Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30853.t1 | AGR40683.1 | 84.3 | 230 | 33 | 2 | 2 | 231 | 1 | 227 | 7.70E-101 | 376.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30853.t1 | Q9M0L0 | 53.2 | 216 | 82 | 5 | 23 | 231 | 13 | 216 | 1.0e-48 | 194.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30853.t1 | S5MAB5 | 84.3 | 230 | 33 | 2 | 2 | 231 | 1 | 227 | 5.5e-101 | 376.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene30853.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30853.t1 | MTR_6g465690 | 87.826 | 230 | 22 | 3 | 2 | 228 | 1 | 227 | 1.45e-140 | 394 |
MS.gene30853.t1 | MTR_6g466000 | 76.279 | 215 | 35 | 3 | 27 | 231 | 19 | 227 | 2.09e-113 | 324 |
MS.gene30853.t1 | MTR_6g465450 | 73.756 | 221 | 48 | 4 | 4 | 223 | 1 | 212 | 5.13e-110 | 316 |
MS.gene30853.t1 | MTR_6g465420 | 75.132 | 189 | 46 | 1 | 35 | 223 | 24 | 211 | 1.42e-104 | 303 |
MS.gene30853.t1 | MTR_6g465460 | 74.603 | 189 | 44 | 2 | 36 | 223 | 25 | 210 | 3.33e-103 | 300 |
MS.gene30853.t1 | MTR_6g465430 | 75.263 | 190 | 44 | 2 | 35 | 223 | 24 | 211 | 2.19e-101 | 294 |
MS.gene30853.t1 | MTR_6g466130 | 75.481 | 208 | 47 | 2 | 24 | 231 | 25 | 228 | 9.09e-101 | 292 |
MS.gene30853.t1 | MTR_6g465530 | 72.222 | 198 | 46 | 3 | 38 | 231 | 6 | 198 | 2.09e-93 | 272 |
MS.gene30853.t1 | MTR_6g465510 | 71.981 | 207 | 41 | 3 | 38 | 231 | 6 | 208 | 1.10e-92 | 271 |
MS.gene30853.t1 | MTR_6g465990 | 65.138 | 218 | 40 | 4 | 24 | 231 | 2 | 193 | 1.51e-84 | 249 |
MS.gene30853.t1 | MTR_6g465850 | 58.730 | 252 | 46 | 5 | 34 | 231 | 32 | 279 | 4.21e-78 | 236 |
MS.gene30853.t1 | MTR_1g101600 | 65.079 | 189 | 59 | 3 | 43 | 231 | 19 | 200 | 1.32e-76 | 230 |
MS.gene30853.t1 | MTR_6g466020 | 54.369 | 206 | 66 | 4 | 24 | 228 | 2 | 180 | 5.41e-67 | 204 |
MS.gene30853.t1 | MTR_5g010930 | 43.981 | 216 | 82 | 7 | 40 | 231 | 24 | 224 | 6.22e-52 | 168 |
MS.gene30853.t1 | MTR_5g010940 | 41.850 | 227 | 109 | 6 | 20 | 231 | 9 | 227 | 2.42e-50 | 164 |
MS.gene30853.t1 | MTR_4g102660 | 49.327 | 223 | 89 | 9 | 22 | 231 | 7 | 218 | 3.93e-50 | 163 |
MS.gene30853.t1 | MTR_5g010910 | 41.778 | 225 | 107 | 7 | 23 | 231 | 6 | 222 | 4.64e-48 | 158 |
MS.gene30853.t1 | MTR_3g110205 | 57.292 | 96 | 41 | 0 | 60 | 155 | 38 | 133 | 4.33e-33 | 118 |
MS.gene30853.t1 | MTR_8g006410 | 65.385 | 78 | 27 | 0 | 62 | 139 | 49 | 126 | 7.66e-32 | 115 |
MS.gene30853.t1 | MTR_7g046260 | 64.198 | 81 | 29 | 0 | 59 | 139 | 55 | 135 | 2.33e-31 | 115 |
MS.gene30853.t1 | MTR_7g117690 | 63.750 | 80 | 29 | 0 | 60 | 139 | 23 | 102 | 5.73e-31 | 112 |
MS.gene30853.t1 | MTR_2g085015 | 40.964 | 166 | 73 | 6 | 59 | 201 | 41 | 204 | 7.99e-31 | 114 |
MS.gene30853.t1 | MTR_5g012910 | 62.025 | 79 | 30 | 0 | 61 | 139 | 24 | 102 | 5.10e-30 | 110 |
MS.gene30853.t1 | MTR_8g013860 | 53.608 | 97 | 44 | 1 | 44 | 139 | 25 | 121 | 7.53e-29 | 108 |
MS.gene30853.t1 | MTR_8g102800 | 53.465 | 101 | 47 | 0 | 55 | 155 | 27 | 127 | 2.65e-28 | 107 |
MS.gene30853.t1 | MTR_2g101340 | 51.485 | 101 | 43 | 2 | 45 | 139 | 15 | 115 | 6.10e-28 | 105 |
MS.gene30853.t1 | MTR_6g088405 | 58.974 | 78 | 32 | 0 | 62 | 139 | 41 | 118 | 2.51e-27 | 104 |
MS.gene30853.t1 | MTR_8g027465 | 52.000 | 100 | 42 | 2 | 43 | 139 | 20 | 116 | 3.23e-27 | 103 |
MS.gene30853.t1 | MTR_4g102670 | 40.000 | 175 | 83 | 6 | 61 | 231 | 11 | 167 | 6.06e-27 | 102 |
MS.gene30853.t1 | MTR_4g100650 | 58.974 | 78 | 32 | 0 | 62 | 139 | 71 | 148 | 2.35e-25 | 100 |
MS.gene30853.t1 | MTR_6g088425 | 48.246 | 114 | 49 | 1 | 43 | 146 | 17 | 130 | 1.00e-23 | 95.5 |
MS.gene30853.t1 | MTR_4g035430 | 47.423 | 97 | 46 | 1 | 50 | 146 | 22 | 113 | 1.62e-22 | 92.0 |
MS.gene30853.t1 | MTR_1g006660 | 59.494 | 79 | 32 | 0 | 61 | 139 | 43 | 121 | 5.88e-22 | 91.3 |
MS.gene30853.t1 | MTR_5g008590 | 36.667 | 180 | 96 | 4 | 65 | 230 | 11 | 186 | 1.28e-19 | 83.6 |
MS.gene30853.t1 | MTR_5g008550 | 46.000 | 100 | 52 | 1 | 65 | 162 | 21 | 120 | 2.75e-19 | 82.8 |
MS.gene30853.t1 | MTR_1g014780 | 36.975 | 119 | 67 | 2 | 64 | 175 | 37 | 154 | 5.93e-18 | 80.1 |
MS.gene30853.t1 | MTR_1g101550 | 37.143 | 175 | 101 | 3 | 65 | 231 | 57 | 230 | 1.33e-17 | 79.0 |
MS.gene30853.t1 | MTR_2g435590 | 37.008 | 127 | 78 | 1 | 9 | 135 | 42 | 166 | 3.04e-17 | 78.6 |
MS.gene30853.t1 | MTR_5g008470 | 44.048 | 84 | 47 | 0 | 67 | 150 | 77 | 160 | 6.14e-17 | 76.3 |
MS.gene30853.t1 | MTR_3g105510 | 44.186 | 86 | 44 | 1 | 65 | 146 | 37 | 122 | 1.58e-16 | 76.3 |
MS.gene30853.t1 | MTR_3g102100 | 58.929 | 56 | 23 | 0 | 65 | 120 | 45 | 100 | 1.61e-16 | 74.7 |
MS.gene30853.t1 | MTR_1g014820 | 42.529 | 87 | 46 | 1 | 64 | 146 | 26 | 112 | 2.76e-16 | 75.9 |
MS.gene30853.t1 | MTR_5g083340 | 58.621 | 58 | 24 | 0 | 65 | 122 | 85 | 142 | 3.46e-16 | 77.0 |
MS.gene30853.t1 | MTR_1g060910 | 35.503 | 169 | 72 | 6 | 49 | 201 | 3 | 150 | 3.92e-16 | 73.9 |
MS.gene30853.t1 | MTR_2g043050 | 44.706 | 85 | 47 | 0 | 64 | 148 | 18 | 102 | 5.60e-16 | 74.3 |
MS.gene30853.t1 | MTR_1g090170 | 42.697 | 89 | 45 | 1 | 60 | 148 | 147 | 229 | 7.17e-16 | 75.5 |
MS.gene30853.t1 | MTR_1g014860 | 34.454 | 119 | 69 | 2 | 60 | 171 | 17 | 133 | 1.17e-15 | 73.6 |
MS.gene30853.t1 | MTR_1g019110 | 43.333 | 90 | 43 | 1 | 65 | 146 | 44 | 133 | 1.44e-15 | 72.4 |
MS.gene30853.t1 | MTR_1g090170 | 42.697 | 89 | 45 | 1 | 60 | 148 | 234 | 316 | 1.50e-15 | 75.1 |
MS.gene30853.t1 | MTR_2g105380 | 42.222 | 90 | 47 | 1 | 53 | 137 | 105 | 194 | 1.57e-15 | 75.1 |
MS.gene30853.t1 | MTR_7g020980 | 53.125 | 64 | 29 | 1 | 58 | 120 | 43 | 106 | 1.79e-15 | 72.0 |
MS.gene30853.t1 | MTR_5g062700 | 55.932 | 59 | 26 | 0 | 64 | 122 | 172 | 230 | 2.22e-15 | 74.7 |
MS.gene30853.t1 | MTR_3g074130 | 57.895 | 57 | 24 | 0 | 64 | 120 | 149 | 205 | 2.27e-15 | 74.3 |
MS.gene30853.t1 | MTR_1g087920 | 35.772 | 123 | 74 | 2 | 12 | 132 | 25 | 144 | 2.50e-15 | 73.9 |
MS.gene30853.t1 | MTR_8g090350 | 46.053 | 76 | 38 | 1 | 64 | 136 | 112 | 187 | 2.61e-15 | 73.6 |
MS.gene30853.t1 | MTR_8g092460 | 55.000 | 60 | 27 | 0 | 65 | 124 | 145 | 204 | 2.87e-15 | 73.9 |
MS.gene30853.t1 | MTR_2g090235 | 55.932 | 59 | 26 | 0 | 64 | 122 | 217 | 275 | 3.62e-15 | 74.3 |
MS.gene30853.t1 | MTR_7g021010 | 53.125 | 64 | 29 | 1 | 58 | 120 | 43 | 106 | 3.84e-15 | 71.2 |
MS.gene30853.t1 | MTR_3g105480 | 44.048 | 84 | 43 | 1 | 67 | 146 | 33 | 116 | 6.19e-15 | 71.6 |
MS.gene30853.t1 | MTR_2g043030 | 40.659 | 91 | 54 | 0 | 64 | 154 | 18 | 108 | 7.89e-15 | 70.9 |
MS.gene30853.t1 | MTR_7g021010 | 51.667 | 60 | 29 | 0 | 61 | 120 | 8 | 67 | 8.60e-15 | 69.3 |
MS.gene30853.t1 | MTR_1g014800 | 51.667 | 60 | 29 | 0 | 64 | 123 | 30 | 89 | 9.33e-15 | 70.9 |
MS.gene30853.t1 | MTR_5g016750 | 55.357 | 56 | 25 | 0 | 65 | 120 | 25 | 80 | 1.00e-14 | 70.1 |
MS.gene30853.t1 | MTR_1g028560 | 41.463 | 82 | 43 | 1 | 65 | 146 | 115 | 191 | 1.01e-14 | 72.4 |
MS.gene30853.t1 | MTR_4g086220 | 57.143 | 56 | 24 | 0 | 65 | 120 | 96 | 151 | 1.01e-14 | 71.2 |
MS.gene30853.t1 | MTR_5g082950 | 58.929 | 56 | 23 | 0 | 65 | 120 | 66 | 121 | 1.67e-14 | 71.6 |
MS.gene30853.t1 | MTR_3g053690 | 55.000 | 60 | 27 | 0 | 61 | 120 | 23 | 82 | 1.94e-14 | 70.1 |
MS.gene30853.t1 | MTR_2g089170 | 57.143 | 56 | 24 | 0 | 65 | 120 | 65 | 120 | 2.05e-14 | 69.3 |
MS.gene30853.t1 | MTR_2g078680 | 57.143 | 56 | 24 | 0 | 65 | 120 | 31 | 86 | 2.39e-14 | 69.7 |
MS.gene30853.t1 | MTR_4g086160 | 55.357 | 56 | 25 | 0 | 65 | 120 | 96 | 151 | 2.69e-14 | 70.1 |
MS.gene30853.t1 | MTR_4g086165 | 42.105 | 95 | 47 | 1 | 26 | 120 | 51 | 137 | 3.08e-14 | 69.3 |
MS.gene30853.t1 | MTR_5g083330 | 47.945 | 73 | 38 | 0 | 50 | 122 | 20 | 92 | 3.43e-14 | 70.5 |
MS.gene30853.t1 | MTR_4g086190 | 55.357 | 56 | 25 | 0 | 65 | 120 | 96 | 151 | 3.79e-14 | 69.7 |
MS.gene30853.t1 | MTR_1g048610 | 37.500 | 104 | 62 | 2 | 18 | 120 | 44 | 145 | 4.50e-14 | 69.3 |
MS.gene30853.t1 | MTR_7g028925 | 53.333 | 60 | 25 | 1 | 64 | 123 | 28 | 84 | 4.86e-14 | 66.2 |
MS.gene30853.t1 | MTR_8g022820 | 41.463 | 82 | 45 | 1 | 55 | 136 | 113 | 191 | 5.86e-14 | 70.5 |
MS.gene30853.t1 | MTR_8g022820 | 41.463 | 82 | 45 | 1 | 55 | 136 | 114 | 192 | 6.05e-14 | 70.5 |
MS.gene30853.t1 | MTR_8g022820 | 41.463 | 82 | 45 | 1 | 55 | 136 | 114 | 192 | 6.05e-14 | 70.5 |
MS.gene30853.t1 | MTR_0939s0010 | 55.357 | 56 | 25 | 0 | 65 | 120 | 65 | 120 | 6.54e-14 | 68.2 |
MS.gene30853.t1 | MTR_7g092190 | 57.143 | 56 | 24 | 0 | 65 | 120 | 30 | 85 | 8.17e-14 | 69.3 |
MS.gene30853.t1 | MTR_1g074310 | 56.140 | 57 | 24 | 1 | 65 | 120 | 21 | 77 | 9.99e-14 | 66.6 |
MS.gene30853.t1 | MTR_2g438180 | 55.932 | 59 | 25 | 1 | 65 | 122 | 14 | 72 | 2.15e-13 | 65.5 |
MS.gene30853.t1 | MTR_2g015050 | 47.826 | 69 | 35 | 1 | 53 | 120 | 122 | 190 | 2.69e-13 | 67.8 |
MS.gene30853.t1 | MTR_5g009620 | 48.000 | 75 | 29 | 2 | 52 | 120 | 97 | 167 | 3.30e-13 | 67.8 |
MS.gene30853.t1 | MTR_4g114570 | 46.479 | 71 | 31 | 1 | 65 | 135 | 7 | 70 | 3.57e-13 | 66.6 |
MS.gene30853.t1 | MTR_4g078710 | 53.571 | 56 | 26 | 0 | 65 | 120 | 28 | 83 | 3.94e-13 | 66.6 |
MS.gene30853.t1 | MTR_3g090760 | 39.560 | 91 | 46 | 1 | 41 | 131 | 98 | 179 | 4.55e-13 | 67.8 |
MS.gene30853.t1 | MTR_3g106290 | 57.143 | 56 | 24 | 0 | 65 | 120 | 8 | 63 | 5.61e-13 | 65.5 |
MS.gene30853.t1 | MTR_4g010640 | 53.571 | 56 | 26 | 0 | 65 | 120 | 7 | 62 | 5.70e-13 | 65.9 |
MS.gene30853.t1 | MTR_4g100450 | 42.169 | 83 | 47 | 1 | 39 | 120 | 128 | 210 | 5.78e-13 | 67.4 |
MS.gene30853.t1 | MTR_1g070070 | 52.632 | 57 | 26 | 1 | 65 | 120 | 21 | 77 | 6.00e-13 | 64.7 |
MS.gene30853.t1 | MTR_2g043020 | 38.710 | 93 | 57 | 0 | 64 | 156 | 18 | 110 | 6.18e-13 | 65.9 |
MS.gene30853.t1 | MTR_2g014340 | 53.571 | 56 | 26 | 0 | 65 | 120 | 19 | 74 | 6.45e-13 | 65.5 |
MS.gene30853.t1 | MTR_4g008860 | 57.143 | 56 | 24 | 0 | 65 | 120 | 8 | 63 | 8.56e-13 | 65.1 |
MS.gene30853.t1 | MTR_2g043040 | 40.000 | 85 | 51 | 0 | 64 | 148 | 18 | 102 | 8.89e-13 | 65.9 |
MS.gene30853.t1 | MTR_1g074230 | 54.386 | 57 | 25 | 1 | 65 | 120 | 19 | 75 | 1.33e-12 | 63.5 |
MS.gene30853.t1 | MTR_2g103700 | 51.786 | 56 | 27 | 0 | 65 | 120 | 7 | 62 | 1.62e-12 | 63.9 |
MS.gene30853.t1 | MTR_2g014300 | 55.357 | 56 | 25 | 0 | 65 | 120 | 15 | 70 | 1.77e-12 | 63.9 |
MS.gene30853.t1 | MTR_3g072610 | 40.741 | 108 | 60 | 2 | 46 | 149 | 6 | 113 | 2.18e-12 | 64.7 |
MS.gene30853.t1 | MTR_1g074250 | 50.820 | 61 | 28 | 1 | 62 | 120 | 16 | 76 | 2.34e-12 | 62.4 |
MS.gene30853.t1 | MTR_4g100420 | 42.169 | 83 | 47 | 1 | 39 | 120 | 131 | 213 | 3.24e-12 | 65.1 |
MS.gene30853.t1 | MTR_2g016730 | 43.590 | 78 | 43 | 1 | 43 | 120 | 2 | 78 | 9.74e-12 | 63.9 |
MS.gene30853.t1 | MTR_5g085100 | 38.679 | 106 | 49 | 3 | 25 | 130 | 15 | 104 | 1.44e-11 | 63.2 |
MS.gene30853.t1 | MTR_1g090290 | 48.387 | 62 | 29 | 2 | 60 | 120 | 110 | 169 | 1.74e-11 | 61.6 |
MS.gene30853.t1 | MTR_5g085070 | 48.485 | 66 | 27 | 1 | 65 | 130 | 51 | 109 | 2.32e-11 | 62.4 |
MS.gene30853.t1 | MTR_6g041970 | 39.560 | 91 | 42 | 1 | 65 | 155 | 18 | 95 | 2.73e-11 | 58.9 |
MS.gene30853.t1 | MTR_8g099215 | 38.710 | 93 | 51 | 1 | 34 | 120 | 70 | 162 | 2.88e-11 | 62.4 |
MS.gene30853.t1 | MTR_4g054360 | 46.154 | 65 | 34 | 1 | 57 | 120 | 116 | 180 | 3.71e-11 | 61.6 |
MS.gene30853.t1 | MTR_4g111915 | 44.068 | 59 | 33 | 0 | 65 | 123 | 53 | 111 | 4.38e-11 | 59.3 |
MS.gene30853.t1 | MTR_8g069360 | 50.000 | 56 | 28 | 0 | 65 | 120 | 44 | 99 | 4.53e-11 | 62.0 |
MS.gene30853.t1 | MTR_5g075570 | 45.000 | 60 | 33 | 0 | 61 | 120 | 120 | 179 | 4.57e-11 | 61.6 |
MS.gene30853.t1 | MTR_4g088005 | 39.000 | 100 | 55 | 3 | 27 | 120 | 14 | 113 | 5.13e-11 | 58.5 |
MS.gene30853.t1 | MTR_6g012970 | 38.202 | 89 | 47 | 1 | 32 | 120 | 13 | 93 | 6.42e-11 | 61.6 |
MS.gene30853.t1 | MTR_5g032820 | 50.877 | 57 | 28 | 0 | 65 | 121 | 46 | 102 | 9.15e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30853.t1 | AT4G25470 | 55.051 | 198 | 72 | 4 | 42 | 231 | 28 | 216 | 1.32e-65 | 202 |
MS.gene30853.t1 | AT4G25480 | 53.704 | 216 | 81 | 5 | 23 | 231 | 13 | 216 | 1.34e-63 | 197 |
MS.gene30853.t1 | AT5G51990 | 53.000 | 200 | 76 | 5 | 42 | 231 | 31 | 222 | 1.09e-62 | 195 |
MS.gene30853.t1 | AT4G25490 | 56.566 | 198 | 67 | 5 | 43 | 231 | 26 | 213 | 3.09e-59 | 186 |
MS.gene30853.t1 | AT1G63030 | 48.980 | 196 | 81 | 4 | 38 | 231 | 3 | 181 | 1.31e-58 | 183 |
MS.gene30853.t1 | AT1G63030 | 48.980 | 196 | 81 | 4 | 38 | 231 | 3 | 181 | 1.31e-58 | 183 |
MS.gene30853.t1 | AT1G12610 | 47.343 | 207 | 94 | 5 | 38 | 231 | 3 | 207 | 3.93e-56 | 178 |
MS.gene30853.t1 | AT5G25810 | 61.628 | 86 | 33 | 0 | 61 | 146 | 32 | 117 | 4.89e-33 | 119 |
MS.gene30853.t1 | AT5G11590 | 49.593 | 123 | 58 | 1 | 28 | 146 | 10 | 132 | 1.96e-32 | 118 |
MS.gene30853.t1 | AT2G44940 | 54.286 | 105 | 48 | 0 | 54 | 158 | 89 | 193 | 3.55e-31 | 116 |
MS.gene30853.t1 | AT4G32800 | 50.467 | 107 | 47 | 1 | 52 | 152 | 6 | 112 | 3.69e-31 | 114 |
MS.gene30853.t1 | AT2G35700 | 45.255 | 137 | 71 | 1 | 60 | 196 | 40 | 172 | 3.10e-29 | 108 |
MS.gene30853.t1 | AT1G01250 | 60.000 | 80 | 32 | 0 | 60 | 139 | 40 | 119 | 8.19e-28 | 105 |
MS.gene30853.t1 | AT3G16280 | 59.494 | 79 | 32 | 0 | 61 | 139 | 57 | 135 | 8.71e-28 | 106 |
MS.gene30853.t1 | AT3G16280 | 47.015 | 134 | 66 | 2 | 61 | 192 | 75 | 205 | 1.07e-27 | 106 |
MS.gene30853.t1 | AT4G16750 | 58.750 | 80 | 33 | 0 | 60 | 139 | 35 | 114 | 1.50e-27 | 103 |
MS.gene30853.t1 | AT2G36450 | 41.398 | 186 | 97 | 5 | 53 | 231 | 3 | 183 | 4.00e-27 | 103 |
MS.gene30853.t1 | AT5G52020 | 40.113 | 177 | 94 | 5 | 61 | 231 | 61 | 231 | 7.00e-26 | 101 |
MS.gene30853.t1 | AT2G25820 | 60.526 | 76 | 30 | 0 | 64 | 139 | 25 | 100 | 1.28e-25 | 100 |
MS.gene30853.t1 | AT3G60490 | 60.000 | 75 | 30 | 0 | 65 | 139 | 71 | 145 | 1.64e-25 | 100 |
MS.gene30853.t1 | AT1G71450 | 44.068 | 118 | 57 | 1 | 65 | 173 | 24 | 141 | 2.47e-22 | 90.5 |
MS.gene30853.t1 | AT1G77200 | 46.218 | 119 | 61 | 2 | 21 | 139 | 2 | 117 | 1.43e-20 | 87.4 |
MS.gene30853.t1 | AT2G47520 | 43.299 | 97 | 51 | 1 | 24 | 120 | 13 | 105 | 2.18e-20 | 85.1 |
MS.gene30853.t1 | AT1G21910 | 47.826 | 92 | 41 | 1 | 65 | 149 | 50 | 141 | 3.44e-19 | 83.2 |
MS.gene30853.t1 | AT1G33760 | 50.549 | 91 | 45 | 0 | 65 | 155 | 20 | 110 | 6.35e-19 | 81.6 |
MS.gene30853.t1 | AT1G12630 | 38.743 | 191 | 84 | 6 | 61 | 231 | 15 | 192 | 9.17e-19 | 81.3 |
MS.gene30853.t1 | AT4G13620 | 41.085 | 129 | 60 | 4 | 7 | 122 | 164 | 289 | 2.08e-18 | 83.2 |
MS.gene30853.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 60 | 122 | 27 | 88 | 6.38e-18 | 77.8 |
MS.gene30853.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 60 | 122 | 27 | 88 | 7.57e-18 | 77.8 |
MS.gene30853.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 60 | 122 | 27 | 88 | 7.57e-18 | 77.8 |
MS.gene30853.t1 | AT3G16770 | 52.564 | 78 | 30 | 1 | 45 | 122 | 66 | 136 | 8.37e-18 | 80.1 |
MS.gene30853.t1 | AT5G21960 | 46.429 | 84 | 45 | 0 | 63 | 146 | 5 | 88 | 4.40e-17 | 77.4 |
MS.gene30853.t1 | AT4G39780 | 55.738 | 61 | 27 | 0 | 60 | 120 | 88 | 148 | 6.11e-17 | 77.8 |
MS.gene30853.t1 | AT1G74930 | 43.023 | 86 | 49 | 0 | 65 | 150 | 21 | 106 | 6.12e-17 | 76.6 |
MS.gene30853.t1 | AT3G50260 | 34.959 | 123 | 68 | 3 | 65 | 187 | 21 | 131 | 9.58e-17 | 75.1 |
MS.gene30853.t1 | AT1G22190 | 50.685 | 73 | 34 | 1 | 50 | 122 | 70 | 140 | 1.23e-16 | 77.0 |
MS.gene30853.t1 | AT1G19210 | 32.500 | 160 | 88 | 3 | 65 | 224 | 12 | 151 | 1.31e-16 | 75.5 |
MS.gene30853.t1 | AT4G06746 | 51.613 | 62 | 30 | 0 | 65 | 126 | 36 | 97 | 4.05e-16 | 73.2 |
MS.gene30853.t1 | AT4G36900 | 55.000 | 60 | 27 | 0 | 61 | 120 | 26 | 85 | 8.28e-16 | 73.6 |
MS.gene30853.t1 | AT2G22200 | 55.932 | 59 | 26 | 0 | 64 | 122 | 70 | 128 | 8.75e-16 | 74.7 |
MS.gene30853.t1 | AT1G78080 | 55.932 | 59 | 26 | 0 | 64 | 122 | 151 | 209 | 1.44e-15 | 74.7 |
MS.gene30853.t1 | AT2G23340 | 57.143 | 56 | 24 | 0 | 65 | 120 | 28 | 83 | 1.67e-15 | 72.0 |
MS.gene30853.t1 | AT5G67190 | 55.357 | 56 | 25 | 0 | 65 | 120 | 21 | 76 | 1.83e-15 | 72.4 |
MS.gene30853.t1 | AT3G11020 | 53.030 | 66 | 31 | 0 | 59 | 124 | 72 | 137 | 2.31e-15 | 74.3 |
MS.gene30853.t1 | AT2G20880 | 33.835 | 133 | 81 | 2 | 41 | 173 | 165 | 290 | 2.53e-15 | 74.3 |
MS.gene30853.t1 | AT1G36060 | 57.895 | 57 | 24 | 0 | 64 | 120 | 142 | 198 | 4.53e-15 | 73.2 |
MS.gene30853.t1 | AT2G33710 | 46.250 | 80 | 38 | 1 | 60 | 134 | 65 | 144 | 5.85e-15 | 71.6 |
MS.gene30853.t1 | AT5G65130 | 43.158 | 95 | 42 | 2 | 40 | 122 | 74 | 168 | 5.92e-15 | 72.4 |
MS.gene30853.t1 | AT2G33710 | 54.098 | 61 | 28 | 0 | 60 | 120 | 65 | 125 | 6.32e-15 | 71.6 |
MS.gene30853.t1 | AT5G65130 | 43.158 | 95 | 42 | 2 | 40 | 122 | 76 | 170 | 6.42e-15 | 72.4 |
MS.gene30853.t1 | AT5G05410 | 55.932 | 59 | 26 | 0 | 65 | 123 | 79 | 137 | 6.45e-15 | 72.8 |
MS.gene30853.t1 | AT1G71520 | 31.973 | 147 | 76 | 4 | 59 | 195 | 8 | 140 | 6.82e-15 | 69.7 |
MS.gene30853.t1 | AT4G28140 | 44.444 | 81 | 40 | 1 | 47 | 122 | 120 | 200 | 7.84e-15 | 72.4 |
MS.gene30853.t1 | AT5G05410 | 57.143 | 56 | 24 | 0 | 65 | 120 | 79 | 134 | 8.19e-15 | 72.8 |
MS.gene30853.t1 | AT5G13330 | 49.315 | 73 | 32 | 2 | 61 | 133 | 37 | 104 | 2.16e-14 | 70.1 |
MS.gene30853.t1 | AT5G07580 | 38.583 | 127 | 70 | 4 | 16 | 136 | 58 | 182 | 2.37e-14 | 69.7 |
MS.gene30853.t1 | AT3G15210 | 57.143 | 56 | 24 | 0 | 65 | 120 | 25 | 80 | 3.45e-14 | 69.7 |
MS.gene30853.t1 | AT1G22810 | 39.785 | 93 | 41 | 2 | 65 | 149 | 14 | 99 | 4.49e-14 | 67.4 |
MS.gene30853.t1 | AT3G61630 | 32.192 | 146 | 81 | 4 | 65 | 198 | 105 | 244 | 4.70e-14 | 70.5 |
MS.gene30853.t1 | AT5G61890 | 53.333 | 60 | 26 | 1 | 61 | 120 | 88 | 145 | 5.55e-14 | 69.3 |
MS.gene30853.t1 | AT3G57600 | 55.357 | 56 | 25 | 0 | 65 | 120 | 28 | 83 | 5.58e-14 | 69.7 |
MS.gene30853.t1 | AT5G61600 | 57.377 | 61 | 23 | 2 | 61 | 120 | 86 | 144 | 7.89e-14 | 68.9 |
MS.gene30853.t1 | AT1G72360 | 48.485 | 66 | 31 | 1 | 55 | 120 | 18 | 80 | 8.78e-14 | 68.2 |
MS.gene30853.t1 | AT5G44210 | 55.357 | 56 | 25 | 0 | 65 | 120 | 33 | 88 | 9.01e-14 | 68.2 |
MS.gene30853.t1 | AT1G72360 | 48.529 | 68 | 31 | 2 | 53 | 120 | 68 | 131 | 1.55e-13 | 68.6 |
MS.gene30853.t1 | AT1G72360 | 48.529 | 68 | 31 | 2 | 53 | 120 | 66 | 129 | 1.61e-13 | 68.2 |
MS.gene30853.t1 | AT5G64750 | 38.384 | 99 | 55 | 2 | 75 | 173 | 195 | 287 | 1.72e-13 | 69.3 |
MS.gene30853.t1 | AT1G15360 | 55.357 | 56 | 25 | 0 | 65 | 120 | 7 | 62 | 1.73e-13 | 67.4 |
MS.gene30853.t1 | AT1G15360 | 55.357 | 56 | 25 | 0 | 65 | 120 | 7 | 62 | 1.73e-13 | 67.4 |
MS.gene30853.t1 | AT5G51190 | 52.308 | 65 | 30 | 1 | 57 | 120 | 64 | 128 | 1.93e-13 | 67.4 |
MS.gene30853.t1 | AT4G11140 | 38.710 | 93 | 44 | 2 | 65 | 150 | 87 | 173 | 2.29e-13 | 68.2 |
MS.gene30853.t1 | AT4G27950 | 53.571 | 56 | 26 | 0 | 65 | 120 | 118 | 173 | 2.66e-13 | 68.6 |
MS.gene30853.t1 | AT1G03800 | 47.059 | 68 | 33 | 1 | 53 | 120 | 44 | 108 | 3.90e-13 | 67.0 |
MS.gene30853.t1 | AT5G47230 | 53.125 | 64 | 27 | 2 | 58 | 120 | 151 | 212 | 4.10e-13 | 67.8 |
MS.gene30853.t1 | AT5G43410 | 51.667 | 60 | 28 | 1 | 62 | 120 | 12 | 71 | 4.92e-13 | 64.3 |
MS.gene30853.t1 | AT1G75490 | 45.833 | 72 | 39 | 0 | 64 | 135 | 41 | 112 | 6.19e-13 | 65.9 |
MS.gene30853.t1 | AT4G31060 | 50.000 | 56 | 28 | 0 | 65 | 120 | 27 | 82 | 7.77e-13 | 65.1 |
MS.gene30853.t1 | AT5G19790 | 46.154 | 78 | 38 | 2 | 46 | 122 | 5 | 79 | 1.08e-12 | 65.9 |
MS.gene30853.t1 | AT5G25390 | 51.786 | 56 | 27 | 0 | 65 | 120 | 7 | 62 | 1.33e-12 | 64.7 |
MS.gene30853.t1 | AT3G23230 | 52.632 | 57 | 26 | 1 | 65 | 120 | 20 | 76 | 1.49e-12 | 63.5 |
MS.gene30853.t1 | AT5G53290 | 50.877 | 57 | 28 | 0 | 65 | 121 | 125 | 181 | 2.73e-12 | 65.5 |
MS.gene30853.t1 | AT3G20310 | 50.000 | 62 | 31 | 0 | 59 | 120 | 21 | 82 | 2.80e-12 | 64.7 |
MS.gene30853.t1 | AT5G25190 | 55.357 | 56 | 25 | 0 | 65 | 120 | 8 | 63 | 3.05e-12 | 63.5 |
MS.gene30853.t1 | AT1G28360 | 55.357 | 56 | 25 | 0 | 65 | 120 | 12 | 67 | 3.85e-12 | 63.5 |
MS.gene30853.t1 | AT5G18450 | 51.724 | 58 | 28 | 0 | 64 | 121 | 33 | 90 | 4.28e-12 | 64.7 |
MS.gene30853.t1 | AT1G77640 | 48.889 | 90 | 40 | 2 | 65 | 148 | 43 | 132 | 4.64e-12 | 63.9 |
MS.gene30853.t1 | AT2G46310 | 31.343 | 134 | 83 | 3 | 65 | 195 | 99 | 226 | 5.97e-12 | 64.3 |
MS.gene30853.t1 | AT4G17490 | 51.562 | 64 | 28 | 2 | 58 | 120 | 132 | 193 | 6.52e-12 | 63.9 |
MS.gene30853.t1 | AT1G28370 | 51.786 | 56 | 27 | 0 | 65 | 120 | 20 | 75 | 6.76e-12 | 62.4 |
MS.gene30853.t1 | AT5G61590 | 48.276 | 87 | 42 | 2 | 51 | 136 | 95 | 179 | 7.99e-12 | 62.8 |
MS.gene30853.t1 | AT4G23750 | 49.123 | 57 | 29 | 0 | 65 | 121 | 122 | 178 | 1.03e-11 | 63.9 |
MS.gene30853.t1 | AT4G23750 | 49.123 | 57 | 29 | 0 | 65 | 121 | 122 | 178 | 1.03e-11 | 63.9 |
MS.gene30853.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 65 | 120 | 14 | 69 | 1.22e-11 | 63.2 |
MS.gene30853.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 65 | 120 | 14 | 69 | 1.22e-11 | 63.2 |
MS.gene30853.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 65 | 120 | 14 | 69 | 1.22e-11 | 63.2 |
MS.gene30853.t1 | AT1G28370 | 51.786 | 56 | 27 | 0 | 65 | 120 | 58 | 113 | 1.23e-11 | 62.4 |
MS.gene30853.t1 | AT1G12890 | 42.308 | 78 | 42 | 1 | 43 | 120 | 2 | 76 | 1.31e-11 | 62.4 |
MS.gene30853.t1 | AT2G40350 | 45.833 | 72 | 32 | 1 | 65 | 136 | 74 | 138 | 1.34e-11 | 61.2 |
MS.gene30853.t1 | AT1G50640 | 53.571 | 56 | 26 | 0 | 65 | 120 | 28 | 83 | 1.50e-11 | 62.4 |
MS.gene30853.t1 | AT2G40350 | 45.833 | 72 | 32 | 1 | 65 | 136 | 67 | 131 | 1.54e-11 | 60.8 |
MS.gene30853.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 65 | 120 | 72 | 127 | 1.93e-11 | 62.8 |
MS.gene30853.t1 | AT5G47220 | 52.632 | 57 | 26 | 1 | 65 | 120 | 117 | 173 | 1.94e-11 | 62.4 |
MS.gene30853.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 65 | 120 | 72 | 127 | 2.28e-11 | 62.8 |
MS.gene30853.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 65 | 120 | 79 | 134 | 2.67e-11 | 62.8 |
MS.gene30853.t1 | AT5G07310 | 51.562 | 64 | 29 | 1 | 61 | 124 | 90 | 151 | 6.82e-11 | 60.8 |
Find 77 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATGAACTCTCGGTGGAATT+TGG | 0.218037 | 6.2:-58411458 | None:intergenic |
ATGTTGCTTCAATGGCATTA+AGG | 0.227810 | 6.2:+58411720 | MS.gene30853:CDS |
TTCCTCCCAGCACGCTTCTT+TGG | 0.236811 | 6.2:-58411548 | None:intergenic |
GGAAGAGGAACTTAGATAAA+TGG | 0.256718 | 6.2:+58411612 | MS.gene30853:CDS |
CAAATCTTAGTCTTCTTGTT+TGG | 0.292823 | 6.2:-58411653 | None:intergenic |
GCCAGAGTTGTTGAGGAATA+TGG | 0.301561 | 6.2:+58411973 | MS.gene30853:CDS |
ACCTCTTCATCTTGAAAATC+TGG | 0.311282 | 6.2:-58412061 | None:intergenic |
GCCTGAGTGGTGGCAGGTAT+AGG | 0.319307 | 6.2:-58411788 | None:intergenic |
GACTCGCCACCCGGTATATA+GGG | 0.321867 | 6.2:+58411583 | MS.gene30853:CDS |
AGACTCGCCACCCGGTATAT+AGG | 0.350439 | 6.2:+58411582 | MS.gene30853:CDS |
CCTGAGTGGTGGCAGGTATA+GGG | 0.356312 | 6.2:-58411787 | None:intergenic |
CGGTGGAATTTGGAGAAAAC+TGG | 0.366649 | 6.2:-58411448 | None:intergenic |
GACTTGTATGGAAGAGGAAG+AGG | 0.398759 | 6.2:+58411928 | MS.gene30853:CDS |
ATGTGCCCGGGCTGCCATCT+CGG | 0.400727 | 6.2:-58411696 | None:intergenic |
TGTTGCTTCAATGGCATTAA+GGG | 0.407611 | 6.2:+58411721 | MS.gene30853:CDS |
AACTGCCGAGATGGCAGCCC+GGG | 0.407631 | 6.2:+58411691 | MS.gene30853:CDS |
TGCGAATTCAGAGGGCTCTC+AGG | 0.415939 | 6.2:+58411481 | MS.gene30853:CDS |
CAAACAAGAAGACTAAGATT+TGG | 0.423028 | 6.2:+58411654 | MS.gene30853:CDS |
GAAGAGGAAGAGGAAGAAGA+GGG | 0.430166 | 6.2:+58411938 | MS.gene30853:CDS |
GAAGAGGAACTTAGATAAAT+GGG | 0.434368 | 6.2:+58411613 | MS.gene30853:CDS |
TGCTGGGAGGAAGAAGTTCC+AGG | 0.438027 | 6.2:+58411559 | MS.gene30853:CDS |
ATGTCTCCTACACATAGCTT+TGG | 0.439535 | 6.2:+58412001 | MS.gene30853:CDS |
GGCACATGATGTTGCTTCAA+TGG | 0.452514 | 6.2:+58411712 | MS.gene30853:CDS |
TGTCTCCTACACATAGCTTT+GGG | 0.457669 | 6.2:+58412002 | MS.gene30853:CDS |
GCTAACCTCACTTCCTCGTT+GGG | 0.459051 | 6.2:-58411515 | None:intergenic |
ATACCGGGTGGCGAGTCTCC+TGG | 0.468976 | 6.2:-58411577 | None:intergenic |
TTCCTCACACCCCTATATAC+CGG | 0.471420 | 6.2:-58411593 | None:intergenic |
GGAGCAGAGTAGGACTTGTA+TGG | 0.472667 | 6.2:+58411916 | MS.gene30853:CDS |
GGAAGAGGAAGAGGAAGAAG+AGG | 0.473659 | 6.2:+58411937 | MS.gene30853:CDS |
CGGGCTGCCATCTCGGCAGT+TGG | 0.488790 | 6.2:-58411689 | None:intergenic |
TTGAAGCAACATCATGTGCC+CGG | 0.494126 | 6.2:-58411709 | None:intergenic |
ACGACTCCAAAGAAGCGTGC+TGG | 0.499803 | 6.2:+58411542 | MS.gene30853:CDS |
AGCGGCTGCACAGGCCGCAG+AGG | 0.499896 | 6.2:+58411826 | MS.gene30853:CDS |
TATATAGGGGTGTGAGGAAG+AGG | 0.500596 | 6.2:+58411597 | MS.gene30853:CDS |
AGCTAACCTCACTTCCTCGT+TGG | 0.500899 | 6.2:-58411516 | None:intergenic |
CGACTCCAAAGAAGCGTGCT+GGG | 0.504020 | 6.2:+58411543 | MS.gene30853:CDS |
GGCCGCAGAGGCTTTCAGAC+CGG | 0.508268 | 6.2:+58411838 | MS.gene30853:CDS |
AAGATGAAGAGGTATCACTA+TGG | 0.512792 | 6.2:+58412071 | MS.gene30853:CDS |
GAGTAGGACTTGTATGGAAG+AGG | 0.516467 | 6.2:+58411922 | MS.gene30853:CDS |
GCCATATTCCTCAACAACTC+TGG | 0.516505 | 6.2:-58411974 | None:intergenic |
GCGAATTCAGAGGGCTCTCA+GGG | 0.519443 | 6.2:+58411482 | MS.gene30853:CDS |
CAACTGCCGAGATGGCAGCC+CGG | 0.522483 | 6.2:+58411690 | MS.gene30853:CDS |
AAGAGGAAGAGGAAGAAGAG+GGG | 0.525108 | 6.2:+58411939 | MS.gene30853:CDS |
TTAGTCATCGAAGTCTTGTC+CGG | 0.525341 | 6.2:-58411857 | None:intergenic |
TGAATTCGCAAATGAACTCT+CGG | 0.541132 | 6.2:-58411468 | None:intergenic |
TAAATGGGTGTGTGAAATGA+GGG | 0.541686 | 6.2:+58411628 | MS.gene30853:CDS |
GGCTATTGCCACCTCTGCTA+CGG | 0.542428 | 6.2:+58411892 | MS.gene30853:CDS |
GGAGTCTGCAAAGTTGAGAC+AGG | 0.548191 | 6.2:-58411753 | None:intergenic |
AGTTCATTTGCGAATTCAGA+GGG | 0.549616 | 6.2:+58411473 | MS.gene30853:CDS |
AGAGGAAGAGGAAGAAGAGG+GGG | 0.554107 | 6.2:+58411940 | MS.gene30853:CDS |
GTTCCAGGAGACTCGCCACC+CGG | 0.558195 | 6.2:+58411574 | MS.gene30853:CDS |
CCCTATACCTGCCACCACTC+AGG | 0.559517 | 6.2:+58411787 | MS.gene30853:CDS |
CTGCTACGGAGGAGCAGAGT+AGG | 0.566112 | 6.2:+58411906 | MS.gene30853:CDS |
CTGCTCCTCCGTAGCAGAGG+TGG | 0.568749 | 6.2:-58411900 | None:intergenic |
TGAAGCAACATCATGTGCCC+GGG | 0.576327 | 6.2:-58411708 | None:intergenic |
TATTGCCACCTCTGCTACGG+AGG | 0.578389 | 6.2:+58411895 | MS.gene30853:CDS |
AAGAAGACTAAGATTTGGCT+AGG | 0.578791 | 6.2:+58411659 | MS.gene30853:CDS |
TCCTCACACCCCTATATACC+GGG | 0.585609 | 6.2:-58411592 | None:intergenic |
ATAAATGGGTGTGTGAAATG+AGG | 0.586819 | 6.2:+58411627 | MS.gene30853:CDS |
GAGTTCATTTGCGAATTCAG+AGG | 0.592725 | 6.2:+58411472 | MS.gene30853:CDS |
TGAACATGCCAGAGTTGTTG+AGG | 0.595940 | 6.2:+58411966 | MS.gene30853:CDS |
TGATACCCAAAGCTATGTGT+AGG | 0.600852 | 6.2:-58412007 | None:intergenic |
GTTGCTTCAATGGCATTAAG+GGG | 0.609844 | 6.2:+58411722 | MS.gene30853:CDS |
ACTCTGCTCCTCCGTAGCAG+AGG | 0.628165 | 6.2:-58411903 | None:intergenic |
CAATTCCCAACGAGGAAGTG+AGG | 0.632492 | 6.2:+58411510 | MS.gene30853:CDS |
ACTCGCCACCCGGTATATAG+GGG | 0.659441 | 6.2:+58411584 | MS.gene30853:CDS |
ACCCGGTATATAGGGGTGTG+AGG | 0.669533 | 6.2:+58411591 | MS.gene30853:CDS |
TCAACTTTGCAGACTCCGCG+TGG | 0.671197 | 6.2:+58411759 | MS.gene30853:CDS |
GTCCGGTCTGAAAGCCTCTG+CGG | 0.672100 | 6.2:-58411840 | None:intergenic |
CTCCAAAGAAGCGTGCTGGG+AGG | 0.687412 | 6.2:+58411546 | MS.gene30853:CDS |
ATTCGCAAATGAACTCTCGG+TGG | 0.692873 | 6.2:-58411465 | None:intergenic |
GAATTTGGAGAAAACTGGTG+TGG | 0.699539 | 6.2:-58411443 | None:intergenic |
GATGACTAATGACATTGACA+CGG | 0.709180 | 6.2:+58411871 | MS.gene30853:CDS |
CGAATTCAGAGGGCTCTCAG+GGG | 0.717384 | 6.2:+58411483 | MS.gene30853:CDS |
AGGTATAGGGAGTCGCCACG+CGG | 0.731956 | 6.2:-58411774 | None:intergenic |
GGGGATGTCAATTCCCAACG+AGG | 0.739386 | 6.2:+58411502 | MS.gene30853:CDS |
TCACACCCCTATATACCGGG+TGG | 0.772358 | 6.2:-58411589 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
CAAACAAGAAGACTAAGATT+TGG | + | chr6.2:58411654-58411673 | MS.gene30853:CDS | 30.0% | |
GAAGAGGAACTTAGATAAAT+GGG | + | chr6.2:58411613-58411632 | MS.gene30853:CDS | 30.0% | |
GGCAAAAGATATACAAAAAG+CGG | + | chr6.2:58411808-58411827 | MS.gene30853:CDS | 30.0% | |
! | CAAATCTTAGTCTTCTTGTT+TGG | - | chr6.2:58411656-58411675 | None:intergenic | 30.0% |
AAGAAGACTAAGATTTGGCT+AGG | + | chr6.2:58411659-58411678 | MS.gene30853:CDS | 35.0% | |
ACCTCTTCATCTTGAAAATC+TGG | - | chr6.2:58412064-58412083 | None:intergenic | 35.0% | |
AGTTCATTTGCGAATTCAGA+GGG | + | chr6.2:58411473-58411492 | MS.gene30853:CDS | 35.0% | |
ATAAATGGGTGTGTGAAATG+AGG | + | chr6.2:58411627-58411646 | MS.gene30853:CDS | 35.0% | |
GATGACTAATGACATTGACA+CGG | + | chr6.2:58411871-58411890 | MS.gene30853:CDS | 35.0% | |
GGAAGAGGAACTTAGATAAA+TGG | + | chr6.2:58411612-58411631 | MS.gene30853:CDS | 35.0% | |
TAAATGGGTGTGTGAAATGA+GGG | + | chr6.2:58411628-58411647 | MS.gene30853:CDS | 35.0% | |
TGAATTCGCAAATGAACTCT+CGG | - | chr6.2:58411471-58411490 | None:intergenic | 35.0% | |
! | ATGTTGCTTCAATGGCATTA+AGG | + | chr6.2:58411720-58411739 | MS.gene30853:CDS | 35.0% |
! | TGTTGCTTCAATGGCATTAA+GGG | + | chr6.2:58411721-58411740 | MS.gene30853:CDS | 35.0% |
! | TTGTATATCTTTTGCCTGAG+TGG | - | chr6.2:58411804-58411823 | None:intergenic | 35.0% |
!! | AAGATGAAGAGGTATCACTA+TGG | + | chr6.2:58412071-58412090 | MS.gene30853:CDS | 35.0% |
!! | TCCAGATTTTCAAGATGAAG+AGG | + | chr6.2:58412060-58412079 | MS.gene30853:CDS | 35.0% |
AATGAACTCTCGGTGGAATT+TGG | - | chr6.2:58411461-58411480 | None:intergenic | 40.0% | |
ATGTCTCCTACACATAGCTT+TGG | + | chr6.2:58412001-58412020 | MS.gene30853:CDS | 40.0% | |
GAATTTGGAGAAAACTGGTG+TGG | - | chr6.2:58411446-58411465 | None:intergenic | 40.0% | |
GAGTTCATTTGCGAATTCAG+AGG | + | chr6.2:58411472-58411491 | MS.gene30853:CDS | 40.0% | |
GTTGCTTCAATGGCATTAAG+GGG | + | chr6.2:58411722-58411741 | MS.gene30853:CDS | 40.0% | |
TGATACCCAAAGCTATGTGT+AGG | - | chr6.2:58412010-58412029 | None:intergenic | 40.0% | |
TGTCTCCTACACATAGCTTT+GGG | + | chr6.2:58412002-58412021 | MS.gene30853:CDS | 40.0% | |
! | TATATCTTTTGCCTGAGTGG+TGG | - | chr6.2:58411801-58411820 | None:intergenic | 40.0% |
! | TTAGTCATCGAAGTCTTGTC+CGG | - | chr6.2:58411860-58411879 | None:intergenic | 40.0% |
AAGAGGAAGAGGAAGAAGAG+GGG | + | chr6.2:58411939-58411958 | MS.gene30853:CDS | 45.0% | |
ATTCGCAAATGAACTCTCGG+TGG | - | chr6.2:58411468-58411487 | None:intergenic | 45.0% | |
CGGTGGAATTTGGAGAAAAC+TGG | - | chr6.2:58411451-58411470 | None:intergenic | 45.0% | |
GAAGAGGAAGAGGAAGAAGA+GGG | + | chr6.2:58411938-58411957 | MS.gene30853:CDS | 45.0% | |
GACTTGTATGGAAGAGGAAG+AGG | + | chr6.2:58411928-58411947 | MS.gene30853:CDS | 45.0% | |
GAGTAGGACTTGTATGGAAG+AGG | + | chr6.2:58411922-58411941 | MS.gene30853:CDS | 45.0% | |
GCCAGAGTTGTTGAGGAATA+TGG | + | chr6.2:58411973-58411992 | MS.gene30853:CDS | 45.0% | |
GCCATATTCCTCAACAACTC+TGG | - | chr6.2:58411977-58411996 | None:intergenic | 45.0% | |
TATACAAAAAGCGGCTGCAC+AGG | + | chr6.2:58411817-58411836 | MS.gene30853:CDS | 45.0% | |
TGAACATGCCAGAGTTGTTG+AGG | + | chr6.2:58411966-58411985 | MS.gene30853:CDS | 45.0% | |
TTCCTCACACCCCTATATAC+CGG | - | chr6.2:58411596-58411615 | None:intergenic | 45.0% | |
TTGAAGCAACATCATGTGCC+CGG | - | chr6.2:58411712-58411731 | None:intergenic | 45.0% | |
! | GGCACATGATGTTGCTTCAA+TGG | + | chr6.2:58411712-58411731 | MS.gene30853:CDS | 45.0% |
! | TATATAGGGGTGTGAGGAAG+AGG | + | chr6.2:58411597-58411616 | MS.gene30853:CDS | 45.0% |
AGAGGAAGAGGAAGAAGAGG+GGG | + | chr6.2:58411940-58411959 | MS.gene30853:CDS | 50.0% | |
AGCTAACCTCACTTCCTCGT+TGG | - | chr6.2:58411519-58411538 | None:intergenic | 50.0% | |
CAATTCCCAACGAGGAAGTG+AGG | + | chr6.2:58411510-58411529 | MS.gene30853:CDS | 50.0% | |
GCTAACCTCACTTCCTCGTT+GGG | - | chr6.2:58411518-58411537 | None:intergenic | 50.0% | |
GGAAGAGGAAGAGGAAGAAG+AGG | + | chr6.2:58411937-58411956 | MS.gene30853:CDS | 50.0% | |
GGAGCAGAGTAGGACTTGTA+TGG | + | chr6.2:58411916-58411935 | MS.gene30853:CDS | 50.0% | |
GGAGTCTGCAAAGTTGAGAC+AGG | - | chr6.2:58411756-58411775 | None:intergenic | 50.0% | |
TCCTCACACCCCTATATACC+GGG | - | chr6.2:58411595-58411614 | None:intergenic | 50.0% | |
TGAAGCAACATCATGTGCCC+GGG | - | chr6.2:58411711-58411730 | None:intergenic | 50.0% | |
! | CACTTTTCCAACTGCCGAGA+TGG | + | chr6.2:58411682-58411701 | MS.gene30853:CDS | 50.0% |
ACTCGCCACCCGGTATATAG+GGG | + | chr6.2:58411584-58411603 | MS.gene30853:CDS | 55.0% | |
AGACTCGCCACCCGGTATAT+AGG | + | chr6.2:58411582-58411601 | MS.gene30853:CDS | 55.0% | |
CCTGAGTGGTGGCAGGTATA+GGG | - | chr6.2:58411790-58411809 | None:intergenic | 55.0% | |
CGAATTCAGAGGGCTCTCAG+GGG | + | chr6.2:58411483-58411502 | MS.gene30853:CDS | 55.0% | |
GACTCGCCACCCGGTATATA+GGG | + | chr6.2:58411583-58411602 | MS.gene30853:CDS | 55.0% | |
GCGAATTCAGAGGGCTCTCA+GGG | + | chr6.2:58411482-58411501 | MS.gene30853:CDS | 55.0% | |
GGCTATTGCCACCTCTGCTA+CGG | + | chr6.2:58411892-58411911 | MS.gene30853:CDS | 55.0% | |
GGGGATGTCAATTCCCAACG+AGG | + | chr6.2:58411502-58411521 | MS.gene30853:CDS | 55.0% | |
TATTGCCACCTCTGCTACGG+AGG | + | chr6.2:58411895-58411914 | MS.gene30853:CDS | 55.0% | |
TCAACTTTGCAGACTCCGCG+TGG | + | chr6.2:58411759-58411778 | MS.gene30853:CDS | 55.0% | |
TCACACCCCTATATACCGGG+TGG | - | chr6.2:58411592-58411611 | None:intergenic | 55.0% | |
TGCGAATTCAGAGGGCTCTC+AGG | + | chr6.2:58411481-58411500 | MS.gene30853:CDS | 55.0% | |
TGCTGGGAGGAAGAAGTTCC+AGG | + | chr6.2:58411559-58411578 | MS.gene30853:CDS | 55.0% | |
TTCCTCCCAGCACGCTTCTT+TGG | - | chr6.2:58411551-58411570 | None:intergenic | 55.0% | |
! | ACCCGGTATATAGGGGTGTG+AGG | + | chr6.2:58411591-58411610 | MS.gene30853:CDS | 55.0% |
! | ACGACTCCAAAGAAGCGTGC+TGG | + | chr6.2:58411542-58411561 | MS.gene30853:CDS | 55.0% |
! | CGACTCCAAAGAAGCGTGCT+GGG | + | chr6.2:58411543-58411562 | MS.gene30853:CDS | 55.0% |
! | TCTTTTGCCTGAGTGGTGGC+AGG | - | chr6.2:58411797-58411816 | None:intergenic | 55.0% |
ACTCTGCTCCTCCGTAGCAG+AGG | - | chr6.2:58411906-58411925 | None:intergenic | 60.0% | |
AGGTATAGGGAGTCGCCACG+CGG | - | chr6.2:58411777-58411796 | None:intergenic | 60.0% | |
CCCTATACCTGCCACCACTC+AGG | + | chr6.2:58411787-58411806 | MS.gene30853:CDS | 60.0% | |
CTGCTACGGAGGAGCAGAGT+AGG | + | chr6.2:58411906-58411925 | MS.gene30853:CDS | 60.0% | |
GCCTGAGTGGTGGCAGGTAT+AGG | - | chr6.2:58411791-58411810 | None:intergenic | 60.0% | |
GTCCGGTCTGAAAGCCTCTG+CGG | - | chr6.2:58411843-58411862 | None:intergenic | 60.0% | |
! | CTCCAAAGAAGCGTGCTGGG+AGG | + | chr6.2:58411546-58411565 | MS.gene30853:CDS | 60.0% |
AACTGCCGAGATGGCAGCCC+GGG | + | chr6.2:58411691-58411710 | MS.gene30853:CDS | 65.0% | |
ATACCGGGTGGCGAGTCTCC+TGG | - | chr6.2:58411580-58411599 | None:intergenic | 65.0% | |
ATGTGCCCGGGCTGCCATCT+CGG | - | chr6.2:58411699-58411718 | None:intergenic | 65.0% | |
CAACTGCCGAGATGGCAGCC+CGG | + | chr6.2:58411690-58411709 | MS.gene30853:CDS | 65.0% | |
CTGCTCCTCCGTAGCAGAGG+TGG | - | chr6.2:58411903-58411922 | None:intergenic | 65.0% | |
GGCCGCAGAGGCTTTCAGAC+CGG | + | chr6.2:58411838-58411857 | MS.gene30853:CDS | 65.0% | |
GTTCCAGGAGACTCGCCACC+CGG | + | chr6.2:58411574-58411593 | MS.gene30853:CDS | 65.0% | |
CGGGCTGCCATCTCGGCAGT+TGG | - | chr6.2:58411692-58411711 | None:intergenic | 70.0% | |
AGCGGCTGCACAGGCCGCAG+AGG | + | chr6.2:58411826-58411845 | MS.gene30853:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 58411407 | 58412102 | 58411407 | ID=MS.gene30853 |
chr6.2 | mRNA | 58411407 | 58412102 | 58411407 | ID=MS.gene30853.t1;Parent=MS.gene30853 |
chr6.2 | exon | 58411407 | 58412102 | 58411407 | ID=MS.gene30853.t1.exon1;Parent=MS.gene30853.t1 |
chr6.2 | CDS | 58411407 | 58412102 | 58411407 | ID=cds.MS.gene30853.t1;Parent=MS.gene30853.t1 |
Gene Sequence |
Protein sequence |