Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86608.t1 | AGR40683.1 | 89.5 | 228 | 21 | 2 | 1 | 226 | 1 | 227 | 4.10E-107 | 397.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86608.t1 | Q9M0L0 | 57.2 | 194 | 68 | 4 | 42 | 226 | 29 | 216 | 1.2e-49 | 198.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86608.t1 | S5MAB5 | 89.5 | 228 | 21 | 2 | 1 | 226 | 1 | 227 | 3.0e-107 | 397.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene86608.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86608.t1 | MTR_6g465690 | 89.474 | 228 | 18 | 3 | 1 | 223 | 1 | 227 | 1.67e-142 | 399 |
MS.gene86608.t1 | MTR_6g466000 | 77.465 | 213 | 32 | 3 | 26 | 226 | 19 | 227 | 2.29e-113 | 323 |
MS.gene86608.t1 | MTR_6g465450 | 72.727 | 220 | 48 | 5 | 3 | 218 | 1 | 212 | 6.64e-106 | 305 |
MS.gene86608.t1 | MTR_6g465460 | 76.503 | 183 | 39 | 3 | 39 | 218 | 29 | 210 | 5.65e-100 | 291 |
MS.gene86608.t1 | MTR_6g465420 | 75.410 | 183 | 42 | 2 | 39 | 218 | 29 | 211 | 1.15e-99 | 290 |
MS.gene86608.t1 | MTR_6g465430 | 76.216 | 185 | 41 | 2 | 37 | 218 | 27 | 211 | 8.44e-99 | 288 |
MS.gene86608.t1 | MTR_6g466130 | 74.038 | 208 | 46 | 4 | 23 | 226 | 25 | 228 | 2.52e-97 | 283 |
MS.gene86608.t1 | MTR_6g465530 | 71.357 | 199 | 44 | 4 | 36 | 226 | 5 | 198 | 2.01e-92 | 270 |
MS.gene86608.t1 | MTR_6g465510 | 71.154 | 208 | 39 | 4 | 36 | 226 | 5 | 208 | 2.58e-90 | 265 |
MS.gene86608.t1 | MTR_6g465990 | 65.741 | 216 | 38 | 4 | 23 | 226 | 2 | 193 | 2.75e-84 | 249 |
MS.gene86608.t1 | MTR_6g465850 | 54.762 | 252 | 52 | 4 | 33 | 226 | 32 | 279 | 9.03e-78 | 235 |
MS.gene86608.t1 | MTR_1g101600 | 64.249 | 193 | 62 | 3 | 36 | 226 | 13 | 200 | 7.00e-77 | 230 |
MS.gene86608.t1 | MTR_6g466020 | 55.446 | 202 | 66 | 4 | 23 | 223 | 2 | 180 | 2.13e-67 | 205 |
MS.gene86608.t1 | MTR_5g010930 | 46.860 | 207 | 85 | 6 | 39 | 226 | 24 | 224 | 4.35e-54 | 173 |
MS.gene86608.t1 | MTR_5g010940 | 41.152 | 243 | 110 | 5 | 1 | 226 | 1 | 227 | 2.03e-53 | 171 |
MS.gene86608.t1 | MTR_4g102660 | 51.675 | 209 | 77 | 8 | 36 | 226 | 16 | 218 | 1.77e-52 | 169 |
MS.gene86608.t1 | MTR_5g010910 | 42.601 | 223 | 104 | 5 | 22 | 226 | 6 | 222 | 3.90e-50 | 163 |
MS.gene86608.t1 | MTR_3g110205 | 58.333 | 96 | 40 | 0 | 59 | 154 | 38 | 133 | 2.80e-33 | 119 |
MS.gene86608.t1 | MTR_8g006410 | 66.667 | 78 | 26 | 0 | 61 | 138 | 49 | 126 | 3.31e-32 | 116 |
MS.gene86608.t1 | MTR_7g046260 | 65.432 | 81 | 28 | 0 | 58 | 138 | 55 | 135 | 1.09e-31 | 116 |
MS.gene86608.t1 | MTR_7g117690 | 63.750 | 80 | 29 | 0 | 59 | 138 | 23 | 102 | 6.50e-31 | 112 |
MS.gene86608.t1 | MTR_5g012910 | 63.291 | 79 | 29 | 0 | 60 | 138 | 24 | 102 | 2.57e-30 | 110 |
MS.gene86608.t1 | MTR_2g085015 | 57.778 | 90 | 36 | 2 | 58 | 145 | 41 | 130 | 7.76e-30 | 111 |
MS.gene86608.t1 | MTR_8g013860 | 54.639 | 97 | 43 | 1 | 43 | 138 | 25 | 121 | 4.61e-29 | 108 |
MS.gene86608.t1 | MTR_2g101340 | 53.465 | 101 | 41 | 2 | 44 | 138 | 15 | 115 | 7.50e-29 | 107 |
MS.gene86608.t1 | MTR_8g102800 | 54.455 | 101 | 46 | 0 | 54 | 154 | 27 | 127 | 9.08e-29 | 108 |
MS.gene86608.t1 | MTR_6g088405 | 60.256 | 78 | 31 | 0 | 61 | 138 | 41 | 118 | 1.15e-27 | 105 |
MS.gene86608.t1 | MTR_8g027465 | 53.000 | 100 | 41 | 2 | 42 | 138 | 20 | 116 | 2.07e-27 | 103 |
MS.gene86608.t1 | MTR_4g102670 | 40.462 | 173 | 81 | 6 | 60 | 226 | 11 | 167 | 9.34e-27 | 101 |
MS.gene86608.t1 | MTR_4g100650 | 60.256 | 78 | 31 | 0 | 61 | 138 | 71 | 148 | 1.46e-25 | 100 |
MS.gene86608.t1 | MTR_6g088425 | 49.123 | 114 | 48 | 1 | 42 | 145 | 17 | 130 | 9.13e-24 | 95.5 |
MS.gene86608.t1 | MTR_4g035430 | 46.429 | 112 | 53 | 2 | 34 | 145 | 9 | 113 | 5.23e-23 | 93.2 |
MS.gene86608.t1 | MTR_1g006660 | 55.319 | 94 | 38 | 1 | 49 | 138 | 28 | 121 | 4.05e-22 | 91.7 |
MS.gene86608.t1 | MTR_5g008550 | 34.078 | 179 | 95 | 5 | 64 | 225 | 21 | 193 | 1.39e-19 | 83.2 |
MS.gene86608.t1 | MTR_5g008590 | 50.459 | 109 | 53 | 1 | 64 | 172 | 11 | 118 | 2.61e-19 | 82.4 |
MS.gene86608.t1 | MTR_2g435590 | 40.833 | 120 | 69 | 1 | 15 | 134 | 49 | 166 | 2.15e-18 | 81.6 |
MS.gene86608.t1 | MTR_1g101550 | 35.429 | 175 | 100 | 2 | 64 | 226 | 57 | 230 | 7.99e-18 | 79.3 |
MS.gene86608.t1 | MTR_1g014780 | 35.115 | 131 | 72 | 2 | 33 | 150 | 1 | 131 | 9.26e-18 | 79.3 |
MS.gene86608.t1 | MTR_5g008470 | 45.238 | 84 | 46 | 0 | 66 | 149 | 77 | 160 | 4.50e-17 | 76.3 |
MS.gene86608.t1 | MTR_1g014820 | 36.000 | 125 | 64 | 2 | 63 | 183 | 26 | 138 | 7.03e-17 | 77.4 |
MS.gene86608.t1 | MTR_3g102100 | 40.541 | 111 | 59 | 3 | 64 | 172 | 45 | 150 | 1.05e-16 | 75.1 |
MS.gene86608.t1 | MTR_3g105510 | 44.186 | 86 | 44 | 1 | 64 | 145 | 37 | 122 | 1.53e-16 | 76.3 |
MS.gene86608.t1 | MTR_5g083340 | 60.345 | 58 | 23 | 0 | 64 | 121 | 85 | 142 | 1.77e-16 | 77.8 |
MS.gene86608.t1 | MTR_2g105380 | 44.444 | 90 | 45 | 1 | 52 | 136 | 105 | 194 | 2.18e-16 | 77.4 |
MS.gene86608.t1 | MTR_1g090170 | 43.820 | 89 | 44 | 1 | 59 | 147 | 147 | 229 | 3.04e-16 | 76.3 |
MS.gene86608.t1 | MTR_8g090350 | 29.651 | 172 | 101 | 5 | 63 | 217 | 112 | 280 | 4.59e-16 | 75.5 |
MS.gene86608.t1 | MTR_1g060910 | 32.558 | 172 | 69 | 6 | 48 | 196 | 3 | 150 | 5.21e-16 | 73.2 |
MS.gene86608.t1 | MTR_1g090170 | 43.820 | 89 | 44 | 1 | 59 | 147 | 234 | 316 | 5.25e-16 | 76.3 |
MS.gene86608.t1 | MTR_2g043050 | 44.706 | 85 | 47 | 0 | 63 | 147 | 18 | 102 | 7.40e-16 | 73.9 |
MS.gene86608.t1 | MTR_5g062700 | 57.627 | 59 | 25 | 0 | 63 | 121 | 172 | 230 | 8.69e-16 | 75.5 |
MS.gene86608.t1 | MTR_3g074130 | 59.649 | 57 | 23 | 0 | 63 | 119 | 149 | 205 | 9.09e-16 | 75.5 |
MS.gene86608.t1 | MTR_1g087920 | 46.154 | 78 | 42 | 0 | 54 | 131 | 67 | 144 | 9.43e-16 | 75.1 |
MS.gene86608.t1 | MTR_1g014860 | 36.449 | 107 | 61 | 1 | 59 | 158 | 17 | 123 | 1.46e-15 | 73.2 |
MS.gene86608.t1 | MTR_1g019110 | 43.333 | 90 | 43 | 1 | 64 | 145 | 44 | 133 | 1.46e-15 | 72.4 |
MS.gene86608.t1 | MTR_2g090235 | 57.627 | 59 | 25 | 0 | 63 | 121 | 217 | 275 | 1.51e-15 | 75.1 |
MS.gene86608.t1 | MTR_7g020980 | 53.333 | 60 | 28 | 0 | 60 | 119 | 47 | 106 | 2.17e-15 | 71.6 |
MS.gene86608.t1 | MTR_7g021010 | 54.688 | 64 | 28 | 1 | 57 | 119 | 4 | 67 | 3.31e-15 | 70.1 |
MS.gene86608.t1 | MTR_7g021010 | 53.333 | 60 | 28 | 0 | 60 | 119 | 47 | 106 | 5.01e-15 | 70.9 |
MS.gene86608.t1 | MTR_5g083330 | 50.685 | 73 | 36 | 0 | 49 | 121 | 20 | 92 | 5.37e-15 | 72.8 |
MS.gene86608.t1 | MTR_4g086220 | 58.929 | 56 | 23 | 0 | 64 | 119 | 96 | 151 | 5.67e-15 | 71.6 |
MS.gene86608.t1 | MTR_3g105480 | 44.048 | 84 | 43 | 1 | 66 | 145 | 33 | 116 | 5.74e-15 | 71.6 |
MS.gene86608.t1 | MTR_1g028560 | 32.026 | 153 | 82 | 4 | 10 | 145 | 44 | 191 | 6.13e-15 | 73.2 |
MS.gene86608.t1 | MTR_3g053690 | 57.812 | 64 | 24 | 1 | 56 | 119 | 22 | 82 | 7.00e-15 | 71.2 |
MS.gene86608.t1 | MTR_2g043030 | 40.659 | 91 | 54 | 0 | 63 | 153 | 18 | 108 | 7.94e-15 | 70.9 |
MS.gene86608.t1 | MTR_5g082950 | 60.714 | 56 | 22 | 0 | 64 | 119 | 66 | 121 | 8.00e-15 | 72.4 |
MS.gene86608.t1 | MTR_1g014800 | 51.667 | 60 | 29 | 0 | 63 | 122 | 30 | 89 | 8.75e-15 | 70.9 |
MS.gene86608.t1 | MTR_2g089170 | 58.929 | 56 | 23 | 0 | 64 | 119 | 65 | 120 | 9.61e-15 | 70.1 |
MS.gene86608.t1 | MTR_8g092460 | 53.333 | 60 | 28 | 0 | 64 | 123 | 145 | 204 | 1.04e-14 | 72.0 |
MS.gene86608.t1 | MTR_8g022820 | 43.902 | 82 | 43 | 1 | 54 | 135 | 114 | 192 | 1.05e-14 | 72.4 |
MS.gene86608.t1 | MTR_8g022820 | 43.902 | 82 | 43 | 1 | 54 | 135 | 114 | 192 | 1.05e-14 | 72.4 |
MS.gene86608.t1 | MTR_8g022820 | 37.736 | 106 | 61 | 2 | 54 | 157 | 113 | 215 | 1.10e-14 | 72.4 |
MS.gene86608.t1 | MTR_5g016750 | 55.357 | 56 | 25 | 0 | 64 | 119 | 25 | 80 | 1.12e-14 | 70.1 |
MS.gene86608.t1 | MTR_2g078680 | 57.143 | 63 | 24 | 1 | 57 | 119 | 27 | 86 | 1.32e-14 | 70.1 |
MS.gene86608.t1 | MTR_4g086165 | 43.158 | 95 | 46 | 1 | 25 | 119 | 51 | 137 | 1.46e-14 | 70.1 |
MS.gene86608.t1 | MTR_4g086160 | 57.143 | 56 | 24 | 0 | 64 | 119 | 96 | 151 | 1.62e-14 | 70.5 |
MS.gene86608.t1 | MTR_4g086190 | 57.143 | 56 | 24 | 0 | 64 | 119 | 96 | 151 | 2.45e-14 | 70.1 |
MS.gene86608.t1 | MTR_7g028925 | 53.333 | 60 | 25 | 1 | 63 | 122 | 28 | 84 | 2.91e-14 | 66.6 |
MS.gene86608.t1 | MTR_0939s0010 | 57.143 | 56 | 24 | 0 | 64 | 119 | 65 | 120 | 3.02e-14 | 68.9 |
MS.gene86608.t1 | MTR_7g092190 | 58.929 | 56 | 23 | 0 | 64 | 119 | 30 | 85 | 4.15e-14 | 70.1 |
MS.gene86608.t1 | MTR_1g074310 | 57.895 | 57 | 23 | 1 | 64 | 119 | 21 | 77 | 4.98e-14 | 67.4 |
MS.gene86608.t1 | MTR_2g015050 | 50.725 | 69 | 33 | 1 | 52 | 119 | 122 | 190 | 5.35e-14 | 69.7 |
MS.gene86608.t1 | MTR_4g114570 | 47.887 | 71 | 30 | 1 | 64 | 134 | 7 | 70 | 1.09e-13 | 67.8 |
MS.gene86608.t1 | MTR_5g009620 | 41.304 | 92 | 48 | 1 | 34 | 119 | 76 | 167 | 1.16e-13 | 68.9 |
MS.gene86608.t1 | MTR_2g438180 | 57.627 | 59 | 24 | 1 | 64 | 121 | 14 | 72 | 1.53e-13 | 65.9 |
MS.gene86608.t1 | MTR_4g010640 | 55.357 | 56 | 25 | 0 | 64 | 119 | 7 | 62 | 1.92e-13 | 67.4 |
MS.gene86608.t1 | MTR_1g048610 | 38.462 | 104 | 61 | 2 | 17 | 119 | 44 | 145 | 2.53e-13 | 67.0 |
MS.gene86608.t1 | MTR_4g078710 | 55.357 | 56 | 25 | 0 | 64 | 119 | 28 | 83 | 2.61e-13 | 67.0 |
MS.gene86608.t1 | MTR_3g106290 | 58.929 | 56 | 23 | 0 | 64 | 119 | 8 | 63 | 2.63e-13 | 66.2 |
MS.gene86608.t1 | MTR_2g043020 | 29.412 | 187 | 108 | 3 | 63 | 226 | 18 | 203 | 2.88e-13 | 66.6 |
MS.gene86608.t1 | MTR_2g014340 | 49.296 | 71 | 33 | 1 | 49 | 119 | 7 | 74 | 3.00e-13 | 66.6 |
MS.gene86608.t1 | MTR_3g090760 | 40.659 | 91 | 45 | 1 | 40 | 130 | 98 | 179 | 3.16e-13 | 68.2 |
MS.gene86608.t1 | MTR_4g008860 | 58.929 | 56 | 23 | 0 | 64 | 119 | 8 | 63 | 3.25e-13 | 66.2 |
MS.gene86608.t1 | MTR_1g070070 | 54.386 | 57 | 25 | 1 | 64 | 119 | 21 | 77 | 4.31e-13 | 64.7 |
MS.gene86608.t1 | MTR_4g100450 | 42.857 | 84 | 47 | 1 | 37 | 119 | 127 | 210 | 5.07e-13 | 67.4 |
MS.gene86608.t1 | MTR_2g103700 | 53.571 | 56 | 26 | 0 | 64 | 119 | 7 | 62 | 5.92e-13 | 65.1 |
MS.gene86608.t1 | MTR_5g085100 | 41.509 | 106 | 46 | 3 | 24 | 129 | 15 | 104 | 6.25e-13 | 66.6 |
MS.gene86608.t1 | MTR_1g074230 | 56.140 | 57 | 24 | 1 | 64 | 119 | 19 | 75 | 7.39e-13 | 63.9 |
MS.gene86608.t1 | MTR_2g043040 | 40.000 | 85 | 51 | 0 | 63 | 147 | 18 | 102 | 9.95e-13 | 65.5 |
MS.gene86608.t1 | MTR_2g014300 | 57.143 | 56 | 24 | 0 | 64 | 119 | 15 | 70 | 1.04e-12 | 64.3 |
MS.gene86608.t1 | MTR_1g074250 | 52.459 | 61 | 27 | 1 | 61 | 119 | 16 | 76 | 1.34e-12 | 63.2 |
MS.gene86608.t1 | MTR_2g016730 | 48.529 | 68 | 34 | 1 | 53 | 119 | 11 | 78 | 1.42e-12 | 66.2 |
MS.gene86608.t1 | MTR_3g072610 | 47.191 | 89 | 43 | 2 | 64 | 148 | 25 | 113 | 1.66e-12 | 64.7 |
MS.gene86608.t1 | MTR_4g100420 | 47.297 | 74 | 36 | 2 | 47 | 119 | 142 | 213 | 2.01e-12 | 65.5 |
MS.gene86608.t1 | MTR_4g054360 | 49.231 | 65 | 32 | 1 | 56 | 119 | 116 | 180 | 5.51e-12 | 63.9 |
MS.gene86608.t1 | MTR_4g088005 | 36.449 | 107 | 62 | 2 | 14 | 119 | 12 | 113 | 5.54e-12 | 61.2 |
MS.gene86608.t1 | MTR_8g099215 | 26.064 | 188 | 129 | 3 | 33 | 210 | 70 | 257 | 9.04e-12 | 63.5 |
MS.gene86608.t1 | MTR_1g090290 | 50.000 | 62 | 28 | 2 | 59 | 119 | 110 | 169 | 9.81e-12 | 62.4 |
MS.gene86608.t1 | MTR_5g085070 | 48.649 | 74 | 28 | 2 | 56 | 129 | 46 | 109 | 1.25e-11 | 63.2 |
MS.gene86608.t1 | MTR_4g111915 | 45.763 | 59 | 32 | 0 | 64 | 122 | 53 | 111 | 1.51e-11 | 60.5 |
MS.gene86608.t1 | MTR_4g054740 | 47.692 | 65 | 33 | 1 | 56 | 119 | 89 | 153 | 1.72e-11 | 62.4 |
MS.gene86608.t1 | MTR_5g075570 | 46.667 | 60 | 32 | 0 | 60 | 119 | 120 | 179 | 1.88e-11 | 62.4 |
MS.gene86608.t1 | MTR_6g041970 | 40.659 | 91 | 41 | 1 | 64 | 154 | 18 | 95 | 2.05e-11 | 58.9 |
MS.gene86608.t1 | MTR_6g012970 | 39.326 | 89 | 46 | 1 | 31 | 119 | 13 | 93 | 2.17e-11 | 63.2 |
MS.gene86608.t1 | MTR_8g069360 | 51.786 | 56 | 27 | 0 | 64 | 119 | 44 | 99 | 2.54e-11 | 62.8 |
MS.gene86608.t1 | MTR_6g029180 | 45.833 | 72 | 38 | 1 | 49 | 120 | 19 | 89 | 3.96e-11 | 62.0 |
MS.gene86608.t1 | MTR_5g032820 | 52.632 | 57 | 27 | 0 | 64 | 120 | 46 | 102 | 4.91e-11 | 62.0 |
MS.gene86608.t1 | MTR_4g112490 | 45.763 | 59 | 32 | 0 | 64 | 122 | 53 | 111 | 5.60e-11 | 60.1 |
MS.gene86608.t1 | MTR_8g032610 | 49.123 | 57 | 29 | 0 | 64 | 120 | 27 | 83 | 5.98e-11 | 61.2 |
MS.gene86608.t1 | MTR_5g008540 | 45.902 | 61 | 33 | 0 | 66 | 126 | 26 | 86 | 6.12e-11 | 57.8 |
MS.gene86608.t1 | MTR_7g085810 | 50.000 | 56 | 28 | 0 | 64 | 119 | 30 | 85 | 6.35e-11 | 60.8 |
MS.gene86608.t1 | MTR_8g006840 | 50.877 | 57 | 27 | 1 | 64 | 119 | 125 | 181 | 6.60e-11 | 60.1 |
MS.gene86608.t1 | MTR_2g015040 | 50.877 | 57 | 27 | 1 | 64 | 119 | 63 | 119 | 8.93e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene86608.t1 | AT4G25470 | 56.122 | 196 | 69 | 4 | 41 | 226 | 28 | 216 | 5.01e-67 | 206 |
MS.gene86608.t1 | AT4G25480 | 57.436 | 195 | 66 | 4 | 42 | 226 | 29 | 216 | 4.85e-64 | 198 |
MS.gene86608.t1 | AT5G51990 | 52.000 | 200 | 74 | 4 | 41 | 226 | 31 | 222 | 1.64e-63 | 197 |
MS.gene86608.t1 | AT1G63030 | 50.000 | 192 | 85 | 4 | 35 | 226 | 1 | 181 | 4.73e-60 | 187 |
MS.gene86608.t1 | AT1G63030 | 50.000 | 192 | 85 | 4 | 35 | 226 | 1 | 181 | 4.73e-60 | 187 |
MS.gene86608.t1 | AT4G25490 | 56.410 | 195 | 68 | 4 | 42 | 226 | 26 | 213 | 5.24e-60 | 188 |
MS.gene86608.t1 | AT1G12610 | 67.241 | 116 | 38 | 0 | 35 | 150 | 1 | 116 | 5.34e-56 | 177 |
MS.gene86608.t1 | AT5G25810 | 59.574 | 94 | 37 | 1 | 53 | 145 | 24 | 117 | 2.94e-33 | 119 |
MS.gene86608.t1 | AT2G35700 | 48.872 | 133 | 68 | 0 | 59 | 191 | 40 | 172 | 4.90e-32 | 115 |
MS.gene86608.t1 | AT5G11590 | 50.407 | 123 | 57 | 1 | 27 | 145 | 10 | 132 | 5.41e-32 | 117 |
MS.gene86608.t1 | AT2G44940 | 55.238 | 105 | 47 | 0 | 53 | 157 | 89 | 193 | 2.12e-31 | 117 |
MS.gene86608.t1 | AT4G32800 | 51.402 | 107 | 46 | 1 | 51 | 151 | 6 | 112 | 3.38e-31 | 114 |
MS.gene86608.t1 | AT1G01250 | 51.402 | 107 | 49 | 1 | 35 | 138 | 13 | 119 | 1.73e-28 | 106 |
MS.gene86608.t1 | AT3G16280 | 60.759 | 79 | 31 | 0 | 60 | 138 | 57 | 135 | 4.02e-28 | 107 |
MS.gene86608.t1 | AT4G16750 | 50.893 | 112 | 49 | 2 | 34 | 139 | 4 | 115 | 4.61e-28 | 105 |
MS.gene86608.t1 | AT3G16280 | 60.759 | 79 | 31 | 0 | 60 | 138 | 75 | 153 | 6.10e-28 | 107 |
MS.gene86608.t1 | AT2G36450 | 41.053 | 190 | 88 | 6 | 52 | 226 | 3 | 183 | 6.22e-27 | 102 |
MS.gene86608.t1 | AT2G25820 | 61.842 | 76 | 29 | 0 | 63 | 138 | 25 | 100 | 5.72e-26 | 100 |
MS.gene86608.t1 | AT3G60490 | 61.333 | 75 | 29 | 0 | 64 | 138 | 71 | 145 | 1.00e-25 | 101 |
MS.gene86608.t1 | AT5G52020 | 41.243 | 177 | 88 | 6 | 60 | 226 | 61 | 231 | 2.27e-25 | 99.8 |
MS.gene86608.t1 | AT1G71450 | 36.364 | 165 | 96 | 3 | 64 | 225 | 24 | 182 | 3.87e-23 | 92.4 |
MS.gene86608.t1 | AT2G47520 | 45.361 | 97 | 49 | 1 | 23 | 119 | 13 | 105 | 3.16e-21 | 87.0 |
MS.gene86608.t1 | AT1G33760 | 36.686 | 169 | 93 | 3 | 64 | 225 | 20 | 181 | 2.64e-20 | 85.1 |
MS.gene86608.t1 | AT1G21910 | 47.826 | 92 | 41 | 1 | 64 | 148 | 50 | 141 | 2.86e-19 | 83.6 |
MS.gene86608.t1 | AT1G77200 | 47.222 | 108 | 56 | 1 | 31 | 138 | 11 | 117 | 3.85e-19 | 83.2 |
MS.gene86608.t1 | AT1G12630 | 39.572 | 187 | 84 | 6 | 60 | 226 | 15 | 192 | 2.45e-18 | 80.1 |
MS.gene86608.t1 | AT4G13620 | 52.564 | 78 | 36 | 1 | 45 | 121 | 212 | 289 | 2.78e-18 | 82.8 |
MS.gene86608.t1 | AT1G22190 | 41.964 | 112 | 50 | 2 | 10 | 121 | 44 | 140 | 4.85e-18 | 80.5 |
MS.gene86608.t1 | AT3G16770 | 53.846 | 78 | 29 | 1 | 44 | 121 | 66 | 136 | 6.37e-18 | 80.1 |
MS.gene86608.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 59 | 121 | 27 | 88 | 7.71e-18 | 77.4 |
MS.gene86608.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 59 | 121 | 27 | 88 | 9.33e-18 | 77.4 |
MS.gene86608.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 59 | 121 | 27 | 88 | 9.33e-18 | 77.4 |
MS.gene86608.t1 | AT4G39780 | 57.377 | 61 | 26 | 0 | 59 | 119 | 88 | 148 | 2.06e-17 | 79.0 |
MS.gene86608.t1 | AT5G21960 | 46.429 | 84 | 45 | 0 | 62 | 145 | 5 | 88 | 5.45e-17 | 77.0 |
MS.gene86608.t1 | AT1G19210 | 32.667 | 150 | 94 | 3 | 64 | 212 | 12 | 155 | 1.00e-16 | 75.5 |
MS.gene86608.t1 | AT1G74930 | 43.023 | 86 | 49 | 0 | 64 | 149 | 21 | 106 | 1.04e-16 | 75.9 |
MS.gene86608.t1 | AT5G65130 | 38.462 | 130 | 66 | 4 | 4 | 121 | 43 | 170 | 1.40e-16 | 77.0 |
MS.gene86608.t1 | AT5G65130 | 38.462 | 130 | 66 | 4 | 4 | 121 | 41 | 168 | 1.60e-16 | 76.6 |
MS.gene86608.t1 | AT2G22200 | 59.649 | 57 | 23 | 0 | 63 | 119 | 70 | 126 | 3.09e-16 | 75.9 |
MS.gene86608.t1 | AT4G06746 | 51.613 | 62 | 30 | 0 | 64 | 125 | 36 | 97 | 4.39e-16 | 73.2 |
MS.gene86608.t1 | AT1G78080 | 57.627 | 59 | 25 | 0 | 63 | 121 | 151 | 209 | 5.92e-16 | 75.9 |
MS.gene86608.t1 | AT4G36900 | 45.679 | 81 | 43 | 1 | 39 | 119 | 6 | 85 | 8.49e-16 | 73.2 |
MS.gene86608.t1 | AT3G50260 | 34.074 | 135 | 75 | 4 | 56 | 188 | 13 | 135 | 9.04e-16 | 72.4 |
MS.gene86608.t1 | AT3G11020 | 54.545 | 66 | 30 | 0 | 58 | 123 | 72 | 137 | 1.21e-15 | 75.1 |
MS.gene86608.t1 | AT2G20880 | 47.500 | 80 | 40 | 1 | 40 | 119 | 165 | 242 | 1.22e-15 | 75.1 |
MS.gene86608.t1 | AT1G71520 | 34.532 | 139 | 79 | 4 | 58 | 190 | 8 | 140 | 1.28e-15 | 71.6 |
MS.gene86608.t1 | AT5G67190 | 55.357 | 56 | 25 | 0 | 64 | 119 | 21 | 76 | 1.66e-15 | 72.4 |
MS.gene86608.t1 | AT2G23340 | 57.143 | 56 | 24 | 0 | 64 | 119 | 28 | 83 | 1.69e-15 | 72.0 |
MS.gene86608.t1 | AT1G36060 | 59.649 | 57 | 23 | 0 | 63 | 119 | 142 | 198 | 1.99e-15 | 74.3 |
MS.gene86608.t1 | AT2G33710 | 47.500 | 80 | 37 | 1 | 59 | 133 | 65 | 144 | 2.37e-15 | 72.4 |
MS.gene86608.t1 | AT2G33710 | 55.738 | 61 | 27 | 0 | 59 | 119 | 65 | 125 | 2.50e-15 | 72.8 |
MS.gene86608.t1 | AT5G05410 | 58.929 | 56 | 23 | 0 | 64 | 119 | 79 | 134 | 3.49e-15 | 73.6 |
MS.gene86608.t1 | AT3G61630 | 34.286 | 140 | 82 | 2 | 64 | 193 | 105 | 244 | 3.93e-15 | 73.2 |
MS.gene86608.t1 | AT5G07580 | 40.945 | 127 | 67 | 4 | 15 | 135 | 58 | 182 | 4.21e-15 | 71.6 |
MS.gene86608.t1 | AT5G05410 | 58.929 | 56 | 23 | 0 | 64 | 119 | 79 | 134 | 4.28e-15 | 73.6 |
MS.gene86608.t1 | AT4G28140 | 54.237 | 59 | 27 | 0 | 63 | 121 | 142 | 200 | 4.45e-15 | 72.8 |
MS.gene86608.t1 | AT5G13330 | 50.685 | 73 | 31 | 2 | 60 | 132 | 37 | 104 | 1.12e-14 | 70.5 |
MS.gene86608.t1 | AT3G15210 | 57.143 | 63 | 24 | 1 | 57 | 119 | 21 | 80 | 1.78e-14 | 70.1 |
MS.gene86608.t1 | AT3G57600 | 57.143 | 56 | 24 | 0 | 64 | 119 | 28 | 83 | 2.16e-14 | 70.9 |
MS.gene86608.t1 | AT1G72360 | 40.000 | 85 | 51 | 0 | 35 | 119 | 45 | 129 | 2.40e-14 | 70.5 |
MS.gene86608.t1 | AT5G61890 | 55.000 | 60 | 25 | 1 | 60 | 119 | 88 | 145 | 2.85e-14 | 70.1 |
MS.gene86608.t1 | AT5G61600 | 59.016 | 61 | 22 | 2 | 60 | 119 | 86 | 144 | 4.58e-14 | 69.3 |
MS.gene86608.t1 | AT5G44210 | 57.143 | 56 | 24 | 0 | 64 | 119 | 33 | 88 | 5.59e-14 | 68.6 |
MS.gene86608.t1 | AT1G15360 | 57.143 | 56 | 24 | 0 | 64 | 119 | 7 | 62 | 5.73e-14 | 68.6 |
MS.gene86608.t1 | AT1G15360 | 57.143 | 56 | 24 | 0 | 64 | 119 | 7 | 62 | 5.73e-14 | 68.6 |
MS.gene86608.t1 | AT1G22810 | 39.785 | 93 | 41 | 2 | 64 | 148 | 14 | 99 | 6.55e-14 | 67.0 |
MS.gene86608.t1 | AT1G03800 | 41.489 | 94 | 49 | 2 | 29 | 119 | 18 | 108 | 7.27e-14 | 68.9 |
MS.gene86608.t1 | AT5G47230 | 32.680 | 153 | 91 | 5 | 57 | 204 | 151 | 296 | 7.73e-14 | 69.7 |
MS.gene86608.t1 | AT1G72360 | 47.619 | 63 | 33 | 0 | 57 | 119 | 18 | 80 | 9.06e-14 | 68.2 |
MS.gene86608.t1 | AT5G64750 | 48.571 | 70 | 35 | 1 | 74 | 143 | 195 | 263 | 1.13e-13 | 69.7 |
MS.gene86608.t1 | AT5G51190 | 55.556 | 63 | 25 | 2 | 58 | 119 | 68 | 128 | 1.21e-13 | 67.8 |
MS.gene86608.t1 | AT4G27950 | 54.386 | 57 | 26 | 0 | 64 | 120 | 118 | 174 | 1.38e-13 | 69.3 |
MS.gene86608.t1 | AT4G11140 | 39.785 | 93 | 43 | 2 | 64 | 149 | 87 | 173 | 1.57e-13 | 68.6 |
MS.gene86608.t1 | AT1G75490 | 38.835 | 103 | 62 | 1 | 33 | 134 | 10 | 112 | 1.72e-13 | 67.4 |
MS.gene86608.t1 | AT1G72360 | 47.619 | 63 | 33 | 0 | 57 | 119 | 69 | 131 | 2.13e-13 | 67.8 |
MS.gene86608.t1 | AT5G43410 | 53.333 | 60 | 27 | 1 | 61 | 119 | 12 | 71 | 2.29e-13 | 65.1 |
MS.gene86608.t1 | AT5G19790 | 47.436 | 78 | 37 | 2 | 45 | 121 | 5 | 79 | 3.05e-13 | 67.4 |
MS.gene86608.t1 | AT4G31060 | 30.061 | 163 | 102 | 4 | 54 | 213 | 22 | 175 | 4.75e-13 | 65.9 |
MS.gene86608.t1 | AT5G25390 | 53.571 | 56 | 26 | 0 | 64 | 119 | 7 | 62 | 5.07e-13 | 65.9 |
MS.gene86608.t1 | AT3G23230 | 54.386 | 57 | 25 | 1 | 64 | 119 | 20 | 76 | 7.21e-13 | 63.9 |
MS.gene86608.t1 | AT5G53290 | 40.909 | 88 | 51 | 1 | 33 | 120 | 95 | 181 | 1.06e-12 | 66.6 |
MS.gene86608.t1 | AT5G25190 | 57.143 | 56 | 24 | 0 | 64 | 119 | 8 | 63 | 1.30e-12 | 64.3 |
MS.gene86608.t1 | AT5G18450 | 53.448 | 58 | 27 | 0 | 63 | 120 | 33 | 90 | 1.46e-12 | 65.9 |
MS.gene86608.t1 | AT3G20310 | 51.613 | 62 | 30 | 0 | 58 | 119 | 21 | 82 | 1.58e-12 | 65.1 |
MS.gene86608.t1 | AT1G28360 | 57.143 | 56 | 24 | 0 | 64 | 119 | 12 | 67 | 2.16e-12 | 63.9 |
MS.gene86608.t1 | AT1G28370 | 53.571 | 56 | 26 | 0 | 64 | 119 | 20 | 75 | 4.20e-12 | 62.8 |
MS.gene86608.t1 | AT1G77640 | 48.889 | 90 | 40 | 2 | 64 | 147 | 43 | 132 | 4.90e-12 | 63.9 |
MS.gene86608.t1 | AT4G17490 | 53.125 | 64 | 27 | 2 | 57 | 119 | 132 | 193 | 5.02e-12 | 64.3 |
MS.gene86608.t1 | AT4G23750 | 50.877 | 57 | 28 | 0 | 64 | 120 | 122 | 178 | 5.49e-12 | 64.7 |
MS.gene86608.t1 | AT4G23750 | 50.877 | 57 | 28 | 0 | 64 | 120 | 122 | 178 | 5.49e-12 | 64.7 |
MS.gene86608.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 64 | 119 | 14 | 69 | 5.91e-12 | 63.9 |
MS.gene86608.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 64 | 119 | 14 | 69 | 5.91e-12 | 63.9 |
MS.gene86608.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 64 | 119 | 14 | 69 | 5.91e-12 | 63.9 |
MS.gene86608.t1 | AT1G28370 | 53.571 | 56 | 26 | 0 | 64 | 119 | 58 | 113 | 7.86e-12 | 62.8 |
MS.gene86608.t1 | AT2G40340 | 29.487 | 156 | 75 | 4 | 64 | 209 | 72 | 202 | 8.19e-12 | 63.9 |
MS.gene86608.t1 | AT1G50640 | 53.968 | 63 | 26 | 1 | 57 | 119 | 24 | 83 | 8.87e-12 | 62.8 |
MS.gene86608.t1 | AT5G47220 | 54.386 | 57 | 25 | 1 | 64 | 119 | 117 | 173 | 9.87e-12 | 63.2 |
MS.gene86608.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 64 | 119 | 72 | 127 | 1.15e-11 | 63.5 |
MS.gene86608.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 64 | 119 | 79 | 134 | 1.38e-11 | 63.5 |
MS.gene86608.t1 | AT5G61590 | 48.352 | 91 | 44 | 2 | 46 | 135 | 91 | 179 | 1.69e-11 | 61.6 |
MS.gene86608.t1 | AT1G12890 | 42.308 | 78 | 42 | 1 | 42 | 119 | 2 | 76 | 1.97e-11 | 62.0 |
MS.gene86608.t1 | AT2G46310 | 50.000 | 56 | 28 | 0 | 64 | 119 | 99 | 154 | 2.45e-11 | 62.4 |
MS.gene86608.t1 | AT2G40350 | 44.444 | 72 | 33 | 1 | 64 | 135 | 74 | 138 | 4.02e-11 | 60.1 |
MS.gene86608.t1 | AT2G40350 | 44.444 | 72 | 33 | 1 | 64 | 135 | 67 | 131 | 4.42e-11 | 59.7 |
MS.gene86608.t1 | AT5G25390 | 51.786 | 56 | 24 | 1 | 64 | 119 | 7 | 59 | 6.81e-11 | 59.7 |
MS.gene86608.t1 | AT4G17500 | 54.386 | 57 | 25 | 1 | 64 | 119 | 148 | 204 | 8.11e-11 | 60.8 |
MS.gene86608.t1 | AT3G23240 | 48.276 | 58 | 29 | 1 | 64 | 120 | 82 | 139 | 8.39e-11 | 60.1 |
MS.gene86608.t1 | AT5G07310 | 53.125 | 64 | 28 | 1 | 60 | 123 | 90 | 151 | 9.20e-11 | 60.5 |
Find 76 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCTCCCTGCACGCTTCTT+TGG | 0.216980 | 6.1:-50694024 | None:intergenic |
AATGAACTCTCGGAGGAATT+TGG | 0.252896 | 6.1:-50693934 | None:intergenic |
CAAATCTTAGTCTTCTTGTT+TGG | 0.292823 | 6.1:-50694129 | None:intergenic |
ATGTTGCTGCGATGGCATTA+AGG | 0.297537 | 6.1:+50694196 | MS.gene86608:CDS |
GCCAGAGTTGTTGAGGAATA+TGG | 0.301561 | 6.1:+50694437 | MS.gene86608:CDS |
ACCTCTTCATCTTGAAAATC+TGG | 0.311282 | 6.1:-50694525 | None:intergenic |
GCCTGAGTGGTGGCAGGTAT+AGG | 0.319307 | 6.1:-50694264 | None:intergenic |
CCTGAGTGGTGGCAGGTATA+GGG | 0.352227 | 6.1:-50694263 | None:intergenic |
ATGTGCCCGGGCTGCCATCT+CGG | 0.400727 | 6.1:-50694172 | None:intergenic |
AGACTCGCCACCCGGTATAC+AGG | 0.404494 | 6.1:+50694058 | MS.gene86608:CDS |
AACTGCCGAGATGGCAGCCC+GGG | 0.407631 | 6.1:+50694167 | MS.gene86608:CDS |
TGTGGATAGGAAGAGTTATT+AGG | 0.414097 | 6.1:-50693901 | None:intergenic |
TGCGAATTCAGAGGGCTCTC+AGG | 0.415939 | 6.1:+50693957 | MS.gene86608:CDS |
CAAACAAGAAGACTAAGATT+TGG | 0.423028 | 6.1:+50694130 | MS.gene86608:CDS |
TTCCTCACACCCCTGTATAC+CGG | 0.428874 | 6.1:-50694069 | None:intergenic |
ATGTCTCCTACACATAGCTT+TGG | 0.439535 | 6.1:+50694465 | MS.gene86608:CDS |
TGTCTCCTACACATAGCTTT+GGG | 0.457669 | 6.1:+50694466 | MS.gene86608:CDS |
CTCGGAGGAATTTGGAGAAA+GGG | 0.460487 | 6.1:-50693926 | None:intergenic |
AGCTGCTGCACAGGCCGCAG+AGG | 0.462612 | 6.1:+50694302 | MS.gene86608:CDS |
TCGCAGCAACATCATGTGCC+CGG | 0.465642 | 6.1:-50694185 | None:intergenic |
GGAAGAGGAACATAGACAAA+TGG | 0.472354 | 6.1:+50694088 | MS.gene86608:CDS |
GGAGCAGAGTAGGACTTGTA+TGG | 0.472667 | 6.1:+50694386 | MS.gene86608:CDS |
CGGGCTGCCATCTCGGCAGT+TGG | 0.488790 | 6.1:-50694165 | None:intergenic |
TCCTCACACCCCTGTATACC+GGG | 0.496269 | 6.1:-50694068 | None:intergenic |
TGTTGCTGCGATGGCATTAA+GGG | 0.496379 | 6.1:+50694197 | MS.gene86608:CDS |
TATACAGGGGTGTGAGGAAG+AGG | 0.502437 | 6.1:+50694073 | MS.gene86608:CDS |
GGCCGCAGAGGCTTTCAGAC+CGG | 0.508268 | 6.1:+50694314 | MS.gene86608:CDS |
CGCAGCAACATCATGTGCCC+GGG | 0.510443 | 6.1:-50694184 | None:intergenic |
AAGATGAAGAGGTATCACTA+TGG | 0.512792 | 6.1:+50694535 | MS.gene86608:CDS |
GAGTAGGACTTGTATGGAAG+AGG | 0.516467 | 6.1:+50694392 | MS.gene86608:CDS |
GCCATATTCCTCAACAACTC+TGG | 0.516505 | 6.1:-50694438 | None:intergenic |
GCGAATTCAGAGGGCTCTCA+GGG | 0.519443 | 6.1:+50693958 | MS.gene86608:CDS |
ACGACTCCAAAGAAGCGTGC+AGG | 0.519720 | 6.1:+50694018 | MS.gene86608:CDS |
CAACTGCCGAGATGGCAGCC+CGG | 0.522483 | 6.1:+50694166 | MS.gene86608:CDS |
GGCACATGATGTTGCTGCGA+TGG | 0.523213 | 6.1:+50694188 | MS.gene86608:CDS |
TTAGTCATCGAAGTCTTGTC+CGG | 0.525341 | 6.1:-50694333 | None:intergenic |
GAAGAGGAACATAGACAAAT+GGG | 0.527875 | 6.1:+50694089 | MS.gene86608:CDS |
GACTCGCCACCCGGTATACA+GGG | 0.529452 | 6.1:+50694059 | MS.gene86608:CDS |
TCTCGGAGGAATTTGGAGAA+AGG | 0.533344 | 6.1:-50693927 | None:intergenic |
TGAATTCGCAAATGAACTCT+CGG | 0.538349 | 6.1:-50693944 | None:intergenic |
GGAGTCTGCAAAGTTGAGAC+AGG | 0.548191 | 6.1:-50694229 | None:intergenic |
AGTTCATTTGCGAATTCAGA+GGG | 0.549616 | 6.1:+50693949 | MS.gene86608:CDS |
TTGTATGGAAGAGGAAGAAG+AGG | 0.552825 | 6.1:+50694401 | MS.gene86608:CDS |
GTTCAAGGAGACTCGCCACC+CGG | 0.558195 | 6.1:+50694050 | MS.gene86608:CDS |
CGACTCCAAAGAAGCGTGCA+GGG | 0.565965 | 6.1:+50694019 | MS.gene86608:CDS |
TGCAGGGAGGAAGAAGTTCA+AGG | 0.566465 | 6.1:+50694035 | MS.gene86608:CDS |
CCCTATACCTGCCACCACTC+AGG | 0.567783 | 6.1:+50694263 | MS.gene86608:CDS |
CCACTACGGAGGAGCAGAGT+AGG | 0.568284 | 6.1:+50694376 | MS.gene86608:CDS |
AGCTAACCTCACTTCCTCGT+TGG | 0.571780 | 6.1:-50693992 | None:intergenic |
CAAATGGGTGTGTGAAATGA+GGG | 0.573881 | 6.1:+50694104 | MS.gene86608:CDS |
AAGAAGACTAAGATTTGGCT+AGG | 0.578791 | 6.1:+50694135 | MS.gene86608:CDS |
ACAAATGGGTGTGTGAAATG+AGG | 0.584388 | 6.1:+50694103 | MS.gene86608:CDS |
GAGTTCATTTGCGAATTCAG+AGG | 0.592725 | 6.1:+50693948 | MS.gene86608:CDS |
TGAACATGCCAGAGTTGTTG+AGG | 0.595940 | 6.1:+50694430 | MS.gene86608:CDS |
TGACACGGCTATTGCCACTA+CGG | 0.599791 | 6.1:+50694362 | MS.gene86608:CDS |
TCATACCCAAAGCTATGTGT+AGG | 0.603291 | 6.1:-50694471 | None:intergenic |
CAATTTCCAACGAGGAAGTG+AGG | 0.611060 | 6.1:+50693986 | MS.gene86608:CDS |
TCGGAGGAATTTGGAGAAAG+GGG | 0.615781 | 6.1:-50693925 | None:intergenic |
ACCCGGTATACAGGGGTGTG+AGG | 0.624934 | 6.1:+50694067 | MS.gene86608:CDS |
CCTACTCTGCTCCTCCGTAG+TGG | 0.628033 | 6.1:-50694376 | None:intergenic |
TGTATGGAAGAGGAAGAAGA+GGG | 0.637572 | 6.1:+50694402 | MS.gene86608:CDS |
TATGGAAGAGGAAGAAGAGG+GGG | 0.662829 | 6.1:+50694404 | MS.gene86608:CDS |
CGGAGGAATTTGGAGAAAGG+GGG | 0.663054 | 6.1:-50693924 | None:intergenic |
TCAACTTTGCAGACTCCGCG+TGG | 0.671197 | 6.1:+50694235 | MS.gene86608:CDS |
GTCCGGTCTGAAAGCCTCTG+CGG | 0.672100 | 6.1:-50694316 | None:intergenic |
GTTGCTGCGATGGCATTAAG+GGG | 0.678204 | 6.1:+50694198 | MS.gene86608:CDS |
CACGGCTATTGCCACTACGG+AGG | 0.684552 | 6.1:+50694365 | MS.gene86608:CDS |
ACTCGCCACCCGGTATACAG+GGG | 0.698870 | 6.1:+50694060 | MS.gene86608:CDS |
GATGACTAATGACATTGACA+CGG | 0.709180 | 6.1:+50694347 | MS.gene86608:CDS |
CGAATTCAGAGGGCTCTCAG+GGG | 0.717384 | 6.1:+50693959 | MS.gene86608:CDS |
AGGTATAGGGAGACGCCACG+CGG | 0.725576 | 6.1:-50694250 | None:intergenic |
ATTCGCAAATGAACTCTCGG+AGG | 0.727426 | 6.1:-50693941 | None:intergenic |
TCACACCCCTGTATACCGGG+TGG | 0.728872 | 6.1:-50694065 | None:intergenic |
GTATGGAAGAGGAAGAAGAG+GGG | 0.730904 | 6.1:+50694403 | MS.gene86608:CDS |
CTCCAAAGAAGCGTGCAGGG+AGG | 0.735252 | 6.1:+50694022 | MS.gene86608:CDS |
GGGGATGTCAATTTCCAACG+AGG | 0.782366 | 6.1:+50693978 | MS.gene86608:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
CAAACAAGAAGACTAAGATT+TGG | + | chr6.1:50694130-50694149 | MS.gene86608:CDS | 30.0% | |
! | CAAATCTTAGTCTTCTTGTT+TGG | - | chr6.1:50694132-50694151 | None:intergenic | 30.0% |
AAGAAGACTAAGATTTGGCT+AGG | + | chr6.1:50694135-50694154 | MS.gene86608:CDS | 35.0% | |
ACCTCTTCATCTTGAAAATC+TGG | - | chr6.1:50694528-50694547 | None:intergenic | 35.0% | |
AGTTCATTTGCGAATTCAGA+GGG | + | chr6.1:50693949-50693968 | MS.gene86608:CDS | 35.0% | |
GAAGAGGAACATAGACAAAT+GGG | + | chr6.1:50694089-50694108 | MS.gene86608:CDS | 35.0% | |
GATGACTAATGACATTGACA+CGG | + | chr6.1:50694347-50694366 | MS.gene86608:CDS | 35.0% | |
TGAATTCGCAAATGAACTCT+CGG | - | chr6.1:50693947-50693966 | None:intergenic | 35.0% | |
TGTGGATAGGAAGAGTTATT+AGG | - | chr6.1:50693904-50693923 | None:intergenic | 35.0% | |
! | TTGTATATCTTTTGCCTGAG+TGG | - | chr6.1:50694280-50694299 | None:intergenic | 35.0% |
!! | AAGATGAAGAGGTATCACTA+TGG | + | chr6.1:50694535-50694554 | MS.gene86608:CDS | 35.0% |
!! | TCCAGATTTTCAAGATGAAG+AGG | + | chr6.1:50694524-50694543 | MS.gene86608:CDS | 35.0% |
AATGAACTCTCGGAGGAATT+TGG | - | chr6.1:50693937-50693956 | None:intergenic | 40.0% | |
ACAAATGGGTGTGTGAAATG+AGG | + | chr6.1:50694103-50694122 | MS.gene86608:CDS | 40.0% | |
ATGTCTCCTACACATAGCTT+TGG | + | chr6.1:50694465-50694484 | MS.gene86608:CDS | 40.0% | |
CAAATGGGTGTGTGAAATGA+GGG | + | chr6.1:50694104-50694123 | MS.gene86608:CDS | 40.0% | |
GAGTTCATTTGCGAATTCAG+AGG | + | chr6.1:50693948-50693967 | MS.gene86608:CDS | 40.0% | |
GGAAGAGGAACATAGACAAA+TGG | + | chr6.1:50694088-50694107 | MS.gene86608:CDS | 40.0% | |
TATACAAAAAGCTGCTGCAC+AGG | + | chr6.1:50694293-50694312 | MS.gene86608:CDS | 40.0% | |
TCATACCCAAAGCTATGTGT+AGG | - | chr6.1:50694474-50694493 | None:intergenic | 40.0% | |
TGTATGGAAGAGGAAGAAGA+GGG | + | chr6.1:50694402-50694421 | MS.gene86608:CDS | 40.0% | |
TGTCTCCTACACATAGCTTT+GGG | + | chr6.1:50694466-50694485 | MS.gene86608:CDS | 40.0% | |
TTGTATGGAAGAGGAAGAAG+AGG | + | chr6.1:50694401-50694420 | MS.gene86608:CDS | 40.0% | |
! | TATATCTTTTGCCTGAGTGG+TGG | - | chr6.1:50694277-50694296 | None:intergenic | 40.0% |
! | TTAGTCATCGAAGTCTTGTC+CGG | - | chr6.1:50694336-50694355 | None:intergenic | 40.0% |
ATGTTGCTGCGATGGCATTA+AGG | + | chr6.1:50694196-50694215 | MS.gene86608:CDS | 45.0% | |
ATTCGCAAATGAACTCTCGG+AGG | - | chr6.1:50693944-50693963 | None:intergenic | 45.0% | |
CAATTTCCAACGAGGAAGTG+AGG | + | chr6.1:50693986-50694005 | MS.gene86608:CDS | 45.0% | |
CTCGGAGGAATTTGGAGAAA+GGG | - | chr6.1:50693929-50693948 | None:intergenic | 45.0% | |
GAGTAGGACTTGTATGGAAG+AGG | + | chr6.1:50694392-50694411 | MS.gene86608:CDS | 45.0% | |
GCCAGAGTTGTTGAGGAATA+TGG | + | chr6.1:50694437-50694456 | MS.gene86608:CDS | 45.0% | |
GCCATATTCCTCAACAACTC+TGG | - | chr6.1:50694441-50694460 | None:intergenic | 45.0% | |
GTATGGAAGAGGAAGAAGAG+GGG | + | chr6.1:50694403-50694422 | MS.gene86608:CDS | 45.0% | |
TATGGAAGAGGAAGAAGAGG+GGG | + | chr6.1:50694404-50694423 | MS.gene86608:CDS | 45.0% | |
TCGGAGGAATTTGGAGAAAG+GGG | - | chr6.1:50693928-50693947 | None:intergenic | 45.0% | |
TCTCGGAGGAATTTGGAGAA+AGG | - | chr6.1:50693930-50693949 | None:intergenic | 45.0% | |
TGAACATGCCAGAGTTGTTG+AGG | + | chr6.1:50694430-50694449 | MS.gene86608:CDS | 45.0% | |
TGTTGCTGCGATGGCATTAA+GGG | + | chr6.1:50694197-50694216 | MS.gene86608:CDS | 45.0% | |
AGCTAACCTCACTTCCTCGT+TGG | - | chr6.1:50693995-50694014 | None:intergenic | 50.0% | |
CGGAGGAATTTGGAGAAAGG+GGG | - | chr6.1:50693927-50693946 | None:intergenic | 50.0% | |
GAATTTGGAGAAAGGGGGTG+TGG | - | chr6.1:50693922-50693941 | None:intergenic | 50.0% | |
GGAGCAGAGTAGGACTTGTA+TGG | + | chr6.1:50694386-50694405 | MS.gene86608:CDS | 50.0% | |
GGAGTCTGCAAAGTTGAGAC+AGG | - | chr6.1:50694232-50694251 | None:intergenic | 50.0% | |
GGGGATGTCAATTTCCAACG+AGG | + | chr6.1:50693978-50693997 | MS.gene86608:CDS | 50.0% | |
GTTGCTGCGATGGCATTAAG+GGG | + | chr6.1:50694198-50694217 | MS.gene86608:CDS | 50.0% | |
TGACACGGCTATTGCCACTA+CGG | + | chr6.1:50694362-50694381 | MS.gene86608:CDS | 50.0% | |
TGCAGGGAGGAAGAAGTTCA+AGG | + | chr6.1:50694035-50694054 | MS.gene86608:CDS | 50.0% | |
TTCCTCACACCCCTGTATAC+CGG | - | chr6.1:50694072-50694091 | None:intergenic | 50.0% | |
! | CACTTTTCCAACTGCCGAGA+TGG | + | chr6.1:50694158-50694177 | MS.gene86608:CDS | 50.0% |
! | TATACAGGGGTGTGAGGAAG+AGG | + | chr6.1:50694073-50694092 | MS.gene86608:CDS | 50.0% |
CCTGAGTGGTGGCAGGTATA+GGG | - | chr6.1:50694266-50694285 | None:intergenic | 55.0% | |
CGAATTCAGAGGGCTCTCAG+GGG | + | chr6.1:50693959-50693978 | MS.gene86608:CDS | 55.0% | |
GCGAATTCAGAGGGCTCTCA+GGG | + | chr6.1:50693958-50693977 | MS.gene86608:CDS | 55.0% | |
GGCACATGATGTTGCTGCGA+TGG | + | chr6.1:50694188-50694207 | MS.gene86608:CDS | 55.0% | |
TCAACTTTGCAGACTCCGCG+TGG | + | chr6.1:50694235-50694254 | MS.gene86608:CDS | 55.0% | |
TCCTCACACCCCTGTATACC+GGG | - | chr6.1:50694071-50694090 | None:intergenic | 55.0% | |
TCGCAGCAACATCATGTGCC+CGG | - | chr6.1:50694188-50694207 | None:intergenic | 55.0% | |
TGCGAATTCAGAGGGCTCTC+AGG | + | chr6.1:50693957-50693976 | MS.gene86608:CDS | 55.0% | |
TTCCTCCCTGCACGCTTCTT+TGG | - | chr6.1:50694027-50694046 | None:intergenic | 55.0% | |
! | ACGACTCCAAAGAAGCGTGC+AGG | + | chr6.1:50694018-50694037 | MS.gene86608:CDS | 55.0% |
! | CGACTCCAAAGAAGCGTGCA+GGG | + | chr6.1:50694019-50694038 | MS.gene86608:CDS | 55.0% |
! | TCTTTTGCCTGAGTGGTGGC+AGG | - | chr6.1:50694273-50694292 | None:intergenic | 55.0% |
! | TGGAGAAAGGGGGTGTGGAT+AGG | - | chr6.1:50693917-50693936 | None:intergenic | 55.0% |
ACTCGCCACCCGGTATACAG+GGG | + | chr6.1:50694060-50694079 | MS.gene86608:CDS | 60.0% | |
AGACTCGCCACCCGGTATAC+AGG | + | chr6.1:50694058-50694077 | MS.gene86608:CDS | 60.0% | |
AGGTATAGGGAGACGCCACG+CGG | - | chr6.1:50694253-50694272 | None:intergenic | 60.0% | |
CACGGCTATTGCCACTACGG+AGG | + | chr6.1:50694365-50694384 | MS.gene86608:CDS | 60.0% | |
CCACTACGGAGGAGCAGAGT+AGG | + | chr6.1:50694376-50694395 | MS.gene86608:CDS | 60.0% | |
CCCTATACCTGCCACCACTC+AGG | + | chr6.1:50694263-50694282 | MS.gene86608:CDS | 60.0% | |
CCTACTCTGCTCCTCCGTAG+TGG | - | chr6.1:50694379-50694398 | None:intergenic | 60.0% | |
CGCAGCAACATCATGTGCCC+GGG | - | chr6.1:50694187-50694206 | None:intergenic | 60.0% | |
GACTCGCCACCCGGTATACA+GGG | + | chr6.1:50694059-50694078 | MS.gene86608:CDS | 60.0% | |
GCCTGAGTGGTGGCAGGTAT+AGG | - | chr6.1:50694267-50694286 | None:intergenic | 60.0% | |
GTCCGGTCTGAAAGCCTCTG+CGG | - | chr6.1:50694319-50694338 | None:intergenic | 60.0% | |
GTTCAAGGAGACTCGCCACC+CGG | + | chr6.1:50694050-50694069 | MS.gene86608:CDS | 60.0% | |
TCACACCCCTGTATACCGGG+TGG | - | chr6.1:50694068-50694087 | None:intergenic | 60.0% | |
! | ACCCGGTATACAGGGGTGTG+AGG | + | chr6.1:50694067-50694086 | MS.gene86608:CDS | 60.0% |
! | CTCCAAAGAAGCGTGCAGGG+AGG | + | chr6.1:50694022-50694041 | MS.gene86608:CDS | 60.0% |
AACTGCCGAGATGGCAGCCC+GGG | + | chr6.1:50694167-50694186 | MS.gene86608:CDS | 65.0% | |
ATGTGCCCGGGCTGCCATCT+CGG | - | chr6.1:50694175-50694194 | None:intergenic | 65.0% | |
CAACTGCCGAGATGGCAGCC+CGG | + | chr6.1:50694166-50694185 | MS.gene86608:CDS | 65.0% | |
GGCCGCAGAGGCTTTCAGAC+CGG | + | chr6.1:50694314-50694333 | MS.gene86608:CDS | 65.0% | |
AGCTGCTGCACAGGCCGCAG+AGG | + | chr6.1:50694302-50694321 | MS.gene86608:CDS | 70.0% | |
CGGGCTGCCATCTCGGCAGT+TGG | - | chr6.1:50694168-50694187 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 50693886 | 50694566 | 50693886 | ID=MS.gene86608 |
chr6.1 | mRNA | 50693886 | 50694566 | 50693886 | ID=MS.gene86608.t1;Parent=MS.gene86608 |
chr6.1 | exon | 50693886 | 50694566 | 50693886 | ID=MS.gene86608.t1.exon1;Parent=MS.gene86608.t1 |
chr6.1 | CDS | 50693886 | 50694566 | 50693886 | ID=cds.MS.gene86608.t1;Parent=MS.gene86608.t1 |
Gene Sequence |
Protein sequence |