Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30851.t1 | AGR40683.1 | 87.7 | 228 | 27 | 1 | 2 | 229 | 1 | 227 | 2.70E-106 | 394.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30851.t1 | Q9M0L0 | 56.2 | 194 | 72 | 3 | 43 | 229 | 29 | 216 | 8.9e-50 | 198.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30851.t1 | S5MAB5 | 87.7 | 228 | 27 | 1 | 2 | 229 | 1 | 227 | 1.9e-106 | 394.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene30851.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30851.t1 | MTR_6g465690 | 88.158 | 228 | 23 | 2 | 2 | 226 | 1 | 227 | 2.79e-142 | 398 |
MS.gene30851.t1 | MTR_6g466000 | 76.526 | 213 | 36 | 2 | 27 | 229 | 19 | 227 | 5.10e-115 | 328 |
MS.gene30851.t1 | MTR_6g465450 | 72.273 | 220 | 51 | 4 | 4 | 221 | 1 | 212 | 5.40e-107 | 308 |
MS.gene30851.t1 | MTR_6g465420 | 68.493 | 219 | 60 | 2 | 4 | 221 | 1 | 211 | 2.76e-102 | 297 |
MS.gene30851.t1 | MTR_6g465460 | 75.410 | 183 | 43 | 2 | 40 | 221 | 29 | 210 | 2.29e-101 | 295 |
MS.gene30851.t1 | MTR_6g465430 | 75.135 | 185 | 45 | 1 | 38 | 221 | 27 | 211 | 3.89e-100 | 291 |
MS.gene30851.t1 | MTR_6g466130 | 73.558 | 208 | 49 | 3 | 24 | 229 | 25 | 228 | 5.04e-99 | 288 |
MS.gene30851.t1 | MTR_6g465530 | 70.854 | 199 | 47 | 3 | 37 | 229 | 5 | 198 | 4.61e-93 | 271 |
MS.gene30851.t1 | MTR_6g465510 | 70.673 | 208 | 42 | 3 | 37 | 229 | 5 | 208 | 2.15e-92 | 270 |
MS.gene30851.t1 | MTR_6g465990 | 65.278 | 216 | 41 | 3 | 24 | 229 | 2 | 193 | 1.40e-86 | 254 |
MS.gene30851.t1 | MTR_6g465850 | 55.159 | 252 | 53 | 4 | 34 | 229 | 32 | 279 | 5.94e-79 | 238 |
MS.gene30851.t1 | MTR_1g101600 | 64.767 | 193 | 63 | 2 | 37 | 229 | 13 | 200 | 3.16e-77 | 231 |
MS.gene30851.t1 | MTR_6g466020 | 58.621 | 203 | 60 | 3 | 24 | 226 | 2 | 180 | 4.37e-68 | 207 |
MS.gene30851.t1 | MTR_5g010930 | 46.154 | 208 | 87 | 6 | 40 | 229 | 24 | 224 | 2.25e-53 | 171 |
MS.gene30851.t1 | MTR_5g010940 | 41.850 | 227 | 107 | 5 | 20 | 229 | 9 | 227 | 3.88e-51 | 166 |
MS.gene30851.t1 | MTR_4g102660 | 51.942 | 206 | 83 | 8 | 37 | 229 | 16 | 218 | 8.15e-51 | 165 |
MS.gene30851.t1 | MTR_5g010910 | 41.778 | 225 | 105 | 6 | 23 | 229 | 6 | 222 | 3.21e-48 | 158 |
MS.gene30851.t1 | MTR_3g110205 | 58.333 | 96 | 40 | 0 | 60 | 155 | 38 | 133 | 9.79e-34 | 120 |
MS.gene30851.t1 | MTR_8g006410 | 67.949 | 78 | 25 | 0 | 62 | 139 | 49 | 126 | 1.02e-33 | 120 |
MS.gene30851.t1 | MTR_7g046260 | 66.667 | 81 | 27 | 0 | 59 | 139 | 55 | 135 | 2.34e-33 | 120 |
MS.gene30851.t1 | MTR_7g117690 | 63.750 | 80 | 29 | 0 | 60 | 139 | 23 | 102 | 2.84e-31 | 113 |
MS.gene30851.t1 | MTR_5g012910 | 63.291 | 79 | 29 | 0 | 61 | 139 | 24 | 102 | 1.07e-30 | 112 |
MS.gene30851.t1 | MTR_2g085015 | 40.964 | 166 | 71 | 5 | 59 | 199 | 41 | 204 | 1.66e-30 | 112 |
MS.gene30851.t1 | MTR_2g101340 | 53.465 | 101 | 41 | 2 | 45 | 139 | 15 | 115 | 5.44e-30 | 110 |
MS.gene30851.t1 | MTR_8g102800 | 55.556 | 99 | 44 | 0 | 55 | 153 | 27 | 125 | 3.21e-29 | 109 |
MS.gene30851.t1 | MTR_8g013860 | 54.639 | 97 | 43 | 1 | 44 | 139 | 25 | 121 | 5.58e-29 | 108 |
MS.gene30851.t1 | MTR_6g088405 | 60.256 | 78 | 31 | 0 | 62 | 139 | 41 | 118 | 5.27e-28 | 106 |
MS.gene30851.t1 | MTR_8g027465 | 54.000 | 100 | 40 | 2 | 43 | 139 | 20 | 116 | 5.74e-28 | 104 |
MS.gene30851.t1 | MTR_4g102670 | 40.571 | 175 | 80 | 6 | 61 | 229 | 11 | 167 | 4.59e-27 | 102 |
MS.gene30851.t1 | MTR_4g100650 | 60.256 | 78 | 31 | 0 | 62 | 139 | 71 | 148 | 4.48e-26 | 102 |
MS.gene30851.t1 | MTR_6g088425 | 49.123 | 114 | 48 | 1 | 43 | 146 | 17 | 130 | 4.93e-24 | 96.3 |
MS.gene30851.t1 | MTR_4g035430 | 46.429 | 112 | 53 | 2 | 35 | 146 | 9 | 113 | 1.14e-23 | 94.7 |
MS.gene30851.t1 | MTR_1g006660 | 60.759 | 79 | 31 | 0 | 61 | 139 | 43 | 121 | 8.57e-22 | 90.9 |
MS.gene30851.t1 | MTR_5g008550 | 48.000 | 100 | 50 | 1 | 65 | 162 | 21 | 120 | 1.35e-20 | 86.3 |
MS.gene30851.t1 | MTR_5g008590 | 36.364 | 176 | 100 | 3 | 65 | 228 | 11 | 186 | 3.45e-19 | 82.0 |
MS.gene30851.t1 | MTR_1g014780 | 33.548 | 155 | 89 | 3 | 34 | 175 | 1 | 154 | 7.38e-19 | 82.4 |
MS.gene30851.t1 | MTR_2g435590 | 37.795 | 127 | 77 | 1 | 9 | 135 | 42 | 166 | 2.12e-18 | 81.6 |
MS.gene30851.t1 | MTR_1g014820 | 34.884 | 129 | 73 | 3 | 64 | 183 | 26 | 152 | 4.38e-17 | 78.2 |
MS.gene30851.t1 | MTR_3g102100 | 58.929 | 56 | 23 | 0 | 65 | 120 | 45 | 100 | 5.03e-17 | 76.3 |
MS.gene30851.t1 | MTR_1g101550 | 36.571 | 175 | 100 | 3 | 65 | 229 | 57 | 230 | 7.97e-17 | 77.0 |
MS.gene30851.t1 | MTR_5g083340 | 60.345 | 58 | 23 | 0 | 65 | 122 | 85 | 142 | 8.26e-17 | 79.0 |
MS.gene30851.t1 | MTR_5g008470 | 44.048 | 84 | 47 | 0 | 67 | 150 | 77 | 160 | 9.79e-17 | 75.5 |
MS.gene30851.t1 | MTR_1g060910 | 33.140 | 172 | 70 | 6 | 49 | 199 | 3 | 150 | 1.12e-16 | 75.1 |
MS.gene30851.t1 | MTR_1g090170 | 43.820 | 89 | 44 | 1 | 60 | 148 | 147 | 229 | 2.16e-16 | 77.0 |
MS.gene30851.t1 | MTR_2g043050 | 44.706 | 85 | 47 | 0 | 64 | 148 | 18 | 102 | 2.40e-16 | 75.1 |
MS.gene30851.t1 | MTR_1g014860 | 31.387 | 137 | 85 | 2 | 60 | 187 | 17 | 153 | 3.14e-16 | 75.1 |
MS.gene30851.t1 | MTR_5g062700 | 57.627 | 59 | 25 | 0 | 64 | 122 | 172 | 230 | 4.65e-16 | 76.6 |
MS.gene30851.t1 | MTR_1g019110 | 43.333 | 90 | 43 | 1 | 65 | 146 | 44 | 133 | 4.83e-16 | 73.6 |
MS.gene30851.t1 | MTR_1g090170 | 43.820 | 89 | 44 | 1 | 60 | 148 | 234 | 316 | 4.90e-16 | 76.6 |
MS.gene30851.t1 | MTR_3g074130 | 59.649 | 57 | 23 | 0 | 64 | 120 | 149 | 205 | 5.37e-16 | 75.9 |
MS.gene30851.t1 | MTR_2g105380 | 43.333 | 90 | 46 | 1 | 53 | 137 | 105 | 194 | 5.69e-16 | 76.3 |
MS.gene30851.t1 | MTR_7g020980 | 54.688 | 64 | 28 | 1 | 58 | 120 | 43 | 106 | 6.20e-16 | 73.2 |
MS.gene30851.t1 | MTR_8g090350 | 47.368 | 76 | 37 | 1 | 64 | 136 | 112 | 187 | 9.27e-16 | 74.7 |
MS.gene30851.t1 | MTR_2g090235 | 57.627 | 59 | 25 | 0 | 64 | 122 | 217 | 275 | 9.45e-16 | 75.9 |
MS.gene30851.t1 | MTR_3g105510 | 41.860 | 86 | 46 | 1 | 65 | 146 | 37 | 122 | 1.52e-15 | 73.6 |
MS.gene30851.t1 | MTR_7g021010 | 54.688 | 64 | 28 | 1 | 58 | 120 | 43 | 106 | 1.57e-15 | 72.0 |
MS.gene30851.t1 | MTR_1g074310 | 59.649 | 57 | 22 | 1 | 65 | 120 | 21 | 77 | 1.58e-15 | 71.2 |
MS.gene30851.t1 | MTR_4g086220 | 58.929 | 56 | 23 | 0 | 65 | 120 | 96 | 151 | 1.89e-15 | 73.2 |
MS.gene30851.t1 | MTR_8g092460 | 53.333 | 60 | 28 | 0 | 65 | 124 | 145 | 204 | 3.16e-15 | 73.6 |
MS.gene30851.t1 | MTR_7g021010 | 53.333 | 60 | 28 | 0 | 61 | 120 | 8 | 67 | 3.50e-15 | 70.1 |
MS.gene30851.t1 | MTR_2g043030 | 40.659 | 91 | 54 | 0 | 64 | 154 | 18 | 108 | 3.53e-15 | 71.6 |
MS.gene30851.t1 | MTR_5g016750 | 55.357 | 56 | 25 | 0 | 65 | 120 | 25 | 80 | 3.60e-15 | 71.2 |
MS.gene30851.t1 | MTR_4g086165 | 43.158 | 95 | 46 | 1 | 26 | 120 | 51 | 137 | 4.25e-15 | 71.6 |
MS.gene30851.t1 | MTR_2g089170 | 58.929 | 56 | 23 | 0 | 65 | 120 | 65 | 120 | 4.25e-15 | 71.2 |
MS.gene30851.t1 | MTR_3g053690 | 56.667 | 60 | 26 | 0 | 61 | 120 | 23 | 82 | 4.29e-15 | 72.0 |
MS.gene30851.t1 | MTR_8g022820 | 43.902 | 82 | 43 | 1 | 55 | 136 | 113 | 191 | 4.59e-15 | 73.6 |
MS.gene30851.t1 | MTR_8g022820 | 43.902 | 82 | 43 | 1 | 55 | 136 | 114 | 192 | 4.75e-15 | 73.6 |
MS.gene30851.t1 | MTR_8g022820 | 43.902 | 82 | 43 | 1 | 55 | 136 | 114 | 192 | 4.75e-15 | 73.6 |
MS.gene30851.t1 | MTR_2g078680 | 58.929 | 56 | 23 | 0 | 65 | 120 | 31 | 86 | 4.78e-15 | 71.6 |
MS.gene30851.t1 | MTR_1g014800 | 51.667 | 60 | 29 | 0 | 64 | 123 | 30 | 89 | 4.79e-15 | 71.6 |
MS.gene30851.t1 | MTR_1g087920 | 47.059 | 68 | 36 | 0 | 55 | 122 | 67 | 134 | 5.08e-15 | 72.8 |
MS.gene30851.t1 | MTR_4g086160 | 57.143 | 56 | 24 | 0 | 65 | 120 | 96 | 151 | 5.64e-15 | 71.6 |
MS.gene30851.t1 | MTR_4g086190 | 57.143 | 56 | 24 | 0 | 65 | 120 | 96 | 151 | 6.69e-15 | 71.6 |
MS.gene30851.t1 | MTR_5g082950 | 60.714 | 56 | 22 | 0 | 65 | 120 | 66 | 121 | 7.42e-15 | 72.8 |
MS.gene30851.t1 | MTR_1g028560 | 42.683 | 82 | 42 | 1 | 65 | 146 | 115 | 191 | 7.84e-15 | 72.8 |
MS.gene30851.t1 | MTR_5g083330 | 49.315 | 73 | 37 | 0 | 50 | 122 | 20 | 92 | 1.16e-14 | 72.0 |
MS.gene30851.t1 | MTR_0939s0010 | 57.143 | 56 | 24 | 0 | 65 | 120 | 65 | 120 | 1.61e-14 | 70.1 |
MS.gene30851.t1 | MTR_7g092190 | 58.929 | 56 | 23 | 0 | 65 | 120 | 30 | 85 | 2.48e-14 | 70.9 |
MS.gene30851.t1 | MTR_7g028925 | 53.333 | 60 | 25 | 1 | 64 | 123 | 28 | 84 | 2.67e-14 | 66.6 |
MS.gene30851.t1 | MTR_3g105480 | 41.667 | 84 | 45 | 1 | 67 | 146 | 33 | 116 | 3.60e-14 | 69.7 |
MS.gene30851.t1 | MTR_2g438180 | 57.627 | 59 | 24 | 1 | 65 | 122 | 14 | 72 | 4.55e-14 | 67.0 |
MS.gene30851.t1 | MTR_2g015050 | 49.275 | 69 | 34 | 1 | 53 | 120 | 122 | 190 | 6.25e-14 | 69.7 |
MS.gene30851.t1 | MTR_5g009620 | 49.333 | 75 | 28 | 2 | 52 | 120 | 97 | 167 | 7.15e-14 | 69.7 |
MS.gene30851.t1 | MTR_4g078710 | 55.357 | 56 | 25 | 0 | 65 | 120 | 28 | 83 | 8.38e-14 | 68.6 |
MS.gene30851.t1 | MTR_3g090760 | 39.560 | 91 | 46 | 1 | 41 | 131 | 98 | 179 | 1.25e-13 | 69.3 |
MS.gene30851.t1 | MTR_1g048610 | 37.500 | 104 | 62 | 2 | 18 | 120 | 44 | 145 | 1.38e-13 | 68.2 |
MS.gene30851.t1 | MTR_1g070070 | 54.386 | 57 | 25 | 1 | 65 | 120 | 21 | 77 | 1.39e-13 | 66.2 |
MS.gene30851.t1 | MTR_4g100450 | 43.373 | 83 | 46 | 1 | 39 | 120 | 128 | 210 | 1.59e-13 | 68.9 |
MS.gene30851.t1 | MTR_2g014340 | 55.357 | 56 | 25 | 0 | 65 | 120 | 19 | 74 | 2.05e-13 | 67.0 |
MS.gene30851.t1 | MTR_3g106290 | 58.929 | 56 | 23 | 0 | 65 | 120 | 8 | 63 | 2.17e-13 | 66.6 |
MS.gene30851.t1 | MTR_4g008860 | 58.929 | 56 | 23 | 0 | 65 | 120 | 8 | 63 | 2.41e-13 | 66.6 |
MS.gene30851.t1 | MTR_2g043020 | 38.710 | 93 | 57 | 0 | 64 | 156 | 18 | 110 | 2.97e-13 | 66.6 |
MS.gene30851.t1 | MTR_1g074230 | 56.140 | 57 | 24 | 1 | 65 | 120 | 19 | 75 | 3.14e-13 | 65.1 |
MS.gene30851.t1 | MTR_1g074250 | 52.459 | 61 | 27 | 1 | 62 | 120 | 16 | 76 | 3.58e-13 | 64.7 |
MS.gene30851.t1 | MTR_2g043040 | 40.000 | 85 | 51 | 0 | 64 | 148 | 18 | 102 | 3.82e-13 | 66.6 |
MS.gene30851.t1 | MTR_2g014300 | 57.143 | 56 | 24 | 0 | 65 | 120 | 15 | 70 | 4.12e-13 | 65.5 |
MS.gene30851.t1 | MTR_4g114570 | 53.571 | 56 | 26 | 0 | 65 | 120 | 7 | 62 | 6.90e-13 | 65.9 |
MS.gene30851.t1 | MTR_5g085100 | 41.667 | 96 | 47 | 2 | 25 | 120 | 15 | 101 | 8.11e-13 | 66.6 |
MS.gene30851.t1 | MTR_4g100420 | 43.373 | 83 | 46 | 1 | 39 | 120 | 131 | 213 | 9.79e-13 | 66.6 |
MS.gene30851.t1 | MTR_4g010640 | 53.571 | 56 | 26 | 0 | 65 | 120 | 7 | 62 | 9.97e-13 | 65.5 |
MS.gene30851.t1 | MTR_3g072610 | 39.815 | 108 | 61 | 2 | 46 | 149 | 6 | 113 | 2.03e-12 | 64.7 |
MS.gene30851.t1 | MTR_2g016730 | 38.614 | 101 | 56 | 2 | 43 | 143 | 2 | 96 | 2.74e-12 | 65.5 |
MS.gene30851.t1 | MTR_2g103700 | 51.786 | 56 | 27 | 0 | 65 | 120 | 7 | 62 | 3.40e-12 | 63.2 |
MS.gene30851.t1 | MTR_8g099215 | 39.785 | 93 | 50 | 1 | 34 | 120 | 70 | 162 | 3.74e-12 | 64.7 |
MS.gene30851.t1 | MTR_1g090290 | 50.000 | 62 | 28 | 2 | 60 | 120 | 110 | 169 | 5.10e-12 | 63.2 |
MS.gene30851.t1 | MTR_5g085070 | 53.571 | 56 | 26 | 0 | 65 | 120 | 51 | 106 | 6.48e-12 | 63.9 |
MS.gene30851.t1 | MTR_4g054360 | 47.692 | 65 | 33 | 1 | 57 | 120 | 116 | 180 | 7.34e-12 | 63.5 |
MS.gene30851.t1 | MTR_5g075570 | 46.667 | 60 | 32 | 0 | 61 | 120 | 120 | 179 | 1.36e-11 | 63.2 |
MS.gene30851.t1 | MTR_4g088005 | 52.632 | 57 | 26 | 1 | 65 | 120 | 57 | 113 | 1.42e-11 | 60.1 |
MS.gene30851.t1 | MTR_6g012970 | 39.326 | 89 | 46 | 1 | 32 | 120 | 13 | 93 | 1.42e-11 | 63.5 |
MS.gene30851.t1 | MTR_8g069360 | 51.786 | 56 | 27 | 0 | 65 | 120 | 44 | 99 | 1.46e-11 | 63.5 |
MS.gene30851.t1 | MTR_4g054740 | 46.154 | 65 | 34 | 1 | 57 | 120 | 89 | 153 | 2.54e-11 | 61.6 |
MS.gene30851.t1 | MTR_8g006840 | 50.877 | 57 | 27 | 1 | 65 | 120 | 125 | 181 | 2.70e-11 | 61.2 |
MS.gene30851.t1 | MTR_6g029180 | 45.833 | 72 | 38 | 1 | 50 | 121 | 19 | 89 | 3.04e-11 | 62.4 |
MS.gene30851.t1 | MTR_5g032820 | 52.632 | 57 | 27 | 0 | 65 | 121 | 46 | 102 | 3.04e-11 | 62.4 |
MS.gene30851.t1 | MTR_4g100380 | 54.386 | 57 | 25 | 1 | 65 | 120 | 145 | 201 | 4.54e-11 | 61.2 |
MS.gene30851.t1 | MTR_8g032610 | 49.123 | 57 | 29 | 0 | 65 | 121 | 27 | 83 | 5.14e-11 | 61.6 |
MS.gene30851.t1 | MTR_7g085810 | 50.000 | 56 | 28 | 0 | 65 | 120 | 30 | 85 | 5.49e-11 | 61.2 |
MS.gene30851.t1 | MTR_2g015040 | 50.877 | 57 | 27 | 1 | 65 | 120 | 63 | 119 | 7.32e-11 | 58.9 |
MS.gene30851.t1 | MTR_1g070020 | 45.588 | 68 | 36 | 1 | 55 | 121 | 60 | 127 | 7.65e-11 | 60.1 |
MS.gene30851.t1 | MTR_3g095190 | 55.714 | 70 | 30 | 1 | 65 | 133 | 170 | 239 | 7.87e-11 | 61.2 |
MS.gene30851.t1 | MTR_6g041970 | 39.560 | 91 | 42 | 1 | 65 | 155 | 18 | 95 | 8.21e-11 | 57.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30851.t1 | AT4G25470 | 55.102 | 196 | 73 | 3 | 42 | 229 | 28 | 216 | 2.72e-67 | 206 |
MS.gene30851.t1 | AT4G25480 | 56.186 | 194 | 72 | 3 | 43 | 229 | 29 | 216 | 8.25e-64 | 197 |
MS.gene30851.t1 | AT5G51990 | 51.000 | 200 | 78 | 4 | 42 | 229 | 31 | 222 | 1.31e-62 | 195 |
MS.gene30851.t1 | AT4G25490 | 56.633 | 196 | 68 | 4 | 43 | 229 | 26 | 213 | 1.86e-60 | 189 |
MS.gene30851.t1 | AT1G63030 | 48.980 | 196 | 83 | 3 | 36 | 229 | 1 | 181 | 5.35e-59 | 184 |
MS.gene30851.t1 | AT1G63030 | 48.980 | 196 | 83 | 3 | 36 | 229 | 1 | 181 | 5.35e-59 | 184 |
MS.gene30851.t1 | AT1G12610 | 66.379 | 116 | 39 | 0 | 36 | 151 | 1 | 116 | 3.09e-55 | 176 |
MS.gene30851.t1 | AT5G25810 | 62.791 | 86 | 32 | 0 | 61 | 146 | 32 | 117 | 7.65e-34 | 121 |
MS.gene30851.t1 | AT5G11590 | 57.143 | 98 | 39 | 1 | 49 | 146 | 38 | 132 | 4.93e-32 | 117 |
MS.gene30851.t1 | AT4G32800 | 51.402 | 107 | 46 | 1 | 52 | 152 | 6 | 112 | 6.13e-32 | 116 |
MS.gene30851.t1 | AT2G44940 | 61.290 | 93 | 36 | 0 | 54 | 146 | 89 | 181 | 9.76e-32 | 117 |
MS.gene30851.t1 | AT2G35700 | 48.551 | 138 | 63 | 2 | 60 | 194 | 40 | 172 | 1.48e-31 | 114 |
MS.gene30851.t1 | AT3G16280 | 60.759 | 79 | 31 | 0 | 61 | 139 | 57 | 135 | 2.44e-28 | 107 |
MS.gene30851.t1 | AT4G16750 | 59.259 | 81 | 33 | 0 | 60 | 140 | 35 | 115 | 2.84e-28 | 105 |
MS.gene30851.t1 | AT3G16280 | 60.759 | 79 | 31 | 0 | 61 | 139 | 75 | 153 | 3.71e-28 | 107 |
MS.gene30851.t1 | AT1G01250 | 50.467 | 107 | 50 | 1 | 36 | 139 | 13 | 119 | 4.23e-28 | 105 |
MS.gene30851.t1 | AT2G36450 | 40.104 | 192 | 89 | 6 | 53 | 229 | 3 | 183 | 5.11e-27 | 102 |
MS.gene30851.t1 | AT3G60490 | 61.333 | 75 | 29 | 0 | 65 | 139 | 71 | 145 | 2.16e-26 | 102 |
MS.gene30851.t1 | AT2G25820 | 61.842 | 76 | 29 | 0 | 64 | 139 | 25 | 100 | 2.18e-26 | 102 |
MS.gene30851.t1 | AT5G52020 | 40.113 | 177 | 92 | 5 | 61 | 229 | 61 | 231 | 2.67e-25 | 99.4 |
MS.gene30851.t1 | AT1G71450 | 44.068 | 118 | 57 | 1 | 65 | 173 | 24 | 141 | 3.86e-22 | 90.1 |
MS.gene30851.t1 | AT2G47520 | 44.330 | 97 | 50 | 1 | 24 | 120 | 13 | 105 | 5.12e-21 | 86.7 |
MS.gene30851.t1 | AT1G77200 | 46.218 | 119 | 61 | 2 | 21 | 139 | 2 | 117 | 1.14e-19 | 84.7 |
MS.gene30851.t1 | AT1G21910 | 47.826 | 92 | 41 | 1 | 65 | 149 | 50 | 141 | 1.61e-19 | 84.0 |
MS.gene30851.t1 | AT4G13620 | 41.860 | 129 | 59 | 4 | 7 | 122 | 164 | 289 | 6.96e-19 | 84.7 |
MS.gene30851.t1 | AT3G16770 | 53.846 | 78 | 29 | 1 | 45 | 122 | 66 | 136 | 1.54e-18 | 82.0 |
MS.gene30851.t1 | AT1G33760 | 35.673 | 171 | 94 | 3 | 65 | 228 | 20 | 181 | 2.08e-18 | 80.1 |
MS.gene30851.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 60 | 122 | 27 | 88 | 2.19e-18 | 79.0 |
MS.gene30851.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 60 | 122 | 27 | 88 | 2.55e-18 | 79.0 |
MS.gene30851.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 60 | 122 | 27 | 88 | 2.55e-18 | 79.0 |
MS.gene30851.t1 | AT1G12630 | 39.791 | 191 | 80 | 7 | 61 | 229 | 15 | 192 | 1.47e-17 | 78.2 |
MS.gene30851.t1 | AT4G39780 | 57.377 | 61 | 26 | 0 | 60 | 120 | 88 | 148 | 1.59e-17 | 79.3 |
MS.gene30851.t1 | AT5G21960 | 46.429 | 84 | 45 | 0 | 63 | 146 | 5 | 88 | 1.69e-17 | 78.6 |
MS.gene30851.t1 | AT1G74930 | 44.186 | 86 | 48 | 0 | 65 | 150 | 21 | 106 | 2.41e-17 | 77.4 |
MS.gene30851.t1 | AT1G19210 | 33.544 | 158 | 87 | 2 | 65 | 222 | 12 | 151 | 2.55e-17 | 77.4 |
MS.gene30851.t1 | AT1G22190 | 59.322 | 59 | 24 | 0 | 64 | 122 | 82 | 140 | 2.98e-17 | 78.6 |
MS.gene30851.t1 | AT3G50260 | 34.646 | 127 | 71 | 3 | 65 | 191 | 21 | 135 | 5.94e-17 | 75.5 |
MS.gene30851.t1 | AT2G33710 | 49.367 | 79 | 35 | 1 | 60 | 133 | 65 | 143 | 7.16e-17 | 76.6 |
MS.gene30851.t1 | AT2G33710 | 49.367 | 79 | 35 | 1 | 60 | 133 | 65 | 143 | 7.34e-17 | 77.0 |
MS.gene30851.t1 | AT4G06746 | 51.613 | 62 | 30 | 0 | 65 | 126 | 36 | 97 | 1.10e-16 | 74.7 |
MS.gene30851.t1 | AT4G28140 | 46.914 | 81 | 38 | 1 | 47 | 122 | 120 | 200 | 1.22e-16 | 77.4 |
MS.gene30851.t1 | AT2G22200 | 57.627 | 59 | 25 | 0 | 64 | 122 | 70 | 128 | 1.48e-16 | 76.6 |
MS.gene30851.t1 | AT4G36900 | 55.000 | 60 | 27 | 0 | 61 | 120 | 26 | 85 | 2.76e-16 | 74.7 |
MS.gene30851.t1 | AT1G78080 | 57.627 | 59 | 25 | 0 | 64 | 122 | 151 | 209 | 3.94e-16 | 76.3 |
MS.gene30851.t1 | AT2G23340 | 57.143 | 56 | 24 | 0 | 65 | 120 | 28 | 83 | 4.47e-16 | 73.6 |
MS.gene30851.t1 | AT5G67190 | 55.357 | 56 | 25 | 0 | 65 | 120 | 21 | 76 | 5.71e-16 | 73.6 |
MS.gene30851.t1 | AT2G20880 | 34.586 | 133 | 80 | 2 | 41 | 173 | 165 | 290 | 6.59e-16 | 75.9 |
MS.gene30851.t1 | AT3G11020 | 54.545 | 66 | 30 | 0 | 59 | 124 | 72 | 137 | 8.56e-16 | 75.5 |
MS.gene30851.t1 | AT3G57600 | 58.929 | 56 | 23 | 0 | 65 | 120 | 28 | 83 | 1.03e-15 | 74.7 |
MS.gene30851.t1 | AT1G36060 | 59.649 | 57 | 23 | 0 | 64 | 120 | 142 | 198 | 1.13e-15 | 75.1 |
MS.gene30851.t1 | AT5G05410 | 57.627 | 59 | 25 | 0 | 65 | 123 | 79 | 137 | 1.17e-15 | 74.7 |
MS.gene30851.t1 | AT5G65130 | 44.211 | 95 | 41 | 2 | 40 | 122 | 74 | 168 | 1.34e-15 | 74.3 |
MS.gene30851.t1 | AT5G65130 | 44.211 | 95 | 41 | 2 | 40 | 122 | 76 | 170 | 1.50e-15 | 74.3 |
MS.gene30851.t1 | AT5G05410 | 58.929 | 56 | 23 | 0 | 65 | 120 | 79 | 134 | 1.65e-15 | 74.7 |
MS.gene30851.t1 | AT5G13330 | 50.685 | 73 | 31 | 2 | 61 | 133 | 37 | 104 | 5.00e-15 | 71.6 |
MS.gene30851.t1 | AT3G15210 | 58.929 | 56 | 23 | 0 | 65 | 120 | 25 | 80 | 7.20e-15 | 71.2 |
MS.gene30851.t1 | AT1G71520 | 33.333 | 147 | 72 | 5 | 59 | 193 | 8 | 140 | 8.01e-15 | 69.7 |
MS.gene30851.t1 | AT5G44210 | 57.143 | 56 | 24 | 0 | 65 | 120 | 33 | 88 | 1.51e-14 | 70.1 |
MS.gene30851.t1 | AT5G61890 | 55.000 | 60 | 25 | 1 | 61 | 120 | 88 | 145 | 1.59e-14 | 70.9 |
MS.gene30851.t1 | AT3G23230 | 56.140 | 57 | 24 | 1 | 65 | 120 | 20 | 76 | 1.78e-14 | 68.6 |
MS.gene30851.t1 | AT1G72360 | 50.000 | 66 | 30 | 1 | 55 | 120 | 18 | 80 | 1.93e-14 | 70.1 |
MS.gene30851.t1 | AT5G07580 | 39.370 | 127 | 69 | 4 | 16 | 136 | 58 | 182 | 2.47e-14 | 69.7 |
MS.gene30851.t1 | AT3G61630 | 35.211 | 142 | 80 | 3 | 65 | 196 | 105 | 244 | 2.97e-14 | 70.9 |
MS.gene30851.t1 | AT4G11140 | 39.785 | 93 | 43 | 2 | 65 | 150 | 87 | 173 | 3.50e-14 | 70.5 |
MS.gene30851.t1 | AT5G64750 | 39.394 | 99 | 54 | 2 | 75 | 173 | 195 | 287 | 3.67e-14 | 71.2 |
MS.gene30851.t1 | AT1G72360 | 50.000 | 68 | 30 | 2 | 53 | 120 | 66 | 129 | 3.90e-14 | 70.1 |
MS.gene30851.t1 | AT1G72360 | 50.000 | 68 | 30 | 2 | 53 | 120 | 68 | 131 | 3.91e-14 | 70.1 |
MS.gene30851.t1 | AT1G03800 | 35.294 | 102 | 66 | 0 | 19 | 120 | 7 | 108 | 4.22e-14 | 69.7 |
MS.gene30851.t1 | AT4G27950 | 55.357 | 56 | 25 | 0 | 65 | 120 | 118 | 173 | 4.76e-14 | 70.5 |
MS.gene30851.t1 | AT1G22810 | 39.785 | 93 | 41 | 2 | 65 | 149 | 14 | 99 | 5.17e-14 | 67.4 |
MS.gene30851.t1 | AT5G51190 | 53.846 | 65 | 29 | 1 | 57 | 120 | 64 | 128 | 5.43e-14 | 68.9 |
MS.gene30851.t1 | AT5G18450 | 55.172 | 58 | 26 | 0 | 64 | 121 | 33 | 90 | 9.16e-14 | 69.3 |
MS.gene30851.t1 | AT1G75490 | 38.835 | 103 | 62 | 1 | 34 | 135 | 10 | 112 | 9.78e-14 | 68.2 |
MS.gene30851.t1 | AT5G47230 | 54.688 | 64 | 26 | 2 | 58 | 120 | 151 | 212 | 1.01e-13 | 69.3 |
MS.gene30851.t1 | AT5G61600 | 57.377 | 61 | 23 | 2 | 61 | 120 | 86 | 144 | 1.28e-13 | 68.2 |
MS.gene30851.t1 | AT5G43410 | 53.333 | 60 | 27 | 1 | 62 | 120 | 12 | 71 | 1.68e-13 | 65.9 |
MS.gene30851.t1 | AT2G46310 | 32.576 | 132 | 82 | 3 | 65 | 193 | 99 | 226 | 2.23e-13 | 68.2 |
MS.gene30851.t1 | AT1G15360 | 55.357 | 56 | 25 | 0 | 65 | 120 | 7 | 62 | 3.16e-13 | 66.6 |
MS.gene30851.t1 | AT1G15360 | 55.357 | 56 | 25 | 0 | 65 | 120 | 7 | 62 | 3.16e-13 | 66.6 |
MS.gene30851.t1 | AT4G31060 | 50.000 | 56 | 28 | 0 | 65 | 120 | 27 | 82 | 3.73e-13 | 66.2 |
MS.gene30851.t1 | AT5G19790 | 47.436 | 78 | 37 | 2 | 46 | 122 | 5 | 79 | 3.77e-13 | 67.0 |
MS.gene30851.t1 | AT5G25390 | 53.571 | 56 | 26 | 0 | 65 | 120 | 7 | 62 | 3.86e-13 | 66.2 |
MS.gene30851.t1 | AT5G53290 | 40.909 | 88 | 51 | 1 | 34 | 121 | 95 | 181 | 4.57e-13 | 67.8 |
MS.gene30851.t1 | AT3G20310 | 52.459 | 61 | 29 | 0 | 60 | 120 | 22 | 82 | 6.11e-13 | 66.6 |
MS.gene30851.t1 | AT5G25190 | 57.143 | 56 | 24 | 0 | 65 | 120 | 8 | 63 | 9.00e-13 | 64.7 |
MS.gene30851.t1 | AT1G28360 | 57.143 | 56 | 24 | 0 | 65 | 120 | 12 | 67 | 1.29e-12 | 64.7 |
MS.gene30851.t1 | AT4G17490 | 53.125 | 64 | 27 | 2 | 58 | 120 | 132 | 193 | 1.30e-12 | 65.9 |
MS.gene30851.t1 | AT1G28370 | 53.571 | 56 | 26 | 0 | 65 | 120 | 20 | 75 | 1.34e-12 | 63.9 |
MS.gene30851.t1 | AT4G23750 | 50.877 | 57 | 28 | 0 | 65 | 121 | 122 | 178 | 2.36e-12 | 65.9 |
MS.gene30851.t1 | AT4G23750 | 50.877 | 57 | 28 | 0 | 65 | 121 | 122 | 178 | 2.36e-12 | 65.9 |
MS.gene30851.t1 | AT1G28370 | 53.571 | 56 | 26 | 0 | 65 | 120 | 58 | 113 | 2.82e-12 | 63.9 |
MS.gene30851.t1 | AT1G50640 | 55.357 | 56 | 25 | 0 | 65 | 120 | 28 | 83 | 2.91e-12 | 64.3 |
MS.gene30851.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 65 | 120 | 14 | 69 | 3.68e-12 | 64.7 |
MS.gene30851.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 65 | 120 | 14 | 69 | 3.68e-12 | 64.7 |
MS.gene30851.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 65 | 120 | 14 | 69 | 3.68e-12 | 64.7 |
MS.gene30851.t1 | AT1G12890 | 43.590 | 78 | 41 | 1 | 43 | 120 | 2 | 76 | 4.52e-12 | 63.5 |
MS.gene30851.t1 | AT5G47220 | 54.386 | 57 | 25 | 1 | 65 | 120 | 117 | 173 | 4.66e-12 | 63.9 |
MS.gene30851.t1 | AT1G77640 | 47.778 | 90 | 41 | 2 | 65 | 148 | 43 | 132 | 5.00e-12 | 63.9 |
MS.gene30851.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 65 | 120 | 72 | 127 | 5.43e-12 | 64.3 |
MS.gene30851.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 65 | 120 | 72 | 127 | 7.37e-12 | 64.3 |
MS.gene30851.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 65 | 120 | 79 | 134 | 7.85e-12 | 64.3 |
MS.gene30851.t1 | AT5G61590 | 48.276 | 87 | 42 | 2 | 51 | 136 | 95 | 179 | 2.33e-11 | 61.2 |
MS.gene30851.t1 | AT2G40350 | 44.444 | 72 | 33 | 1 | 65 | 136 | 74 | 138 | 2.95e-11 | 60.5 |
MS.gene30851.t1 | AT4G17500 | 54.386 | 57 | 25 | 1 | 65 | 120 | 148 | 204 | 3.29e-11 | 62.0 |
MS.gene30851.t1 | AT3G23240 | 48.276 | 58 | 29 | 1 | 65 | 121 | 82 | 139 | 3.64e-11 | 61.2 |
MS.gene30851.t1 | AT2G40350 | 44.444 | 72 | 33 | 1 | 65 | 136 | 67 | 131 | 3.89e-11 | 60.1 |
MS.gene30851.t1 | AT1G12980 | 53.571 | 56 | 26 | 0 | 65 | 120 | 57 | 112 | 4.85e-11 | 62.0 |
MS.gene30851.t1 | AT5G07310 | 53.125 | 64 | 28 | 1 | 61 | 124 | 90 | 151 | 5.34e-11 | 61.2 |
MS.gene30851.t1 | AT1G24590 | 52.632 | 57 | 27 | 0 | 65 | 121 | 58 | 114 | 8.01e-11 | 61.2 |
Find 72 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATGAACTCTCGGTGGAATT+TGG | 0.218037 | 6.2:+58632142 | None:intergenic |
TTCCTCCCAGCACGCTTCTT+TGG | 0.236811 | 6.2:+58632052 | None:intergenic |
GGAAGAGGAACTTAGATAAA+TGG | 0.256718 | 6.2:-58631988 | MS.gene30851:CDS |
CAAATCTTAGTCTTCTTGTT+TGG | 0.292823 | 6.2:+58631947 | None:intergenic |
GCCAGAGTTGTTGAGGAATA+TGG | 0.301561 | 6.2:-58631633 | MS.gene30851:CDS |
ACCTCTTCATCTTGAAAATC+TGG | 0.311282 | 6.2:+58631545 | None:intergenic |
GCCTGAGTGGTGGCAGGTAC+AGG | 0.317511 | 6.2:+58631812 | None:intergenic |
GACTCGCCACCCGGTATATA+GGG | 0.321867 | 6.2:-58632017 | MS.gene30851:CDS |
AGACTCGCCACCCGGTATAT+AGG | 0.350439 | 6.2:-58632018 | MS.gene30851:CDS |
CGGTGGAATTTGGAGAAAAC+TGG | 0.366649 | 6.2:+58632152 | None:intergenic |
TGCGAATTCAGAGGGCTCTC+AGG | 0.415939 | 6.2:-58632119 | MS.gene30851:CDS |
CAAACAAGAAGACTAAGATT+TGG | 0.423028 | 6.2:-58631946 | MS.gene30851:CDS |
GAAGAGGAACTTAGATAAAT+GGG | 0.434368 | 6.2:-58631987 | MS.gene30851:CDS |
TGCTGGGAGGAAGAAGTTCC+AGG | 0.438027 | 6.2:-58632041 | MS.gene30851:CDS |
ATGTCTCCTACACATAGCTT+TGG | 0.439535 | 6.2:-58631605 | MS.gene30851:CDS |
TGTCTCCTACACATAGCTTT+GGG | 0.457669 | 6.2:-58631604 | MS.gene30851:CDS |
CGCAGCAACATCATGTGCTC+GGG | 0.465490 | 6.2:+58631892 | None:intergenic |
ATACCGGGTGGCGAGTCTCC+TGG | 0.468976 | 6.2:+58632023 | None:intergenic |
TTCCTCACACCCCTATATAC+CGG | 0.471420 | 6.2:+58632007 | None:intergenic |
GGAGCAGAGTAGGACTTGTA+TGG | 0.472667 | 6.2:-58631684 | MS.gene30851:CDS |
TCGCAGCAACATCATGTGCT+CGG | 0.489406 | 6.2:+58631891 | None:intergenic |
CCTGAGTGGTGGCAGGTACA+GGG | 0.491147 | 6.2:+58631813 | None:intergenic |
ACGACTCCAAAGAAGCGTGC+TGG | 0.499803 | 6.2:-58632058 | MS.gene30851:CDS |
AGCGGCTGCACAGGCCGCAG+AGG | 0.499896 | 6.2:-58631774 | MS.gene30851:CDS |
TATATAGGGGTGTGAGGAAG+AGG | 0.500596 | 6.2:-58632003 | MS.gene30851:CDS |
CGGGCTGCCATCTCTGCTGT+CGG | 0.502616 | 6.2:+58631911 | None:intergenic |
CGACTCCAAAGAAGCGTGCT+GGG | 0.504020 | 6.2:-58632057 | MS.gene30851:CDS |
TGTTGCTGCGATGGCATTGA+GGG | 0.505227 | 6.2:-58631879 | MS.gene30851:CDS |
GGCCGCAGAGGCTTTCAGAC+CGG | 0.508268 | 6.2:-58631762 | MS.gene30851:CDS |
AAGATGAAGAGGTATCACTA+TGG | 0.512792 | 6.2:-58631535 | MS.gene30851:CDS |
GAGTAGGACTTGTATGGAAG+AGG | 0.516467 | 6.2:-58631678 | MS.gene30851:CDS |
GCCATATTCCTCAACAACTC+TGG | 0.516505 | 6.2:+58631632 | None:intergenic |
GCGAATTCAGAGGGCTCTCA+GGG | 0.519443 | 6.2:-58632118 | MS.gene30851:CDS |
TTAGTCATCGAAGTCTTGTC+CGG | 0.525341 | 6.2:+58631743 | None:intergenic |
TTGTATGGAAGAGGAAGAAG+AGG | 0.527030 | 6.2:-58631669 | MS.gene30851:CDS |
GGCTATTGCCACCTCTTCTA+CGG | 0.529658 | 6.2:-58631708 | MS.gene30851:CDS |
TGAATTCGCAAATGAACTCT+CGG | 0.541132 | 6.2:+58632132 | None:intergenic |
TAAATGGGTGTGTGAAATGA+GGG | 0.541686 | 6.2:-58631972 | MS.gene30851:CDS |
CCCTGTACCTGCCACCACTC+AGG | 0.544765 | 6.2:-58631813 | MS.gene30851:CDS |
AGTTCATTTGCGAATTCAGA+GGG | 0.549616 | 6.2:-58632127 | MS.gene30851:CDS |
AGAGTCTGCAAAGTTGAGAC+AGG | 0.553063 | 6.2:+58631847 | None:intergenic |
AGCACATGATGTTGCTGCGA+TGG | 0.555409 | 6.2:-58631888 | MS.gene30851:CDS |
GTTCCAGGAGACTCGCCACC+CGG | 0.558195 | 6.2:-58632026 | MS.gene30851:CDS |
ATGTTGCTGCGATGGCATTG+AGG | 0.567345 | 6.2:-58631880 | MS.gene30851:CDS |
CTTCTACGGAGGAGCAGAGT+AGG | 0.569439 | 6.2:-58631694 | MS.gene30851:CDS |
AGCTAACCTCACTTCCTCGT+TGG | 0.571780 | 6.2:+58632084 | None:intergenic |
AAGAAGACTAAGATTTGGCT+AGG | 0.578791 | 6.2:-58631941 | MS.gene30851:CDS |
TCCTCACACCCCTATATACC+GGG | 0.585609 | 6.2:+58632008 | None:intergenic |
ATAAATGGGTGTGTGAAATG+AGG | 0.586819 | 6.2:-58631973 | MS.gene30851:CDS |
GAGTTCATTTGCGAATTCAG+AGG | 0.592725 | 6.2:-58632128 | MS.gene30851:CDS |
TGAACATGCCAGAGTTGTTG+AGG | 0.597402 | 6.2:-58631640 | MS.gene30851:CDS |
TGATACCCAAAGCTATGTGT+AGG | 0.600852 | 6.2:+58631599 | None:intergenic |
CTGCTCCTCCGTAGAAGAGG+TGG | 0.604805 | 6.2:+58631700 | None:intergenic |
ACTCTGCTCCTCCGTAGAAG+AGG | 0.607637 | 6.2:+58631697 | None:intergenic |
CAATTTCCAACGAGGAAGTG+AGG | 0.611060 | 6.2:-58632090 | MS.gene30851:CDS |
TATTGCCACCTCTTCTACGG+AGG | 0.628091 | 6.2:-58631705 | MS.gene30851:CDS |
CAAAGTTGAGACAGGCGTAG+TGG | 0.644365 | 6.2:+58631855 | None:intergenic |
GTTGCTGCGATGGCATTGAG+GGG | 0.648611 | 6.2:-58631878 | MS.gene30851:CDS |
TCAACTTTGCAGACTCTGCG+TGG | 0.652025 | 6.2:-58631841 | MS.gene30851:CDS |
ACTCGCCACCCGGTATATAG+GGG | 0.659441 | 6.2:-58632016 | MS.gene30851:CDS |
ACCCGGTATATAGGGGTGTG+AGG | 0.669533 | 6.2:-58632009 | MS.gene30851:CDS |
GTCCGGTCTGAAAGCCTCTG+CGG | 0.672100 | 6.2:+58631760 | None:intergenic |
TGTATGGAAGAGGAAGAAGA+GGG | 0.673911 | 6.2:-58631668 | MS.gene30851:CDS |
CTCCAAAGAAGCGTGCTGGG+AGG | 0.687412 | 6.2:-58632054 | MS.gene30851:CDS |
ATTCGCAAATGAACTCTCGG+TGG | 0.692873 | 6.2:+58632135 | None:intergenic |
GAATTTGGAGAAAACTGGTG+TGG | 0.699539 | 6.2:+58632157 | None:intergenic |
GATGACTAATGACATTGACA+CGG | 0.709180 | 6.2:-58631729 | MS.gene30851:CDS |
CGAATTCAGAGGGCTCTCAG+GGG | 0.717384 | 6.2:-58632117 | MS.gene30851:CDS |
GTATGGAAGAGGAAGAAGAG+GGG | 0.733030 | 6.2:-58631667 | MS.gene30851:CDS |
ACTTTGCAGACTCTGCGTGG+CGG | 0.741409 | 6.2:-58631838 | MS.gene30851:CDS |
TCACACCCCTATATACCGGG+TGG | 0.772358 | 6.2:+58632011 | None:intergenic |
GGGGATGTCAATTTCCAACG+AGG | 0.782366 | 6.2:-58632098 | MS.gene30851:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
CAAACAAGAAGACTAAGATT+TGG | - | chr6.2:58631773-58631792 | MS.gene30851:CDS | 30.0% | |
GAAGAGGAACTTAGATAAAT+GGG | - | chr6.2:58631732-58631751 | MS.gene30851:CDS | 30.0% | |
GGCAAAAGATATACAAAAAG+CGG | - | chr6.2:58631927-58631946 | MS.gene30851:CDS | 30.0% | |
! | CAAATCTTAGTCTTCTTGTT+TGG | + | chr6.2:58631775-58631794 | None:intergenic | 30.0% |
AAGAAGACTAAGATTTGGCT+AGG | - | chr6.2:58631778-58631797 | MS.gene30851:CDS | 35.0% | |
ACCTCTTCATCTTGAAAATC+TGG | + | chr6.2:58632177-58632196 | None:intergenic | 35.0% | |
AGTTCATTTGCGAATTCAGA+GGG | - | chr6.2:58631592-58631611 | MS.gene30851:CDS | 35.0% | |
ATAAATGGGTGTGTGAAATG+AGG | - | chr6.2:58631746-58631765 | MS.gene30851:CDS | 35.0% | |
GATGACTAATGACATTGACA+CGG | - | chr6.2:58631990-58632009 | MS.gene30851:CDS | 35.0% | |
GGAAGAGGAACTTAGATAAA+TGG | - | chr6.2:58631731-58631750 | MS.gene30851:CDS | 35.0% | |
TAAATGGGTGTGTGAAATGA+GGG | - | chr6.2:58631747-58631766 | MS.gene30851:CDS | 35.0% | |
TGAATTCGCAAATGAACTCT+CGG | + | chr6.2:58631590-58631609 | None:intergenic | 35.0% | |
! | TTGTATATCTTTTGCCTGAG+TGG | + | chr6.2:58631923-58631942 | None:intergenic | 35.0% |
!! | AAGATGAAGAGGTATCACTA+TGG | - | chr6.2:58632184-58632203 | MS.gene30851:CDS | 35.0% |
!! | TCCAGATTTTCAAGATGAAG+AGG | - | chr6.2:58632173-58632192 | MS.gene30851:CDS | 35.0% |
AATGAACTCTCGGTGGAATT+TGG | + | chr6.2:58631580-58631599 | None:intergenic | 40.0% | |
ATGTCTCCTACACATAGCTT+TGG | - | chr6.2:58632114-58632133 | MS.gene30851:CDS | 40.0% | |
GAATTTGGAGAAAACTGGTG+TGG | + | chr6.2:58631565-58631584 | None:intergenic | 40.0% | |
GAGTTCATTTGCGAATTCAG+AGG | - | chr6.2:58631591-58631610 | MS.gene30851:CDS | 40.0% | |
TGATACCCAAAGCTATGTGT+AGG | + | chr6.2:58632123-58632142 | None:intergenic | 40.0% | |
TGTATGGAAGAGGAAGAAGA+GGG | - | chr6.2:58632051-58632070 | MS.gene30851:CDS | 40.0% | |
TGTCTCCTACACATAGCTTT+GGG | - | chr6.2:58632115-58632134 | MS.gene30851:CDS | 40.0% | |
TTGTATGGAAGAGGAAGAAG+AGG | - | chr6.2:58632050-58632069 | MS.gene30851:CDS | 40.0% | |
! | TATATCTTTTGCCTGAGTGG+TGG | + | chr6.2:58631920-58631939 | None:intergenic | 40.0% |
! | TTAGTCATCGAAGTCTTGTC+CGG | + | chr6.2:58631979-58631998 | None:intergenic | 40.0% |
AGAGTCTGCAAAGTTGAGAC+AGG | + | chr6.2:58631875-58631894 | None:intergenic | 45.0% | |
ATTCGCAAATGAACTCTCGG+TGG | + | chr6.2:58631587-58631606 | None:intergenic | 45.0% | |
CAATTTCCAACGAGGAAGTG+AGG | - | chr6.2:58631629-58631648 | MS.gene30851:CDS | 45.0% | |
CGGTGGAATTTGGAGAAAAC+TGG | + | chr6.2:58631570-58631589 | None:intergenic | 45.0% | |
GAGTAGGACTTGTATGGAAG+AGG | - | chr6.2:58632041-58632060 | MS.gene30851:CDS | 45.0% | |
GCCAGAGTTGTTGAGGAATA+TGG | - | chr6.2:58632086-58632105 | MS.gene30851:CDS | 45.0% | |
GCCATATTCCTCAACAACTC+TGG | + | chr6.2:58632090-58632109 | None:intergenic | 45.0% | |
GTATGGAAGAGGAAGAAGAG+GGG | - | chr6.2:58632052-58632071 | MS.gene30851:CDS | 45.0% | |
TATACAAAAAGCGGCTGCAC+AGG | - | chr6.2:58631936-58631955 | MS.gene30851:CDS | 45.0% | |
TGAACATGCCAGAGTTGTTG+AGG | - | chr6.2:58632079-58632098 | MS.gene30851:CDS | 45.0% | |
TTCCTCACACCCCTATATAC+CGG | + | chr6.2:58631715-58631734 | None:intergenic | 45.0% | |
! | TATATAGGGGTGTGAGGAAG+AGG | - | chr6.2:58631716-58631735 | MS.gene30851:CDS | 45.0% |
AGCACATGATGTTGCTGCGA+TGG | - | chr6.2:58631831-58631850 | MS.gene30851:CDS | 50.0% | |
AGCTAACCTCACTTCCTCGT+TGG | + | chr6.2:58631638-58631657 | None:intergenic | 50.0% | |
ATGTTGCTGCGATGGCATTG+AGG | - | chr6.2:58631839-58631858 | MS.gene30851:CDS | 50.0% | |
CAAAGTTGAGACAGGCGTAG+TGG | + | chr6.2:58631867-58631886 | None:intergenic | 50.0% | |
GGAGCAGAGTAGGACTTGTA+TGG | - | chr6.2:58632035-58632054 | MS.gene30851:CDS | 50.0% | |
GGCTATTGCCACCTCTTCTA+CGG | - | chr6.2:58632011-58632030 | MS.gene30851:CDS | 50.0% | |
GGGGATGTCAATTTCCAACG+AGG | - | chr6.2:58631621-58631640 | MS.gene30851:CDS | 50.0% | |
TATTGCCACCTCTTCTACGG+AGG | - | chr6.2:58632014-58632033 | MS.gene30851:CDS | 50.0% | |
TCAACTTTGCAGACTCTGCG+TGG | - | chr6.2:58631878-58631897 | MS.gene30851:CDS | 50.0% | |
TCCTCACACCCCTATATACC+GGG | + | chr6.2:58631714-58631733 | None:intergenic | 50.0% | |
TCGCAGCAACATCATGTGCT+CGG | + | chr6.2:58631831-58631850 | None:intergenic | 50.0% | |
! | CACTTTTCCGACAGCAGAGA+TGG | - | chr6.2:58631801-58631820 | MS.gene30851:CDS | 50.0% |
! | TGTTGCTGCGATGGCATTGA+GGG | - | chr6.2:58631840-58631859 | MS.gene30851:CDS | 50.0% |
ACTCGCCACCCGGTATATAG+GGG | - | chr6.2:58631703-58631722 | MS.gene30851:CDS | 55.0% | |
ACTCTGCTCCTCCGTAGAAG+AGG | + | chr6.2:58632025-58632044 | None:intergenic | 55.0% | |
ACTTTGCAGACTCTGCGTGG+CGG | - | chr6.2:58631881-58631900 | MS.gene30851:CDS | 55.0% | |
AGACTCGCCACCCGGTATAT+AGG | - | chr6.2:58631701-58631720 | MS.gene30851:CDS | 55.0% | |
CGAATTCAGAGGGCTCTCAG+GGG | - | chr6.2:58631602-58631621 | MS.gene30851:CDS | 55.0% | |
CGCAGCAACATCATGTGCTC+GGG | + | chr6.2:58631830-58631849 | None:intergenic | 55.0% | |
CTTCTACGGAGGAGCAGAGT+AGG | - | chr6.2:58632025-58632044 | MS.gene30851:CDS | 55.0% | |
GACTCGCCACCCGGTATATA+GGG | - | chr6.2:58631702-58631721 | MS.gene30851:CDS | 55.0% | |
GCGAATTCAGAGGGCTCTCA+GGG | - | chr6.2:58631601-58631620 | MS.gene30851:CDS | 55.0% | |
TCACACCCCTATATACCGGG+TGG | + | chr6.2:58631711-58631730 | None:intergenic | 55.0% | |
TGCGAATTCAGAGGGCTCTC+AGG | - | chr6.2:58631600-58631619 | MS.gene30851:CDS | 55.0% | |
TGCTGGGAGGAAGAAGTTCC+AGG | - | chr6.2:58631678-58631697 | MS.gene30851:CDS | 55.0% | |
TTCCTCCCAGCACGCTTCTT+TGG | + | chr6.2:58631670-58631689 | None:intergenic | 55.0% | |
! | ACCCGGTATATAGGGGTGTG+AGG | - | chr6.2:58631710-58631729 | MS.gene30851:CDS | 55.0% |
! | ACGACTCCAAAGAAGCGTGC+TGG | - | chr6.2:58631661-58631680 | MS.gene30851:CDS | 55.0% |
! | CGACTCCAAAGAAGCGTGCT+GGG | - | chr6.2:58631662-58631681 | MS.gene30851:CDS | 55.0% |
! | GTTGCTGCGATGGCATTGAG+GGG | - | chr6.2:58631841-58631860 | MS.gene30851:CDS | 55.0% |
! | TCTTTTGCCTGAGTGGTGGC+AGG | + | chr6.2:58631916-58631935 | None:intergenic | 55.0% |
CCTGAGTGGTGGCAGGTACA+GGG | + | chr6.2:58631909-58631928 | None:intergenic | 60.0% | |
CTGCTCCTCCGTAGAAGAGG+TGG | + | chr6.2:58632022-58632041 | None:intergenic | 60.0% | |
GTCCGGTCTGAAAGCCTCTG+CGG | + | chr6.2:58631962-58631981 | None:intergenic | 60.0% | |
! | CTCCAAAGAAGCGTGCTGGG+AGG | - | chr6.2:58631665-58631684 | MS.gene30851:CDS | 60.0% |
ATACCGGGTGGCGAGTCTCC+TGG | + | chr6.2:58631699-58631718 | None:intergenic | 65.0% | |
CCCTGTACCTGCCACCACTC+AGG | - | chr6.2:58631906-58631925 | MS.gene30851:CDS | 65.0% | |
CGGGCTGCCATCTCTGCTGT+CGG | + | chr6.2:58631811-58631830 | None:intergenic | 65.0% | |
GCCTGAGTGGTGGCAGGTAC+AGG | + | chr6.2:58631910-58631929 | None:intergenic | 65.0% | |
GGCCGCAGAGGCTTTCAGAC+CGG | - | chr6.2:58631957-58631976 | MS.gene30851:CDS | 65.0% | |
GTTCCAGGAGACTCGCCACC+CGG | - | chr6.2:58631693-58631712 | MS.gene30851:CDS | 65.0% | |
AGCGGCTGCACAGGCCGCAG+AGG | - | chr6.2:58631945-58631964 | MS.gene30851:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 58631526 | 58632215 | 58631526 | ID=MS.gene30851 |
chr6.2 | mRNA | 58631526 | 58632215 | 58631526 | ID=MS.gene30851.t1;Parent=MS.gene30851 |
chr6.2 | exon | 58631526 | 58632215 | 58631526 | ID=MS.gene30851.t1.exon1;Parent=MS.gene30851.t1 |
chr6.2 | CDS | 58631526 | 58632215 | 58631526 | ID=cds.MS.gene30851.t1;Parent=MS.gene30851.t1 |
Gene Sequence |
Protein sequence |