Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86601.t1 | KEH26600.1 | 87.9 | 257 | 28 | 1 | 1 | 254 | 1 | 257 | 1.10E-116 | 429.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86601.t1 | Q9M0L0 | 57.2 | 180 | 70 | 2 | 41 | 213 | 29 | 208 | 6.6e-46 | 185.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86601.t1 | A0A072UL81 | 87.9 | 257 | 28 | 1 | 1 | 254 | 1 | 257 | 7.9e-117 | 429.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene86601.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86601.t1 | MTR_6g465690 | 89.494 | 257 | 24 | 1 | 1 | 254 | 1 | 257 | 9.44e-168 | 464 |
MS.gene86601.t1 | MTR_6g466000 | 75.943 | 212 | 37 | 2 | 23 | 224 | 17 | 224 | 7.77e-112 | 321 |
MS.gene86601.t1 | MTR_6g465450 | 70.320 | 219 | 56 | 3 | 3 | 219 | 1 | 212 | 1.59e-102 | 298 |
MS.gene86601.t1 | MTR_6g465420 | 66.210 | 219 | 64 | 3 | 3 | 219 | 1 | 211 | 1.26e-98 | 289 |
MS.gene86601.t1 | MTR_6g465460 | 66.972 | 218 | 63 | 3 | 3 | 219 | 1 | 210 | 1.04e-97 | 287 |
MS.gene86601.t1 | MTR_6g465430 | 73.514 | 185 | 48 | 1 | 36 | 219 | 27 | 211 | 8.44e-97 | 283 |
MS.gene86601.t1 | MTR_6g466130 | 73.399 | 203 | 48 | 3 | 22 | 222 | 25 | 223 | 1.21e-93 | 275 |
MS.gene86601.t1 | MTR_6g465510 | 69.951 | 203 | 42 | 3 | 35 | 222 | 5 | 203 | 4.46e-86 | 255 |
MS.gene86601.t1 | MTR_6g465530 | 69.072 | 194 | 49 | 3 | 35 | 222 | 5 | 193 | 2.12e-84 | 250 |
MS.gene86601.t1 | MTR_6g465990 | 64.455 | 211 | 41 | 3 | 22 | 222 | 2 | 188 | 3.32e-81 | 242 |
MS.gene86601.t1 | MTR_1g101600 | 65.882 | 170 | 58 | 0 | 35 | 204 | 13 | 182 | 9.23e-71 | 216 |
MS.gene86601.t1 | MTR_6g465850 | 52.878 | 278 | 69 | 6 | 3 | 222 | 1 | 274 | 5.36e-67 | 209 |
MS.gene86601.t1 | MTR_6g466020 | 55.224 | 201 | 66 | 4 | 22 | 222 | 2 | 178 | 3.85e-63 | 196 |
MS.gene86601.t1 | MTR_5g010930 | 47.959 | 196 | 82 | 5 | 38 | 215 | 24 | 217 | 2.38e-51 | 167 |
MS.gene86601.t1 | MTR_5g010940 | 60.150 | 133 | 47 | 1 | 21 | 147 | 12 | 144 | 7.93e-50 | 163 |
MS.gene86601.t1 | MTR_4g102660 | 52.062 | 194 | 75 | 8 | 35 | 212 | 16 | 207 | 6.40e-47 | 155 |
MS.gene86601.t1 | MTR_5g010910 | 59.701 | 134 | 47 | 2 | 21 | 147 | 6 | 139 | 1.08e-46 | 155 |
MS.gene86601.t1 | MTR_3g110205 | 62.069 | 87 | 33 | 0 | 58 | 144 | 38 | 124 | 4.79e-34 | 121 |
MS.gene86601.t1 | MTR_8g006410 | 67.949 | 78 | 25 | 0 | 60 | 137 | 49 | 126 | 3.99e-33 | 120 |
MS.gene86601.t1 | MTR_7g046260 | 65.432 | 81 | 28 | 0 | 57 | 137 | 55 | 135 | 8.56e-33 | 119 |
MS.gene86601.t1 | MTR_5g012910 | 63.291 | 79 | 29 | 0 | 59 | 137 | 24 | 102 | 2.60e-31 | 114 |
MS.gene86601.t1 | MTR_7g117690 | 63.750 | 80 | 29 | 0 | 58 | 137 | 23 | 102 | 3.04e-30 | 111 |
MS.gene86601.t1 | MTR_8g013860 | 54.639 | 97 | 43 | 1 | 42 | 137 | 25 | 121 | 4.68e-30 | 112 |
MS.gene86601.t1 | MTR_2g085015 | 60.000 | 90 | 34 | 2 | 57 | 144 | 41 | 130 | 5.35e-30 | 112 |
MS.gene86601.t1 | MTR_2g101340 | 53.465 | 101 | 41 | 2 | 43 | 137 | 15 | 115 | 5.90e-30 | 111 |
MS.gene86601.t1 | MTR_8g102800 | 55.556 | 99 | 44 | 0 | 53 | 151 | 27 | 125 | 1.29e-29 | 111 |
MS.gene86601.t1 | MTR_6g088405 | 60.256 | 78 | 31 | 0 | 60 | 137 | 41 | 118 | 1.70e-28 | 108 |
MS.gene86601.t1 | MTR_8g027465 | 53.000 | 100 | 41 | 2 | 41 | 137 | 20 | 116 | 5.87e-27 | 103 |
MS.gene86601.t1 | MTR_4g100650 | 60.256 | 78 | 31 | 0 | 60 | 137 | 71 | 148 | 1.19e-26 | 104 |
MS.gene86601.t1 | MTR_4g102670 | 56.962 | 79 | 33 | 1 | 59 | 137 | 11 | 88 | 1.07e-24 | 97.1 |
MS.gene86601.t1 | MTR_6g088425 | 49.123 | 114 | 48 | 1 | 41 | 144 | 17 | 130 | 3.33e-24 | 97.4 |
MS.gene86601.t1 | MTR_4g035430 | 46.429 | 112 | 53 | 2 | 33 | 144 | 9 | 113 | 7.10e-24 | 96.3 |
MS.gene86601.t1 | MTR_1g006660 | 56.383 | 94 | 37 | 1 | 48 | 137 | 28 | 121 | 4.66e-23 | 94.7 |
MS.gene86601.t1 | MTR_5g008590 | 39.306 | 173 | 88 | 4 | 63 | 219 | 11 | 182 | 3.78e-21 | 88.2 |
MS.gene86601.t1 | MTR_2g435590 | 39.200 | 125 | 75 | 1 | 8 | 132 | 42 | 165 | 6.38e-18 | 80.9 |
MS.gene86601.t1 | MTR_5g008550 | 36.076 | 158 | 83 | 5 | 63 | 208 | 21 | 172 | 1.03e-17 | 79.0 |
MS.gene86601.t1 | MTR_1g014780 | 32.680 | 153 | 89 | 3 | 32 | 171 | 1 | 152 | 1.22e-17 | 79.7 |
MS.gene86601.t1 | MTR_5g083340 | 60.345 | 58 | 23 | 0 | 63 | 120 | 85 | 142 | 9.02e-17 | 79.3 |
MS.gene86601.t1 | MTR_3g102100 | 58.929 | 56 | 23 | 0 | 63 | 118 | 45 | 100 | 2.18e-16 | 75.1 |
MS.gene86601.t1 | MTR_2g105380 | 48.611 | 72 | 37 | 0 | 51 | 122 | 105 | 176 | 2.56e-16 | 77.8 |
MS.gene86601.t1 | MTR_5g008470 | 44.048 | 84 | 47 | 0 | 65 | 148 | 77 | 160 | 3.69e-16 | 74.7 |
MS.gene86601.t1 | MTR_7g021010 | 32.759 | 116 | 60 | 1 | 5 | 120 | 11 | 108 | 3.76e-16 | 74.3 |
MS.gene86601.t1 | MTR_1g060910 | 31.977 | 172 | 72 | 6 | 47 | 197 | 3 | 150 | 7.79e-16 | 73.6 |
MS.gene86601.t1 | MTR_1g090170 | 53.968 | 63 | 29 | 0 | 58 | 120 | 147 | 209 | 8.33e-16 | 75.9 |
MS.gene86601.t1 | MTR_5g062700 | 52.000 | 75 | 33 | 2 | 46 | 120 | 159 | 230 | 1.02e-15 | 76.3 |
MS.gene86601.t1 | MTR_3g074130 | 57.627 | 59 | 25 | 0 | 62 | 120 | 149 | 207 | 1.07e-15 | 75.9 |
MS.gene86601.t1 | MTR_7g020980 | 51.613 | 62 | 30 | 0 | 59 | 120 | 47 | 108 | 1.14e-15 | 73.2 |
MS.gene86601.t1 | MTR_1g090170 | 53.968 | 63 | 29 | 0 | 58 | 120 | 234 | 296 | 1.48e-15 | 75.9 |
MS.gene86601.t1 | MTR_1g087920 | 48.529 | 68 | 35 | 0 | 53 | 120 | 67 | 134 | 1.56e-15 | 75.1 |
MS.gene86601.t1 | MTR_7g021010 | 53.030 | 66 | 30 | 1 | 56 | 120 | 4 | 69 | 1.66e-15 | 71.6 |
MS.gene86601.t1 | MTR_1g014820 | 36.697 | 109 | 63 | 2 | 62 | 166 | 26 | 132 | 1.77e-15 | 74.3 |
MS.gene86601.t1 | MTR_2g090235 | 57.627 | 59 | 25 | 0 | 62 | 120 | 217 | 275 | 1.84e-15 | 75.5 |
MS.gene86601.t1 | MTR_8g090350 | 57.895 | 57 | 24 | 0 | 62 | 118 | 112 | 168 | 1.86e-15 | 74.7 |
MS.gene86601.t1 | MTR_2g043050 | 43.529 | 85 | 48 | 0 | 62 | 146 | 18 | 102 | 1.95e-15 | 73.2 |
MS.gene86601.t1 | MTR_1g014860 | 33.588 | 131 | 74 | 3 | 62 | 181 | 21 | 149 | 2.25e-15 | 73.2 |
MS.gene86601.t1 | MTR_1g019110 | 43.023 | 86 | 46 | 1 | 63 | 148 | 44 | 126 | 2.47e-15 | 72.4 |
MS.gene86601.t1 | MTR_3g105510 | 42.353 | 85 | 49 | 0 | 63 | 147 | 37 | 121 | 2.57e-15 | 73.6 |
MS.gene86601.t1 | MTR_4g086220 | 58.929 | 56 | 23 | 0 | 63 | 118 | 96 | 151 | 3.03e-15 | 73.2 |
MS.gene86601.t1 | MTR_5g083330 | 50.685 | 73 | 36 | 0 | 48 | 120 | 20 | 92 | 3.17e-15 | 73.9 |
MS.gene86601.t1 | MTR_1g028560 | 35.156 | 128 | 66 | 3 | 9 | 119 | 44 | 171 | 4.52e-15 | 73.9 |
MS.gene86601.t1 | MTR_3g053690 | 57.812 | 64 | 24 | 1 | 55 | 118 | 22 | 82 | 5.02e-15 | 72.4 |
MS.gene86601.t1 | MTR_4g086165 | 42.574 | 101 | 47 | 2 | 18 | 118 | 48 | 137 | 6.62e-15 | 71.6 |
MS.gene86601.t1 | MTR_8g092460 | 54.237 | 59 | 27 | 0 | 63 | 121 | 145 | 203 | 6.85e-15 | 73.2 |
MS.gene86601.t1 | MTR_1g014800 | 51.667 | 60 | 29 | 0 | 62 | 121 | 30 | 89 | 7.26e-15 | 71.6 |
MS.gene86601.t1 | MTR_4g086160 | 57.143 | 56 | 24 | 0 | 63 | 118 | 96 | 151 | 8.65e-15 | 72.0 |
MS.gene86601.t1 | MTR_2g089170 | 37.398 | 123 | 69 | 3 | 63 | 181 | 65 | 183 | 8.86e-15 | 70.9 |
MS.gene86601.t1 | MTR_5g082950 | 60.714 | 56 | 22 | 0 | 63 | 118 | 66 | 121 | 9.76e-15 | 73.2 |
MS.gene86601.t1 | MTR_2g078680 | 58.929 | 56 | 23 | 0 | 63 | 118 | 31 | 86 | 9.79e-15 | 71.2 |
MS.gene86601.t1 | MTR_4g086190 | 57.143 | 56 | 24 | 0 | 63 | 118 | 96 | 151 | 1.08e-14 | 71.6 |
MS.gene86601.t1 | MTR_5g016750 | 55.357 | 56 | 25 | 0 | 63 | 118 | 25 | 80 | 1.26e-14 | 70.5 |
MS.gene86601.t1 | MTR_8g022820 | 48.571 | 70 | 36 | 0 | 53 | 122 | 113 | 182 | 1.40e-14 | 72.8 |
MS.gene86601.t1 | MTR_8g022820 | 48.571 | 70 | 36 | 0 | 53 | 122 | 114 | 183 | 1.43e-14 | 72.8 |
MS.gene86601.t1 | MTR_8g022820 | 48.571 | 70 | 36 | 0 | 53 | 122 | 114 | 183 | 1.43e-14 | 72.8 |
MS.gene86601.t1 | MTR_0939s0010 | 57.143 | 56 | 24 | 0 | 63 | 118 | 65 | 120 | 3.15e-14 | 69.7 |
MS.gene86601.t1 | MTR_7g092190 | 58.929 | 56 | 23 | 0 | 63 | 118 | 30 | 85 | 3.22e-14 | 71.2 |
MS.gene86601.t1 | MTR_7g028925 | 53.333 | 60 | 25 | 1 | 62 | 121 | 28 | 84 | 3.35e-14 | 67.0 |
MS.gene86601.t1 | MTR_1g074310 | 57.895 | 57 | 23 | 1 | 63 | 118 | 21 | 77 | 3.68e-14 | 68.2 |
MS.gene86601.t1 | MTR_4g078710 | 33.621 | 116 | 69 | 2 | 63 | 178 | 28 | 135 | 4.50e-14 | 69.7 |
MS.gene86601.t1 | MTR_2g015050 | 50.725 | 69 | 33 | 1 | 51 | 118 | 122 | 190 | 4.58e-14 | 70.5 |
MS.gene86601.t1 | MTR_3g105480 | 42.169 | 83 | 48 | 0 | 65 | 147 | 33 | 115 | 5.48e-14 | 69.7 |
MS.gene86601.t1 | MTR_2g043030 | 39.326 | 89 | 54 | 0 | 62 | 150 | 18 | 106 | 5.63e-14 | 68.9 |
MS.gene86601.t1 | MTR_2g438180 | 57.627 | 59 | 24 | 1 | 63 | 120 | 14 | 72 | 7.14e-14 | 67.0 |
MS.gene86601.t1 | MTR_1g101550 | 56.000 | 75 | 32 | 1 | 63 | 137 | 57 | 130 | 9.56e-14 | 68.9 |
MS.gene86601.t1 | MTR_5g009620 | 41.304 | 92 | 48 | 1 | 33 | 118 | 76 | 167 | 9.72e-14 | 70.1 |
MS.gene86601.t1 | MTR_4g114570 | 55.357 | 56 | 25 | 0 | 63 | 118 | 7 | 62 | 1.17e-13 | 68.6 |
MS.gene86601.t1 | MTR_2g014340 | 49.296 | 71 | 33 | 1 | 48 | 118 | 7 | 74 | 1.46e-13 | 67.8 |
MS.gene86601.t1 | MTR_4g010640 | 55.357 | 56 | 25 | 0 | 63 | 118 | 7 | 62 | 2.11e-13 | 67.8 |
MS.gene86601.t1 | MTR_3g106290 | 58.929 | 56 | 23 | 0 | 63 | 118 | 8 | 63 | 2.19e-13 | 67.0 |
MS.gene86601.t1 | MTR_4g008860 | 58.929 | 56 | 23 | 0 | 63 | 118 | 8 | 63 | 2.38e-13 | 67.0 |
MS.gene86601.t1 | MTR_1g070070 | 54.386 | 57 | 25 | 1 | 63 | 118 | 21 | 77 | 3.02e-13 | 65.9 |
MS.gene86601.t1 | MTR_1g048610 | 38.462 | 104 | 61 | 2 | 16 | 118 | 44 | 145 | 3.30e-13 | 67.4 |
MS.gene86601.t1 | MTR_4g100450 | 43.373 | 83 | 46 | 1 | 37 | 118 | 128 | 210 | 3.57e-13 | 68.2 |
MS.gene86601.t1 | MTR_3g090760 | 43.750 | 80 | 36 | 1 | 39 | 118 | 98 | 168 | 4.64e-13 | 68.2 |
MS.gene86601.t1 | MTR_5g085100 | 42.708 | 96 | 46 | 2 | 23 | 118 | 15 | 101 | 5.69e-13 | 67.4 |
MS.gene86601.t1 | MTR_2g014300 | 57.143 | 56 | 24 | 0 | 63 | 118 | 15 | 70 | 5.96e-13 | 65.5 |
MS.gene86601.t1 | MTR_2g103700 | 53.571 | 56 | 26 | 0 | 63 | 118 | 7 | 62 | 6.36e-13 | 65.5 |
MS.gene86601.t1 | MTR_1g074230 | 56.140 | 57 | 24 | 1 | 63 | 118 | 19 | 75 | 8.72e-13 | 64.3 |
MS.gene86601.t1 | MTR_2g016730 | 41.111 | 90 | 47 | 2 | 52 | 140 | 11 | 95 | 9.39e-13 | 67.4 |
MS.gene86601.t1 | MTR_4g100420 | 56.140 | 57 | 24 | 1 | 63 | 118 | 157 | 213 | 1.78e-12 | 66.2 |
MS.gene86601.t1 | MTR_1g074250 | 52.459 | 61 | 27 | 1 | 60 | 118 | 16 | 76 | 1.98e-12 | 63.2 |
MS.gene86601.t1 | MTR_2g043040 | 38.824 | 85 | 52 | 0 | 62 | 146 | 18 | 102 | 2.96e-12 | 64.7 |
MS.gene86601.t1 | MTR_1g090290 | 47.945 | 73 | 34 | 3 | 58 | 128 | 110 | 180 | 3.13e-12 | 63.9 |
MS.gene86601.t1 | MTR_8g099215 | 39.785 | 93 | 50 | 1 | 32 | 118 | 70 | 162 | 6.42e-12 | 64.7 |
MS.gene86601.t1 | MTR_4g054360 | 48.485 | 66 | 33 | 1 | 56 | 120 | 117 | 182 | 6.85e-12 | 64.3 |
MS.gene86601.t1 | MTR_5g085070 | 52.381 | 63 | 27 | 1 | 56 | 118 | 47 | 106 | 8.54e-12 | 63.9 |
MS.gene86601.t1 | MTR_2g043020 | 36.559 | 93 | 59 | 0 | 62 | 154 | 18 | 110 | 8.65e-12 | 63.2 |
MS.gene86601.t1 | MTR_4g088005 | 46.377 | 69 | 36 | 1 | 51 | 118 | 45 | 113 | 9.59e-12 | 61.2 |
MS.gene86601.t1 | MTR_8g069360 | 51.786 | 56 | 27 | 0 | 63 | 118 | 44 | 99 | 9.78e-12 | 64.7 |
MS.gene86601.t1 | MTR_4g054740 | 36.893 | 103 | 55 | 3 | 19 | 120 | 62 | 155 | 1.31e-11 | 63.2 |
MS.gene86601.t1 | MTR_4g111915 | 45.763 | 59 | 32 | 0 | 63 | 121 | 53 | 111 | 1.56e-11 | 60.8 |
MS.gene86601.t1 | MTR_6g012970 | 36.538 | 104 | 54 | 2 | 30 | 133 | 13 | 104 | 1.60e-11 | 63.9 |
MS.gene86601.t1 | MTR_5g075570 | 46.667 | 60 | 32 | 0 | 59 | 118 | 120 | 179 | 1.68e-11 | 63.2 |
MS.gene86601.t1 | MTR_5g032820 | 49.275 | 69 | 33 | 1 | 63 | 131 | 46 | 112 | 2.29e-11 | 63.5 |
MS.gene86601.t1 | MTR_5g008540 | 48.214 | 56 | 29 | 0 | 65 | 120 | 26 | 81 | 4.94e-11 | 58.5 |
MS.gene86601.t1 | MTR_4g112490 | 45.763 | 59 | 32 | 0 | 63 | 121 | 53 | 111 | 5.69e-11 | 60.8 |
MS.gene86601.t1 | MTR_8g006840 | 50.877 | 57 | 27 | 1 | 63 | 118 | 125 | 181 | 5.70e-11 | 60.5 |
MS.gene86601.t1 | MTR_8g032610 | 49.123 | 57 | 29 | 0 | 63 | 119 | 27 | 83 | 6.08e-11 | 62.0 |
MS.gene86601.t1 | MTR_4g100380 | 54.386 | 57 | 25 | 1 | 63 | 118 | 145 | 201 | 6.62e-11 | 61.2 |
MS.gene86601.t1 | MTR_3g072610 | 43.956 | 91 | 43 | 3 | 63 | 147 | 25 | 113 | 7.22e-11 | 60.8 |
MS.gene86601.t1 | MTR_6g029180 | 46.479 | 71 | 37 | 1 | 48 | 118 | 19 | 88 | 7.89e-11 | 61.6 |
MS.gene86601.t1 | MTR_7g081805 | 50.877 | 57 | 27 | 1 | 63 | 118 | 61 | 117 | 8.82e-11 | 60.1 |
MS.gene86601.t1 | MTR_7g085810 | 50.000 | 56 | 28 | 0 | 63 | 118 | 30 | 85 | 9.38e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86601.t1 | AT4G25470 | 58.857 | 175 | 62 | 2 | 40 | 204 | 28 | 202 | 9.13e-63 | 196 |
MS.gene86601.t1 | AT5G51990 | 50.698 | 215 | 93 | 4 | 12 | 213 | 2 | 216 | 7.94e-61 | 191 |
MS.gene86601.t1 | AT4G25480 | 57.222 | 180 | 70 | 2 | 41 | 213 | 29 | 208 | 8.03e-59 | 186 |
MS.gene86601.t1 | AT1G63030 | 52.381 | 168 | 70 | 2 | 34 | 201 | 1 | 158 | 5.18e-56 | 177 |
MS.gene86601.t1 | AT1G63030 | 52.381 | 168 | 70 | 2 | 34 | 201 | 1 | 158 | 5.18e-56 | 177 |
MS.gene86601.t1 | AT4G25490 | 59.302 | 172 | 62 | 3 | 41 | 204 | 26 | 197 | 1.59e-55 | 177 |
MS.gene86601.t1 | AT1G12610 | 67.241 | 116 | 38 | 0 | 34 | 149 | 1 | 116 | 7.16e-55 | 176 |
MS.gene86601.t1 | AT5G25810 | 59.574 | 94 | 37 | 1 | 52 | 144 | 24 | 117 | 3.02e-34 | 123 |
MS.gene86601.t1 | AT2G44940 | 52.941 | 119 | 52 | 2 | 52 | 170 | 89 | 203 | 7.32e-33 | 121 |
MS.gene86601.t1 | AT5G11590 | 52.174 | 115 | 51 | 1 | 34 | 144 | 18 | 132 | 1.26e-32 | 119 |
MS.gene86601.t1 | AT4G32800 | 52.336 | 107 | 45 | 1 | 50 | 150 | 6 | 112 | 1.40e-32 | 119 |
MS.gene86601.t1 | AT2G35700 | 48.529 | 136 | 66 | 2 | 58 | 192 | 40 | 172 | 2.43e-31 | 115 |
MS.gene86601.t1 | AT1G01250 | 51.402 | 107 | 49 | 1 | 34 | 137 | 13 | 119 | 2.93e-29 | 109 |
MS.gene86601.t1 | AT4G16750 | 50.893 | 112 | 49 | 2 | 33 | 138 | 4 | 115 | 5.85e-29 | 108 |
MS.gene86601.t1 | AT3G16280 | 60.759 | 79 | 31 | 0 | 59 | 137 | 57 | 135 | 6.38e-29 | 109 |
MS.gene86601.t1 | AT3G16280 | 60.759 | 79 | 31 | 0 | 59 | 137 | 75 | 153 | 1.02e-28 | 109 |
MS.gene86601.t1 | AT2G25820 | 61.842 | 76 | 29 | 0 | 62 | 137 | 25 | 100 | 8.77e-27 | 103 |
MS.gene86601.t1 | AT3G60490 | 61.333 | 75 | 29 | 0 | 63 | 137 | 71 | 145 | 1.30e-26 | 104 |
MS.gene86601.t1 | AT2G36450 | 58.025 | 81 | 33 | 1 | 51 | 130 | 3 | 83 | 1.91e-24 | 96.7 |
MS.gene86601.t1 | AT1G71450 | 39.855 | 138 | 81 | 1 | 62 | 199 | 23 | 158 | 6.59e-24 | 95.1 |
MS.gene86601.t1 | AT2G47520 | 44.000 | 100 | 52 | 1 | 22 | 121 | 13 | 108 | 2.78e-21 | 88.2 |
MS.gene86601.t1 | AT1G33760 | 51.648 | 91 | 44 | 0 | 63 | 153 | 20 | 110 | 2.60e-20 | 85.9 |
MS.gene86601.t1 | AT5G52020 | 42.177 | 147 | 76 | 3 | 59 | 197 | 61 | 206 | 2.71e-20 | 87.0 |
MS.gene86601.t1 | AT1G77200 | 47.222 | 108 | 56 | 1 | 30 | 137 | 11 | 117 | 6.13e-20 | 86.3 |
MS.gene86601.t1 | AT1G21910 | 45.652 | 92 | 43 | 1 | 63 | 147 | 50 | 141 | 1.15e-18 | 82.4 |
MS.gene86601.t1 | AT4G13620 | 52.564 | 78 | 36 | 1 | 44 | 120 | 212 | 289 | 3.50e-18 | 83.2 |
MS.gene86601.t1 | AT3G16770 | 53.846 | 78 | 29 | 1 | 43 | 120 | 66 | 136 | 4.46e-18 | 81.3 |
MS.gene86601.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 58 | 120 | 27 | 88 | 9.27e-18 | 77.8 |
MS.gene86601.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 58 | 120 | 27 | 88 | 1.00e-17 | 78.2 |
MS.gene86601.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 58 | 120 | 27 | 88 | 1.00e-17 | 78.2 |
MS.gene86601.t1 | AT1G22190 | 53.425 | 73 | 32 | 1 | 48 | 120 | 70 | 140 | 1.19e-17 | 80.1 |
MS.gene86601.t1 | AT4G39780 | 57.377 | 61 | 26 | 0 | 58 | 118 | 88 | 148 | 3.14e-17 | 79.3 |
MS.gene86601.t1 | AT5G21960 | 46.429 | 84 | 45 | 0 | 61 | 144 | 5 | 88 | 4.77e-17 | 77.8 |
MS.gene86601.t1 | AT2G20880 | 35.338 | 133 | 79 | 2 | 39 | 171 | 165 | 290 | 1.51e-16 | 78.2 |
MS.gene86601.t1 | AT2G22200 | 57.627 | 59 | 25 | 0 | 62 | 120 | 70 | 128 | 2.67e-16 | 76.6 |
MS.gene86601.t1 | AT5G65130 | 37.984 | 129 | 67 | 3 | 4 | 120 | 43 | 170 | 3.67e-16 | 76.6 |
MS.gene86601.t1 | AT5G65130 | 37.984 | 129 | 67 | 3 | 4 | 120 | 41 | 168 | 3.80e-16 | 76.3 |
MS.gene86601.t1 | AT4G06746 | 51.613 | 62 | 30 | 0 | 63 | 124 | 36 | 97 | 4.10e-16 | 73.6 |
MS.gene86601.t1 | AT3G50260 | 44.681 | 94 | 41 | 3 | 56 | 144 | 14 | 101 | 5.98e-16 | 73.2 |
MS.gene86601.t1 | AT4G36900 | 55.000 | 60 | 27 | 0 | 59 | 118 | 26 | 85 | 7.04e-16 | 74.3 |
MS.gene86601.t1 | AT1G12630 | 60.811 | 74 | 28 | 1 | 59 | 132 | 15 | 87 | 7.53e-16 | 73.9 |
MS.gene86601.t1 | AT1G78080 | 57.627 | 59 | 25 | 0 | 62 | 120 | 151 | 209 | 7.54e-16 | 76.3 |
MS.gene86601.t1 | AT2G33710 | 47.500 | 80 | 37 | 1 | 58 | 132 | 65 | 144 | 8.69e-16 | 74.3 |
MS.gene86601.t1 | AT2G33710 | 46.341 | 82 | 39 | 1 | 58 | 134 | 65 | 146 | 1.29e-15 | 74.3 |
MS.gene86601.t1 | AT3G11020 | 55.385 | 65 | 29 | 0 | 57 | 121 | 72 | 136 | 1.29e-15 | 75.5 |
MS.gene86601.t1 | AT1G71520 | 35.211 | 142 | 76 | 5 | 57 | 191 | 8 | 140 | 1.32e-15 | 72.0 |
MS.gene86601.t1 | AT2G23340 | 57.143 | 56 | 24 | 0 | 63 | 118 | 28 | 83 | 1.35e-15 | 72.8 |
MS.gene86601.t1 | AT5G67190 | 55.357 | 56 | 25 | 0 | 63 | 118 | 21 | 76 | 1.72e-15 | 72.8 |
MS.gene86601.t1 | AT5G05410 | 57.627 | 59 | 25 | 0 | 63 | 121 | 79 | 137 | 2.18e-15 | 74.7 |
MS.gene86601.t1 | AT1G19210 | 31.013 | 158 | 91 | 3 | 63 | 220 | 12 | 151 | 2.36e-15 | 72.4 |
MS.gene86601.t1 | AT1G74930 | 41.860 | 86 | 50 | 0 | 63 | 148 | 21 | 106 | 2.94e-15 | 72.4 |
MS.gene86601.t1 | AT1G36060 | 59.649 | 57 | 23 | 0 | 62 | 118 | 142 | 198 | 3.10e-15 | 74.3 |
MS.gene86601.t1 | AT5G05410 | 58.929 | 56 | 23 | 0 | 63 | 118 | 79 | 134 | 3.11e-15 | 74.3 |
MS.gene86601.t1 | AT5G13330 | 50.685 | 73 | 31 | 2 | 59 | 131 | 37 | 104 | 4.35e-15 | 72.4 |
MS.gene86601.t1 | AT4G28140 | 54.237 | 59 | 27 | 0 | 62 | 120 | 142 | 200 | 4.83e-15 | 73.6 |
MS.gene86601.t1 | AT4G11140 | 44.444 | 81 | 36 | 2 | 63 | 143 | 87 | 158 | 5.59e-15 | 73.2 |
MS.gene86601.t1 | AT3G15210 | 58.929 | 56 | 23 | 0 | 63 | 118 | 25 | 80 | 1.17e-14 | 71.2 |
MS.gene86601.t1 | AT5G07580 | 49.367 | 79 | 37 | 2 | 57 | 134 | 106 | 182 | 1.26e-14 | 70.9 |
MS.gene86601.t1 | AT1G75490 | 39.806 | 103 | 61 | 1 | 32 | 133 | 10 | 112 | 1.29e-14 | 70.9 |
MS.gene86601.t1 | AT1G72360 | 38.614 | 101 | 60 | 1 | 34 | 132 | 45 | 145 | 1.37e-14 | 71.6 |
MS.gene86601.t1 | AT5G44210 | 52.174 | 69 | 28 | 1 | 63 | 131 | 33 | 96 | 1.58e-14 | 70.5 |
MS.gene86601.t1 | AT5G61890 | 55.000 | 60 | 25 | 1 | 59 | 118 | 88 | 145 | 1.87e-14 | 71.2 |
MS.gene86601.t1 | AT3G57600 | 57.143 | 56 | 24 | 0 | 63 | 118 | 28 | 83 | 2.32e-14 | 71.2 |
MS.gene86601.t1 | AT5G61600 | 59.016 | 61 | 22 | 2 | 59 | 118 | 86 | 144 | 3.39e-14 | 70.5 |
MS.gene86601.t1 | AT1G15360 | 57.143 | 56 | 24 | 0 | 63 | 118 | 7 | 62 | 6.78e-14 | 68.9 |
MS.gene86601.t1 | AT1G15360 | 57.143 | 56 | 24 | 0 | 63 | 118 | 7 | 62 | 6.78e-14 | 68.9 |
MS.gene86601.t1 | AT4G27950 | 46.575 | 73 | 37 | 1 | 63 | 135 | 118 | 188 | 7.20e-14 | 70.5 |
MS.gene86601.t1 | AT1G03800 | 50.000 | 68 | 31 | 1 | 51 | 118 | 44 | 108 | 7.69e-14 | 69.3 |
MS.gene86601.t1 | AT5G51190 | 55.556 | 63 | 25 | 2 | 57 | 118 | 68 | 128 | 9.74e-14 | 68.9 |
MS.gene86601.t1 | AT1G72360 | 44.304 | 79 | 42 | 1 | 56 | 132 | 18 | 96 | 1.08e-13 | 68.6 |
MS.gene86601.t1 | AT4G31060 | 41.237 | 97 | 49 | 3 | 53 | 146 | 22 | 113 | 1.14e-13 | 67.8 |
MS.gene86601.t1 | AT1G22810 | 39.785 | 93 | 41 | 2 | 63 | 147 | 14 | 99 | 1.46e-13 | 66.6 |
MS.gene86601.t1 | AT1G72360 | 44.304 | 79 | 42 | 1 | 56 | 132 | 69 | 147 | 1.64e-13 | 68.9 |
MS.gene86601.t1 | AT5G47230 | 38.462 | 117 | 67 | 4 | 4 | 118 | 99 | 212 | 1.70e-13 | 69.3 |
MS.gene86601.t1 | AT5G43410 | 53.333 | 60 | 27 | 1 | 60 | 118 | 12 | 71 | 1.71e-13 | 66.2 |
MS.gene86601.t1 | AT3G61630 | 46.154 | 78 | 36 | 1 | 63 | 140 | 105 | 176 | 1.71e-13 | 69.3 |
MS.gene86601.t1 | AT5G64750 | 45.714 | 70 | 37 | 1 | 73 | 142 | 195 | 263 | 3.07e-13 | 68.9 |
MS.gene86601.t1 | AT5G25390 | 53.571 | 56 | 26 | 0 | 63 | 118 | 7 | 62 | 4.32e-13 | 66.2 |
MS.gene86601.t1 | AT5G53290 | 40.909 | 88 | 51 | 1 | 32 | 119 | 95 | 181 | 4.40e-13 | 68.6 |
MS.gene86601.t1 | AT5G19790 | 47.436 | 78 | 37 | 2 | 44 | 120 | 5 | 79 | 5.75e-13 | 67.0 |
MS.gene86601.t1 | AT3G23230 | 54.386 | 57 | 25 | 1 | 63 | 118 | 20 | 76 | 7.02e-13 | 64.7 |
MS.gene86601.t1 | AT5G25190 | 57.143 | 56 | 24 | 0 | 63 | 118 | 8 | 63 | 1.17e-12 | 65.1 |
MS.gene86601.t1 | AT3G20310 | 51.613 | 62 | 30 | 0 | 57 | 118 | 21 | 82 | 1.21e-12 | 66.2 |
MS.gene86601.t1 | AT1G28360 | 57.143 | 56 | 24 | 0 | 63 | 118 | 12 | 67 | 1.64e-12 | 64.7 |
MS.gene86601.t1 | AT1G28370 | 53.571 | 56 | 26 | 0 | 63 | 118 | 20 | 75 | 2.24e-12 | 63.9 |
MS.gene86601.t1 | AT5G18450 | 54.386 | 57 | 26 | 0 | 62 | 118 | 33 | 89 | 2.31e-12 | 65.9 |
MS.gene86601.t1 | AT4G23750 | 50.877 | 57 | 28 | 0 | 63 | 119 | 122 | 178 | 3.05e-12 | 65.9 |
MS.gene86601.t1 | AT4G23750 | 50.877 | 57 | 28 | 0 | 63 | 119 | 122 | 178 | 3.05e-12 | 65.9 |
MS.gene86601.t1 | AT1G28370 | 53.571 | 56 | 26 | 0 | 63 | 118 | 58 | 113 | 3.08e-12 | 64.3 |
MS.gene86601.t1 | AT2G40340 | 46.377 | 69 | 37 | 0 | 63 | 131 | 14 | 82 | 3.22e-12 | 65.5 |
MS.gene86601.t1 | AT2G40340 | 46.377 | 69 | 37 | 0 | 63 | 131 | 14 | 82 | 3.22e-12 | 65.5 |
MS.gene86601.t1 | AT2G40340 | 46.377 | 69 | 37 | 0 | 63 | 131 | 14 | 82 | 3.22e-12 | 65.5 |
MS.gene86601.t1 | AT1G50640 | 55.357 | 56 | 25 | 0 | 63 | 118 | 28 | 83 | 4.53e-12 | 64.3 |
MS.gene86601.t1 | AT4G17490 | 53.125 | 64 | 27 | 2 | 56 | 118 | 132 | 193 | 4.80e-12 | 64.7 |
MS.gene86601.t1 | AT5G47220 | 54.386 | 57 | 25 | 1 | 63 | 118 | 117 | 173 | 7.26e-12 | 63.9 |
MS.gene86601.t1 | AT2G40340 | 46.377 | 69 | 37 | 0 | 63 | 131 | 79 | 147 | 7.58e-12 | 64.7 |
MS.gene86601.t1 | AT2G46310 | 31.818 | 132 | 83 | 3 | 63 | 191 | 99 | 226 | 7.72e-12 | 64.3 |
MS.gene86601.t1 | AT2G40340 | 46.377 | 69 | 37 | 0 | 63 | 131 | 72 | 140 | 8.18e-12 | 64.7 |
MS.gene86601.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 63 | 118 | 72 | 127 | 8.56e-12 | 64.3 |
MS.gene86601.t1 | AT5G61590 | 50.000 | 84 | 39 | 2 | 49 | 131 | 95 | 176 | 2.02e-11 | 62.0 |
MS.gene86601.t1 | AT1G12890 | 42.308 | 78 | 42 | 1 | 41 | 118 | 2 | 76 | 2.17e-11 | 62.4 |
MS.gene86601.t1 | AT3G23240 | 35.135 | 111 | 60 | 3 | 13 | 119 | 37 | 139 | 3.98e-11 | 61.6 |
MS.gene86601.t1 | AT1G12980 | 49.254 | 67 | 33 | 1 | 63 | 128 | 57 | 123 | 4.01e-11 | 62.4 |
MS.gene86601.t1 | AT4G17500 | 54.386 | 57 | 25 | 1 | 63 | 118 | 148 | 204 | 5.10e-11 | 61.6 |
MS.gene86601.t1 | AT2G40350 | 50.000 | 56 | 28 | 0 | 63 | 118 | 74 | 129 | 5.36e-11 | 60.1 |
MS.gene86601.t1 | AT2G40350 | 50.000 | 56 | 28 | 0 | 63 | 118 | 67 | 122 | 6.24e-11 | 59.7 |
MS.gene86601.t1 | AT1G77640 | 44.444 | 90 | 44 | 1 | 63 | 146 | 43 | 132 | 9.23e-11 | 60.8 |
MS.gene86601.t1 | AT1G24590 | 53.571 | 56 | 26 | 0 | 63 | 118 | 58 | 113 | 9.72e-11 | 61.2 |
Find 79 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCTGAGTAGTGGCAGGTTT+GGG | 0.159834 | 6.1:-50841558 | None:intergenic |
TTCCTCCCTGCACGCTTCTT+TGG | 0.216980 | 6.1:-50841318 | None:intergenic |
GGAAGAGGAACTTAGATAAA+TGG | 0.256718 | 6.1:+50841382 | MS.gene86601:CDS |
CAAATCTTAGTCTTCTTGTT+TGG | 0.292823 | 6.1:-50841423 | None:intergenic |
TGCCTGAGTAGTGGCAGGTT+TGG | 0.308044 | 6.1:-50841559 | None:intergenic |
GACTCGCCACCCGGTATATA+GGG | 0.321867 | 6.1:+50841353 | MS.gene86601:CDS |
AATGAACTCTCGGAGCAATT+TGG | 0.335539 | 6.1:-50841228 | None:intergenic |
AGACTCGCCACCCGGTATAT+AGG | 0.350439 | 6.1:+50841352 | MS.gene86601:CDS |
ATGAAAGAAGAATAGAAGTT+TGG | 0.359614 | 6.1:+50842101 | MS.gene86601:CDS |
ATGTGCCCGGGCTGCCATCT+CGG | 0.389113 | 6.1:-50841466 | None:intergenic |
TGGAGAAAAGGGGTTTGAAT+AGG | 0.392952 | 6.1:-50841208 | None:intergenic |
CTCGGAGCAATTTGGAGAAA+AGG | 0.393446 | 6.1:-50841220 | None:intergenic |
TCGGAGCAATTTGGAGAAAA+GGG | 0.400084 | 6.1:-50841219 | None:intergenic |
CAAACAAGAAGACTAAGATT+TGG | 0.423028 | 6.1:+50841424 | MS.gene86601:CDS |
AACGGCCGAGATGGCAGCCC+GGG | 0.433235 | 6.1:+50841461 | MS.gene86601:CDS |
GAAGAGGAACTTAGATAAAT+GGG | 0.434368 | 6.1:+50841383 | MS.gene86601:CDS |
TCCTTTGCCTGAGTAGTGGC+AGG | 0.438785 | 6.1:-50841564 | None:intergenic |
ATGTCTCCTACACATAGCTT+TGG | 0.440249 | 6.1:+50841765 | MS.gene86601:CDS |
TGTCTCCTACACATAGCTTT+GGG | 0.457669 | 6.1:+50841766 | MS.gene86601:CDS |
TTGCAGCAACATCATGTGCC+CGG | 0.458299 | 6.1:-50841479 | None:intergenic |
TGAACACGCCAGAGTTGTTA+AGG | 0.458627 | 6.1:+50841730 | MS.gene86601:CDS |
TTGGTCATCGAAATCTTGTC+TGG | 0.470061 | 6.1:-50841627 | None:intergenic |
TTCCTCACACCCCTATATAC+CGG | 0.471420 | 6.1:-50841363 | None:intergenic |
GGAGCAGAGTAGGCTTTGTA+TGG | 0.473233 | 6.1:+50841686 | MS.gene86601:CDS |
TATAGTTGTGTCAATGTCAT+TGG | 0.480491 | 6.1:-50841646 | None:intergenic |
CGGGCTGCCATCTCGGCCGT+TGG | 0.483646 | 6.1:-50841459 | None:intergenic |
CTGTCTCAACTTTGCAGACT+CGG | 0.497832 | 6.1:+50841524 | MS.gene86601:CDS |
TATATAGGGGTGTGAGGAAG+AGG | 0.500596 | 6.1:+50841367 | MS.gene86601:CDS |
TTGTATGGAGGAGGAAGAAG+AGG | 0.515214 | 6.1:+50841701 | MS.gene86601:CDS |
CAACGGCCGAGATGGCAGCC+CGG | 0.515364 | 6.1:+50841460 | MS.gene86601:CDS |
TGTTGCTGCAATGGCATTGA+GGG | 0.516104 | 6.1:+50841491 | MS.gene86601:CDS |
ACGACTCCAAAGAAGCGTGC+AGG | 0.519720 | 6.1:+50841312 | MS.gene86601:CDS |
GTCATATTCCTTAACAACTC+TGG | 0.523128 | 6.1:-50841738 | None:intergenic |
TCAGGCAAAGGATATACAAA+AGG | 0.524512 | 6.1:+50841575 | MS.gene86601:CDS |
GGCACATGATGTTGCTGCAA+TGG | 0.528766 | 6.1:+50841482 | MS.gene86601:CDS |
CCTGAGTAGTGGCAGGTTTG+GGG | 0.529535 | 6.1:-50841557 | None:intergenic |
GCGAATTCAGAGGGTTCTCA+AGG | 0.530969 | 6.1:+50841252 | MS.gene86601:CDS |
CGAGTCTGCAAAGTTGAGAC+AGG | 0.531819 | 6.1:-50841523 | None:intergenic |
TGCAGCAACATCATGTGCCC+GGG | 0.532575 | 6.1:-50841478 | None:intergenic |
CGGAGCAATTTGGAGAAAAG+GGG | 0.533954 | 6.1:-50841218 | None:intergenic |
TGAATTCGCAAATGAACTCT+CGG | 0.538349 | 6.1:-50841238 | None:intergenic |
TAAATGGGTGTGTGAAATGA+GGG | 0.541686 | 6.1:+50841398 | MS.gene86601:CDS |
GAGTAGGCTTTGTATGGAGG+AGG | 0.548480 | 6.1:+50841692 | MS.gene86601:CDS |
TATATCCTTTGCCTGAGTAG+TGG | 0.549868 | 6.1:-50841568 | None:intergenic |
CCCCAAACCTGCCACTACTC+AGG | 0.549875 | 6.1:+50841557 | MS.gene86601:CDS |
AGTTCATTTGCGAATTCAGA+GGG | 0.558084 | 6.1:+50841243 | MS.gene86601:CDS |
GTTCAAGGAGACTCGCCACC+CGG | 0.558195 | 6.1:+50841344 | MS.gene86601:CDS |
GGCAGCTACAGAGGCTGCCG+AGG | 0.559043 | 6.1:+50841596 | MS.gene86601:CDS |
ACTCTGCTCCTCTACGGTAG+AGG | 0.562673 | 6.1:-50841673 | None:intergenic |
CTACCGTAGAGGAGCAGAGT+AGG | 0.564890 | 6.1:+50841676 | MS.gene86601:CDS |
CGACTCCAAAGAAGCGTGCA+GGG | 0.565965 | 6.1:+50841313 | MS.gene86601:CDS |
TGCAGGGAGGAAGAAGTTCA+AGG | 0.566465 | 6.1:+50841329 | MS.gene86601:CDS |
ATGTTGCTGCAATGGCATTG+AGG | 0.567199 | 6.1:+50841490 | MS.gene86601:CDS |
TCAACTTTGCAGACTCGGCA+TGG | 0.569320 | 6.1:+50841529 | MS.gene86601:CDS |
AGCTAACCTCACTTCCTCGT+TGG | 0.571780 | 6.1:-50841286 | None:intergenic |
AAGAAGACTAAGATTTGGCT+AGG | 0.578791 | 6.1:+50841429 | MS.gene86601:CDS |
TCCTCACACCCCTATATACC+GGG | 0.585609 | 6.1:-50841362 | None:intergenic |
CTTGTCTGGTCTGAAAGCCT+CGG | 0.585700 | 6.1:-50841613 | None:intergenic |
ATAAATGGGTGTGTGAAATG+AGG | 0.586819 | 6.1:+50841397 | MS.gene86601:CDS |
GCAGAGTAGGCTTTGTATGG+AGG | 0.587610 | 6.1:+50841689 | MS.gene86601:CDS |
AAGCCTACTCTGCTCCTCTA+CGG | 0.589135 | 6.1:-50841679 | None:intergenic |
ACCTGCCACTACTCAGGCAA+AGG | 0.590128 | 6.1:+50841563 | MS.gene86601:CDS |
CGAATTCAGAGGGTTCTCAA+GGG | 0.590953 | 6.1:+50841253 | MS.gene86601:CDS |
GAGTTCATTTGCGAATTCAG+AGG | 0.592725 | 6.1:+50841242 | MS.gene86601:CDS |
TTTCATATATAATAATAGAA+CGG | 0.594515 | 6.1:-50842084 | None:intergenic |
TATACAAAAGGCAGCTACAG+AGG | 0.596389 | 6.1:+50841587 | MS.gene86601:CDS |
CAATTTCCAACGAGGAAGTG+AGG | 0.611060 | 6.1:+50841280 | MS.gene86601:CDS |
TTATACCCAAAGCTATGTGT+AGG | 0.616558 | 6.1:-50841771 | None:intergenic |
CTGCTCCTCTACGGTAGAGG+CGG | 0.647289 | 6.1:-50841670 | None:intergenic |
ACTCGCCACCCGGTATATAG+GGG | 0.659441 | 6.1:+50841354 | MS.gene86601:CDS |
ACCCGGTATATAGGGGTGTG+AGG | 0.669533 | 6.1:+50841361 | MS.gene86601:CDS |
CAAAGTTGAGACAGGCGTAG+CGG | 0.672645 | 6.1:-50841515 | None:intergenic |
TATAGCCGCCTCTACCGTAG+AGG | 0.674897 | 6.1:+50841665 | MS.gene86601:CDS |
TGTATGGAGGAGGAAGAAGA+GGG | 0.693453 | 6.1:+50841702 | MS.gene86601:CDS |
GTTGCTGCAATGGCATTGAG+GGG | 0.701669 | 6.1:+50841492 | MS.gene86601:CDS |
CTCCAAAGAAGCGTGCAGGG+AGG | 0.735252 | 6.1:+50841316 | MS.gene86601:CDS |
TCACACCCCTATATACCGGG+TGG | 0.772358 | 6.1:-50841359 | None:intergenic |
ACTTTGCAGACTCGGCATGG+CGG | 0.774719 | 6.1:+50841532 | MS.gene86601:CDS |
AGGGATGTCAATTTCCAACG+AGG | 0.794906 | 6.1:+50841272 | MS.gene86601:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATATTTTTTTTTTATTTA+TGG | + | chr6.1:50841916-50841935 | MS.gene86601:intron | 0.0% |
!! | TTTCATATATAATAATAGAA+CGG | - | chr6.1:50842087-50842106 | None:intergenic | 10.0% |
!!! | ATGAATAGCTTTTTTAATTA+TGG | + | chr6.1:50841884-50841903 | MS.gene86601:intron | 15.0% |
!! | TTGATTCTTCATATATACAT+AGG | + | chr6.1:50841986-50842005 | MS.gene86601:intron | 20.0% |
!!! | TTTATTTATGGATTGTAGAA+TGG | + | chr6.1:50841928-50841947 | MS.gene86601:intron | 20.0% |
! | ATGAAAGAAGAATAGAAGTT+TGG | + | chr6.1:50842101-50842120 | MS.gene86601:CDS | 25.0% |
CAAACAAGAAGACTAAGATT+TGG | + | chr6.1:50841424-50841443 | MS.gene86601:CDS | 30.0% | |
GAAGAGGAACTTAGATAAAT+GGG | + | chr6.1:50841383-50841402 | MS.gene86601:CDS | 30.0% | |
TATAGTTGTGTCAATGTCAT+TGG | - | chr6.1:50841649-50841668 | None:intergenic | 30.0% | |
! | CAAATCTTAGTCTTCTTGTT+TGG | - | chr6.1:50841426-50841445 | None:intergenic | 30.0% |
!! | TCAAGATTTTCAAGATGAAG+AGG | + | chr6.1:50841824-50841843 | MS.gene86601:CDS | 30.0% |
AAGAAGACTAAGATTTGGCT+AGG | + | chr6.1:50841429-50841448 | MS.gene86601:CDS | 35.0% | |
AGTTCATTTGCGAATTCAGA+GGG | + | chr6.1:50841243-50841262 | MS.gene86601:CDS | 35.0% | |
ATAAATGGGTGTGTGAAATG+AGG | + | chr6.1:50841397-50841416 | MS.gene86601:CDS | 35.0% | |
GGAAGAGGAACTTAGATAAA+TGG | + | chr6.1:50841382-50841401 | MS.gene86601:CDS | 35.0% | |
GTCATATTCCTTAACAACTC+TGG | - | chr6.1:50841741-50841760 | None:intergenic | 35.0% | |
TAAATGGGTGTGTGAAATGA+GGG | + | chr6.1:50841398-50841417 | MS.gene86601:CDS | 35.0% | |
TCAGGCAAAGGATATACAAA+AGG | + | chr6.1:50841575-50841594 | MS.gene86601:CDS | 35.0% | |
TGAATTCGCAAATGAACTCT+CGG | - | chr6.1:50841241-50841260 | None:intergenic | 35.0% | |
TTATACCCAAAGCTATGTGT+AGG | - | chr6.1:50841774-50841793 | None:intergenic | 35.0% | |
! | TGCATTCTTTTCTGTAATGC+AGG | + | chr6.1:50842033-50842052 | MS.gene86601:intron | 35.0% |
!! | AAGATGAAGAGGTATCTCTA+TGG | + | chr6.1:50841835-50841854 | MS.gene86601:intron | 35.0% |
AATGAACTCTCGGAGCAATT+TGG | - | chr6.1:50841231-50841250 | None:intergenic | 40.0% | |
ATGTCTCCTACACATAGCTT+TGG | + | chr6.1:50841765-50841784 | MS.gene86601:CDS | 40.0% | |
GAGTTCATTTGCGAATTCAG+AGG | + | chr6.1:50841242-50841261 | MS.gene86601:CDS | 40.0% | |
TATACAAAAGGCAGCTACAG+AGG | + | chr6.1:50841587-50841606 | MS.gene86601:CDS | 40.0% | |
TATATCCTTTGCCTGAGTAG+TGG | - | chr6.1:50841571-50841590 | None:intergenic | 40.0% | |
TCGGAGCAATTTGGAGAAAA+GGG | - | chr6.1:50841222-50841241 | None:intergenic | 40.0% | |
TGGAGAAAAGGGGTTTGAAT+AGG | - | chr6.1:50841211-50841230 | None:intergenic | 40.0% | |
TGTCTCCTACACATAGCTTT+GGG | + | chr6.1:50841766-50841785 | MS.gene86601:CDS | 40.0% | |
TTGGTCATCGAAATCTTGTC+TGG | - | chr6.1:50841630-50841649 | None:intergenic | 40.0% | |
AGGGATGTCAATTTCCAACG+AGG | + | chr6.1:50841272-50841291 | MS.gene86601:CDS | 45.0% | |
ATGTTGCTGCAATGGCATTG+AGG | + | chr6.1:50841490-50841509 | MS.gene86601:CDS | 45.0% | |
CAATTTCCAACGAGGAAGTG+AGG | + | chr6.1:50841280-50841299 | MS.gene86601:CDS | 45.0% | |
CGAATTCAGAGGGTTCTCAA+GGG | + | chr6.1:50841253-50841272 | MS.gene86601:CDS | 45.0% | |
CGGAGCAATTTGGAGAAAAG+GGG | - | chr6.1:50841221-50841240 | None:intergenic | 45.0% | |
CTCGGAGCAATTTGGAGAAA+AGG | - | chr6.1:50841223-50841242 | None:intergenic | 45.0% | |
CTGTCTCAACTTTGCAGACT+CGG | + | chr6.1:50841524-50841543 | MS.gene86601:CDS | 45.0% | |
TGAACACGCCAGAGTTGTTA+AGG | + | chr6.1:50841730-50841749 | MS.gene86601:CDS | 45.0% | |
TGTATGGAGGAGGAAGAAGA+GGG | + | chr6.1:50841702-50841721 | MS.gene86601:CDS | 45.0% | |
TTCCTCACACCCCTATATAC+CGG | - | chr6.1:50841366-50841385 | None:intergenic | 45.0% | |
TTGTATGGAGGAGGAAGAAG+AGG | + | chr6.1:50841701-50841720 | MS.gene86601:CDS | 45.0% | |
! | TATATAGGGGTGTGAGGAAG+AGG | + | chr6.1:50841367-50841386 | MS.gene86601:CDS | 45.0% |
! | TGTTGCTGCAATGGCATTGA+GGG | + | chr6.1:50841491-50841510 | MS.gene86601:CDS | 45.0% |
! | TTGGCTAGGCACTTTTCCAA+CGG | + | chr6.1:50841443-50841462 | MS.gene86601:CDS | 45.0% |
AAGCCTACTCTGCTCCTCTA+CGG | - | chr6.1:50841682-50841701 | None:intergenic | 50.0% | |
AGCTAACCTCACTTCCTCGT+TGG | - | chr6.1:50841289-50841308 | None:intergenic | 50.0% | |
CAAAGTTGAGACAGGCGTAG+CGG | - | chr6.1:50841518-50841537 | None:intergenic | 50.0% | |
CGAGTCTGCAAAGTTGAGAC+AGG | - | chr6.1:50841526-50841545 | None:intergenic | 50.0% | |
CTTGTCTGGTCTGAAAGCCT+CGG | - | chr6.1:50841616-50841635 | None:intergenic | 50.0% | |
GCGAATTCAGAGGGTTCTCA+AGG | + | chr6.1:50841252-50841271 | MS.gene86601:CDS | 50.0% | |
GGCACATGATGTTGCTGCAA+TGG | + | chr6.1:50841482-50841501 | MS.gene86601:CDS | 50.0% | |
TCAACTTTGCAGACTCGGCA+TGG | + | chr6.1:50841529-50841548 | MS.gene86601:CDS | 50.0% | |
TCCTCACACCCCTATATACC+GGG | - | chr6.1:50841365-50841384 | None:intergenic | 50.0% | |
TGCAGGGAGGAAGAAGTTCA+AGG | + | chr6.1:50841329-50841348 | MS.gene86601:CDS | 50.0% | |
TTGCAGCAACATCATGTGCC+CGG | - | chr6.1:50841482-50841501 | None:intergenic | 50.0% | |
! | GAGTAGGCTTTGTATGGAGG+AGG | + | chr6.1:50841692-50841711 | MS.gene86601:CDS | 50.0% |
! | GCAGAGTAGGCTTTGTATGG+AGG | + | chr6.1:50841689-50841708 | MS.gene86601:CDS | 50.0% |
! | GGAGCAGAGTAGGCTTTGTA+TGG | + | chr6.1:50841686-50841705 | MS.gene86601:CDS | 50.0% |
! | GTTGCTGCAATGGCATTGAG+GGG | + | chr6.1:50841492-50841511 | MS.gene86601:CDS | 50.0% |
ACCTGCCACTACTCAGGCAA+AGG | + | chr6.1:50841563-50841582 | MS.gene86601:CDS | 55.0% | |
ACTCGCCACCCGGTATATAG+GGG | + | chr6.1:50841354-50841373 | MS.gene86601:CDS | 55.0% | |
ACTCTGCTCCTCTACGGTAG+AGG | - | chr6.1:50841676-50841695 | None:intergenic | 55.0% | |
ACTTTGCAGACTCGGCATGG+CGG | + | chr6.1:50841532-50841551 | MS.gene86601:CDS | 55.0% | |
AGACTCGCCACCCGGTATAT+AGG | + | chr6.1:50841352-50841371 | MS.gene86601:CDS | 55.0% | |
CCTGAGTAGTGGCAGGTTTG+GGG | - | chr6.1:50841560-50841579 | None:intergenic | 55.0% | |
CTACCGTAGAGGAGCAGAGT+AGG | + | chr6.1:50841676-50841695 | MS.gene86601:CDS | 55.0% | |
GACTCGCCACCCGGTATATA+GGG | + | chr6.1:50841353-50841372 | MS.gene86601:CDS | 55.0% | |
GCCTGAGTAGTGGCAGGTTT+GGG | - | chr6.1:50841561-50841580 | None:intergenic | 55.0% | |
TATAGCCGCCTCTACCGTAG+AGG | + | chr6.1:50841665-50841684 | MS.gene86601:CDS | 55.0% | |
TCACACCCCTATATACCGGG+TGG | - | chr6.1:50841362-50841381 | None:intergenic | 55.0% | |
TCCTTTGCCTGAGTAGTGGC+AGG | - | chr6.1:50841567-50841586 | None:intergenic | 55.0% | |
TGCAGCAACATCATGTGCCC+GGG | - | chr6.1:50841481-50841500 | None:intergenic | 55.0% | |
TGCCTGAGTAGTGGCAGGTT+TGG | - | chr6.1:50841562-50841581 | None:intergenic | 55.0% | |
TTCCTCCCTGCACGCTTCTT+TGG | - | chr6.1:50841321-50841340 | None:intergenic | 55.0% | |
! | ACCCGGTATATAGGGGTGTG+AGG | + | chr6.1:50841361-50841380 | MS.gene86601:CDS | 55.0% |
! | ACGACTCCAAAGAAGCGTGC+AGG | + | chr6.1:50841312-50841331 | MS.gene86601:CDS | 55.0% |
! | CACTTTTCCAACGGCCGAGA+TGG | + | chr6.1:50841452-50841471 | MS.gene86601:CDS | 55.0% |
! | CGACTCCAAAGAAGCGTGCA+GGG | + | chr6.1:50841313-50841332 | MS.gene86601:CDS | 55.0% |
CCCCAAACCTGCCACTACTC+AGG | + | chr6.1:50841557-50841576 | MS.gene86601:CDS | 60.0% | |
CTGCTCCTCTACGGTAGAGG+CGG | - | chr6.1:50841673-50841692 | None:intergenic | 60.0% | |
GTTCAAGGAGACTCGCCACC+CGG | + | chr6.1:50841344-50841363 | MS.gene86601:CDS | 60.0% | |
! | CTCCAAAGAAGCGTGCAGGG+AGG | + | chr6.1:50841316-50841335 | MS.gene86601:CDS | 60.0% |
ATGTGCCCGGGCTGCCATCT+CGG | - | chr6.1:50841469-50841488 | None:intergenic | 65.0% | |
AACGGCCGAGATGGCAGCCC+GGG | + | chr6.1:50841461-50841480 | MS.gene86601:CDS | 70.0% | |
CAACGGCCGAGATGGCAGCC+CGG | + | chr6.1:50841460-50841479 | MS.gene86601:CDS | 70.0% | |
GGCAGCTACAGAGGCTGCCG+AGG | + | chr6.1:50841596-50841615 | MS.gene86601:CDS | 70.0% | |
CGGGCTGCCATCTCGGCCGT+TGG | - | chr6.1:50841462-50841481 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 50841183 | 50842156 | 50841183 | ID=MS.gene86601 |
chr6.1 | mRNA | 50841183 | 50842156 | 50841183 | ID=MS.gene86601.t1;Parent=MS.gene86601 |
chr6.1 | exon | 50841183 | 50841845 | 50841183 | ID=MS.gene86601.t1.exon1;Parent=MS.gene86601.t1 |
chr6.1 | CDS | 50841183 | 50841845 | 50841183 | ID=cds.MS.gene86601.t1;Parent=MS.gene86601.t1 |
chr6.1 | exon | 50842055 | 50842156 | 50842055 | ID=MS.gene86601.t1.exon2;Parent=MS.gene86601.t1 |
chr6.1 | CDS | 50842055 | 50842156 | 50842055 | ID=cds.MS.gene86601.t1;Parent=MS.gene86601.t1 |
Gene Sequence |
Protein sequence |