117 | 173 | 2.47e-11 | 62.0 |
MS.gene79326.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 64 | 119 | 72 | 127 | 2.92e-11 | 62.4 |
MS.gene79326.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 64 | 119 | 79 | 134 | 3.35e-11 | 62.4 |
MS.gene79326.t1 | AT1G12890 | 41.026 | 78 | 43 | 1 | 42 | 119 | 2 | 76 | 5.44e-11 | 60.5 |
MS.gene79326.t1 | AT2G46310 | 48.214 | 56 | 29 | 0 | 64 | 119 | 99 | 154 | 6.94e-11 | 61.2 |
MS.gene79326.t1 | AT5G07310 | 51.562 | 64 | 29 | 1 | 60 | 123 | 90 | 151 | 8.52e-11 | 60.5 |
Find 74 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACAGGCCGCAGAGGCTTTC+AGG | 0.128293 | 6.3:+55927835 | MS.gene79326:CDS |
ATGTTGCTTCAATGGCATTA+AGG | 0.227810 | 6.3:+55927721 | MS.gene79326:CDS |
TTTCTACCTGCACGCTTCTT+TGG | 0.248008 | 6.3:-55927549 | None:intergenic |
AATGAACTCTCGGAGGAATT+TGG | 0.252896 | 6.3:-55927459 | None:intergenic |
CAAATCTTAGTCTTCTTGTT+TGG | 0.292823 | 6.3:-55927654 | None:intergenic |
GCCAGAGTTGTTGAGGAATA+TGG | 0.301561 | 6.3:+55927962 | MS.gene79326:CDS |
ACCTCTTCATCTTGAAAATC+TGG | 0.311282 | 6.3:-55928050 | None:intergenic |
GCCTGAGTGGTGGCAGGTAT+AGG | 0.319307 | 6.3:-55927789 | None:intergenic |
CTCGGAGGAATTTGGAGAAA+TGG | 0.345355 | 6.3:-55927451 | None:intergenic |
CCTGAGTGGTGGCAGGTATA+GGG | 0.356312 | 6.3:-55927788 | None:intergenic |
TCGGAGGAATTTGGAGAAAT+GGG | 0.374883 | 6.3:-55927450 | None:intergenic |
AGACTCGCCACCCGGTATAC+AGG | 0.404494 | 6.3:+55927583 | MS.gene79326:CDS |
TGTTGCTTCAATGGCATTAA+GGG | 0.407611 | 6.3:+55927722 | MS.gene79326:CDS |
AACAGCAGAGATGGCAGCCC+GGG | 0.422465 | 6.3:+55927692 | MS.gene79326:CDS |
CAAACAAGAAGACTAAGATT+TGG | 0.423028 | 6.3:+55927655 | MS.gene79326:CDS |
CGGGCTGCCATCTCTGCTGT+TGG | 0.428361 | 6.3:-55927690 | None:intergenic |
TTCCTCACACCCCTGTATAC+CGG | 0.428874 | 6.3:-55927594 | None:intergenic |
ATGTCTCCTACACATAGCTT+TGG | 0.439535 | 6.3:+55927990 | MS.gene79326:CDS |
GGCACATGATGTTGCTTCAA+TGG | 0.452514 | 6.3:+55927713 | MS.gene79326:CDS |
TGTCTCCTACACATAGCTTT+GGG | 0.457669 | 6.3:+55927991 | MS.gene79326:CDS |
GGAAGAGGAACATAGACAAA+TGG | 0.472354 | 6.3:+55927613 | MS.gene79326:CDS |
GGAGCAGAGTAGGACTTGTA+TGG | 0.472667 | 6.3:+55927911 | MS.gene79326:CDS |
TTAGTCATTGAAGTCTTGTC+CGG | 0.492787 | 6.3:-55927858 | None:intergenic |
TGTGGATAGGAAGAGTTGTT+AGG | 0.493490 | 6.3:-55927426 | None:intergenic |
TTGAAGCAACATCATGTGCC+CGG | 0.494126 | 6.3:-55927710 | None:intergenic |
TCCTCACACCCCTGTATACC+GGG | 0.496269 | 6.3:-55927593 | None:intergenic |
AGCGGCTGCACAGGCCGCAG+AGG | 0.499896 | 6.3:+55927827 | MS.gene79326:CDS |
GGCCGCAGAGGCTTTCAGGC+CGG | 0.500487 | 6.3:+55927839 | MS.gene79326:CDS |
TATACAGGGGTGTGAGGAAG+AGG | 0.502437 | 6.3:+55927598 | MS.gene79326:CDS |
CAACAGCAGAGATGGCAGCC+CGG | 0.504594 | 6.3:+55927691 | MS.gene79326:CDS |
TGGAGAAATGGGGTGTGGAT+AGG | 0.507088 | 6.3:-55927439 | None:intergenic |
AAGATGAAGAGGTATCACTA+TGG | 0.512792 | 6.3:+55928060 | MS.gene79326:CDS |
GAGTAGGACTTGTATGGAAG+AGG | 0.516467 | 6.3:+55927917 | MS.gene79326:CDS |
GCCATATTCCTCAACAACTC+TGG | 0.516505 | 6.3:-55927963 | None:intergenic |
GAAGAGGAACATAGACAAAT+GGG | 0.527875 | 6.3:+55927614 | MS.gene79326:CDS |
GACTCGCCACCCGGTATACA+GGG | 0.529452 | 6.3:+55927584 | MS.gene79326:CDS |
GCGAATTCAGAGGGTTCTCA+AGG | 0.530969 | 6.3:+55927483 | MS.gene79326:CDS |
TGAATTCGCAAATGAACTCT+CGG | 0.538349 | 6.3:-55927469 | None:intergenic |
GGAGTCTGCAAAGTTGAGAC+AGG | 0.548191 | 6.3:-55927754 | None:intergenic |
TTGTATGGAAGAGGAAGAAG+AGG | 0.552825 | 6.3:+55927926 | MS.gene79326:CDS |
AGTTCATTTGCGAATTCAGA+GGG | 0.558084 | 6.3:+55927474 | MS.gene79326:CDS |
GTTCAAGGAGACTCGCCACC+CGG | 0.558195 | 6.3:+55927575 | MS.gene79326:CDS |
CCCTATACCTGCCACCACTC+AGG | 0.559517 | 6.3:+55927788 | MS.gene79326:CDS |
CCACTACGGAGGAGCAGAGT+AGG | 0.568284 | 6.3:+55927901 | MS.gene79326:CDS |
GAATTTGGAGAAATGGGGTG+TGG | 0.572692 | 6.3:-55927444 | None:intergenic |
TGCAGGTAGAAAGAAGTTCA+AGG | 0.572936 | 6.3:+55927560 | MS.gene79326:CDS |
CAAATGGGTGTGTGAAATGA+GGG | 0.573881 | 6.3:+55927629 | MS.gene79326:CDS |
TGAAGCAACATCATGTGCCC+GGG | 0.576327 | 6.3:-55927709 | None:intergenic |
AAGAAGACTAAGATTTGGCT+AGG | 0.578791 | 6.3:+55927660 | MS.gene79326:CDS |
ACGACTCCAAAGAAGCGTGC+AGG | 0.582103 | 6.3:+55927543 | MS.gene79326:CDS |
ACAAATGGGTGTGTGAAATG+AGG | 0.584388 | 6.3:+55927628 | MS.gene79326:CDS |
AGCTAACCTCACATCCTCGT+TGG | 0.585044 | 6.3:-55927517 | None:intergenic |
CGAATTCAGAGGGTTCTCAA+GGG | 0.590953 | 6.3:+55927484 | MS.gene79326:CDS |
GAGTTCATTTGCGAATTCAG+AGG | 0.592725 | 6.3:+55927473 | MS.gene79326:CDS |
TGAACATGCCAGAGTTGTTG+AGG | 0.595940 | 6.3:+55927955 | MS.gene79326:CDS |
TGATACCCAAAGCTATGTGT+AGG | 0.600852 | 6.3:-55927996 | None:intergenic |
TGACACGGCTATTGCCACTA+CGG | 0.604979 | 6.3:+55927887 | MS.gene79326:CDS |
GTTGCTTCAATGGCATTAAG+GGG | 0.609844 | 6.3:+55927723 | MS.gene79326:CDS |
CAATTTCCAACGAGGATGTG+AGG | 0.611045 | 6.3:+55927511 | MS.gene79326:CDS |
ACCCGGTATACAGGGGTGTG+AGG | 0.624934 | 6.3:+55927592 | MS.gene79326:CDS |
CCTACTCTGCTCCTCCGTAG+TGG | 0.628033 | 6.3:-55927901 | None:intergenic |
CGGAGGAATTTGGAGAAATG+GGG | 0.628091 | 6.3:-55927449 | None:intergenic |
TGTATGGAAGAGGAAGAAGA+GGG | 0.637572 | 6.3:+55927927 | MS.gene79326:CDS |
TATGGAAGAGGAAGAAGAGG+GGG | 0.662829 | 6.3:+55927929 | MS.gene79326:CDS |
TCAACTTTGCAGACTCCGCG+TGG | 0.671197 | 6.3:+55927760 | MS.gene79326:CDS |
GTCCGGCCTGAAAGCCTCTG+CGG | 0.672100 | 6.3:-55927841 | None:intergenic |
CACGGCTATTGCCACTACGG+AGG | 0.684552 | 6.3:+55927890 | MS.gene79326:CDS |
ACTCGCCACCCGGTATACAG+GGG | 0.698870 | 6.3:+55927585 | MS.gene79326:CDS |
AATGACTAATGATATTGACA+CGG | 0.707724 | 6.3:+55927872 | MS.gene79326:CDS |
ATTCGCAAATGAACTCTCGG+AGG | 0.727426 | 6.3:-55927466 | None:intergenic |
TCACACCCCTGTATACCGGG+TGG | 0.728872 | 6.3:-55927590 | None:intergenic |
GTATGGAAGAGGAAGAAGAG+GGG | 0.730904 | 6.3:+55927928 | MS.gene79326:CDS |
AGGTATAGGGAGTCGCCACG+CGG | 0.731956 | 6.3:-55927775 | None:intergenic |
AGGGATGTCAATTTCCAACG+AGG | 0.794906 | 6.3:+55927503 | MS.gene79326:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AATGACTAATGATATTGACA+CGG | + | chr6.3:55927872-55927891 | MS.gene79326:CDS | 25.0% |
CAAACAAGAAGACTAAGATT+TGG | + | chr6.3:55927655-55927674 | MS.gene79326:CDS | 30.0% | |
GGCAAAAGATATACAAAAAG+CGG | + | chr6.3:55927809-55927828 | MS.gene79326:CDS | 30.0% | |
! | CAAATCTTAGTCTTCTTGTT+TGG | - | chr6.3:55927657-55927676 | None:intergenic | 30.0% |
AAGAAGACTAAGATTTGGCT+AGG | + | chr6.3:55927660-55927679 | MS.gene79326:CDS | 35.0% | |
ACCTCTTCATCTTGAAAATC+TGG | - | chr6.3:55928053-55928072 | None:intergenic | 35.0% | |
AGTTCATTTGCGAATTCAGA+GGG | + | chr6.3:55927474-55927493 | MS.gene79326:CDS | 35.0% | |
GAAGAGGAACATAGACAAAT+GGG | + | chr6.3:55927614-55927633 | MS.gene79326:CDS | 35.0% | |
TGAATTCGCAAATGAACTCT+CGG | - | chr6.3:55927472-55927491 | None:intergenic | 35.0% | |
! | ATGTTGCTTCAATGGCATTA+AGG | + | chr6.3:55927721-55927740 | MS.gene79326:CDS | 35.0% |
! | TGTTGCTTCAATGGCATTAA+GGG | + | chr6.3:55927722-55927741 | MS.gene79326:CDS | 35.0% |
! | TTAGTCATTGAAGTCTTGTC+CGG | - | chr6.3:55927861-55927880 | None:intergenic | 35.0% |
! | TTGTATATCTTTTGCCTGAG+TGG | - | chr6.3:55927805-55927824 | None:intergenic | 35.0% |
!! | AAGATGAAGAGGTATCACTA+TGG | + | chr6.3:55928060-55928079 | MS.gene79326:CDS | 35.0% |
!! | TCCAGATTTTCAAGATGAAG+AGG | + | chr6.3:55928049-55928068 | MS.gene79326:CDS | 35.0% |
AATGAACTCTCGGAGGAATT+TGG | - | chr6.3:55927462-55927481 | None:intergenic | 40.0% | |
ACAAATGGGTGTGTGAAATG+AGG | + | chr6.3:55927628-55927647 | MS.gene79326:CDS | 40.0% | |
ATGTCTCCTACACATAGCTT+TGG | + | chr6.3:55927990-55928009 | MS.gene79326:CDS | 40.0% | |
CAAATGGGTGTGTGAAATGA+GGG | + | chr6.3:55927629-55927648 | MS.gene79326:CDS | 40.0% | |
GAGTTCATTTGCGAATTCAG+AGG | + | chr6.3:55927473-55927492 | MS.gene79326:CDS | 40.0% | |
GGAAGAGGAACATAGACAAA+TGG | + | chr6.3:55927613-55927632 | MS.gene79326:CDS | 40.0% | |
GTTGCTTCAATGGCATTAAG+GGG | + | chr6.3:55927723-55927742 | MS.gene79326:CDS | 40.0% | |
TCGGAGGAATTTGGAGAAAT+GGG | - | chr6.3:55927453-55927472 | None:intergenic | 40.0% | |
TGATACCCAAAGCTATGTGT+AGG | - | chr6.3:55927999-55928018 | None:intergenic | 40.0% | |
TGCAGGTAGAAAGAAGTTCA+AGG | + | chr6.3:55927560-55927579 | MS.gene79326:CDS | 40.0% | |
TGTATGGAAGAGGAAGAAGA+GGG | + | chr6.3:55927927-55927946 | MS.gene79326:CDS | 40.0% | |
TGTCTCCTACACATAGCTTT+GGG | + | chr6.3:55927991-55928010 | MS.gene79326:CDS | 40.0% | |
TGTGGATAGGAAGAGTTGTT+AGG | - | chr6.3:55927429-55927448 | None:intergenic | 40.0% | |
TTGTATGGAAGAGGAAGAAG+AGG | + | chr6.3:55927926-55927945 | MS.gene79326:CDS | 40.0% | |
! | TATATCTTTTGCCTGAGTGG+TGG | - | chr6.3:55927802-55927821 | None:intergenic | 40.0% |
AGGGATGTCAATTTCCAACG+AGG | + | chr6.3:55927503-55927522 | MS.gene79326:CDS | 45.0% | |
ATTCGCAAATGAACTCTCGG+AGG | - | chr6.3:55927469-55927488 | None:intergenic | 45.0% | |
CAATTTCCAACGAGGATGTG+AGG | + | chr6.3:55927511-55927530 | MS.gene79326:CDS | 45.0% | |
CGAATTCAGAGGGTTCTCAA+GGG | + | chr6.3:55927484-55927503 | MS.gene79326:CDS | 45.0% | |
CGGAGGAATTTGGAGAAATG+GGG | - | chr6.3:55927452-55927471 | None:intergenic | 45.0% | |
CTCGGAGGAATTTGGAGAAA+TGG | - | chr6.3:55927454-55927473 | None:intergenic | 45.0% | |
GAATTTGGAGAAATGGGGTG+TGG | - | chr6.3:55927447-55927466 | None:intergenic | 45.0% | |
GAGTAGGACTTGTATGGAAG+AGG | + | chr6.3:55927917-55927936 | MS.gene79326:CDS | 45.0% | |
GCCAGAGTTGTTGAGGAATA+TGG | + | chr6.3:55927962-55927981 | MS.gene79326:CDS | 45.0% | |
GCCATATTCCTCAACAACTC+TGG | - | chr6.3:55927966-55927985 | None:intergenic | 45.0% | |
GTATGGAAGAGGAAGAAGAG+GGG | + | chr6.3:55927928-55927947 | MS.gene79326:CDS | 45.0% | |
TATACAAAAAGCGGCTGCAC+AGG | + | chr6.3:55927818-55927837 | MS.gene79326:CDS | 45.0% | |
TATGGAAGAGGAAGAAGAGG+GGG | + | chr6.3:55927929-55927948 | MS.gene79326:CDS | 45.0% | |
TGAACATGCCAGAGTTGTTG+AGG | + | chr6.3:55927955-55927974 | MS.gene79326:CDS | 45.0% | |
TTGAAGCAACATCATGTGCC+CGG | - | chr6.3:55927713-55927732 | None:intergenic | 45.0% | |
TTTCTACCTGCACGCTTCTT+TGG | - | chr6.3:55927552-55927571 | None:intergenic | 45.0% | |
! | CACTTTTCCAACAGCAGAGA+TGG | + | chr6.3:55927683-55927702 | MS.gene79326:CDS | 45.0% |
! | GGCACATGATGTTGCTTCAA+TGG | + | chr6.3:55927713-55927732 | MS.gene79326:CDS | 45.0% |
AGCTAACCTCACATCCTCGT+TGG | - | chr6.3:55927520-55927539 | None:intergenic | 50.0% | |
GCGAATTCAGAGGGTTCTCA+AGG | + | chr6.3:55927483-55927502 | MS.gene79326:CDS | 50.0% | |
GGAGCAGAGTAGGACTTGTA+TGG | + | chr6.3:55927911-55927930 | MS.gene79326:CDS | 50.0% | |
GGAGTCTGCAAAGTTGAGAC+AGG | - | chr6.3:55927757-55927776 | None:intergenic | 50.0% | |
TGAAGCAACATCATGTGCCC+GGG | - | chr6.3:55927712-55927731 | None:intergenic | 50.0% | |
TGACACGGCTATTGCCACTA+CGG | + | chr6.3:55927887-55927906 | MS.gene79326:CDS | 50.0% | |
TGGAGAAATGGGGTGTGGAT+AGG | - | chr6.3:55927442-55927461 | None:intergenic | 50.0% | |
TTCCTCACACCCCTGTATAC+CGG | - | chr6.3:55927597-55927616 | None:intergenic | 50.0% | |
! | TATACAGGGGTGTGAGGAAG+AGG | + | chr6.3:55927598-55927617 | MS.gene79326:CDS | 50.0% |
CCTGAGTGGTGGCAGGTATA+GGG | - | chr6.3:55927791-55927810 | None:intergenic | 55.0% | |
TCAACTTTGCAGACTCCGCG+TGG | + | chr6.3:55927760-55927779 | MS.gene79326:CDS | 55.0% | |
TCCTCACACCCCTGTATACC+GGG | - | chr6.3:55927596-55927615 | None:intergenic | 55.0% | |
! | ACGACTCCAAAGAAGCGTGC+AGG | + | chr6.3:55927543-55927562 | MS.gene79326:CDS | 55.0% |
! | TCTTTTGCCTGAGTGGTGGC+AGG | - | chr6.3:55927798-55927817 | None:intergenic | 55.0% |
AACAGCAGAGATGGCAGCCC+GGG | + | chr6.3:55927692-55927711 | MS.gene79326:CDS | 60.0% | |
ACTCGCCACCCGGTATACAG+GGG | + | chr6.3:55927585-55927604 | MS.gene79326:CDS | 60.0% | |
AGACTCGCCACCCGGTATAC+AGG | + | chr6.3:55927583-55927602 | MS.gene79326:CDS | 60.0% | |
AGGTATAGGGAGTCGCCACG+CGG | - | chr6.3:55927778-55927797 | None:intergenic | 60.0% | |
CAACAGCAGAGATGGCAGCC+CGG | + | chr6.3:55927691-55927710 | MS.gene79326:CDS | 60.0% | |
CACGGCTATTGCCACTACGG+AGG | + | chr6.3:55927890-55927909 | MS.gene79326:CDS | 60.0% | |
CCACTACGGAGGAGCAGAGT+AGG | + | chr6.3:55927901-55927920 | MS.gene79326:CDS | 60.0% | |
CCCTATACCTGCCACCACTC+AGG | + | chr6.3:55927788-55927807 | MS.gene79326:CDS | 60.0% | |
CCTACTCTGCTCCTCCGTAG+TGG | - | chr6.3:55927904-55927923 | None:intergenic | 60.0% | |
GACTCGCCACCCGGTATACA+GGG | + | chr6.3:55927584-55927603 | MS.gene79326:CDS | 60.0% | |
GCCTGAGTGGTGGCAGGTAT+AGG | - | chr6.3:55927792-55927811 | None:intergenic | 60.0% | |
GTTCAAGGAGACTCGCCACC+CGG | + | chr6.3:55927575-55927594 | MS.gene79326:CDS | 60.0% | |
TCACACCCCTGTATACCGGG+TGG | - | chr6.3:55927593-55927612 | None:intergenic | 60.0% | |
! | ACCCGGTATACAGGGGTGTG+AGG | + | chr6.3:55927592-55927611 | MS.gene79326:CDS | 60.0% |
CACAGGCCGCAGAGGCTTTC+AGG | + | chr6.3:55927835-55927854 | MS.gene79326:CDS | 65.0% | |
CGGGCTGCCATCTCTGCTGT+TGG | - | chr6.3:55927693-55927712 | None:intergenic | 65.0% | |
GTCCGGCCTGAAAGCCTCTG+CGG | - | chr6.3:55927844-55927863 | None:intergenic | 65.0% | |
GGCCGCAGAGGCTTTCAGGC+CGG | + | chr6.3:55927839-55927858 | MS.gene79326:CDS | 70.0% | |
AGCGGCTGCACAGGCCGCAG+AGG | + | chr6.3:55927827-55927846 | MS.gene79326:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 55927411 | 55928091 | 55927411 | ID=MS.gene79326 |
chr6.3 | mRNA | 55927411 | 55928091 | 55927411 | ID=MS.gene79326.t1;Parent=MS.gene79326 |
chr6.3 | exon | 55927411 | 55928091 | 55927411 | ID=MS.gene79326.t1.exon1;Parent=MS.gene79326.t1 |
chr6.3 | CDS | 55927411 | 55928091 | 55927411 | ID=cds.MS.gene79326.t1;Parent=MS.gene79326.t1 |
Gene Sequence |
Protein sequence |