Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86591.t1 | ABV22882.2 | 94 | 216 | 13 | 0 | 1 | 216 | 1 | 216 | 6.50E-110 | 406.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86591.t1 | Q9SYS6 | 50.0 | 220 | 97 | 4 | 5 | 216 | 2 | 216 | 5.1e-47 | 189.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86591.t1 | B5KKL4 | 94.0 | 216 | 13 | 0 | 1 | 216 | 1 | 216 | 4.7e-110 | 406.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene86591.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86591.t1 | MTR_6g465420 | 90.000 | 210 | 21 | 0 | 1 | 210 | 1 | 210 | 3.12e-136 | 382 |
MS.gene86591.t1 | MTR_6g465450 | 85.308 | 211 | 30 | 1 | 1 | 210 | 1 | 211 | 1.47e-127 | 360 |
MS.gene86591.t1 | MTR_6g465430 | 88.152 | 211 | 23 | 2 | 1 | 210 | 1 | 210 | 2.47e-125 | 354 |
MS.gene86591.t1 | MTR_6g465460 | 86.256 | 211 | 26 | 2 | 1 | 210 | 1 | 209 | 2.52e-123 | 350 |
MS.gene86591.t1 | MTR_6g465530 | 75.758 | 198 | 41 | 3 | 24 | 216 | 3 | 198 | 1.45e-98 | 285 |
MS.gene86591.t1 | MTR_6g466000 | 70.000 | 200 | 48 | 3 | 27 | 216 | 30 | 227 | 2.60e-98 | 285 |
MS.gene86591.t1 | MTR_6g465510 | 75.980 | 204 | 34 | 2 | 27 | 216 | 6 | 208 | 4.40e-96 | 279 |
MS.gene86591.t1 | MTR_6g465690 | 69.266 | 218 | 48 | 4 | 4 | 208 | 5 | 216 | 2.74e-95 | 279 |
MS.gene86591.t1 | MTR_6g466130 | 73.822 | 191 | 48 | 2 | 27 | 216 | 39 | 228 | 2.97e-90 | 265 |
MS.gene86591.t1 | MTR_1g101600 | 58.462 | 195 | 78 | 2 | 22 | 216 | 9 | 200 | 7.08e-70 | 212 |
MS.gene86591.t1 | MTR_6g465850 | 51.613 | 248 | 64 | 4 | 24 | 216 | 33 | 279 | 3.39e-69 | 213 |
MS.gene86591.t1 | MTR_6g465990 | 57.500 | 200 | 53 | 4 | 27 | 216 | 16 | 193 | 9.04e-69 | 209 |
MS.gene86591.t1 | MTR_6g466020 | 57.297 | 185 | 57 | 4 | 29 | 213 | 18 | 180 | 5.67e-61 | 189 |
MS.gene86591.t1 | MTR_4g102660 | 55.288 | 208 | 75 | 8 | 24 | 216 | 14 | 218 | 2.23e-55 | 176 |
MS.gene86591.t1 | MTR_5g010930 | 47.291 | 203 | 90 | 4 | 29 | 216 | 24 | 224 | 1.36e-53 | 171 |
MS.gene86591.t1 | MTR_5g010940 | 45.536 | 224 | 102 | 5 | 10 | 216 | 7 | 227 | 1.08e-51 | 167 |
MS.gene86591.t1 | MTR_5g010910 | 46.535 | 202 | 90 | 5 | 30 | 216 | 24 | 222 | 3.71e-49 | 160 |
MS.gene86591.t1 | MTR_8g006410 | 59.341 | 91 | 37 | 0 | 38 | 128 | 36 | 126 | 2.28e-33 | 119 |
MS.gene86591.t1 | MTR_3g110205 | 56.436 | 101 | 44 | 0 | 43 | 143 | 32 | 132 | 3.30e-33 | 118 |
MS.gene86591.t1 | MTR_7g046260 | 56.842 | 95 | 41 | 0 | 34 | 128 | 41 | 135 | 2.16e-31 | 115 |
MS.gene86591.t1 | MTR_7g117690 | 63.750 | 80 | 29 | 0 | 49 | 128 | 23 | 102 | 3.45e-31 | 112 |
MS.gene86591.t1 | MTR_5g012910 | 63.291 | 79 | 29 | 0 | 50 | 128 | 24 | 102 | 1.73e-30 | 111 |
MS.gene86591.t1 | MTR_2g085015 | 60.000 | 90 | 34 | 2 | 48 | 135 | 41 | 130 | 2.09e-30 | 112 |
MS.gene86591.t1 | MTR_2g101340 | 40.805 | 174 | 91 | 2 | 21 | 188 | 8 | 175 | 2.30e-30 | 111 |
MS.gene86591.t1 | MTR_8g027465 | 51.376 | 109 | 46 | 3 | 24 | 128 | 11 | 116 | 4.05e-29 | 107 |
MS.gene86591.t1 | MTR_8g013860 | 50.806 | 124 | 59 | 2 | 24 | 145 | 15 | 138 | 1.02e-28 | 107 |
MS.gene86591.t1 | MTR_8g102800 | 55.769 | 104 | 44 | 1 | 38 | 141 | 23 | 124 | 4.87e-28 | 106 |
MS.gene86591.t1 | MTR_6g088405 | 61.538 | 78 | 30 | 0 | 51 | 128 | 41 | 118 | 1.25e-27 | 104 |
MS.gene86591.t1 | MTR_6g088425 | 51.163 | 129 | 52 | 2 | 17 | 135 | 3 | 130 | 8.52e-26 | 100 |
MS.gene86591.t1 | MTR_4g100650 | 60.256 | 78 | 31 | 0 | 51 | 128 | 71 | 148 | 1.57e-25 | 100 |
MS.gene86591.t1 | MTR_4g102670 | 56.962 | 79 | 33 | 1 | 50 | 128 | 11 | 88 | 3.44e-25 | 97.1 |
MS.gene86591.t1 | MTR_4g035430 | 53.608 | 97 | 40 | 1 | 39 | 135 | 22 | 113 | 4.44e-25 | 98.2 |
MS.gene86591.t1 | MTR_5g008590 | 37.569 | 181 | 89 | 4 | 54 | 215 | 11 | 186 | 3.58e-21 | 87.0 |
MS.gene86591.t1 | MTR_1g006660 | 60.759 | 79 | 31 | 0 | 50 | 128 | 43 | 121 | 3.69e-21 | 88.6 |
MS.gene86591.t1 | MTR_5g008550 | 35.443 | 158 | 85 | 4 | 54 | 200 | 21 | 172 | 1.17e-19 | 83.2 |
MS.gene86591.t1 | MTR_1g014780 | 35.036 | 137 | 73 | 2 | 25 | 154 | 18 | 145 | 6.33e-19 | 82.0 |
MS.gene86591.t1 | MTR_2g435590 | 54.545 | 66 | 30 | 0 | 47 | 112 | 89 | 154 | 1.56e-17 | 79.0 |
MS.gene86591.t1 | MTR_5g008470 | 37.143 | 105 | 66 | 0 | 56 | 160 | 77 | 181 | 2.22e-17 | 77.0 |
MS.gene86591.t1 | MTR_1g060910 | 36.310 | 168 | 71 | 6 | 38 | 189 | 3 | 150 | 2.49e-17 | 76.6 |
MS.gene86591.t1 | MTR_3g105510 | 41.509 | 106 | 44 | 1 | 54 | 159 | 37 | 124 | 2.53e-17 | 78.2 |
MS.gene86591.t1 | MTR_1g101550 | 43.972 | 141 | 69 | 3 | 54 | 185 | 57 | 196 | 2.99e-17 | 77.8 |
MS.gene86591.t1 | MTR_1g014820 | 43.478 | 92 | 48 | 1 | 53 | 140 | 26 | 117 | 3.29e-17 | 78.2 |
MS.gene86591.t1 | MTR_3g074130 | 54.167 | 72 | 31 | 1 | 38 | 109 | 136 | 205 | 6.58e-17 | 78.2 |
MS.gene86591.t1 | MTR_5g083340 | 62.069 | 58 | 22 | 0 | 54 | 111 | 85 | 142 | 8.63e-17 | 78.6 |
MS.gene86591.t1 | MTR_1g014860 | 39.394 | 99 | 53 | 1 | 49 | 140 | 17 | 115 | 1.06e-16 | 75.9 |
MS.gene86591.t1 | MTR_1g090170 | 57.377 | 61 | 26 | 0 | 49 | 109 | 147 | 207 | 1.66e-16 | 77.0 |
MS.gene86591.t1 | MTR_7g021010 | 43.820 | 89 | 49 | 1 | 45 | 132 | 2 | 90 | 1.90e-16 | 73.2 |
MS.gene86591.t1 | MTR_1g090170 | 55.556 | 63 | 28 | 0 | 49 | 111 | 234 | 296 | 2.56e-16 | 77.0 |
MS.gene86591.t1 | MTR_2g043050 | 44.706 | 85 | 47 | 0 | 53 | 137 | 18 | 102 | 2.67e-16 | 74.7 |
MS.gene86591.t1 | MTR_5g062700 | 59.322 | 59 | 24 | 0 | 53 | 111 | 172 | 230 | 2.93e-16 | 76.6 |
MS.gene86591.t1 | MTR_1g087920 | 38.211 | 123 | 64 | 3 | 1 | 121 | 32 | 144 | 2.98e-16 | 76.3 |
MS.gene86591.t1 | MTR_3g102100 | 58.929 | 56 | 23 | 0 | 54 | 109 | 45 | 100 | 3.75e-16 | 73.6 |
MS.gene86591.t1 | MTR_2g105380 | 42.268 | 97 | 51 | 1 | 18 | 109 | 76 | 172 | 3.81e-16 | 76.3 |
MS.gene86591.t1 | MTR_8g090350 | 59.649 | 57 | 23 | 0 | 53 | 109 | 112 | 168 | 4.22e-16 | 75.5 |
MS.gene86591.t1 | MTR_2g090235 | 59.322 | 59 | 24 | 0 | 53 | 111 | 217 | 275 | 4.82e-16 | 76.3 |
MS.gene86591.t1 | MTR_7g020980 | 51.562 | 64 | 31 | 0 | 50 | 113 | 47 | 110 | 5.67e-16 | 73.2 |
MS.gene86591.t1 | MTR_7g021010 | 43.820 | 89 | 49 | 1 | 45 | 132 | 41 | 129 | 6.56e-16 | 72.8 |
MS.gene86591.t1 | MTR_2g043030 | 41.758 | 91 | 53 | 0 | 53 | 143 | 18 | 108 | 7.51e-16 | 73.2 |
MS.gene86591.t1 | MTR_1g014800 | 42.222 | 90 | 45 | 1 | 53 | 135 | 30 | 119 | 7.54e-16 | 73.6 |
MS.gene86591.t1 | MTR_3g105480 | 41.346 | 104 | 43 | 1 | 56 | 159 | 33 | 118 | 8.37e-16 | 73.6 |
MS.gene86591.t1 | MTR_1g028560 | 57.895 | 57 | 24 | 0 | 54 | 110 | 115 | 171 | 1.25e-15 | 74.7 |
MS.gene86591.t1 | MTR_8g092460 | 38.095 | 105 | 62 | 1 | 54 | 155 | 145 | 249 | 1.97e-15 | 73.9 |
MS.gene86591.t1 | MTR_4g086220 | 60.714 | 56 | 22 | 0 | 54 | 109 | 96 | 151 | 2.99e-15 | 72.4 |
MS.gene86591.t1 | MTR_5g083330 | 50.685 | 73 | 36 | 0 | 39 | 111 | 20 | 92 | 3.40e-15 | 73.2 |
MS.gene86591.t1 | MTR_1g019110 | 51.613 | 62 | 30 | 0 | 54 | 115 | 44 | 105 | 4.14e-15 | 70.9 |
MS.gene86591.t1 | MTR_3g053690 | 56.923 | 65 | 25 | 1 | 45 | 109 | 21 | 82 | 5.50e-15 | 71.2 |
MS.gene86591.t1 | MTR_7g028925 | 55.000 | 60 | 24 | 1 | 53 | 112 | 28 | 84 | 6.20e-15 | 68.2 |
MS.gene86591.t1 | MTR_2g089170 | 60.714 | 56 | 22 | 0 | 54 | 109 | 65 | 120 | 7.82e-15 | 70.1 |
MS.gene86591.t1 | MTR_2g078680 | 50.000 | 76 | 35 | 1 | 34 | 109 | 14 | 86 | 8.39e-15 | 70.5 |
MS.gene86591.t1 | MTR_4g086160 | 58.929 | 56 | 23 | 0 | 54 | 109 | 96 | 151 | 9.21e-15 | 70.9 |
MS.gene86591.t1 | MTR_4g086190 | 58.929 | 56 | 23 | 0 | 54 | 109 | 96 | 151 | 1.03e-14 | 70.9 |
MS.gene86591.t1 | MTR_5g082950 | 60.714 | 56 | 22 | 0 | 54 | 109 | 66 | 121 | 1.12e-14 | 72.0 |
MS.gene86591.t1 | MTR_8g022820 | 43.038 | 79 | 42 | 1 | 47 | 125 | 117 | 192 | 1.24e-14 | 72.0 |
MS.gene86591.t1 | MTR_8g022820 | 43.038 | 79 | 42 | 1 | 47 | 125 | 117 | 192 | 1.24e-14 | 72.0 |
MS.gene86591.t1 | MTR_8g022820 | 43.038 | 79 | 42 | 1 | 47 | 125 | 116 | 191 | 1.28e-14 | 72.0 |
MS.gene86591.t1 | MTR_4g086165 | 58.929 | 56 | 23 | 0 | 54 | 109 | 82 | 137 | 1.51e-14 | 70.1 |
MS.gene86591.t1 | MTR_4g114570 | 52.174 | 69 | 26 | 1 | 54 | 122 | 7 | 68 | 1.68e-14 | 70.1 |
MS.gene86591.t1 | MTR_0939s0010 | 58.929 | 56 | 23 | 0 | 54 | 109 | 65 | 120 | 2.41e-14 | 69.3 |
MS.gene86591.t1 | MTR_5g016750 | 55.357 | 56 | 25 | 0 | 54 | 109 | 25 | 80 | 3.02e-14 | 68.6 |
MS.gene86591.t1 | MTR_4g010640 | 57.143 | 56 | 24 | 0 | 54 | 109 | 7 | 62 | 3.27e-14 | 68.9 |
MS.gene86591.t1 | MTR_7g092190 | 58.929 | 56 | 23 | 0 | 54 | 109 | 30 | 85 | 3.61e-14 | 70.1 |
MS.gene86591.t1 | MTR_3g106290 | 60.714 | 56 | 22 | 0 | 54 | 109 | 8 | 63 | 4.04e-14 | 68.6 |
MS.gene86591.t1 | MTR_1g074310 | 57.895 | 57 | 23 | 1 | 54 | 109 | 21 | 77 | 5.89e-14 | 67.0 |
MS.gene86591.t1 | MTR_4g008860 | 60.714 | 56 | 22 | 0 | 54 | 109 | 8 | 63 | 6.16e-14 | 68.2 |
MS.gene86591.t1 | MTR_2g103700 | 53.333 | 60 | 28 | 0 | 54 | 113 | 7 | 66 | 6.62e-14 | 67.4 |
MS.gene86591.t1 | MTR_5g009620 | 50.667 | 75 | 27 | 2 | 41 | 109 | 97 | 167 | 8.85e-14 | 69.3 |
MS.gene86591.t1 | MTR_2g438180 | 54.839 | 62 | 27 | 1 | 54 | 114 | 14 | 75 | 9.35e-14 | 66.2 |
MS.gene86591.t1 | MTR_4g078710 | 41.379 | 87 | 43 | 1 | 54 | 140 | 28 | 106 | 1.31e-13 | 67.4 |
MS.gene86591.t1 | MTR_2g015050 | 43.333 | 90 | 46 | 2 | 25 | 109 | 101 | 190 | 1.36e-13 | 68.2 |
MS.gene86591.t1 | MTR_2g014340 | 55.357 | 56 | 25 | 0 | 54 | 109 | 19 | 74 | 2.06e-13 | 66.6 |
MS.gene86591.t1 | MTR_1g048610 | 56.140 | 57 | 24 | 1 | 54 | 109 | 89 | 145 | 2.12e-13 | 67.0 |
MS.gene86591.t1 | MTR_8g099215 | 46.250 | 80 | 37 | 1 | 36 | 109 | 83 | 162 | 2.28e-13 | 68.2 |
MS.gene86591.t1 | MTR_2g043040 | 38.889 | 90 | 55 | 0 | 53 | 142 | 18 | 107 | 2.61e-13 | 67.0 |
MS.gene86591.t1 | MTR_1g070070 | 56.140 | 57 | 24 | 1 | 54 | 109 | 21 | 77 | 3.10e-13 | 65.1 |
MS.gene86591.t1 | MTR_3g090760 | 40.625 | 96 | 48 | 1 | 28 | 123 | 96 | 182 | 4.99e-13 | 67.4 |
MS.gene86591.t1 | MTR_4g100450 | 35.833 | 120 | 67 | 2 | 4 | 113 | 95 | 214 | 5.44e-13 | 67.0 |
MS.gene86591.t1 | MTR_1g074230 | 57.895 | 57 | 23 | 1 | 54 | 109 | 19 | 75 | 6.55e-13 | 63.9 |
MS.gene86591.t1 | MTR_2g014300 | 57.143 | 56 | 24 | 0 | 54 | 109 | 15 | 70 | 9.22e-13 | 64.3 |
MS.gene86591.t1 | MTR_4g054360 | 50.000 | 68 | 33 | 1 | 47 | 113 | 117 | 184 | 1.27e-12 | 65.5 |
MS.gene86591.t1 | MTR_4g100420 | 52.239 | 67 | 29 | 2 | 48 | 113 | 153 | 217 | 1.53e-12 | 65.5 |
MS.gene86591.t1 | MTR_8g069360 | 53.571 | 56 | 26 | 0 | 54 | 109 | 44 | 99 | 1.53e-12 | 66.2 |
MS.gene86591.t1 | MTR_4g054740 | 38.542 | 96 | 52 | 2 | 46 | 140 | 89 | 178 | 2.86e-12 | 64.3 |
MS.gene86591.t1 | MTR_2g016730 | 52.542 | 59 | 28 | 0 | 51 | 109 | 20 | 78 | 3.28e-12 | 64.7 |
MS.gene86591.t1 | MTR_5g085100 | 44.186 | 86 | 38 | 2 | 34 | 119 | 29 | 104 | 3.61e-12 | 64.3 |
MS.gene86591.t1 | MTR_7g085810 | 45.946 | 74 | 39 | 1 | 54 | 127 | 30 | 102 | 4.29e-12 | 63.9 |
MS.gene86591.t1 | MTR_5g008790 | 36.538 | 104 | 49 | 2 | 54 | 157 | 18 | 104 | 4.32e-12 | 62.4 |
MS.gene86591.t1 | MTR_4g088005 | 50.000 | 64 | 31 | 1 | 47 | 109 | 50 | 113 | 4.76e-12 | 61.2 |
MS.gene86591.t1 | MTR_5g032820 | 55.357 | 56 | 25 | 0 | 54 | 109 | 46 | 101 | 4.81e-12 | 64.7 |
MS.gene86591.t1 | MTR_7g081805 | 37.391 | 115 | 63 | 4 | 3 | 109 | 4 | 117 | 4.85e-12 | 63.2 |
MS.gene86591.t1 | MTR_5g008540 | 47.541 | 61 | 32 | 0 | 56 | 116 | 26 | 86 | 5.09e-12 | 60.5 |
MS.gene86591.t1 | MTR_4g111915 | 47.458 | 59 | 31 | 0 | 54 | 112 | 53 | 111 | 5.49e-12 | 61.6 |
MS.gene86591.t1 | MTR_2g043020 | 50.877 | 57 | 28 | 0 | 53 | 109 | 18 | 74 | 6.62e-12 | 62.8 |
MS.gene86591.t1 | MTR_1g090290 | 51.613 | 62 | 27 | 2 | 49 | 109 | 110 | 169 | 6.91e-12 | 62.4 |
MS.gene86591.t1 | MTR_3g072610 | 41.667 | 108 | 59 | 2 | 35 | 138 | 6 | 113 | 6.97e-12 | 62.8 |
MS.gene86591.t1 | MTR_7g011630 | 37.037 | 108 | 53 | 2 | 16 | 123 | 13 | 105 | 8.98e-12 | 63.9 |
MS.gene86591.t1 | MTR_5g085070 | 49.315 | 73 | 27 | 2 | 47 | 119 | 47 | 109 | 1.15e-11 | 63.2 |
MS.gene86591.t1 | MTR_1g074250 | 50.820 | 61 | 28 | 1 | 51 | 109 | 16 | 76 | 1.28e-11 | 60.5 |
MS.gene86591.t1 | MTR_5g075570 | 48.333 | 60 | 31 | 0 | 50 | 109 | 120 | 179 | 1.52e-11 | 62.8 |
MS.gene86591.t1 | MTR_6g041970 | 38.889 | 90 | 42 | 1 | 54 | 143 | 18 | 94 | 1.54e-11 | 59.3 |
MS.gene86591.t1 | MTR_2g019750 | 33.065 | 124 | 74 | 2 | 39 | 162 | 37 | 151 | 1.67e-11 | 62.8 |
MS.gene86591.t1 | MTR_8g032610 | 29.560 | 159 | 96 | 2 | 56 | 210 | 29 | 175 | 1.93e-11 | 62.4 |
MS.gene86591.t1 | MTR_4g054860 | 45.070 | 71 | 38 | 1 | 46 | 115 | 123 | 193 | 1.97e-11 | 62.4 |
MS.gene86591.t1 | MTR_4g112490 | 47.458 | 59 | 31 | 0 | 54 | 112 | 53 | 111 | 1.97e-11 | 61.2 |
MS.gene86591.t1 | MTR_8g006840 | 52.632 | 57 | 26 | 1 | 54 | 109 | 125 | 181 | 2.57e-11 | 60.8 |
MS.gene86591.t1 | MTR_4g119270 | 44.444 | 72 | 37 | 1 | 38 | 109 | 40 | 108 | 2.86e-11 | 62.0 |
MS.gene86591.t1 | MTR_3g095190 | 38.168 | 131 | 62 | 2 | 14 | 125 | 112 | 242 | 3.01e-11 | 62.0 |
MS.gene86591.t1 | MTR_7g084370 | 53.571 | 56 | 26 | 0 | 54 | 109 | 42 | 97 | 3.55e-11 | 61.6 |
MS.gene86591.t1 | MTR_8g085960 | 39.080 | 87 | 49 | 2 | 38 | 124 | 10 | 92 | 3.59e-11 | 61.2 |
MS.gene86591.t1 | MTR_2g015040 | 52.632 | 57 | 26 | 1 | 54 | 109 | 63 | 119 | 3.95e-11 | 59.7 |
MS.gene86591.t1 | MTR_4g100380 | 54.386 | 57 | 25 | 1 | 54 | 109 | 145 | 201 | 6.11e-11 | 60.8 |
MS.gene86591.t1 | MTR_6g012970 | 47.143 | 70 | 37 | 0 | 54 | 123 | 38 | 107 | 6.61e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86591.t1 | AT4G25470 | 50.000 | 220 | 97 | 4 | 5 | 216 | 2 | 216 | 4.32e-65 | 201 |
MS.gene86591.t1 | AT5G51990 | 51.185 | 211 | 82 | 4 | 19 | 216 | 20 | 222 | 3.97e-61 | 191 |
MS.gene86591.t1 | AT4G25480 | 50.909 | 220 | 95 | 5 | 5 | 216 | 2 | 216 | 1.17e-60 | 189 |
MS.gene86591.t1 | AT4G25490 | 51.152 | 217 | 90 | 6 | 10 | 216 | 3 | 213 | 7.62e-58 | 182 |
MS.gene86591.t1 | AT1G12610 | 67.544 | 114 | 37 | 0 | 27 | 140 | 3 | 116 | 6.30e-55 | 174 |
MS.gene86591.t1 | AT1G63030 | 46.316 | 190 | 91 | 2 | 27 | 216 | 3 | 181 | 1.01e-54 | 173 |
MS.gene86591.t1 | AT1G63030 | 46.316 | 190 | 91 | 2 | 27 | 216 | 3 | 181 | 1.01e-54 | 173 |
MS.gene86591.t1 | AT5G25810 | 55.556 | 108 | 45 | 1 | 28 | 135 | 13 | 117 | 2.50e-33 | 119 |
MS.gene86591.t1 | AT5G11590 | 55.263 | 114 | 47 | 1 | 26 | 135 | 19 | 132 | 7.95e-33 | 119 |
MS.gene86591.t1 | AT2G44940 | 61.290 | 93 | 36 | 0 | 43 | 135 | 89 | 181 | 1.39e-31 | 117 |
MS.gene86591.t1 | AT4G32800 | 58.163 | 98 | 35 | 1 | 50 | 141 | 15 | 112 | 1.97e-31 | 114 |
MS.gene86591.t1 | AT1G01250 | 61.250 | 80 | 31 | 0 | 49 | 128 | 40 | 119 | 7.43e-29 | 107 |
MS.gene86591.t1 | AT2G35700 | 45.588 | 136 | 71 | 1 | 49 | 184 | 40 | 172 | 1.01e-28 | 107 |
MS.gene86591.t1 | AT4G16750 | 49.558 | 113 | 52 | 1 | 22 | 129 | 3 | 115 | 3.80e-28 | 105 |
MS.gene86591.t1 | AT3G16280 | 62.025 | 79 | 30 | 0 | 50 | 128 | 57 | 135 | 6.18e-28 | 106 |
MS.gene86591.t1 | AT2G36450 | 37.989 | 179 | 93 | 5 | 50 | 216 | 11 | 183 | 9.55e-28 | 104 |
MS.gene86591.t1 | AT3G16280 | 62.025 | 79 | 30 | 0 | 50 | 128 | 75 | 153 | 9.75e-28 | 105 |
MS.gene86591.t1 | AT3G60490 | 54.945 | 91 | 40 | 1 | 39 | 128 | 55 | 145 | 2.51e-26 | 102 |
MS.gene86591.t1 | AT2G25820 | 61.842 | 76 | 29 | 0 | 53 | 128 | 25 | 100 | 2.47e-25 | 99.0 |
MS.gene86591.t1 | AT5G52020 | 39.655 | 174 | 95 | 4 | 50 | 216 | 61 | 231 | 6.04e-24 | 95.5 |
MS.gene86591.t1 | AT1G71450 | 58.537 | 82 | 34 | 0 | 53 | 134 | 23 | 104 | 1.34e-23 | 93.6 |
MS.gene86591.t1 | AT4G13620 | 52.564 | 78 | 36 | 1 | 35 | 111 | 212 | 289 | 2.36e-19 | 85.5 |
MS.gene86591.t1 | AT1G33760 | 56.322 | 87 | 38 | 0 | 54 | 140 | 20 | 106 | 2.82e-19 | 82.0 |
MS.gene86591.t1 | AT2G47520 | 55.556 | 63 | 28 | 0 | 47 | 109 | 43 | 105 | 4.90e-19 | 81.3 |
MS.gene86591.t1 | AT1G77200 | 59.740 | 77 | 31 | 0 | 52 | 128 | 41 | 117 | 6.46e-19 | 82.4 |
MS.gene86591.t1 | AT1G22190 | 54.795 | 73 | 31 | 1 | 39 | 111 | 70 | 140 | 2.93e-18 | 80.9 |
MS.gene86591.t1 | AT1G21910 | 47.826 | 92 | 41 | 1 | 54 | 138 | 50 | 141 | 3.66e-18 | 80.1 |
MS.gene86591.t1 | AT5G21960 | 47.619 | 84 | 44 | 0 | 52 | 135 | 5 | 88 | 6.27e-18 | 79.3 |
MS.gene86591.t1 | AT4G39780 | 59.016 | 61 | 25 | 0 | 49 | 109 | 88 | 148 | 7.28e-18 | 80.1 |
MS.gene86591.t1 | AT2G22200 | 48.780 | 82 | 42 | 0 | 53 | 134 | 70 | 151 | 1.63e-17 | 79.0 |
MS.gene86591.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 49 | 111 | 27 | 88 | 1.84e-17 | 76.3 |
MS.gene86591.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 49 | 111 | 27 | 88 | 1.87e-17 | 76.6 |
MS.gene86591.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 49 | 111 | 27 | 88 | 1.87e-17 | 76.6 |
MS.gene86591.t1 | AT3G16770 | 45.455 | 99 | 50 | 2 | 17 | 111 | 38 | 136 | 3.32e-17 | 77.8 |
MS.gene86591.t1 | AT3G11020 | 57.576 | 66 | 28 | 0 | 48 | 113 | 72 | 137 | 3.72e-17 | 79.0 |
MS.gene86591.t1 | AT1G74930 | 43.023 | 86 | 49 | 0 | 54 | 139 | 21 | 106 | 5.53e-17 | 76.3 |
MS.gene86591.t1 | AT1G12630 | 43.243 | 148 | 71 | 3 | 50 | 185 | 15 | 161 | 7.27e-17 | 75.9 |
MS.gene86591.t1 | AT4G06746 | 53.226 | 62 | 29 | 0 | 54 | 115 | 36 | 97 | 1.12e-16 | 74.3 |
MS.gene86591.t1 | AT5G65130 | 40.000 | 120 | 58 | 3 | 7 | 113 | 52 | 170 | 1.17e-16 | 77.0 |
MS.gene86591.t1 | AT5G65130 | 40.000 | 120 | 58 | 3 | 7 | 113 | 54 | 172 | 1.23e-16 | 77.0 |
MS.gene86591.t1 | AT1G78080 | 59.322 | 59 | 24 | 0 | 53 | 111 | 151 | 209 | 1.84e-16 | 77.0 |
MS.gene86591.t1 | AT4G28140 | 37.405 | 131 | 62 | 3 | 53 | 183 | 142 | 252 | 2.13e-16 | 76.3 |
MS.gene86591.t1 | AT1G19210 | 30.811 | 185 | 95 | 5 | 54 | 216 | 12 | 185 | 2.20e-16 | 74.3 |
MS.gene86591.t1 | AT2G20880 | 48.780 | 82 | 40 | 1 | 30 | 111 | 165 | 244 | 3.01e-16 | 76.3 |
MS.gene86591.t1 | AT2G33710 | 49.367 | 79 | 35 | 1 | 49 | 122 | 65 | 143 | 3.95e-16 | 74.3 |
MS.gene86591.t1 | AT1G71520 | 36.090 | 133 | 69 | 4 | 48 | 174 | 8 | 130 | 4.17e-16 | 72.8 |
MS.gene86591.t1 | AT5G67190 | 41.748 | 103 | 53 | 2 | 54 | 152 | 21 | 120 | 5.27e-16 | 73.6 |
MS.gene86591.t1 | AT2G33710 | 49.367 | 79 | 35 | 1 | 49 | 122 | 65 | 143 | 6.04e-16 | 74.3 |
MS.gene86591.t1 | AT1G36060 | 61.404 | 57 | 22 | 0 | 53 | 109 | 142 | 198 | 8.13e-16 | 75.1 |
MS.gene86591.t1 | AT3G50260 | 37.273 | 110 | 57 | 2 | 47 | 156 | 14 | 111 | 8.65e-16 | 72.0 |
MS.gene86591.t1 | AT4G36900 | 55.000 | 60 | 27 | 0 | 50 | 109 | 26 | 85 | 1.24e-15 | 72.8 |
MS.gene86591.t1 | AT1G22810 | 41.935 | 93 | 39 | 2 | 54 | 138 | 14 | 99 | 1.48e-15 | 71.2 |
MS.gene86591.t1 | AT5G05410 | 59.322 | 59 | 24 | 0 | 54 | 112 | 79 | 137 | 2.04e-15 | 73.9 |
MS.gene86591.t1 | AT5G05410 | 60.714 | 56 | 22 | 0 | 54 | 109 | 79 | 134 | 2.39e-15 | 73.9 |
MS.gene86591.t1 | AT2G23340 | 57.143 | 56 | 24 | 0 | 54 | 109 | 28 | 83 | 3.57e-15 | 70.9 |
MS.gene86591.t1 | AT4G31060 | 44.828 | 87 | 45 | 2 | 54 | 137 | 27 | 113 | 5.78e-15 | 70.5 |
MS.gene86591.t1 | AT5G13330 | 53.125 | 64 | 28 | 1 | 50 | 113 | 37 | 98 | 9.21e-15 | 70.5 |
MS.gene86591.t1 | AT5G61890 | 53.125 | 64 | 28 | 1 | 50 | 113 | 88 | 149 | 1.14e-14 | 70.9 |
MS.gene86591.t1 | AT5G44210 | 50.000 | 70 | 28 | 1 | 54 | 123 | 33 | 95 | 1.25e-14 | 70.1 |
MS.gene86591.t1 | AT3G15210 | 57.143 | 63 | 24 | 1 | 47 | 109 | 21 | 80 | 1.36e-14 | 70.5 |
MS.gene86591.t1 | AT4G11140 | 33.607 | 122 | 68 | 2 | 54 | 168 | 87 | 202 | 1.40e-14 | 71.2 |
MS.gene86591.t1 | AT1G15360 | 58.929 | 56 | 23 | 0 | 54 | 109 | 7 | 62 | 1.49e-14 | 69.7 |
MS.gene86591.t1 | AT1G15360 | 58.929 | 56 | 23 | 0 | 54 | 109 | 7 | 62 | 1.49e-14 | 69.7 |
MS.gene86591.t1 | AT1G72360 | 37.209 | 129 | 66 | 3 | 6 | 132 | 28 | 143 | 1.85e-14 | 70.5 |
MS.gene86591.t1 | AT5G07580 | 49.367 | 79 | 37 | 2 | 48 | 125 | 106 | 182 | 2.11e-14 | 69.7 |
MS.gene86591.t1 | AT3G57600 | 57.143 | 56 | 24 | 0 | 54 | 109 | 28 | 83 | 3.41e-14 | 70.1 |
MS.gene86591.t1 | AT1G75490 | 50.000 | 70 | 35 | 0 | 53 | 122 | 41 | 110 | 3.87e-14 | 68.9 |
MS.gene86591.t1 | AT4G27950 | 56.140 | 57 | 25 | 0 | 54 | 110 | 118 | 174 | 3.92e-14 | 70.5 |
MS.gene86591.t1 | AT5G61600 | 59.016 | 61 | 22 | 2 | 50 | 109 | 86 | 144 | 4.38e-14 | 69.3 |
MS.gene86591.t1 | AT5G25390 | 55.357 | 56 | 25 | 0 | 54 | 109 | 7 | 62 | 5.58e-14 | 68.2 |
MS.gene86591.t1 | AT5G47230 | 45.679 | 81 | 42 | 2 | 30 | 109 | 133 | 212 | 6.03e-14 | 69.7 |
MS.gene86591.t1 | AT5G43410 | 49.296 | 71 | 33 | 2 | 40 | 109 | 3 | 71 | 6.30e-14 | 66.6 |
MS.gene86591.t1 | AT1G72360 | 43.023 | 86 | 40 | 1 | 47 | 132 | 18 | 94 | 6.76e-14 | 68.2 |
MS.gene86591.t1 | AT3G61630 | 48.000 | 75 | 33 | 1 | 54 | 128 | 105 | 173 | 7.35e-14 | 69.7 |
MS.gene86591.t1 | AT4G17490 | 41.748 | 103 | 53 | 4 | 12 | 109 | 93 | 193 | 8.31e-14 | 68.9 |
MS.gene86591.t1 | AT5G51190 | 55.556 | 63 | 25 | 2 | 48 | 109 | 68 | 128 | 1.12e-13 | 67.8 |
MS.gene86591.t1 | AT1G72360 | 35.938 | 128 | 71 | 3 | 6 | 132 | 28 | 145 | 1.25e-13 | 68.2 |
MS.gene86591.t1 | AT1G12890 | 47.436 | 78 | 38 | 1 | 32 | 109 | 2 | 76 | 1.65e-13 | 67.4 |
MS.gene86591.t1 | AT5G53290 | 42.529 | 87 | 49 | 1 | 24 | 110 | 96 | 181 | 2.03e-13 | 68.6 |
MS.gene86591.t1 | AT2G40340 | 33.582 | 134 | 76 | 3 | 54 | 174 | 14 | 147 | 2.17e-13 | 67.8 |
MS.gene86591.t1 | AT2G40340 | 33.582 | 134 | 76 | 3 | 54 | 174 | 14 | 147 | 2.17e-13 | 67.8 |
MS.gene86591.t1 | AT2G40340 | 33.582 | 134 | 76 | 3 | 54 | 174 | 14 | 147 | 2.17e-13 | 67.8 |
MS.gene86591.t1 | AT5G25190 | 58.929 | 56 | 23 | 0 | 54 | 109 | 8 | 63 | 3.00e-13 | 65.9 |
MS.gene86591.t1 | AT3G23230 | 51.613 | 62 | 29 | 1 | 54 | 114 | 20 | 81 | 3.62e-13 | 64.7 |
MS.gene86591.t1 | AT2G40340 | 33.582 | 134 | 76 | 3 | 54 | 174 | 79 | 212 | 4.32e-13 | 67.4 |
MS.gene86591.t1 | AT2G40340 | 33.582 | 134 | 76 | 3 | 54 | 174 | 72 | 205 | 5.33e-13 | 67.4 |
MS.gene86591.t1 | AT1G03800 | 48.529 | 68 | 32 | 1 | 42 | 109 | 44 | 108 | 7.71e-13 | 65.9 |
MS.gene86591.t1 | AT5G18450 | 56.140 | 57 | 25 | 0 | 53 | 109 | 33 | 89 | 1.41e-12 | 65.9 |
MS.gene86591.t1 | AT3G20310 | 52.459 | 61 | 29 | 0 | 49 | 109 | 22 | 82 | 1.49e-12 | 65.1 |
MS.gene86591.t1 | AT2G46310 | 51.786 | 56 | 27 | 0 | 54 | 109 | 99 | 154 | 1.99e-12 | 65.5 |
MS.gene86591.t1 | AT1G28370 | 53.571 | 56 | 26 | 0 | 54 | 109 | 20 | 75 | 2.36e-12 | 63.2 |
MS.gene86591.t1 | AT1G28360 | 57.143 | 56 | 24 | 0 | 54 | 109 | 12 | 67 | 2.41e-12 | 63.5 |
MS.gene86591.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 72 | 127 | 2.66e-12 | 65.1 |
MS.gene86591.t1 | AT1G28370 | 53.571 | 56 | 26 | 0 | 54 | 109 | 58 | 113 | 3.14e-12 | 63.5 |
MS.gene86591.t1 | AT5G19790 | 53.448 | 58 | 27 | 0 | 54 | 111 | 22 | 79 | 3.22e-12 | 64.3 |
MS.gene86591.t1 | AT4G23750 | 50.877 | 57 | 28 | 0 | 54 | 110 | 122 | 178 | 6.55e-12 | 63.9 |
MS.gene86591.t1 | AT4G23750 | 50.877 | 57 | 28 | 0 | 54 | 110 | 122 | 178 | 6.55e-12 | 63.9 |
MS.gene86591.t1 | AT5G47220 | 54.386 | 57 | 25 | 1 | 54 | 109 | 117 | 173 | 7.01e-12 | 63.2 |
MS.gene86591.t1 | AT1G24590 | 48.571 | 70 | 31 | 1 | 54 | 123 | 58 | 122 | 8.53e-12 | 63.5 |
MS.gene86591.t1 | AT1G50640 | 55.357 | 56 | 25 | 0 | 54 | 109 | 28 | 83 | 8.93e-12 | 62.8 |
MS.gene86591.t1 | AT5G13910 | 45.946 | 74 | 36 | 1 | 54 | 127 | 20 | 89 | 1.14e-11 | 62.0 |
MS.gene86591.t1 | AT1G12980 | 55.357 | 56 | 25 | 0 | 54 | 109 | 57 | 112 | 1.20e-11 | 63.2 |
MS.gene86591.t1 | AT5G64750 | 44.286 | 70 | 38 | 1 | 64 | 133 | 195 | 263 | 1.25e-11 | 63.5 |
MS.gene86591.t1 | AT1G77640 | 46.667 | 90 | 42 | 1 | 54 | 137 | 43 | 132 | 3.35e-11 | 61.2 |
MS.gene86591.t1 | AT5G18560 | 45.070 | 71 | 38 | 1 | 39 | 109 | 41 | 110 | 3.38e-11 | 62.0 |
MS.gene86591.t1 | AT4G17500 | 54.386 | 57 | 25 | 1 | 54 | 109 | 148 | 204 | 4.21e-11 | 61.2 |
MS.gene86591.t1 | AT1G28160 | 52.542 | 59 | 28 | 0 | 54 | 112 | 39 | 97 | 4.32e-11 | 60.8 |
MS.gene86591.t1 | AT5G25390 | 51.786 | 56 | 24 | 1 | 54 | 109 | 7 | 59 | 4.75e-11 | 60.1 |
Find 59 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCTCCCTGCTCGCTTCTT+CGG | 0.269830 | 6.1:-51174837 | None:intergenic |
TCCTCCCTGCTCGCTTCTTC+GGG | 0.291841 | 6.1:-51174836 | None:intergenic |
AAGATGATGAGGTATCATTA+TGG | 0.358006 | 6.1:+51175348 | MS.gene86591:CDS |
TGAGTAAATGGAGTGTGAAT+AGG | 0.371267 | 6.1:-51174751 | None:intergenic |
AAACATATTTAGCTCCTTTG+TGG | 0.389557 | 6.1:-51175198 | None:intergenic |
GCCTGAGTTGTGGAGGAATA+TGG | 0.395635 | 6.1:+51175259 | MS.gene86591:CDS |
GCTAACCGCACCTCAGAATT+CGG | 0.412377 | 6.1:-51174804 | None:intergenic |
GTGGGCACGGGCTGCCATCT+CGG | 0.418086 | 6.1:-51174985 | None:intergenic |
ATCGAGGAAGTTGCTGGAAT+AGG | 0.421748 | 6.1:-51175077 | None:intergenic |
CCAACACGAAAACTAGGATT+TGG | 0.430685 | 6.1:+51174943 | MS.gene86591:CDS |
CGGGCTGCCATCTCGGCTGT+TGG | 0.444907 | 6.1:-51174978 | None:intergenic |
GGAAGAGGAACTTAGACAAA+TGG | 0.456512 | 6.1:+51174901 | MS.gene86591:CDS |
AGCAACCCGAAGAAGCGAGC+AGG | 0.462777 | 6.1:+51174831 | MS.gene86591:CDS |
TGTAGCCGCAATGGCATTGA+GGG | 0.465705 | 6.1:+51175010 | MS.gene86591:CDS |
TTGCGGCTACATCGTGGGCA+CGG | 0.469329 | 6.1:-51174998 | None:intergenic |
CTAGTCATTAAAGTATTGTC+TGG | 0.470750 | 6.1:-51175146 | None:intergenic |
TGTATAGAGGTGTGAGGAAG+AGG | 0.474025 | 6.1:+51174886 | MS.gene86591:CDS |
CTCGATAAAAGATATTCAAA+AGG | 0.494713 | 6.1:+51175094 | MS.gene86591:CDS |
ATTCGGTGATGATGCGTCGA+AGG | 0.497022 | 6.1:-51174787 | None:intergenic |
ACTCGCCACCCGGTGTATAG+AGG | 0.498536 | 6.1:+51174873 | MS.gene86591:CDS |
ATTGTCTGGTCTAAAAGCTT+CGG | 0.510777 | 6.1:-51175132 | None:intergenic |
TGCGGCTACATCGTGGGCAC+GGG | 0.512852 | 6.1:-51174997 | None:intergenic |
CTGTCTCAATTTCGCAGACT+CGG | 0.516981 | 6.1:+51175043 | MS.gene86591:CDS |
GGGAGCCCAACACGAAAACT+AGG | 0.519478 | 6.1:+51174937 | MS.gene86591:CDS |
ATTTAGCTCCTTTGTGGCGA+CGG | 0.521039 | 6.1:-51175192 | None:intergenic |
GCCATATTCCTCCACAACTC+AGG | 0.526273 | 6.1:-51175260 | None:intergenic |
GCAACCCGAAGAAGCGAGCA+GGG | 0.528945 | 6.1:+51174832 | MS.gene86591:CDS |
TTCGGTGATGATGCGTCGAA+GGG | 0.542942 | 6.1:-51174786 | None:intergenic |
GTCTGGTCTAAAAGCTTCGG+CGG | 0.543707 | 6.1:-51175129 | None:intergenic |
GAAGAGGAACTTAGACAAAT+GGG | 0.551458 | 6.1:+51174902 | MS.gene86591:CDS |
TGATACTCAAAGCTATGTGT+GGG | 0.551483 | 6.1:-51175293 | None:intergenic |
ATGTAGCCGCAATGGCATTG+AGG | 0.559262 | 6.1:+51175009 | MS.gene86591:CDS |
TGCCATTGCGGCTACATCGT+GGG | 0.566254 | 6.1:-51175003 | None:intergenic |
CAAATGGGTGTGTGAAATGA+GGG | 0.573881 | 6.1:+51174917 | MS.gene86591:CDS |
TGCCCACGATGTAGCCGCAA+TGG | 0.578037 | 6.1:+51175001 | MS.gene86591:CDS |
TTCCTCACACCTCTATACAC+CGG | 0.578151 | 6.1:-51174882 | None:intergenic |
ATGATACTCAAAGCTATGTG+TGG | 0.579353 | 6.1:-51175294 | None:intergenic |
TCCTCACACCTCTATACACC+GGG | 0.580421 | 6.1:-51174881 | None:intergenic |
CGCATCATCACCGAATTCTG+AGG | 0.580599 | 6.1:+51174794 | MS.gene86591:CDS |
CGAGTCTGCGAAATTGAGAC+AGG | 0.581266 | 6.1:-51175042 | None:intergenic |
TGCAGCTGCCGTCGCCACAA+AGG | 0.581775 | 6.1:+51175184 | MS.gene86591:CDS |
AGCAGGGAGGAAGATATTCA+AGG | 0.582130 | 6.1:+51174848 | MS.gene86591:CDS |
ACAAATGGGTGTGTGAAATG+AGG | 0.584388 | 6.1:+51174916 | MS.gene86591:CDS |
ACGAAAACTAGGATTTGGCT+AGG | 0.596956 | 6.1:+51174948 | MS.gene86591:CDS |
ATTCAAGGAAACTCGCCACC+CGG | 0.604485 | 6.1:+51174863 | MS.gene86591:CDS |
AGGAAGTTGCTGGAATAGGA+AGG | 0.611487 | 6.1:-51175073 | None:intergenic |
TGTTGAATATGCCTGAGTTG+TGG | 0.615732 | 6.1:+51175249 | MS.gene86591:CDS |
ATGCCATTGCGGCTACATCG+TGG | 0.634571 | 6.1:-51175004 | None:intergenic |
TCAATTTCGCAGACTCGGTG+TGG | 0.646164 | 6.1:+51175048 | MS.gene86591:CDS |
GCGGCCCCTCAATGCCATTG+CGG | 0.656772 | 6.1:-51175015 | None:intergenic |
ATACTCAAAGCTATGTGTGG+GGG | 0.671474 | 6.1:-51175291 | None:intergenic |
GATACTCAAAGCTATGTGTG+GGG | 0.675772 | 6.1:-51175292 | None:intergenic |
CGAAATTGAGACAGGCGTAG+CGG | 0.680531 | 6.1:-51175034 | None:intergenic |
CATCACCGAATTCTGAGGTG+CGG | 0.682218 | 6.1:+51174799 | MS.gene86591:CDS |
GTAGCCGCAATGGCATTGAG+GGG | 0.688866 | 6.1:+51175011 | MS.gene86591:CDS |
TGAATATGCCTGAGTTGTGG+AGG | 0.690920 | 6.1:+51175252 | MS.gene86591:CDS |
ACCCGAAGAAGCGAGCAGGG+AGG | 0.693278 | 6.1:+51174835 | MS.gene86591:CDS |
ACCCGGTGTATAGAGGTGTG+AGG | 0.705873 | 6.1:+51174880 | MS.gene86591:CDS |
TCACACCTCTATACACCGGG+TGG | 0.726886 | 6.1:-51174878 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGAAAAATCTTTTGAGTAAA+TGG | - | chr6.1:51174766-51174785 | None:intergenic | 20.0% |
! | CTCGATAAAAGATATTCAAA+AGG | + | chr6.1:51175094-51175113 | MS.gene86591:CDS | 25.0% |
!! | CTTTTGAATATCTTTTATCG+AGG | - | chr6.1:51175096-51175115 | None:intergenic | 25.0% |
!!! | AATAGATTTTCAAGATGATG+AGG | + | chr6.1:51175337-51175356 | MS.gene86591:CDS | 25.0% |
! | AAACATATTTAGCTCCTTTG+TGG | - | chr6.1:51175201-51175220 | None:intergenic | 30.0% |
! | AAGATGATGAGGTATCATTA+TGG | + | chr6.1:51175348-51175367 | MS.gene86591:CDS | 30.0% |
!! | CTAGTCATTAAAGTATTGTC+TGG | - | chr6.1:51175149-51175168 | None:intergenic | 30.0% |
ATGATACTCAAAGCTATGTG+TGG | - | chr6.1:51175297-51175316 | None:intergenic | 35.0% | |
ATTGTCTGGTCTAAAAGCTT+CGG | - | chr6.1:51175135-51175154 | None:intergenic | 35.0% | |
GAAGAGGAACTTAGACAAAT+GGG | + | chr6.1:51174902-51174921 | MS.gene86591:CDS | 35.0% | |
TGAGTAAATGGAGTGTGAAT+AGG | - | chr6.1:51174754-51174773 | None:intergenic | 35.0% | |
TGATACTCAAAGCTATGTGT+GGG | - | chr6.1:51175296-51175315 | None:intergenic | 35.0% | |
! | GGAGCTAAATATGTTTTGTG+TGG | + | chr6.1:51175205-51175224 | MS.gene86591:CDS | 35.0% |
!! | CAAATCCTAGTTTTCGTGTT+GGG | - | chr6.1:51174945-51174964 | None:intergenic | 35.0% |
ACAAATGGGTGTGTGAAATG+AGG | + | chr6.1:51174916-51174935 | MS.gene86591:CDS | 40.0% | |
ACGAAAACTAGGATTTGGCT+AGG | + | chr6.1:51174948-51174967 | MS.gene86591:CDS | 40.0% | |
ATACTCAAAGCTATGTGTGG+GGG | - | chr6.1:51175294-51175313 | None:intergenic | 40.0% | |
CAAATGGGTGTGTGAAATGA+GGG | + | chr6.1:51174917-51174936 | MS.gene86591:CDS | 40.0% | |
CCAACACGAAAACTAGGATT+TGG | + | chr6.1:51174943-51174962 | MS.gene86591:CDS | 40.0% | |
GATACTCAAAGCTATGTGTG+GGG | - | chr6.1:51175295-51175314 | None:intergenic | 40.0% | |
GGAAGAGGAACTTAGACAAA+TGG | + | chr6.1:51174901-51174920 | MS.gene86591:CDS | 40.0% | |
TGTTGAATATGCCTGAGTTG+TGG | + | chr6.1:51175249-51175268 | MS.gene86591:CDS | 40.0% | |
! | TCTTTTATCGAGGAAGTTGC+TGG | - | chr6.1:51175086-51175105 | None:intergenic | 40.0% |
!! | CCAAATCCTAGTTTTCGTGT+TGG | - | chr6.1:51174946-51174965 | None:intergenic | 40.0% |
AGCAGGGAGGAAGATATTCA+AGG | + | chr6.1:51174848-51174867 | MS.gene86591:CDS | 45.0% | |
AGGAAGTTGCTGGAATAGGA+AGG | - | chr6.1:51175076-51175095 | None:intergenic | 45.0% | |
ATCGAGGAAGTTGCTGGAAT+AGG | - | chr6.1:51175080-51175099 | None:intergenic | 45.0% | |
CTGTCTCAATTTCGCAGACT+CGG | + | chr6.1:51175043-51175062 | MS.gene86591:CDS | 45.0% | |
TGAATATGCCTGAGTTGTGG+AGG | + | chr6.1:51175252-51175271 | MS.gene86591:CDS | 45.0% | |
TTCCTCACACCTCTATACAC+CGG | - | chr6.1:51174885-51174904 | None:intergenic | 45.0% | |
! | AACTTTTCCAACAGCCGAGA+TGG | + | chr6.1:51174971-51174990 | MS.gene86591:CDS | 45.0% |
! | ATTTAGCTCCTTTGTGGCGA+CGG | - | chr6.1:51175195-51175214 | None:intergenic | 45.0% |
! | TGTATAGAGGTGTGAGGAAG+AGG | + | chr6.1:51174886-51174905 | MS.gene86591:CDS | 45.0% |
ATGTAGCCGCAATGGCATTG+AGG | + | chr6.1:51175009-51175028 | MS.gene86591:CDS | 50.0% | |
ATTCAAGGAAACTCGCCACC+CGG | + | chr6.1:51174863-51174882 | MS.gene86591:CDS | 50.0% | |
CGAAATTGAGACAGGCGTAG+CGG | - | chr6.1:51175037-51175056 | None:intergenic | 50.0% | |
CGAGTCTGCGAAATTGAGAC+AGG | - | chr6.1:51175045-51175064 | None:intergenic | 50.0% | |
CGCATCATCACCGAATTCTG+AGG | + | chr6.1:51174794-51174813 | MS.gene86591:CDS | 50.0% | |
GCCATATTCCTCCACAACTC+AGG | - | chr6.1:51175263-51175282 | None:intergenic | 50.0% | |
GCCTGAGTTGTGGAGGAATA+TGG | + | chr6.1:51175259-51175278 | MS.gene86591:CDS | 50.0% | |
GCTAACCGCACCTCAGAATT+CGG | - | chr6.1:51174807-51174826 | None:intergenic | 50.0% | |
GTCTGGTCTAAAAGCTTCGG+CGG | - | chr6.1:51175132-51175151 | None:intergenic | 50.0% | |
TCCTCACACCTCTATACACC+GGG | - | chr6.1:51174884-51174903 | None:intergenic | 50.0% | |
! | ATTCGGTGATGATGCGTCGA+AGG | - | chr6.1:51174790-51174809 | None:intergenic | 50.0% |
! | TGTAGCCGCAATGGCATTGA+GGG | + | chr6.1:51175010-51175029 | MS.gene86591:CDS | 50.0% |
! | TTCGGTGATGATGCGTCGAA+GGG | - | chr6.1:51174789-51174808 | None:intergenic | 50.0% |
!! | CATCACCGAATTCTGAGGTG+CGG | + | chr6.1:51174799-51174818 | MS.gene86591:CDS | 50.0% |
!! | TCAATTTCGCAGACTCGGTG+TGG | + | chr6.1:51175048-51175067 | MS.gene86591:CDS | 50.0% |
ATGCCATTGCGGCTACATCG+TGG | - | chr6.1:51175007-51175026 | None:intergenic | 55.0% | |
GGGAGCCCAACACGAAAACT+AGG | + | chr6.1:51174937-51174956 | MS.gene86591:CDS | 55.0% | |
TCACACCTCTATACACCGGG+TGG | - | chr6.1:51174881-51174900 | None:intergenic | 55.0% | |
TGCCATTGCGGCTACATCGT+GGG | - | chr6.1:51175006-51175025 | None:intergenic | 55.0% | |
TTCCTCCCTGCTCGCTTCTT+CGG | - | chr6.1:51174840-51174859 | None:intergenic | 55.0% | |
! | ACCCGGTGTATAGAGGTGTG+AGG | + | chr6.1:51174880-51174899 | MS.gene86591:CDS | 55.0% |
! | GTAGCCGCAATGGCATTGAG+GGG | + | chr6.1:51175011-51175030 | MS.gene86591:CDS | 55.0% |
ACTCGCCACCCGGTGTATAG+AGG | + | chr6.1:51174873-51174892 | MS.gene86591:CDS | 60.0% | |
AGCAACCCGAAGAAGCGAGC+AGG | + | chr6.1:51174831-51174850 | MS.gene86591:CDS | 60.0% | |
GCAACCCGAAGAAGCGAGCA+GGG | + | chr6.1:51174832-51174851 | MS.gene86591:CDS | 60.0% | |
TCCTCCCTGCTCGCTTCTTC+GGG | - | chr6.1:51174839-51174858 | None:intergenic | 60.0% | |
TGCCCACGATGTAGCCGCAA+TGG | + | chr6.1:51175001-51175020 | MS.gene86591:CDS | 60.0% | |
TTGCGGCTACATCGTGGGCA+CGG | - | chr6.1:51175001-51175020 | None:intergenic | 60.0% | |
ACCCGAAGAAGCGAGCAGGG+AGG | + | chr6.1:51174835-51174854 | MS.gene86591:CDS | 65.0% | |
GCGGCCCCTCAATGCCATTG+CGG | - | chr6.1:51175018-51175037 | None:intergenic | 65.0% | |
TGCAGCTGCCGTCGCCACAA+AGG | + | chr6.1:51175184-51175203 | MS.gene86591:CDS | 65.0% | |
TGCGGCTACATCGTGGGCAC+GGG | - | chr6.1:51175000-51175019 | None:intergenic | 65.0% | |
CGGGCTGCCATCTCGGCTGT+TGG | - | chr6.1:51174981-51175000 | None:intergenic | 70.0% | |
! | GTGGGCACGGGCTGCCATCT+CGG | - | chr6.1:51174988-51175007 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 51174729 | 51175379 | 51174729 | ID=MS.gene86591 |
chr6.1 | mRNA | 51174729 | 51175379 | 51174729 | ID=MS.gene86591.t1;Parent=MS.gene86591 |
chr6.1 | exon | 51174729 | 51175379 | 51174729 | ID=MS.gene86591.t1.exon1;Parent=MS.gene86591.t1 |
chr6.1 | CDS | 51174729 | 51175379 | 51174729 | ID=cds.MS.gene86591.t1;Parent=MS.gene86591.t1 |
Gene Sequence |
Protein sequence |