Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30852.t1 | AGR40683.1 | 84.3 | 230 | 33 | 2 | 1 | 230 | 1 | 227 | 7.60E-101 | 376.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30852.t1 | Q9M0L0 | 53.2 | 216 | 82 | 5 | 22 | 230 | 13 | 216 | 9.9e-49 | 194.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30852.t1 | S5MAB5 | 84.3 | 230 | 33 | 2 | 1 | 230 | 1 | 227 | 5.5e-101 | 376.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene30852.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30852.t1 | MTR_6g465690 | 87.826 | 230 | 22 | 3 | 1 | 227 | 1 | 227 | 1.30e-140 | 394 |
MS.gene30852.t1 | MTR_6g466000 | 76.279 | 215 | 35 | 3 | 26 | 230 | 19 | 227 | 2.01e-113 | 324 |
MS.gene30852.t1 | MTR_6g465450 | 73.756 | 221 | 48 | 4 | 3 | 222 | 1 | 212 | 4.23e-110 | 316 |
MS.gene30852.t1 | MTR_6g465420 | 75.132 | 189 | 46 | 1 | 34 | 222 | 24 | 211 | 1.24e-104 | 303 |
MS.gene30852.t1 | MTR_6g465460 | 74.603 | 189 | 44 | 2 | 35 | 222 | 25 | 210 | 3.06e-103 | 300 |
MS.gene30852.t1 | MTR_6g465430 | 75.263 | 190 | 44 | 2 | 34 | 222 | 24 | 211 | 1.89e-101 | 294 |
MS.gene30852.t1 | MTR_6g466130 | 75.481 | 208 | 47 | 2 | 23 | 230 | 25 | 228 | 7.10e-101 | 292 |
MS.gene30852.t1 | MTR_6g465530 | 72.222 | 198 | 46 | 3 | 37 | 230 | 6 | 198 | 1.75e-93 | 272 |
MS.gene30852.t1 | MTR_6g465510 | 71.981 | 207 | 41 | 3 | 37 | 230 | 6 | 208 | 1.14e-92 | 271 |
MS.gene30852.t1 | MTR_6g465990 | 65.138 | 218 | 40 | 4 | 23 | 230 | 2 | 193 | 1.33e-84 | 249 |
MS.gene30852.t1 | MTR_6g465850 | 58.730 | 252 | 46 | 5 | 33 | 230 | 32 | 279 | 3.48e-78 | 236 |
MS.gene30852.t1 | MTR_1g101600 | 65.079 | 189 | 59 | 3 | 42 | 230 | 19 | 200 | 1.09e-76 | 230 |
MS.gene30852.t1 | MTR_6g466020 | 54.369 | 206 | 66 | 4 | 23 | 227 | 2 | 180 | 4.11e-67 | 205 |
MS.gene30852.t1 | MTR_5g010930 | 43.981 | 216 | 82 | 7 | 39 | 230 | 24 | 224 | 6.01e-52 | 168 |
MS.gene30852.t1 | MTR_5g010940 | 41.850 | 227 | 109 | 6 | 19 | 230 | 9 | 227 | 2.08e-50 | 164 |
MS.gene30852.t1 | MTR_4g102660 | 49.327 | 223 | 89 | 9 | 21 | 230 | 7 | 218 | 3.84e-50 | 163 |
MS.gene30852.t1 | MTR_5g010910 | 41.778 | 225 | 107 | 7 | 22 | 230 | 6 | 222 | 4.84e-48 | 158 |
MS.gene30852.t1 | MTR_3g110205 | 57.292 | 96 | 41 | 0 | 59 | 154 | 38 | 133 | 3.94e-33 | 118 |
MS.gene30852.t1 | MTR_8g006410 | 65.385 | 78 | 27 | 0 | 61 | 138 | 49 | 126 | 6.83e-32 | 115 |
MS.gene30852.t1 | MTR_7g046260 | 64.198 | 81 | 29 | 0 | 58 | 138 | 55 | 135 | 2.10e-31 | 115 |
MS.gene30852.t1 | MTR_7g117690 | 63.750 | 80 | 29 | 0 | 59 | 138 | 23 | 102 | 6.13e-31 | 112 |
MS.gene30852.t1 | MTR_2g085015 | 40.964 | 166 | 73 | 6 | 58 | 200 | 41 | 204 | 7.21e-31 | 114 |
MS.gene30852.t1 | MTR_5g012910 | 62.025 | 79 | 30 | 0 | 60 | 138 | 24 | 102 | 4.96e-30 | 110 |
MS.gene30852.t1 | MTR_8g013860 | 53.608 | 97 | 44 | 1 | 43 | 138 | 25 | 121 | 7.09e-29 | 108 |
MS.gene30852.t1 | MTR_8g102800 | 53.465 | 101 | 47 | 0 | 54 | 154 | 27 | 127 | 2.63e-28 | 107 |
MS.gene30852.t1 | MTR_2g101340 | 51.485 | 101 | 43 | 2 | 44 | 138 | 15 | 115 | 4.70e-28 | 105 |
MS.gene30852.t1 | MTR_6g088405 | 58.974 | 78 | 32 | 0 | 61 | 138 | 41 | 118 | 2.24e-27 | 104 |
MS.gene30852.t1 | MTR_8g027465 | 52.000 | 100 | 42 | 2 | 42 | 138 | 20 | 116 | 3.14e-27 | 103 |
MS.gene30852.t1 | MTR_4g102670 | 40.000 | 175 | 83 | 6 | 60 | 230 | 11 | 167 | 6.29e-27 | 102 |
MS.gene30852.t1 | MTR_4g100650 | 58.974 | 78 | 32 | 0 | 61 | 138 | 71 | 148 | 2.38e-25 | 100 |
MS.gene30852.t1 | MTR_6g088425 | 48.246 | 114 | 49 | 1 | 42 | 145 | 17 | 130 | 1.05e-23 | 95.5 |
MS.gene30852.t1 | MTR_4g035430 | 47.423 | 97 | 46 | 1 | 49 | 145 | 22 | 113 | 1.79e-22 | 91.7 |
MS.gene30852.t1 | MTR_1g006660 | 59.494 | 79 | 32 | 0 | 60 | 138 | 43 | 121 | 5.92e-22 | 91.3 |
MS.gene30852.t1 | MTR_5g008590 | 36.667 | 180 | 96 | 4 | 64 | 229 | 11 | 186 | 1.18e-19 | 83.6 |
MS.gene30852.t1 | MTR_5g008550 | 46.000 | 100 | 52 | 1 | 64 | 161 | 21 | 120 | 2.61e-19 | 82.8 |
MS.gene30852.t1 | MTR_1g014780 | 36.975 | 119 | 67 | 2 | 63 | 174 | 37 | 154 | 5.40e-18 | 80.1 |
MS.gene30852.t1 | MTR_1g101550 | 37.143 | 175 | 101 | 3 | 64 | 230 | 57 | 230 | 1.25e-17 | 79.0 |
MS.gene30852.t1 | MTR_2g435590 | 37.008 | 127 | 78 | 1 | 8 | 134 | 42 | 166 | 3.01e-17 | 78.6 |
MS.gene30852.t1 | MTR_5g008470 | 44.048 | 84 | 47 | 0 | 66 | 149 | 77 | 160 | 6.21e-17 | 76.3 |
MS.gene30852.t1 | MTR_3g105510 | 44.186 | 86 | 44 | 1 | 64 | 145 | 37 | 122 | 1.70e-16 | 76.3 |
MS.gene30852.t1 | MTR_3g102100 | 58.929 | 56 | 23 | 0 | 64 | 119 | 45 | 100 | 1.79e-16 | 74.7 |
MS.gene30852.t1 | MTR_1g014820 | 42.529 | 87 | 46 | 1 | 63 | 145 | 26 | 112 | 2.65e-16 | 75.9 |
MS.gene30852.t1 | MTR_1g060910 | 35.503 | 169 | 72 | 6 | 48 | 200 | 3 | 150 | 3.33e-16 | 73.9 |
MS.gene30852.t1 | MTR_5g083340 | 58.621 | 58 | 24 | 0 | 64 | 121 | 85 | 142 | 3.45e-16 | 77.0 |
MS.gene30852.t1 | MTR_2g043050 | 44.706 | 85 | 47 | 0 | 63 | 147 | 18 | 102 | 5.66e-16 | 74.3 |
MS.gene30852.t1 | MTR_1g090170 | 42.697 | 89 | 45 | 1 | 59 | 147 | 147 | 229 | 6.43e-16 | 75.5 |
MS.gene30852.t1 | MTR_1g014860 | 34.454 | 119 | 69 | 2 | 59 | 170 | 17 | 133 | 1.14e-15 | 73.6 |
MS.gene30852.t1 | MTR_1g090170 | 42.697 | 89 | 45 | 1 | 59 | 147 | 234 | 316 | 1.41e-15 | 75.1 |
MS.gene30852.t1 | MTR_1g019110 | 43.333 | 90 | 43 | 1 | 64 | 145 | 44 | 133 | 1.50e-15 | 72.4 |
MS.gene30852.t1 | MTR_2g105380 | 42.222 | 90 | 47 | 1 | 52 | 136 | 105 | 194 | 1.64e-15 | 74.7 |
MS.gene30852.t1 | MTR_7g020980 | 53.125 | 64 | 29 | 1 | 57 | 119 | 43 | 106 | 1.74e-15 | 72.0 |
MS.gene30852.t1 | MTR_5g062700 | 55.932 | 59 | 26 | 0 | 63 | 121 | 172 | 230 | 2.07e-15 | 74.7 |
MS.gene30852.t1 | MTR_3g074130 | 57.895 | 57 | 24 | 0 | 63 | 119 | 149 | 205 | 2.12e-15 | 74.3 |
MS.gene30852.t1 | MTR_8g090350 | 46.053 | 76 | 38 | 1 | 63 | 135 | 112 | 187 | 2.25e-15 | 73.9 |
MS.gene30852.t1 | MTR_1g087920 | 35.772 | 123 | 74 | 2 | 11 | 131 | 25 | 144 | 2.55e-15 | 73.9 |
MS.gene30852.t1 | MTR_8g092460 | 55.000 | 60 | 27 | 0 | 64 | 123 | 145 | 204 | 3.01e-15 | 73.6 |
MS.gene30852.t1 | MTR_2g090235 | 55.932 | 59 | 26 | 0 | 63 | 121 | 217 | 275 | 3.75e-15 | 73.9 |
MS.gene30852.t1 | MTR_7g021010 | 53.125 | 64 | 29 | 1 | 57 | 119 | 43 | 106 | 3.85e-15 | 71.2 |
MS.gene30852.t1 | MTR_3g105480 | 44.048 | 84 | 43 | 1 | 66 | 145 | 33 | 116 | 6.20e-15 | 71.6 |
MS.gene30852.t1 | MTR_2g043030 | 40.659 | 91 | 54 | 0 | 63 | 153 | 18 | 108 | 7.21e-15 | 70.9 |
MS.gene30852.t1 | MTR_7g021010 | 51.667 | 60 | 29 | 0 | 60 | 119 | 8 | 67 | 8.71e-15 | 69.3 |
MS.gene30852.t1 | MTR_1g014800 | 51.667 | 60 | 29 | 0 | 63 | 122 | 30 | 89 | 8.79e-15 | 71.2 |
MS.gene30852.t1 | MTR_4g086220 | 57.143 | 56 | 24 | 0 | 64 | 119 | 96 | 151 | 9.95e-15 | 71.2 |
MS.gene30852.t1 | MTR_5g016750 | 55.357 | 56 | 25 | 0 | 64 | 119 | 25 | 80 | 1.00e-14 | 70.1 |
MS.gene30852.t1 | MTR_1g028560 | 41.463 | 82 | 43 | 1 | 64 | 145 | 115 | 191 | 1.11e-14 | 72.4 |
MS.gene30852.t1 | MTR_5g082950 | 58.929 | 56 | 23 | 0 | 64 | 119 | 66 | 121 | 1.67e-14 | 71.6 |
MS.gene30852.t1 | MTR_3g053690 | 55.000 | 60 | 27 | 0 | 60 | 119 | 23 | 82 | 1.92e-14 | 70.1 |
MS.gene30852.t1 | MTR_2g089170 | 57.143 | 56 | 24 | 0 | 64 | 119 | 65 | 120 | 2.06e-14 | 69.3 |
MS.gene30852.t1 | MTR_2g078680 | 57.143 | 56 | 24 | 0 | 64 | 119 | 31 | 86 | 2.49e-14 | 69.7 |
MS.gene30852.t1 | MTR_4g086160 | 55.357 | 56 | 25 | 0 | 64 | 119 | 96 | 151 | 2.92e-14 | 69.7 |
MS.gene30852.t1 | MTR_4g086165 | 42.105 | 95 | 47 | 1 | 25 | 119 | 51 | 137 | 3.00e-14 | 69.3 |
MS.gene30852.t1 | MTR_5g083330 | 47.945 | 73 | 38 | 0 | 49 | 121 | 20 | 92 | 3.57e-14 | 70.5 |
MS.gene30852.t1 | MTR_4g086190 | 55.357 | 56 | 25 | 0 | 64 | 119 | 96 | 151 | 3.95e-14 | 69.3 |
MS.gene30852.t1 | MTR_1g048610 | 37.500 | 104 | 62 | 2 | 17 | 119 | 44 | 145 | 4.46e-14 | 69.3 |
MS.gene30852.t1 | MTR_7g028925 | 53.333 | 60 | 25 | 1 | 63 | 122 | 28 | 84 | 4.49e-14 | 66.2 |
MS.gene30852.t1 | MTR_8g022820 | 41.463 | 82 | 45 | 1 | 54 | 135 | 113 | 191 | 5.86e-14 | 70.5 |
MS.gene30852.t1 | MTR_8g022820 | 41.463 | 82 | 45 | 1 | 54 | 135 | 114 | 192 | 5.94e-14 | 70.5 |
MS.gene30852.t1 | MTR_8g022820 | 41.463 | 82 | 45 | 1 | 54 | 135 | 114 | 192 | 5.94e-14 | 70.5 |
MS.gene30852.t1 | MTR_0939s0010 | 55.357 | 56 | 25 | 0 | 64 | 119 | 65 | 120 | 6.97e-14 | 68.2 |
MS.gene30852.t1 | MTR_7g092190 | 57.143 | 56 | 24 | 0 | 64 | 119 | 30 | 85 | 8.51e-14 | 69.3 |
MS.gene30852.t1 | MTR_1g074310 | 56.140 | 57 | 24 | 1 | 64 | 119 | 21 | 77 | 9.53e-14 | 66.6 |
MS.gene30852.t1 | MTR_2g438180 | 55.932 | 59 | 25 | 1 | 64 | 121 | 14 | 72 | 2.25e-13 | 65.5 |
MS.gene30852.t1 | MTR_2g015050 | 47.826 | 69 | 35 | 1 | 52 | 119 | 122 | 190 | 2.72e-13 | 67.8 |
MS.gene30852.t1 | MTR_4g114570 | 46.479 | 71 | 31 | 1 | 64 | 134 | 7 | 70 | 3.20e-13 | 66.6 |
MS.gene30852.t1 | MTR_5g009620 | 48.000 | 75 | 29 | 2 | 51 | 119 | 97 | 167 | 3.50e-13 | 67.8 |
MS.gene30852.t1 | MTR_4g078710 | 53.571 | 56 | 26 | 0 | 64 | 119 | 28 | 83 | 3.99e-13 | 66.6 |
MS.gene30852.t1 | MTR_3g090760 | 39.560 | 91 | 46 | 1 | 40 | 130 | 98 | 179 | 4.87e-13 | 67.8 |
MS.gene30852.t1 | MTR_4g010640 | 53.571 | 56 | 26 | 0 | 64 | 119 | 7 | 62 | 5.17e-13 | 66.2 |
MS.gene30852.t1 | MTR_3g106290 | 57.143 | 56 | 24 | 0 | 64 | 119 | 8 | 63 | 5.40e-13 | 65.5 |
MS.gene30852.t1 | MTR_4g100450 | 42.169 | 83 | 47 | 1 | 38 | 119 | 128 | 210 | 5.40e-13 | 67.4 |
MS.gene30852.t1 | MTR_2g043020 | 38.710 | 93 | 57 | 0 | 63 | 155 | 18 | 110 | 6.01e-13 | 65.9 |
MS.gene30852.t1 | MTR_1g070070 | 52.632 | 57 | 26 | 1 | 64 | 119 | 21 | 77 | 6.27e-13 | 64.3 |
MS.gene30852.t1 | MTR_2g014340 | 53.571 | 56 | 26 | 0 | 64 | 119 | 19 | 74 | 6.74e-13 | 65.5 |
MS.gene30852.t1 | MTR_4g008860 | 57.143 | 56 | 24 | 0 | 64 | 119 | 8 | 63 | 7.77e-13 | 65.5 |
MS.gene30852.t1 | MTR_2g043040 | 40.000 | 85 | 51 | 0 | 63 | 147 | 18 | 102 | 7.91e-13 | 65.9 |
MS.gene30852.t1 | MTR_1g074230 | 54.386 | 57 | 25 | 1 | 64 | 119 | 19 | 75 | 1.39e-12 | 63.2 |
MS.gene30852.t1 | MTR_2g103700 | 51.786 | 56 | 27 | 0 | 64 | 119 | 7 | 62 | 1.50e-12 | 63.9 |
MS.gene30852.t1 | MTR_2g014300 | 55.357 | 56 | 25 | 0 | 64 | 119 | 15 | 70 | 1.73e-12 | 63.9 |
MS.gene30852.t1 | MTR_3g072610 | 40.741 | 108 | 60 | 2 | 45 | 148 | 6 | 113 | 2.23e-12 | 64.3 |
MS.gene30852.t1 | MTR_1g074250 | 50.820 | 61 | 28 | 1 | 61 | 119 | 16 | 76 | 2.25e-12 | 62.8 |
MS.gene30852.t1 | MTR_4g100420 | 42.169 | 83 | 47 | 1 | 38 | 119 | 131 | 213 | 3.25e-12 | 65.1 |
MS.gene30852.t1 | MTR_2g016730 | 43.590 | 78 | 43 | 1 | 42 | 119 | 2 | 78 | 1.04e-11 | 63.9 |
MS.gene30852.t1 | MTR_5g085100 | 38.679 | 106 | 49 | 3 | 24 | 129 | 15 | 104 | 1.43e-11 | 63.2 |
MS.gene30852.t1 | MTR_1g090290 | 48.387 | 62 | 29 | 2 | 59 | 119 | 110 | 169 | 1.74e-11 | 61.6 |
MS.gene30852.t1 | MTR_5g085070 | 48.485 | 66 | 27 | 1 | 64 | 129 | 51 | 109 | 2.44e-11 | 62.4 |
MS.gene30852.t1 | MTR_6g041970 | 39.560 | 91 | 42 | 1 | 64 | 154 | 18 | 95 | 2.72e-11 | 58.9 |
MS.gene30852.t1 | MTR_8g099215 | 38.710 | 93 | 51 | 1 | 33 | 119 | 70 | 162 | 2.89e-11 | 62.4 |
MS.gene30852.t1 | MTR_4g054360 | 46.154 | 65 | 34 | 1 | 56 | 119 | 116 | 180 | 3.73e-11 | 61.6 |
MS.gene30852.t1 | MTR_5g075570 | 45.000 | 60 | 33 | 0 | 60 | 119 | 120 | 179 | 4.32e-11 | 61.6 |
MS.gene30852.t1 | MTR_8g069360 | 50.000 | 56 | 28 | 0 | 64 | 119 | 44 | 99 | 4.58e-11 | 62.0 |
MS.gene30852.t1 | MTR_4g111915 | 44.068 | 59 | 33 | 0 | 64 | 122 | 53 | 111 | 4.63e-11 | 59.3 |
MS.gene30852.t1 | MTR_4g088005 | 39.000 | 100 | 55 | 3 | 26 | 119 | 14 | 113 | 5.60e-11 | 58.5 |
MS.gene30852.t1 | MTR_6g012970 | 38.202 | 89 | 47 | 1 | 31 | 119 | 13 | 93 | 6.37e-11 | 61.6 |
MS.gene30852.t1 | MTR_5g032820 | 50.877 | 57 | 28 | 0 | 64 | 120 | 46 | 102 | 9.89e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30852.t1 | AT4G25470 | 55.051 | 198 | 72 | 4 | 41 | 230 | 28 | 216 | 1.14e-65 | 202 |
MS.gene30852.t1 | AT4G25480 | 53.704 | 216 | 81 | 5 | 22 | 230 | 13 | 216 | 1.16e-63 | 197 |
MS.gene30852.t1 | AT5G51990 | 53.000 | 200 | 76 | 5 | 41 | 230 | 31 | 222 | 1.04e-62 | 195 |
MS.gene30852.t1 | AT4G25490 | 56.566 | 198 | 67 | 5 | 42 | 230 | 26 | 213 | 3.29e-59 | 186 |
MS.gene30852.t1 | AT1G63030 | 48.980 | 196 | 81 | 4 | 37 | 230 | 3 | 181 | 1.65e-58 | 183 |
MS.gene30852.t1 | AT1G63030 | 48.980 | 196 | 81 | 4 | 37 | 230 | 3 | 181 | 1.65e-58 | 183 |
MS.gene30852.t1 | AT1G12610 | 47.343 | 207 | 94 | 5 | 37 | 230 | 3 | 207 | 3.37e-56 | 178 |
MS.gene30852.t1 | AT5G25810 | 61.628 | 86 | 33 | 0 | 60 | 145 | 32 | 117 | 4.55e-33 | 119 |
MS.gene30852.t1 | AT5G11590 | 50.427 | 117 | 54 | 1 | 33 | 145 | 16 | 132 | 1.90e-32 | 118 |
MS.gene30852.t1 | AT2G44940 | 54.286 | 105 | 48 | 0 | 53 | 157 | 89 | 193 | 3.56e-31 | 116 |
MS.gene30852.t1 | AT4G32800 | 50.467 | 107 | 47 | 1 | 51 | 151 | 6 | 112 | 3.63e-31 | 114 |
MS.gene30852.t1 | AT2G35700 | 45.255 | 137 | 71 | 1 | 59 | 195 | 40 | 172 | 2.95e-29 | 108 |
MS.gene30852.t1 | AT3G16280 | 59.494 | 79 | 32 | 0 | 60 | 138 | 57 | 135 | 7.38e-28 | 106 |
MS.gene30852.t1 | AT1G01250 | 60.000 | 80 | 32 | 0 | 59 | 138 | 40 | 119 | 7.48e-28 | 105 |
MS.gene30852.t1 | AT3G16280 | 47.015 | 134 | 66 | 2 | 60 | 191 | 75 | 205 | 1.09e-27 | 106 |
MS.gene30852.t1 | AT4G16750 | 58.750 | 80 | 33 | 0 | 59 | 138 | 35 | 114 | 1.33e-27 | 103 |
MS.gene30852.t1 | AT2G36450 | 41.398 | 186 | 97 | 5 | 52 | 230 | 3 | 183 | 4.07e-27 | 102 |
MS.gene30852.t1 | AT5G52020 | 40.113 | 177 | 94 | 5 | 60 | 230 | 61 | 231 | 6.68e-26 | 101 |
MS.gene30852.t1 | AT2G25820 | 60.526 | 76 | 30 | 0 | 63 | 138 | 25 | 100 | 1.21e-25 | 100 |
MS.gene30852.t1 | AT3G60490 | 60.000 | 75 | 30 | 0 | 64 | 138 | 71 | 145 | 1.68e-25 | 100 |
MS.gene30852.t1 | AT1G71450 | 44.068 | 118 | 57 | 1 | 64 | 172 | 24 | 141 | 2.24e-22 | 90.5 |
MS.gene30852.t1 | AT1G77200 | 46.218 | 119 | 61 | 2 | 20 | 138 | 2 | 117 | 1.60e-20 | 87.0 |
MS.gene30852.t1 | AT2G47520 | 43.299 | 97 | 51 | 1 | 23 | 119 | 13 | 105 | 2.24e-20 | 85.1 |
MS.gene30852.t1 | AT1G21910 | 47.826 | 92 | 41 | 1 | 64 | 148 | 50 | 141 | 3.73e-19 | 83.2 |
MS.gene30852.t1 | AT1G33760 | 50.549 | 91 | 45 | 0 | 64 | 154 | 20 | 110 | 5.77e-19 | 81.6 |
MS.gene30852.t1 | AT1G12630 | 38.743 | 191 | 84 | 6 | 60 | 230 | 15 | 192 | 1.06e-18 | 81.3 |
MS.gene30852.t1 | AT4G13620 | 41.085 | 129 | 60 | 4 | 6 | 121 | 164 | 289 | 1.90e-18 | 83.6 |
MS.gene30852.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 59 | 121 | 27 | 88 | 6.38e-18 | 77.8 |
MS.gene30852.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 59 | 121 | 27 | 88 | 7.57e-18 | 77.8 |
MS.gene30852.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 59 | 121 | 27 | 88 | 7.57e-18 | 77.8 |
MS.gene30852.t1 | AT3G16770 | 52.564 | 78 | 30 | 1 | 44 | 121 | 66 | 136 | 8.19e-18 | 80.1 |
MS.gene30852.t1 | AT5G21960 | 46.429 | 84 | 45 | 0 | 62 | 145 | 5 | 88 | 4.44e-17 | 77.4 |
MS.gene30852.t1 | AT4G39780 | 55.738 | 61 | 27 | 0 | 59 | 119 | 88 | 148 | 6.23e-17 | 77.8 |
MS.gene30852.t1 | AT1G74930 | 43.023 | 86 | 49 | 0 | 64 | 149 | 21 | 106 | 6.31e-17 | 76.3 |
MS.gene30852.t1 | AT3G50260 | 34.959 | 123 | 68 | 3 | 64 | 186 | 21 | 131 | 9.79e-17 | 74.7 |
MS.gene30852.t1 | AT1G22190 | 57.627 | 59 | 25 | 0 | 63 | 121 | 82 | 140 | 1.25e-16 | 77.0 |
MS.gene30852.t1 | AT1G19210 | 32.500 | 160 | 88 | 3 | 64 | 223 | 12 | 151 | 1.50e-16 | 75.1 |
MS.gene30852.t1 | AT4G06746 | 51.613 | 62 | 30 | 0 | 64 | 125 | 36 | 97 | 3.97e-16 | 73.2 |
MS.gene30852.t1 | AT4G36900 | 55.000 | 60 | 27 | 0 | 60 | 119 | 26 | 85 | 8.21e-16 | 73.6 |
MS.gene30852.t1 | AT2G22200 | 55.932 | 59 | 26 | 0 | 63 | 121 | 70 | 128 | 8.32e-16 | 74.7 |
MS.gene30852.t1 | AT1G78080 | 55.932 | 59 | 26 | 0 | 63 | 121 | 151 | 209 | 1.40e-15 | 74.7 |
MS.gene30852.t1 | AT2G23340 | 57.143 | 56 | 24 | 0 | 64 | 119 | 28 | 83 | 1.59e-15 | 72.4 |
MS.gene30852.t1 | AT5G67190 | 55.357 | 56 | 25 | 0 | 64 | 119 | 21 | 76 | 1.87e-15 | 72.4 |
MS.gene30852.t1 | AT3G11020 | 53.030 | 66 | 31 | 0 | 58 | 123 | 72 | 137 | 2.35e-15 | 74.3 |
MS.gene30852.t1 | AT2G20880 | 33.835 | 133 | 81 | 2 | 40 | 172 | 165 | 290 | 2.53e-15 | 74.3 |
MS.gene30852.t1 | AT1G36060 | 57.895 | 57 | 24 | 0 | 63 | 119 | 142 | 198 | 4.31e-15 | 73.2 |
MS.gene30852.t1 | AT2G33710 | 46.250 | 80 | 38 | 1 | 59 | 133 | 65 | 144 | 5.62e-15 | 71.6 |
MS.gene30852.t1 | AT5G65130 | 43.158 | 95 | 42 | 2 | 39 | 121 | 74 | 168 | 5.69e-15 | 72.4 |
MS.gene30852.t1 | AT1G71520 | 33.566 | 143 | 79 | 4 | 58 | 194 | 8 | 140 | 5.85e-15 | 70.1 |
MS.gene30852.t1 | AT5G65130 | 43.158 | 95 | 42 | 2 | 39 | 121 | 76 | 170 | 5.93e-15 | 72.4 |
MS.gene30852.t1 | AT2G33710 | 54.098 | 61 | 28 | 0 | 59 | 119 | 65 | 125 | 6.20e-15 | 71.6 |
MS.gene30852.t1 | AT5G05410 | 55.932 | 59 | 26 | 0 | 64 | 122 | 79 | 137 | 6.26e-15 | 72.8 |
MS.gene30852.t1 | AT4G28140 | 44.444 | 81 | 40 | 1 | 46 | 121 | 120 | 200 | 7.99e-15 | 72.4 |
MS.gene30852.t1 | AT5G05410 | 57.143 | 56 | 24 | 0 | 64 | 119 | 79 | 134 | 8.03e-15 | 72.8 |
MS.gene30852.t1 | AT5G13330 | 49.315 | 73 | 32 | 2 | 60 | 132 | 37 | 104 | 2.21e-14 | 70.1 |
MS.gene30852.t1 | AT5G07580 | 38.583 | 127 | 70 | 4 | 15 | 135 | 58 | 182 | 2.21e-14 | 69.7 |
MS.gene30852.t1 | AT3G15210 | 57.143 | 56 | 24 | 0 | 64 | 119 | 25 | 80 | 3.35e-14 | 69.7 |
MS.gene30852.t1 | AT1G22810 | 39.785 | 93 | 41 | 2 | 64 | 148 | 14 | 99 | 4.19e-14 | 67.8 |
MS.gene30852.t1 | AT3G61630 | 32.192 | 146 | 81 | 4 | 64 | 197 | 105 | 244 | 4.48e-14 | 70.5 |
MS.gene30852.t1 | AT3G57600 | 55.357 | 56 | 25 | 0 | 64 | 119 | 28 | 83 | 5.47e-14 | 69.7 |
MS.gene30852.t1 | AT5G61890 | 53.333 | 60 | 26 | 1 | 60 | 119 | 88 | 145 | 5.56e-14 | 69.3 |
MS.gene30852.t1 | AT5G61600 | 57.377 | 61 | 23 | 2 | 60 | 119 | 86 | 144 | 7.52e-14 | 68.9 |
MS.gene30852.t1 | AT5G44210 | 55.357 | 56 | 25 | 0 | 64 | 119 | 33 | 88 | 8.67e-14 | 68.2 |
MS.gene30852.t1 | AT1G72360 | 48.485 | 66 | 31 | 1 | 54 | 119 | 18 | 80 | 8.71e-14 | 68.2 |
MS.gene30852.t1 | AT1G72360 | 37.647 | 85 | 53 | 0 | 35 | 119 | 45 | 129 | 1.48e-13 | 68.6 |
MS.gene30852.t1 | AT1G15360 | 55.357 | 56 | 25 | 0 | 64 | 119 | 7 | 62 | 1.57e-13 | 67.4 |
MS.gene30852.t1 | AT1G15360 | 55.357 | 56 | 25 | 0 | 64 | 119 | 7 | 62 | 1.57e-13 | 67.4 |
MS.gene30852.t1 | AT1G72360 | 48.529 | 68 | 31 | 2 | 52 | 119 | 68 | 131 | 1.59e-13 | 68.2 |
MS.gene30852.t1 | AT5G64750 | 38.384 | 99 | 55 | 2 | 74 | 172 | 195 | 287 | 1.74e-13 | 69.3 |
MS.gene30852.t1 | AT5G51190 | 52.308 | 65 | 30 | 1 | 56 | 119 | 64 | 128 | 1.95e-13 | 67.4 |
MS.gene30852.t1 | AT4G11140 | 38.710 | 93 | 44 | 2 | 64 | 149 | 87 | 173 | 2.25e-13 | 68.2 |
MS.gene30852.t1 | AT4G27950 | 53.571 | 56 | 26 | 0 | 64 | 119 | 118 | 173 | 2.96e-13 | 68.2 |
MS.gene30852.t1 | AT5G47230 | 53.125 | 64 | 27 | 2 | 57 | 119 | 151 | 212 | 3.87e-13 | 67.8 |
MS.gene30852.t1 | AT1G03800 | 47.059 | 68 | 33 | 1 | 52 | 119 | 44 | 108 | 4.31e-13 | 67.0 |
MS.gene30852.t1 | AT5G43410 | 51.667 | 60 | 28 | 1 | 61 | 119 | 12 | 71 | 4.41e-13 | 64.7 |
MS.gene30852.t1 | AT1G75490 | 45.833 | 72 | 39 | 0 | 63 | 134 | 41 | 112 | 5.90e-13 | 65.9 |
MS.gene30852.t1 | AT4G31060 | 50.000 | 56 | 28 | 0 | 64 | 119 | 27 | 82 | 7.88e-13 | 65.1 |
MS.gene30852.t1 | AT5G19790 | 46.154 | 78 | 38 | 2 | 45 | 121 | 5 | 79 | 1.19e-12 | 65.9 |
MS.gene30852.t1 | AT5G25390 | 51.786 | 56 | 27 | 0 | 64 | 119 | 7 | 62 | 1.31e-12 | 64.7 |
MS.gene30852.t1 | AT3G23230 | 52.632 | 57 | 26 | 1 | 64 | 119 | 20 | 76 | 1.46e-12 | 63.5 |
MS.gene30852.t1 | AT5G25190 | 55.357 | 56 | 25 | 0 | 64 | 119 | 8 | 63 | 2.85e-12 | 63.5 |
MS.gene30852.t1 | AT3G20310 | 50.000 | 62 | 31 | 0 | 58 | 119 | 21 | 82 | 2.95e-12 | 64.7 |
MS.gene30852.t1 | AT5G53290 | 50.877 | 57 | 28 | 0 | 64 | 120 | 125 | 181 | 2.97e-12 | 65.5 |
MS.gene30852.t1 | AT1G28360 | 55.357 | 56 | 25 | 0 | 64 | 119 | 12 | 67 | 3.71e-12 | 63.5 |
MS.gene30852.t1 | AT5G18450 | 51.724 | 58 | 28 | 0 | 63 | 120 | 33 | 90 | 4.33e-12 | 64.7 |
MS.gene30852.t1 | AT1G77640 | 48.889 | 90 | 40 | 2 | 64 | 147 | 43 | 132 | 5.19e-12 | 63.9 |
MS.gene30852.t1 | AT2G46310 | 31.343 | 134 | 83 | 3 | 64 | 194 | 99 | 226 | 5.54e-12 | 64.3 |
MS.gene30852.t1 | AT4G17490 | 51.562 | 64 | 28 | 2 | 57 | 119 | 132 | 193 | 6.67e-12 | 63.9 |
MS.gene30852.t1 | AT1G28370 | 51.786 | 56 | 27 | 0 | 64 | 119 | 20 | 75 | 6.72e-12 | 62.4 |
MS.gene30852.t1 | AT5G61590 | 48.276 | 87 | 42 | 2 | 50 | 135 | 95 | 179 | 7.63e-12 | 62.8 |
MS.gene30852.t1 | AT4G23750 | 49.123 | 57 | 29 | 0 | 64 | 120 | 122 | 178 | 1.03e-11 | 63.9 |
MS.gene30852.t1 | AT4G23750 | 49.123 | 57 | 29 | 0 | 64 | 120 | 122 | 178 | 1.03e-11 | 63.9 |
MS.gene30852.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 64 | 119 | 14 | 69 | 1.24e-11 | 63.2 |
MS.gene30852.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 64 | 119 | 14 | 69 | 1.24e-11 | 63.2 |
MS.gene30852.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 64 | 119 | 14 | 69 | 1.24e-11 | 63.2 |
MS.gene30852.t1 | AT1G28370 | 51.786 | 56 | 27 | 0 | 64 | 119 | 58 | 113 | 1.25e-11 | 62.4 |
MS.gene30852.t1 | AT2G40350 | 45.833 | 72 | 32 | 1 | 64 | 135 | 74 | 138 | 1.30e-11 | 61.2 |
MS.gene30852.t1 | AT1G12890 | 42.308 | 78 | 42 | 1 | 42 | 119 | 2 | 76 | 1.39e-11 | 62.4 |
MS.gene30852.t1 | AT1G50640 | 53.571 | 56 | 26 | 0 | 64 | 119 | 28 | 83 | 1.48e-11 | 62.4 |
MS.gene30852.t1 | AT2G40350 | 45.833 | 72 | 32 | 1 | 64 | 135 | 67 | 131 | 1.52e-11 | 60.8 |
MS.gene30852.t1 | AT5G47220 | 52.632 | 57 | 26 | 1 | 64 | 119 | 117 | 173 | 1.94e-11 | 62.4 |
MS.gene30852.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 64 | 119 | 72 | 127 | 1.96e-11 | 62.8 |
MS.gene30852.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 64 | 119 | 72 | 127 | 2.56e-11 | 62.8 |
MS.gene30852.t1 | AT2G40340 | 50.000 | 56 | 28 | 0 | 64 | 119 | 79 | 134 | 2.75e-11 | 62.8 |
MS.gene30852.t1 | AT5G07310 | 51.562 | 64 | 29 | 1 | 60 | 123 | 90 | 151 | 7.05e-11 | 60.8 |
Find 77 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATGAACTCTCGGTGGAATT+TGG | 0.218037 | 6.2:-58423828 | None:intergenic |
ATGTTGCTTCAATGGCATTA+AGG | 0.227810 | 6.2:+58424090 | MS.gene30852:CDS |
TTCCTCCCAGCACGCTTCTT+TGG | 0.236811 | 6.2:-58423918 | None:intergenic |
GGAAGAGGAACTTAGATAAA+TGG | 0.256718 | 6.2:+58423982 | MS.gene30852:CDS |
CAAATCTTAGTCTTCTTGTT+TGG | 0.292823 | 6.2:-58424023 | None:intergenic |
GCCAGAGTTGTTGAGGAATA+TGG | 0.301561 | 6.2:+58424343 | MS.gene30852:CDS |
ACCTCTTCATCTTGAAAATC+TGG | 0.311282 | 6.2:-58424431 | None:intergenic |
GCCTGAGTGGTGGCAGGTAT+AGG | 0.319307 | 6.2:-58424158 | None:intergenic |
GACTCGCCACCCGGTATATA+GGG | 0.321867 | 6.2:+58423953 | MS.gene30852:CDS |
AGACTCGCCACCCGGTATAT+AGG | 0.350439 | 6.2:+58423952 | MS.gene30852:CDS |
CCTGAGTGGTGGCAGGTATA+GGG | 0.356312 | 6.2:-58424157 | None:intergenic |
CGGTGGAATTTGGAGAAAAC+TGG | 0.366649 | 6.2:-58423818 | None:intergenic |
GACTTGTATGGAAGAGGAAG+AGG | 0.398759 | 6.2:+58424298 | MS.gene30852:CDS |
ATGTGCCCGGGCTGCCATCT+CGG | 0.400727 | 6.2:-58424066 | None:intergenic |
TGTTGCTTCAATGGCATTAA+GGG | 0.407611 | 6.2:+58424091 | MS.gene30852:CDS |
AACTGCCGAGATGGCAGCCC+GGG | 0.407631 | 6.2:+58424061 | MS.gene30852:CDS |
TGCGAATTCAGAGGGCTCTC+AGG | 0.415939 | 6.2:+58423851 | MS.gene30852:CDS |
CAAACAAGAAGACTAAGATT+TGG | 0.423028 | 6.2:+58424024 | MS.gene30852:CDS |
GAAGAGGAAGAGGAAGAAGA+GGG | 0.430166 | 6.2:+58424308 | MS.gene30852:CDS |
GAAGAGGAACTTAGATAAAT+GGG | 0.434368 | 6.2:+58423983 | MS.gene30852:CDS |
TGCTGGGAGGAAGAAGTTCC+AGG | 0.438027 | 6.2:+58423929 | MS.gene30852:CDS |
ATGTCTCCTACACATAGCTT+TGG | 0.439535 | 6.2:+58424371 | MS.gene30852:CDS |
GGCACATGATGTTGCTTCAA+TGG | 0.452514 | 6.2:+58424082 | MS.gene30852:CDS |
TGTCTCCTACACATAGCTTT+GGG | 0.457669 | 6.2:+58424372 | MS.gene30852:CDS |
GCTAACCTCACTTCCTCGTT+GGG | 0.459051 | 6.2:-58423885 | None:intergenic |
ATACCGGGTGGCGAGTCTCC+TGG | 0.468976 | 6.2:-58423947 | None:intergenic |
TTCCTCACACCCCTATATAC+CGG | 0.471420 | 6.2:-58423963 | None:intergenic |
GGAGCAGAGTAGGACTTGTA+TGG | 0.472667 | 6.2:+58424286 | MS.gene30852:CDS |
GGAAGAGGAAGAGGAAGAAG+AGG | 0.473659 | 6.2:+58424307 | MS.gene30852:CDS |
CGGGCTGCCATCTCGGCAGT+TGG | 0.488790 | 6.2:-58424059 | None:intergenic |
TTGAAGCAACATCATGTGCC+CGG | 0.494126 | 6.2:-58424079 | None:intergenic |
ACGACTCCAAAGAAGCGTGC+TGG | 0.499803 | 6.2:+58423912 | MS.gene30852:CDS |
AGCGGCTGCACAGGCCGCAG+AGG | 0.499896 | 6.2:+58424196 | MS.gene30852:CDS |
TATATAGGGGTGTGAGGAAG+AGG | 0.500596 | 6.2:+58423967 | MS.gene30852:CDS |
AGCTAACCTCACTTCCTCGT+TGG | 0.500899 | 6.2:-58423886 | None:intergenic |
CGACTCCAAAGAAGCGTGCT+GGG | 0.504020 | 6.2:+58423913 | MS.gene30852:CDS |
GGCCGCAGAGGCTTTCAGAC+CGG | 0.508268 | 6.2:+58424208 | MS.gene30852:CDS |
AAGATGAAGAGGTATCACTA+TGG | 0.512792 | 6.2:+58424441 | MS.gene30852:CDS |
GAGTAGGACTTGTATGGAAG+AGG | 0.516467 | 6.2:+58424292 | MS.gene30852:CDS |
GCCATATTCCTCAACAACTC+TGG | 0.516505 | 6.2:-58424344 | None:intergenic |
GCGAATTCAGAGGGCTCTCA+GGG | 0.519443 | 6.2:+58423852 | MS.gene30852:CDS |
CAACTGCCGAGATGGCAGCC+CGG | 0.522483 | 6.2:+58424060 | MS.gene30852:CDS |
AAGAGGAAGAGGAAGAAGAG+GGG | 0.525108 | 6.2:+58424309 | MS.gene30852:CDS |
TTAGTCATCGAAGTCTTGTC+CGG | 0.525341 | 6.2:-58424227 | None:intergenic |
TGAATTCGCAAATGAACTCT+CGG | 0.541132 | 6.2:-58423838 | None:intergenic |
TAAATGGGTGTGTGAAATGA+GGG | 0.541686 | 6.2:+58423998 | MS.gene30852:CDS |
GGCTATTGCCACCTCTGCTA+CGG | 0.542428 | 6.2:+58424262 | MS.gene30852:CDS |
GGAGTCTGCAAAGTTGAGAC+AGG | 0.548191 | 6.2:-58424123 | None:intergenic |
AGTTCATTTGCGAATTCAGA+GGG | 0.549616 | 6.2:+58423843 | MS.gene30852:CDS |
AGAGGAAGAGGAAGAAGAGG+GGG | 0.554107 | 6.2:+58424310 | MS.gene30852:CDS |
GTTCCAGGAGACTCGCCACC+CGG | 0.558195 | 6.2:+58423944 | MS.gene30852:CDS |
CCCTATACCTGCCACCACTC+AGG | 0.559517 | 6.2:+58424157 | MS.gene30852:CDS |
CTGCTACGGAGGAGCAGAGT+AGG | 0.566112 | 6.2:+58424276 | MS.gene30852:CDS |
CTGCTCCTCCGTAGCAGAGG+TGG | 0.568749 | 6.2:-58424270 | None:intergenic |
TGAAGCAACATCATGTGCCC+GGG | 0.576327 | 6.2:-58424078 | None:intergenic |
TATTGCCACCTCTGCTACGG+AGG | 0.578389 | 6.2:+58424265 | MS.gene30852:CDS |
AAGAAGACTAAGATTTGGCT+AGG | 0.578791 | 6.2:+58424029 | MS.gene30852:CDS |
TCCTCACACCCCTATATACC+GGG | 0.585609 | 6.2:-58423962 | None:intergenic |
ATAAATGGGTGTGTGAAATG+AGG | 0.586819 | 6.2:+58423997 | MS.gene30852:CDS |
GAGTTCATTTGCGAATTCAG+AGG | 0.592725 | 6.2:+58423842 | MS.gene30852:CDS |
TGAACATGCCAGAGTTGTTG+AGG | 0.595940 | 6.2:+58424336 | MS.gene30852:CDS |
TGATACCCAAAGCTATGTGT+AGG | 0.600852 | 6.2:-58424377 | None:intergenic |
GTTGCTTCAATGGCATTAAG+GGG | 0.609844 | 6.2:+58424092 | MS.gene30852:CDS |
ACTCTGCTCCTCCGTAGCAG+AGG | 0.628165 | 6.2:-58424273 | None:intergenic |
CAATTCCCAACGAGGAAGTG+AGG | 0.632492 | 6.2:+58423880 | MS.gene30852:CDS |
ACTCGCCACCCGGTATATAG+GGG | 0.659441 | 6.2:+58423954 | MS.gene30852:CDS |
ACCCGGTATATAGGGGTGTG+AGG | 0.669533 | 6.2:+58423961 | MS.gene30852:CDS |
TCAACTTTGCAGACTCCGCG+TGG | 0.671197 | 6.2:+58424129 | MS.gene30852:CDS |
GTCCGGTCTGAAAGCCTCTG+CGG | 0.672100 | 6.2:-58424210 | None:intergenic |
CTCCAAAGAAGCGTGCTGGG+AGG | 0.687412 | 6.2:+58423916 | MS.gene30852:CDS |
ATTCGCAAATGAACTCTCGG+TGG | 0.692873 | 6.2:-58423835 | None:intergenic |
GAATTTGGAGAAAACTGGTG+TGG | 0.699539 | 6.2:-58423813 | None:intergenic |
GATGACTAATGACATTGACA+CGG | 0.709180 | 6.2:+58424241 | MS.gene30852:CDS |
CGAATTCAGAGGGCTCTCAG+GGG | 0.717384 | 6.2:+58423853 | MS.gene30852:CDS |
AGGTATAGGGAGTCGCCACG+CGG | 0.731956 | 6.2:-58424144 | None:intergenic |
GGGGATGTCAATTCCCAACG+AGG | 0.739386 | 6.2:+58423872 | MS.gene30852:CDS |
TCACACCCCTATATACCGGG+TGG | 0.772358 | 6.2:-58423959 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
CAAACAAGAAGACTAAGATT+TGG | + | chr6.2:58424024-58424043 | MS.gene30852:CDS | 30.0% | |
GAAGAGGAACTTAGATAAAT+GGG | + | chr6.2:58423983-58424002 | MS.gene30852:CDS | 30.0% | |
GGCAAAAGATATACAAAAAG+CGG | + | chr6.2:58424178-58424197 | MS.gene30852:CDS | 30.0% | |
! | CAAATCTTAGTCTTCTTGTT+TGG | - | chr6.2:58424026-58424045 | None:intergenic | 30.0% |
AAGAAGACTAAGATTTGGCT+AGG | + | chr6.2:58424029-58424048 | MS.gene30852:CDS | 35.0% | |
ACCTCTTCATCTTGAAAATC+TGG | - | chr6.2:58424434-58424453 | None:intergenic | 35.0% | |
AGTTCATTTGCGAATTCAGA+GGG | + | chr6.2:58423843-58423862 | MS.gene30852:CDS | 35.0% | |
ATAAATGGGTGTGTGAAATG+AGG | + | chr6.2:58423997-58424016 | MS.gene30852:CDS | 35.0% | |
GATGACTAATGACATTGACA+CGG | + | chr6.2:58424241-58424260 | MS.gene30852:CDS | 35.0% | |
GGAAGAGGAACTTAGATAAA+TGG | + | chr6.2:58423982-58424001 | MS.gene30852:CDS | 35.0% | |
TAAATGGGTGTGTGAAATGA+GGG | + | chr6.2:58423998-58424017 | MS.gene30852:CDS | 35.0% | |
TGAATTCGCAAATGAACTCT+CGG | - | chr6.2:58423841-58423860 | None:intergenic | 35.0% | |
! | ATGTTGCTTCAATGGCATTA+AGG | + | chr6.2:58424090-58424109 | MS.gene30852:CDS | 35.0% |
! | TGTTGCTTCAATGGCATTAA+GGG | + | chr6.2:58424091-58424110 | MS.gene30852:CDS | 35.0% |
! | TTGTATATCTTTTGCCTGAG+TGG | - | chr6.2:58424174-58424193 | None:intergenic | 35.0% |
!! | AAGATGAAGAGGTATCACTA+TGG | + | chr6.2:58424441-58424460 | MS.gene30852:CDS | 35.0% |
!! | TCCAGATTTTCAAGATGAAG+AGG | + | chr6.2:58424430-58424449 | MS.gene30852:CDS | 35.0% |
AATGAACTCTCGGTGGAATT+TGG | - | chr6.2:58423831-58423850 | None:intergenic | 40.0% | |
ATGTCTCCTACACATAGCTT+TGG | + | chr6.2:58424371-58424390 | MS.gene30852:CDS | 40.0% | |
GAATTTGGAGAAAACTGGTG+TGG | - | chr6.2:58423816-58423835 | None:intergenic | 40.0% | |
GAGTTCATTTGCGAATTCAG+AGG | + | chr6.2:58423842-58423861 | MS.gene30852:CDS | 40.0% | |
GTTGCTTCAATGGCATTAAG+GGG | + | chr6.2:58424092-58424111 | MS.gene30852:CDS | 40.0% | |
TGATACCCAAAGCTATGTGT+AGG | - | chr6.2:58424380-58424399 | None:intergenic | 40.0% | |
TGTCTCCTACACATAGCTTT+GGG | + | chr6.2:58424372-58424391 | MS.gene30852:CDS | 40.0% | |
! | TATATCTTTTGCCTGAGTGG+TGG | - | chr6.2:58424171-58424190 | None:intergenic | 40.0% |
! | TTAGTCATCGAAGTCTTGTC+CGG | - | chr6.2:58424230-58424249 | None:intergenic | 40.0% |
AAGAGGAAGAGGAAGAAGAG+GGG | + | chr6.2:58424309-58424328 | MS.gene30852:CDS | 45.0% | |
ATTCGCAAATGAACTCTCGG+TGG | - | chr6.2:58423838-58423857 | None:intergenic | 45.0% | |
CGGTGGAATTTGGAGAAAAC+TGG | - | chr6.2:58423821-58423840 | None:intergenic | 45.0% | |
GAAGAGGAAGAGGAAGAAGA+GGG | + | chr6.2:58424308-58424327 | MS.gene30852:CDS | 45.0% | |
GACTTGTATGGAAGAGGAAG+AGG | + | chr6.2:58424298-58424317 | MS.gene30852:CDS | 45.0% | |
GAGTAGGACTTGTATGGAAG+AGG | + | chr6.2:58424292-58424311 | MS.gene30852:CDS | 45.0% | |
GCCAGAGTTGTTGAGGAATA+TGG | + | chr6.2:58424343-58424362 | MS.gene30852:CDS | 45.0% | |
GCCATATTCCTCAACAACTC+TGG | - | chr6.2:58424347-58424366 | None:intergenic | 45.0% | |
TATACAAAAAGCGGCTGCAC+AGG | + | chr6.2:58424187-58424206 | MS.gene30852:CDS | 45.0% | |
TGAACATGCCAGAGTTGTTG+AGG | + | chr6.2:58424336-58424355 | MS.gene30852:CDS | 45.0% | |
TTCCTCACACCCCTATATAC+CGG | - | chr6.2:58423966-58423985 | None:intergenic | 45.0% | |
TTGAAGCAACATCATGTGCC+CGG | - | chr6.2:58424082-58424101 | None:intergenic | 45.0% | |
! | GGCACATGATGTTGCTTCAA+TGG | + | chr6.2:58424082-58424101 | MS.gene30852:CDS | 45.0% |
! | TATATAGGGGTGTGAGGAAG+AGG | + | chr6.2:58423967-58423986 | MS.gene30852:CDS | 45.0% |
AGAGGAAGAGGAAGAAGAGG+GGG | + | chr6.2:58424310-58424329 | MS.gene30852:CDS | 50.0% | |
AGCTAACCTCACTTCCTCGT+TGG | - | chr6.2:58423889-58423908 | None:intergenic | 50.0% | |
CAATTCCCAACGAGGAAGTG+AGG | + | chr6.2:58423880-58423899 | MS.gene30852:CDS | 50.0% | |
GCTAACCTCACTTCCTCGTT+GGG | - | chr6.2:58423888-58423907 | None:intergenic | 50.0% | |
GGAAGAGGAAGAGGAAGAAG+AGG | + | chr6.2:58424307-58424326 | MS.gene30852:CDS | 50.0% | |
GGAGCAGAGTAGGACTTGTA+TGG | + | chr6.2:58424286-58424305 | MS.gene30852:CDS | 50.0% | |
GGAGTCTGCAAAGTTGAGAC+AGG | - | chr6.2:58424126-58424145 | None:intergenic | 50.0% | |
TCCTCACACCCCTATATACC+GGG | - | chr6.2:58423965-58423984 | None:intergenic | 50.0% | |
TGAAGCAACATCATGTGCCC+GGG | - | chr6.2:58424081-58424100 | None:intergenic | 50.0% | |
! | CACTTTTCCAACTGCCGAGA+TGG | + | chr6.2:58424052-58424071 | MS.gene30852:CDS | 50.0% |
ACTCGCCACCCGGTATATAG+GGG | + | chr6.2:58423954-58423973 | MS.gene30852:CDS | 55.0% | |
AGACTCGCCACCCGGTATAT+AGG | + | chr6.2:58423952-58423971 | MS.gene30852:CDS | 55.0% | |
CCTGAGTGGTGGCAGGTATA+GGG | - | chr6.2:58424160-58424179 | None:intergenic | 55.0% | |
CGAATTCAGAGGGCTCTCAG+GGG | + | chr6.2:58423853-58423872 | MS.gene30852:CDS | 55.0% | |
GACTCGCCACCCGGTATATA+GGG | + | chr6.2:58423953-58423972 | MS.gene30852:CDS | 55.0% | |
GCGAATTCAGAGGGCTCTCA+GGG | + | chr6.2:58423852-58423871 | MS.gene30852:CDS | 55.0% | |
GGCTATTGCCACCTCTGCTA+CGG | + | chr6.2:58424262-58424281 | MS.gene30852:CDS | 55.0% | |
GGGGATGTCAATTCCCAACG+AGG | + | chr6.2:58423872-58423891 | MS.gene30852:CDS | 55.0% | |
TATTGCCACCTCTGCTACGG+AGG | + | chr6.2:58424265-58424284 | MS.gene30852:CDS | 55.0% | |
TCAACTTTGCAGACTCCGCG+TGG | + | chr6.2:58424129-58424148 | MS.gene30852:CDS | 55.0% | |
TCACACCCCTATATACCGGG+TGG | - | chr6.2:58423962-58423981 | None:intergenic | 55.0% | |
TGCGAATTCAGAGGGCTCTC+AGG | + | chr6.2:58423851-58423870 | MS.gene30852:CDS | 55.0% | |
TGCTGGGAGGAAGAAGTTCC+AGG | + | chr6.2:58423929-58423948 | MS.gene30852:CDS | 55.0% | |
TTCCTCCCAGCACGCTTCTT+TGG | - | chr6.2:58423921-58423940 | None:intergenic | 55.0% | |
! | ACCCGGTATATAGGGGTGTG+AGG | + | chr6.2:58423961-58423980 | MS.gene30852:CDS | 55.0% |
! | ACGACTCCAAAGAAGCGTGC+TGG | + | chr6.2:58423912-58423931 | MS.gene30852:CDS | 55.0% |
! | CGACTCCAAAGAAGCGTGCT+GGG | + | chr6.2:58423913-58423932 | MS.gene30852:CDS | 55.0% |
! | TCTTTTGCCTGAGTGGTGGC+AGG | - | chr6.2:58424167-58424186 | None:intergenic | 55.0% |
ACTCTGCTCCTCCGTAGCAG+AGG | - | chr6.2:58424276-58424295 | None:intergenic | 60.0% | |
AGGTATAGGGAGTCGCCACG+CGG | - | chr6.2:58424147-58424166 | None:intergenic | 60.0% | |
CCCTATACCTGCCACCACTC+AGG | + | chr6.2:58424157-58424176 | MS.gene30852:CDS | 60.0% | |
CTGCTACGGAGGAGCAGAGT+AGG | + | chr6.2:58424276-58424295 | MS.gene30852:CDS | 60.0% | |
GCCTGAGTGGTGGCAGGTAT+AGG | - | chr6.2:58424161-58424180 | None:intergenic | 60.0% | |
GTCCGGTCTGAAAGCCTCTG+CGG | - | chr6.2:58424213-58424232 | None:intergenic | 60.0% | |
! | CTCCAAAGAAGCGTGCTGGG+AGG | + | chr6.2:58423916-58423935 | MS.gene30852:CDS | 60.0% |
AACTGCCGAGATGGCAGCCC+GGG | + | chr6.2:58424061-58424080 | MS.gene30852:CDS | 65.0% | |
ATACCGGGTGGCGAGTCTCC+TGG | - | chr6.2:58423950-58423969 | None:intergenic | 65.0% | |
ATGTGCCCGGGCTGCCATCT+CGG | - | chr6.2:58424069-58424088 | None:intergenic | 65.0% | |
CAACTGCCGAGATGGCAGCC+CGG | + | chr6.2:58424060-58424079 | MS.gene30852:CDS | 65.0% | |
CTGCTCCTCCGTAGCAGAGG+TGG | - | chr6.2:58424273-58424292 | None:intergenic | 65.0% | |
GGCCGCAGAGGCTTTCAGAC+CGG | + | chr6.2:58424208-58424227 | MS.gene30852:CDS | 65.0% | |
GTTCCAGGAGACTCGCCACC+CGG | + | chr6.2:58423944-58423963 | MS.gene30852:CDS | 65.0% | |
CGGGCTGCCATCTCGGCAGT+TGG | - | chr6.2:58424062-58424081 | None:intergenic | 70.0% | |
AGCGGCTGCACAGGCCGCAG+AGG | + | chr6.2:58424196-58424215 | MS.gene30852:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 58423780 | 58424472 | 58423780 | ID=MS.gene30852 |
chr6.2 | mRNA | 58423780 | 58424472 | 58423780 | ID=MS.gene30852.t1;Parent=MS.gene30852 |
chr6.2 | exon | 58423780 | 58424472 | 58423780 | ID=MS.gene30852.t1.exon1;Parent=MS.gene30852.t1 |
chr6.2 | CDS | 58423780 | 58424472 | 58423780 | ID=cds.MS.gene30852.t1;Parent=MS.gene30852.t1 |
Gene Sequence |
Protein sequence |