Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30841.t1 | ABG75914.1 | 90.7 | 215 | 19 | 1 | 1 | 214 | 1 | 215 | 9.90E-103 | 382.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30841.t1 | Q9M0L0 | 53.0 | 217 | 88 | 6 | 7 | 214 | 5 | 216 | 2.5e-46 | 186.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30841.t1 | A8DPG5 | 90.7 | 215 | 19 | 1 | 1 | 214 | 1 | 215 | 7.1e-103 | 382.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene30841.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30841.t1 | MTR_6g465460 | 90.909 | 209 | 18 | 1 | 1 | 208 | 1 | 209 | 5.90e-127 | 359 |
MS.gene30841.t1 | MTR_6g465450 | 83.886 | 211 | 31 | 2 | 1 | 208 | 1 | 211 | 2.50e-124 | 352 |
MS.gene30841.t1 | MTR_6g465420 | 79.524 | 210 | 41 | 1 | 1 | 208 | 1 | 210 | 8.63e-117 | 333 |
MS.gene30841.t1 | MTR_6g465430 | 81.429 | 210 | 37 | 2 | 1 | 208 | 1 | 210 | 8.49e-115 | 327 |
MS.gene30841.t1 | MTR_6g465690 | 68.837 | 215 | 57 | 4 | 1 | 206 | 3 | 216 | 7.06e-96 | 280 |
MS.gene30841.t1 | MTR_6g466000 | 62.273 | 220 | 61 | 4 | 6 | 214 | 19 | 227 | 5.72e-94 | 274 |
MS.gene30841.t1 | MTR_6g465510 | 71.569 | 204 | 41 | 2 | 27 | 214 | 6 | 208 | 2.27e-92 | 269 |
MS.gene30841.t1 | MTR_6g465530 | 70.769 | 195 | 48 | 4 | 27 | 214 | 6 | 198 | 9.72e-92 | 267 |
MS.gene30841.t1 | MTR_6g466130 | 67.539 | 191 | 58 | 2 | 27 | 214 | 39 | 228 | 3.37e-83 | 247 |
MS.gene30841.t1 | MTR_1g101600 | 57.000 | 200 | 79 | 3 | 18 | 214 | 5 | 200 | 4.25e-67 | 205 |
MS.gene30841.t1 | MTR_6g465850 | 48.214 | 280 | 78 | 6 | 1 | 214 | 1 | 279 | 6.01e-66 | 205 |
MS.gene30841.t1 | MTR_6g465990 | 50.909 | 220 | 66 | 5 | 6 | 214 | 5 | 193 | 1.80e-64 | 198 |
MS.gene30841.t1 | MTR_6g466020 | 53.571 | 196 | 63 | 5 | 20 | 211 | 9 | 180 | 1.27e-57 | 180 |
MS.gene30841.t1 | MTR_5g010940 | 43.913 | 230 | 108 | 6 | 1 | 214 | 3 | 227 | 2.44e-53 | 171 |
MS.gene30841.t1 | MTR_5g010930 | 46.829 | 205 | 86 | 7 | 29 | 214 | 24 | 224 | 5.25e-52 | 167 |
MS.gene30841.t1 | MTR_4g102660 | 52.294 | 218 | 84 | 9 | 14 | 214 | 4 | 218 | 4.16e-51 | 165 |
MS.gene30841.t1 | MTR_5g010910 | 43.781 | 201 | 94 | 5 | 30 | 214 | 25 | 222 | 6.81e-48 | 157 |
MS.gene30841.t1 | MTR_8g006410 | 58.242 | 91 | 38 | 0 | 38 | 128 | 36 | 126 | 5.17e-33 | 118 |
MS.gene30841.t1 | MTR_3g110205 | 55.446 | 101 | 45 | 0 | 43 | 143 | 32 | 132 | 8.73e-33 | 117 |
MS.gene30841.t1 | MTR_2g085015 | 42.690 | 171 | 88 | 4 | 6 | 172 | 5 | 169 | 1.04e-31 | 115 |
MS.gene30841.t1 | MTR_7g046260 | 56.383 | 94 | 41 | 0 | 35 | 128 | 42 | 135 | 6.17e-31 | 113 |
MS.gene30841.t1 | MTR_7g117690 | 52.336 | 107 | 44 | 2 | 22 | 128 | 3 | 102 | 6.62e-31 | 112 |
MS.gene30841.t1 | MTR_5g012910 | 62.025 | 79 | 30 | 0 | 50 | 128 | 24 | 102 | 4.82e-30 | 110 |
MS.gene30841.t1 | MTR_8g027465 | 51.402 | 107 | 45 | 3 | 26 | 128 | 13 | 116 | 6.54e-29 | 107 |
MS.gene30841.t1 | MTR_8g013860 | 52.525 | 99 | 46 | 1 | 31 | 128 | 23 | 121 | 3.02e-28 | 105 |
MS.gene30841.t1 | MTR_8g102800 | 50.833 | 120 | 56 | 2 | 24 | 142 | 8 | 125 | 5.87e-28 | 105 |
MS.gene30841.t1 | MTR_2g101340 | 48.361 | 122 | 57 | 1 | 34 | 149 | 15 | 136 | 1.47e-27 | 104 |
MS.gene30841.t1 | MTR_6g088405 | 60.256 | 78 | 31 | 0 | 51 | 128 | 41 | 118 | 3.00e-27 | 103 |
MS.gene30841.t1 | MTR_4g100650 | 61.538 | 78 | 30 | 0 | 51 | 128 | 71 | 148 | 2.49e-26 | 102 |
MS.gene30841.t1 | MTR_4g102670 | 55.696 | 79 | 34 | 1 | 50 | 128 | 11 | 88 | 9.77e-25 | 95.9 |
MS.gene30841.t1 | MTR_4g035430 | 52.577 | 97 | 41 | 1 | 39 | 135 | 22 | 113 | 1.26e-24 | 97.1 |
MS.gene30841.t1 | MTR_6g088425 | 50.000 | 122 | 50 | 2 | 24 | 135 | 10 | 130 | 1.91e-23 | 94.4 |
MS.gene30841.t1 | MTR_1g006660 | 59.494 | 79 | 32 | 0 | 50 | 128 | 43 | 121 | 6.08e-21 | 88.2 |
MS.gene30841.t1 | MTR_5g008590 | 35.593 | 177 | 96 | 3 | 54 | 213 | 11 | 186 | 1.00e-18 | 80.5 |
MS.gene30841.t1 | MTR_1g060910 | 42.623 | 122 | 44 | 3 | 38 | 157 | 3 | 100 | 2.72e-18 | 79.0 |
MS.gene30841.t1 | MTR_5g008550 | 50.000 | 86 | 43 | 0 | 54 | 139 | 21 | 106 | 4.47e-18 | 79.0 |
MS.gene30841.t1 | MTR_2g435590 | 40.000 | 105 | 60 | 1 | 8 | 112 | 53 | 154 | 7.44e-18 | 79.7 |
MS.gene30841.t1 | MTR_1g014780 | 41.053 | 95 | 49 | 1 | 53 | 140 | 37 | 131 | 9.94e-18 | 79.0 |
MS.gene30841.t1 | MTR_5g008470 | 44.048 | 84 | 47 | 0 | 56 | 139 | 77 | 160 | 4.06e-17 | 76.3 |
MS.gene30841.t1 | MTR_1g014820 | 42.391 | 92 | 49 | 1 | 53 | 140 | 26 | 117 | 5.85e-17 | 77.4 |
MS.gene30841.t1 | MTR_3g105510 | 50.000 | 70 | 35 | 0 | 54 | 123 | 37 | 106 | 1.39e-16 | 75.9 |
MS.gene30841.t1 | MTR_5g083340 | 62.069 | 58 | 22 | 0 | 54 | 111 | 85 | 142 | 1.64e-16 | 77.4 |
MS.gene30841.t1 | MTR_3g074130 | 51.351 | 74 | 34 | 1 | 38 | 111 | 136 | 207 | 1.66e-16 | 77.0 |
MS.gene30841.t1 | MTR_1g014860 | 38.384 | 99 | 54 | 1 | 49 | 140 | 17 | 115 | 2.31e-16 | 75.1 |
MS.gene30841.t1 | MTR_3g102100 | 56.897 | 58 | 25 | 0 | 54 | 111 | 45 | 102 | 3.10e-16 | 73.6 |
MS.gene30841.t1 | MTR_1g090170 | 53.968 | 63 | 29 | 0 | 49 | 111 | 147 | 209 | 4.55e-16 | 75.5 |
MS.gene30841.t1 | MTR_7g021010 | 42.697 | 89 | 50 | 1 | 45 | 132 | 2 | 90 | 6.04e-16 | 72.0 |
MS.gene30841.t1 | MTR_2g105380 | 37.383 | 107 | 55 | 2 | 3 | 109 | 78 | 172 | 7.72e-16 | 75.5 |
MS.gene30841.t1 | MTR_1g090170 | 53.968 | 63 | 29 | 0 | 49 | 111 | 234 | 296 | 7.82e-16 | 75.5 |
MS.gene30841.t1 | MTR_2g043050 | 43.529 | 85 | 48 | 0 | 53 | 137 | 18 | 102 | 7.84e-16 | 73.6 |
MS.gene30841.t1 | MTR_5g062700 | 57.627 | 59 | 25 | 0 | 53 | 111 | 172 | 230 | 8.26e-16 | 75.5 |
MS.gene30841.t1 | MTR_7g020980 | 38.532 | 109 | 64 | 3 | 7 | 113 | 3 | 110 | 1.01e-15 | 72.4 |
MS.gene30841.t1 | MTR_8g090350 | 57.895 | 57 | 24 | 0 | 53 | 109 | 112 | 168 | 1.16e-15 | 74.3 |
MS.gene30841.t1 | MTR_2g090235 | 57.627 | 59 | 25 | 0 | 53 | 111 | 217 | 275 | 1.31e-15 | 75.1 |
MS.gene30841.t1 | MTR_1g087920 | 45.122 | 82 | 43 | 1 | 32 | 111 | 53 | 134 | 1.70e-15 | 73.9 |
MS.gene30841.t1 | MTR_1g014800 | 41.111 | 90 | 46 | 1 | 53 | 135 | 30 | 119 | 1.75e-15 | 72.8 |
MS.gene30841.t1 | MTR_1g019110 | 51.613 | 62 | 30 | 0 | 54 | 115 | 44 | 105 | 2.32e-15 | 71.6 |
MS.gene30841.t1 | MTR_7g021010 | 33.858 | 127 | 83 | 1 | 7 | 132 | 3 | 129 | 2.35e-15 | 71.2 |
MS.gene30841.t1 | MTR_1g028560 | 43.902 | 82 | 41 | 1 | 54 | 135 | 115 | 191 | 2.47e-15 | 73.9 |
MS.gene30841.t1 | MTR_3g105480 | 50.000 | 68 | 34 | 0 | 56 | 123 | 33 | 100 | 3.67e-15 | 72.0 |
MS.gene30841.t1 | MTR_2g043030 | 29.747 | 158 | 97 | 3 | 53 | 196 | 18 | 175 | 3.78e-15 | 71.2 |
MS.gene30841.t1 | MTR_8g092460 | 53.333 | 60 | 28 | 0 | 54 | 113 | 145 | 204 | 5.95e-15 | 72.4 |
MS.gene30841.t1 | MTR_5g083330 | 50.685 | 73 | 36 | 0 | 39 | 111 | 20 | 92 | 7.21e-15 | 72.0 |
MS.gene30841.t1 | MTR_2g089170 | 60.714 | 56 | 22 | 0 | 54 | 109 | 65 | 120 | 7.35e-15 | 70.5 |
MS.gene30841.t1 | MTR_1g101550 | 38.418 | 177 | 90 | 7 | 54 | 214 | 57 | 230 | 7.86e-15 | 71.2 |
MS.gene30841.t1 | MTR_4g086220 | 58.929 | 56 | 23 | 0 | 54 | 109 | 96 | 151 | 8.25e-15 | 70.9 |
MS.gene30841.t1 | MTR_3g053690 | 55.385 | 65 | 26 | 1 | 45 | 109 | 21 | 82 | 1.43e-14 | 70.1 |
MS.gene30841.t1 | MTR_7g028925 | 53.333 | 60 | 25 | 1 | 53 | 112 | 28 | 84 | 1.80e-14 | 67.0 |
MS.gene30841.t1 | MTR_5g016750 | 55.357 | 56 | 25 | 0 | 54 | 109 | 25 | 80 | 1.94e-14 | 68.9 |
MS.gene30841.t1 | MTR_4g086160 | 57.143 | 56 | 24 | 0 | 54 | 109 | 96 | 151 | 2.12e-14 | 69.7 |
MS.gene30841.t1 | MTR_2g078680 | 48.684 | 76 | 36 | 1 | 34 | 109 | 14 | 86 | 2.75e-14 | 68.9 |
MS.gene30841.t1 | MTR_4g086190 | 57.143 | 56 | 24 | 0 | 54 | 109 | 96 | 151 | 2.78e-14 | 69.7 |
MS.gene30841.t1 | MTR_0939s0010 | 58.929 | 56 | 23 | 0 | 54 | 109 | 65 | 120 | 2.82e-14 | 68.9 |
MS.gene30841.t1 | MTR_8g022820 | 41.772 | 79 | 43 | 1 | 47 | 125 | 117 | 192 | 3.52e-14 | 70.9 |
MS.gene30841.t1 | MTR_8g022820 | 41.772 | 79 | 43 | 1 | 47 | 125 | 117 | 192 | 3.52e-14 | 70.9 |
MS.gene30841.t1 | MTR_4g086165 | 57.143 | 56 | 24 | 0 | 54 | 109 | 82 | 137 | 3.63e-14 | 68.9 |
MS.gene30841.t1 | MTR_8g022820 | 41.772 | 79 | 43 | 1 | 47 | 125 | 116 | 191 | 3.65e-14 | 70.9 |
MS.gene30841.t1 | MTR_5g082950 | 58.929 | 56 | 23 | 0 | 54 | 109 | 66 | 121 | 4.10e-14 | 70.1 |
MS.gene30841.t1 | MTR_4g114570 | 50.725 | 69 | 27 | 1 | 54 | 122 | 7 | 68 | 4.65e-14 | 68.6 |
MS.gene30841.t1 | MTR_1g048610 | 42.857 | 91 | 49 | 2 | 20 | 109 | 57 | 145 | 7.81e-14 | 68.2 |
MS.gene30841.t1 | MTR_4g010640 | 55.357 | 56 | 25 | 0 | 54 | 109 | 7 | 62 | 8.69e-14 | 67.8 |
MS.gene30841.t1 | MTR_7g092190 | 57.143 | 56 | 24 | 0 | 54 | 109 | 30 | 85 | 9.23e-14 | 68.9 |
MS.gene30841.t1 | MTR_3g106290 | 58.929 | 56 | 23 | 0 | 54 | 109 | 8 | 63 | 1.13e-13 | 67.0 |
MS.gene30841.t1 | MTR_4g078710 | 36.190 | 105 | 57 | 2 | 54 | 156 | 28 | 124 | 1.34e-13 | 67.4 |
MS.gene30841.t1 | MTR_1g074310 | 51.613 | 62 | 29 | 1 | 54 | 114 | 21 | 82 | 1.34e-13 | 65.9 |
MS.gene30841.t1 | MTR_5g009620 | 40.206 | 97 | 52 | 1 | 19 | 109 | 71 | 167 | 1.39e-13 | 68.6 |
MS.gene30841.t1 | MTR_2g103700 | 51.667 | 60 | 29 | 0 | 54 | 113 | 7 | 66 | 1.46e-13 | 66.6 |
MS.gene30841.t1 | MTR_4g008860 | 58.929 | 56 | 23 | 0 | 54 | 109 | 8 | 63 | 1.61e-13 | 67.0 |
MS.gene30841.t1 | MTR_3g090760 | 31.892 | 185 | 106 | 5 | 28 | 207 | 96 | 265 | 1.78e-13 | 68.6 |
MS.gene30841.t1 | MTR_2g438180 | 53.226 | 62 | 28 | 1 | 54 | 114 | 14 | 75 | 2.18e-13 | 65.1 |
MS.gene30841.t1 | MTR_2g015050 | 54.386 | 57 | 25 | 1 | 54 | 109 | 134 | 190 | 4.83e-13 | 66.6 |
MS.gene30841.t1 | MTR_1g070070 | 54.386 | 57 | 25 | 1 | 54 | 109 | 21 | 77 | 5.91e-13 | 64.3 |
MS.gene30841.t1 | MTR_4g100450 | 42.353 | 85 | 48 | 1 | 30 | 113 | 130 | 214 | 5.94e-13 | 66.6 |
MS.gene30841.t1 | MTR_8g099215 | 45.000 | 80 | 38 | 1 | 36 | 109 | 83 | 162 | 6.41e-13 | 66.6 |
MS.gene30841.t1 | MTR_2g043040 | 40.000 | 85 | 51 | 0 | 53 | 137 | 18 | 102 | 7.15e-13 | 65.9 |
MS.gene30841.t1 | MTR_2g014340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 19 | 74 | 7.22e-13 | 65.1 |
MS.gene30841.t1 | MTR_4g100420 | 52.239 | 67 | 29 | 2 | 48 | 113 | 153 | 217 | 1.11e-12 | 65.9 |
MS.gene30841.t1 | MTR_1g074230 | 56.140 | 57 | 24 | 1 | 54 | 109 | 19 | 75 | 1.97e-12 | 62.8 |
MS.gene30841.t1 | MTR_5g085100 | 40.816 | 98 | 47 | 3 | 23 | 119 | 17 | 104 | 2.97e-12 | 64.7 |
MS.gene30841.t1 | MTR_2g014300 | 55.357 | 56 | 25 | 0 | 54 | 109 | 15 | 70 | 3.03e-12 | 62.8 |
MS.gene30841.t1 | MTR_4g054360 | 48.529 | 68 | 34 | 1 | 47 | 113 | 117 | 184 | 3.47e-12 | 64.3 |
MS.gene30841.t1 | MTR_8g069360 | 51.786 | 56 | 27 | 0 | 54 | 109 | 44 | 99 | 4.21e-12 | 64.7 |
MS.gene30841.t1 | MTR_4g054740 | 33.088 | 136 | 65 | 4 | 6 | 140 | 68 | 178 | 5.06e-12 | 63.5 |
MS.gene30841.t1 | MTR_2g019750 | 33.871 | 124 | 73 | 2 | 39 | 162 | 37 | 151 | 6.03e-12 | 63.9 |
MS.gene30841.t1 | MTR_1g090290 | 51.613 | 62 | 27 | 2 | 49 | 109 | 110 | 169 | 6.54e-12 | 62.4 |
MS.gene30841.t1 | MTR_3g072610 | 42.342 | 111 | 53 | 3 | 39 | 138 | 3 | 113 | 7.21e-12 | 62.8 |
MS.gene30841.t1 | MTR_2g043020 | 50.877 | 57 | 28 | 0 | 53 | 109 | 18 | 74 | 8.56e-12 | 62.4 |
MS.gene30841.t1 | MTR_5g008540 | 47.541 | 61 | 32 | 0 | 56 | 116 | 26 | 86 | 1.04e-11 | 59.7 |
MS.gene30841.t1 | MTR_2g016730 | 50.847 | 59 | 29 | 0 | 51 | 109 | 20 | 78 | 1.08e-11 | 63.2 |
MS.gene30841.t1 | MTR_5g032820 | 53.571 | 56 | 26 | 0 | 54 | 109 | 46 | 101 | 1.37e-11 | 63.2 |
MS.gene30841.t1 | MTR_7g085810 | 44.595 | 74 | 40 | 1 | 54 | 127 | 30 | 102 | 1.38e-11 | 62.4 |
MS.gene30841.t1 | MTR_4g088005 | 48.438 | 64 | 32 | 1 | 47 | 109 | 50 | 113 | 1.44e-11 | 60.1 |
MS.gene30841.t1 | MTR_6g041970 | 39.535 | 86 | 39 | 1 | 54 | 139 | 18 | 90 | 1.62e-11 | 59.3 |
MS.gene30841.t1 | MTR_4g111915 | 45.763 | 59 | 32 | 0 | 54 | 112 | 53 | 111 | 2.17e-11 | 59.7 |
MS.gene30841.t1 | MTR_5g008790 | 39.080 | 87 | 48 | 2 | 54 | 135 | 18 | 104 | 2.79e-11 | 60.1 |
MS.gene30841.t1 | MTR_5g085070 | 47.945 | 73 | 28 | 2 | 47 | 119 | 47 | 109 | 3.37e-11 | 61.6 |
MS.gene30841.t1 | MTR_1g074250 | 49.180 | 61 | 29 | 1 | 51 | 109 | 16 | 76 | 4.06e-11 | 58.9 |
MS.gene30841.t1 | MTR_4g112490 | 38.298 | 94 | 55 | 1 | 22 | 112 | 18 | 111 | 4.94e-11 | 60.1 |
MS.gene30841.t1 | MTR_4g054860 | 43.662 | 71 | 39 | 1 | 46 | 115 | 123 | 193 | 5.18e-11 | 60.8 |
MS.gene30841.t1 | MTR_5g075570 | 46.667 | 60 | 32 | 0 | 50 | 109 | 120 | 179 | 5.19e-11 | 61.2 |
MS.gene30841.t1 | MTR_4g119270 | 44.444 | 72 | 37 | 1 | 38 | 109 | 40 | 108 | 6.38e-11 | 61.2 |
MS.gene30841.t1 | MTR_8g032610 | 50.000 | 58 | 29 | 0 | 56 | 113 | 29 | 86 | 7.55e-11 | 60.8 |
MS.gene30841.t1 | MTR_8g006840 | 50.877 | 57 | 27 | 1 | 54 | 109 | 125 | 181 | 7.64e-11 | 59.7 |
MS.gene30841.t1 | MTR_3g095190 | 52.055 | 73 | 34 | 1 | 54 | 125 | 170 | 242 | 9.88e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30841.t1 | AT4G25470 | 52.752 | 218 | 87 | 6 | 7 | 214 | 5 | 216 | 8.43e-65 | 199 |
MS.gene30841.t1 | AT4G25480 | 53.456 | 217 | 87 | 6 | 7 | 214 | 5 | 216 | 7.19e-61 | 189 |
MS.gene30841.t1 | AT5G51990 | 46.522 | 230 | 93 | 6 | 6 | 214 | 2 | 222 | 2.92e-57 | 181 |
MS.gene30841.t1 | AT1G63030 | 47.619 | 189 | 88 | 3 | 27 | 214 | 3 | 181 | 5.10e-56 | 176 |
MS.gene30841.t1 | AT1G63030 | 47.619 | 189 | 88 | 3 | 27 | 214 | 3 | 181 | 5.10e-56 | 176 |
MS.gene30841.t1 | AT4G25490 | 52.511 | 219 | 86 | 7 | 7 | 214 | 2 | 213 | 5.21e-56 | 177 |
MS.gene30841.t1 | AT1G12610 | 58.571 | 140 | 52 | 1 | 27 | 166 | 3 | 136 | 1.05e-55 | 176 |
MS.gene30841.t1 | AT5G25810 | 50.806 | 124 | 54 | 1 | 12 | 135 | 1 | 117 | 6.11e-34 | 121 |
MS.gene30841.t1 | AT5G11590 | 52.174 | 115 | 51 | 1 | 25 | 135 | 18 | 132 | 2.21e-31 | 115 |
MS.gene30841.t1 | AT2G44940 | 60.215 | 93 | 37 | 0 | 43 | 135 | 89 | 181 | 3.15e-31 | 115 |
MS.gene30841.t1 | AT4G32800 | 57.143 | 98 | 36 | 1 | 50 | 141 | 15 | 112 | 4.10e-31 | 114 |
MS.gene30841.t1 | AT3G16280 | 63.291 | 79 | 29 | 0 | 50 | 128 | 57 | 135 | 9.41e-29 | 108 |
MS.gene30841.t1 | AT3G16280 | 63.291 | 79 | 29 | 0 | 50 | 128 | 75 | 153 | 1.30e-28 | 108 |
MS.gene30841.t1 | AT1G01250 | 60.000 | 80 | 32 | 0 | 49 | 128 | 40 | 119 | 1.74e-28 | 106 |
MS.gene30841.t1 | AT2G35700 | 60.000 | 80 | 32 | 0 | 49 | 128 | 40 | 119 | 3.29e-28 | 105 |
MS.gene30841.t1 | AT4G16750 | 56.790 | 81 | 35 | 0 | 49 | 129 | 35 | 115 | 5.55e-27 | 102 |
MS.gene30841.t1 | AT3G60490 | 53.846 | 91 | 41 | 1 | 39 | 128 | 55 | 145 | 6.51e-26 | 101 |
MS.gene30841.t1 | AT2G36450 | 40.113 | 177 | 90 | 6 | 50 | 214 | 11 | 183 | 3.12e-25 | 97.4 |
MS.gene30841.t1 | AT2G25820 | 60.526 | 76 | 30 | 0 | 53 | 128 | 25 | 100 | 7.02e-25 | 97.8 |
MS.gene30841.t1 | AT1G71450 | 57.317 | 82 | 35 | 0 | 53 | 134 | 23 | 104 | 2.97e-23 | 92.4 |
MS.gene30841.t1 | AT5G52020 | 38.506 | 174 | 95 | 4 | 50 | 214 | 61 | 231 | 1.43e-22 | 92.0 |
MS.gene30841.t1 | AT2G47520 | 44.762 | 105 | 52 | 2 | 10 | 112 | 8 | 108 | 1.82e-20 | 84.7 |
MS.gene30841.t1 | AT1G33760 | 55.172 | 87 | 39 | 0 | 54 | 140 | 20 | 106 | 2.32e-19 | 82.4 |
MS.gene30841.t1 | AT4G13620 | 51.282 | 78 | 37 | 1 | 35 | 111 | 212 | 289 | 5.79e-19 | 84.3 |
MS.gene30841.t1 | AT1G77200 | 58.442 | 77 | 32 | 0 | 52 | 128 | 41 | 117 | 1.23e-18 | 81.6 |
MS.gene30841.t1 | AT5G21960 | 38.211 | 123 | 68 | 1 | 52 | 166 | 5 | 127 | 7.93e-18 | 79.0 |
MS.gene30841.t1 | AT1G22190 | 53.425 | 73 | 32 | 1 | 39 | 111 | 70 | 140 | 8.27e-18 | 79.7 |
MS.gene30841.t1 | AT1G19210 | 31.492 | 181 | 97 | 5 | 54 | 214 | 12 | 185 | 9.76e-18 | 77.8 |
MS.gene30841.t1 | AT1G21910 | 46.739 | 92 | 42 | 1 | 54 | 138 | 50 | 141 | 1.23e-17 | 78.6 |
MS.gene30841.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 49 | 111 | 27 | 88 | 1.45e-17 | 76.6 |
MS.gene30841.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 49 | 111 | 27 | 88 | 1.45e-17 | 76.6 |
MS.gene30841.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 49 | 111 | 27 | 88 | 1.50e-17 | 76.3 |
MS.gene30841.t1 | AT4G39780 | 35.246 | 122 | 65 | 3 | 49 | 169 | 88 | 196 | 2.17e-17 | 78.6 |
MS.gene30841.t1 | AT1G12630 | 60.811 | 74 | 28 | 1 | 50 | 123 | 15 | 87 | 4.84e-17 | 76.3 |
MS.gene30841.t1 | AT2G22200 | 47.561 | 82 | 43 | 0 | 53 | 134 | 70 | 151 | 4.93e-17 | 77.8 |
MS.gene30841.t1 | AT3G16770 | 51.282 | 78 | 31 | 1 | 34 | 111 | 66 | 136 | 5.29e-17 | 77.4 |
MS.gene30841.t1 | AT4G06746 | 53.226 | 62 | 29 | 0 | 54 | 115 | 36 | 97 | 8.51e-17 | 74.7 |
MS.gene30841.t1 | AT3G11020 | 58.730 | 63 | 26 | 0 | 51 | 113 | 75 | 137 | 9.23e-17 | 77.8 |
MS.gene30841.t1 | AT1G74930 | 41.860 | 86 | 50 | 0 | 54 | 139 | 21 | 106 | 1.13e-16 | 75.5 |
MS.gene30841.t1 | AT4G28140 | 33.553 | 152 | 76 | 5 | 36 | 181 | 120 | 252 | 3.69e-16 | 75.5 |
MS.gene30841.t1 | AT1G78080 | 57.627 | 59 | 25 | 0 | 53 | 111 | 151 | 209 | 5.28e-16 | 75.5 |
MS.gene30841.t1 | AT5G65130 | 45.455 | 99 | 40 | 3 | 28 | 113 | 73 | 170 | 6.65e-16 | 74.7 |
MS.gene30841.t1 | AT5G65130 | 45.455 | 99 | 40 | 3 | 28 | 113 | 75 | 172 | 6.66e-16 | 74.7 |
MS.gene30841.t1 | AT2G33710 | 48.101 | 79 | 36 | 1 | 49 | 122 | 65 | 143 | 9.43e-16 | 73.6 |
MS.gene30841.t1 | AT2G20880 | 46.341 | 82 | 42 | 1 | 30 | 111 | 165 | 244 | 9.86e-16 | 75.1 |
MS.gene30841.t1 | AT2G33710 | 48.101 | 79 | 36 | 1 | 49 | 122 | 65 | 143 | 1.51e-15 | 73.2 |
MS.gene30841.t1 | AT3G50260 | 41.935 | 93 | 45 | 2 | 47 | 135 | 14 | 101 | 1.52e-15 | 71.2 |
MS.gene30841.t1 | AT5G05410 | 59.322 | 59 | 24 | 0 | 54 | 112 | 79 | 137 | 2.43e-15 | 73.6 |
MS.gene30841.t1 | AT1G22810 | 34.426 | 122 | 52 | 3 | 54 | 167 | 14 | 115 | 2.48e-15 | 70.5 |
MS.gene30841.t1 | AT1G36060 | 59.649 | 57 | 23 | 0 | 53 | 109 | 142 | 198 | 2.69e-15 | 73.6 |
MS.gene30841.t1 | AT1G71520 | 43.750 | 96 | 45 | 3 | 48 | 137 | 8 | 100 | 2.86e-15 | 70.5 |
MS.gene30841.t1 | AT5G05410 | 59.322 | 59 | 24 | 0 | 54 | 112 | 79 | 137 | 3.48e-15 | 73.6 |
MS.gene30841.t1 | AT4G36900 | 53.333 | 60 | 28 | 0 | 50 | 109 | 26 | 85 | 3.49e-15 | 71.2 |
MS.gene30841.t1 | AT5G67190 | 51.724 | 58 | 28 | 0 | 54 | 111 | 21 | 78 | 7.60e-15 | 70.1 |
MS.gene30841.t1 | AT2G23340 | 49.231 | 65 | 33 | 0 | 54 | 118 | 28 | 92 | 7.69e-15 | 70.1 |
MS.gene30841.t1 | AT4G31060 | 36.508 | 126 | 74 | 4 | 54 | 174 | 27 | 151 | 9.20e-15 | 70.1 |
MS.gene30841.t1 | AT5G47230 | 47.059 | 85 | 43 | 2 | 30 | 113 | 133 | 216 | 9.95e-15 | 71.6 |
MS.gene30841.t1 | AT5G13330 | 51.562 | 64 | 29 | 1 | 50 | 113 | 37 | 98 | 1.81e-14 | 69.7 |
MS.gene30841.t1 | AT5G07580 | 49.367 | 79 | 37 | 2 | 48 | 125 | 106 | 182 | 2.44e-14 | 69.3 |
MS.gene30841.t1 | AT5G61890 | 51.562 | 64 | 29 | 1 | 50 | 113 | 88 | 149 | 2.64e-14 | 70.1 |
MS.gene30841.t1 | AT1G15360 | 57.143 | 56 | 24 | 0 | 54 | 109 | 7 | 62 | 3.24e-14 | 68.9 |
MS.gene30841.t1 | AT1G15360 | 57.143 | 56 | 24 | 0 | 54 | 109 | 7 | 62 | 3.24e-14 | 68.9 |
MS.gene30841.t1 | AT5G44210 | 48.571 | 70 | 29 | 1 | 54 | 123 | 33 | 95 | 3.73e-14 | 68.6 |
MS.gene30841.t1 | AT3G15210 | 55.556 | 63 | 25 | 1 | 47 | 109 | 21 | 80 | 4.81e-14 | 68.9 |
MS.gene30841.t1 | AT1G75490 | 50.000 | 70 | 35 | 0 | 53 | 122 | 41 | 110 | 5.26e-14 | 68.6 |
MS.gene30841.t1 | AT5G61600 | 59.016 | 61 | 22 | 2 | 50 | 109 | 86 | 144 | 5.75e-14 | 68.9 |
MS.gene30841.t1 | AT4G17490 | 47.126 | 87 | 41 | 3 | 30 | 113 | 113 | 197 | 7.75e-14 | 68.9 |
MS.gene30841.t1 | AT3G57600 | 55.357 | 56 | 25 | 0 | 54 | 109 | 28 | 83 | 8.93e-14 | 68.9 |
MS.gene30841.t1 | AT4G11140 | 45.205 | 73 | 34 | 1 | 54 | 126 | 87 | 153 | 9.58e-14 | 68.9 |
MS.gene30841.t1 | AT4G27950 | 54.386 | 57 | 26 | 0 | 54 | 110 | 118 | 174 | 1.27e-13 | 68.9 |
MS.gene30841.t1 | AT1G72360 | 38.542 | 96 | 48 | 2 | 47 | 142 | 18 | 102 | 1.50e-13 | 67.4 |
MS.gene30841.t1 | AT3G61630 | 44.872 | 78 | 37 | 1 | 54 | 131 | 105 | 176 | 1.50e-13 | 68.6 |
MS.gene30841.t1 | AT5G51190 | 55.556 | 63 | 25 | 2 | 48 | 109 | 68 | 128 | 1.82e-13 | 67.4 |
MS.gene30841.t1 | AT5G25390 | 53.571 | 56 | 26 | 0 | 54 | 109 | 7 | 62 | 2.25e-13 | 66.2 |
MS.gene30841.t1 | AT5G43410 | 47.887 | 71 | 34 | 2 | 40 | 109 | 3 | 71 | 2.98e-13 | 64.7 |
MS.gene30841.t1 | AT1G72360 | 35.000 | 120 | 67 | 2 | 23 | 142 | 43 | 151 | 3.93e-13 | 67.0 |
MS.gene30841.t1 | AT1G72360 | 38.542 | 96 | 48 | 2 | 47 | 142 | 69 | 153 | 4.13e-13 | 67.0 |
MS.gene30841.t1 | AT5G53290 | 43.836 | 73 | 41 | 0 | 38 | 110 | 109 | 181 | 6.42e-13 | 67.0 |
MS.gene30841.t1 | AT5G25190 | 57.143 | 56 | 24 | 0 | 54 | 109 | 8 | 63 | 6.90e-13 | 64.7 |
MS.gene30841.t1 | AT3G23230 | 50.000 | 62 | 30 | 1 | 54 | 114 | 20 | 81 | 9.23e-13 | 63.5 |
MS.gene30841.t1 | AT1G12890 | 44.872 | 78 | 40 | 1 | 32 | 109 | 2 | 76 | 1.02e-12 | 65.1 |
MS.gene30841.t1 | AT5G18450 | 56.140 | 57 | 25 | 0 | 53 | 109 | 33 | 89 | 1.32e-12 | 65.9 |
MS.gene30841.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 14 | 69 | 2.21e-12 | 65.1 |
MS.gene30841.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 14 | 69 | 2.21e-12 | 65.1 |
MS.gene30841.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 14 | 69 | 2.21e-12 | 65.1 |
MS.gene30841.t1 | AT3G20310 | 52.459 | 61 | 29 | 0 | 49 | 109 | 22 | 82 | 2.38e-12 | 64.3 |
MS.gene30841.t1 | AT1G03800 | 47.059 | 68 | 33 | 1 | 42 | 109 | 44 | 108 | 2.38e-12 | 64.3 |
MS.gene30841.t1 | AT2G40340 | 51.724 | 58 | 28 | 0 | 54 | 111 | 72 | 129 | 3.93e-12 | 64.3 |
MS.gene30841.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 72 | 127 | 4.56e-12 | 64.7 |
MS.gene30841.t1 | AT2G40340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 79 | 134 | 5.00e-12 | 64.3 |
MS.gene30841.t1 | AT1G28360 | 51.667 | 60 | 29 | 0 | 54 | 113 | 12 | 71 | 6.30e-12 | 62.4 |
MS.gene30841.t1 | AT1G28370 | 51.786 | 56 | 27 | 0 | 54 | 109 | 20 | 75 | 7.01e-12 | 62.0 |
MS.gene30841.t1 | AT2G46310 | 50.000 | 56 | 28 | 0 | 54 | 109 | 99 | 154 | 7.80e-12 | 63.5 |
MS.gene30841.t1 | AT1G28370 | 51.786 | 56 | 27 | 0 | 54 | 109 | 58 | 113 | 9.66e-12 | 62.0 |
MS.gene30841.t1 | AT5G19790 | 51.724 | 58 | 28 | 0 | 54 | 111 | 22 | 79 | 9.76e-12 | 62.8 |
MS.gene30841.t1 | AT5G47220 | 52.632 | 57 | 26 | 1 | 54 | 109 | 117 | 173 | 1.88e-11 | 62.0 |
MS.gene30841.t1 | AT4G23750 | 49.123 | 57 | 29 | 0 | 54 | 110 | 122 | 178 | 2.01e-11 | 62.8 |
MS.gene30841.t1 | AT4G23750 | 49.123 | 57 | 29 | 0 | 54 | 110 | 122 | 178 | 2.01e-11 | 62.8 |
MS.gene30841.t1 | AT1G24590 | 47.143 | 70 | 32 | 1 | 54 | 123 | 58 | 122 | 2.48e-11 | 62.4 |
MS.gene30841.t1 | AT5G64750 | 42.857 | 70 | 39 | 1 | 64 | 133 | 195 | 263 | 2.66e-11 | 62.4 |
MS.gene30841.t1 | AT1G77640 | 45.556 | 90 | 43 | 1 | 54 | 137 | 43 | 132 | 2.87e-11 | 61.6 |
MS.gene30841.t1 | AT1G50640 | 52.381 | 63 | 27 | 1 | 47 | 109 | 24 | 83 | 3.06e-11 | 61.2 |
MS.gene30841.t1 | AT1G12980 | 53.571 | 56 | 26 | 0 | 54 | 109 | 57 | 112 | 3.48e-11 | 62.0 |
MS.gene30841.t1 | AT5G13910 | 44.595 | 74 | 37 | 1 | 54 | 127 | 20 | 89 | 3.61e-11 | 60.8 |
MS.gene30841.t1 | AT5G18560 | 45.070 | 71 | 38 | 1 | 39 | 109 | 41 | 110 | 5.09e-11 | 61.6 |
Find 62 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCTCCCTGCTCTCTTCTT+TGG | 0.152294 | 6.4:-37735482 | None:intergenic |
TCCTCCCTGCTCTCTTCTTT+GGG | 0.261143 | 6.4:-37735481 | None:intergenic |
ATGGGCTCGGGCTGCCATAT+CGG | 0.344047 | 6.4:-37735630 | None:intergenic |
TTCCTACAATAACTCATTGC+CGG | 0.345900 | 6.4:+37735430 | MS.gene30841:CDS |
CAATAACTCATTGCCGGATT+CGG | 0.382010 | 6.4:+37735436 | MS.gene30841:CDS |
GTCTGAGTTATGGAGGAATA+TGG | 0.388348 | 6.4:+37735898 | MS.gene30841:CDS |
AAAGATATTCAGCTCCTTTG+TGG | 0.404977 | 6.4:-37735843 | None:intergenic |
CAAATCCTAGTCTTTGTGTT+GGG | 0.412460 | 6.4:-37735587 | None:intergenic |
ATCGAGGAAGTTGCTGGAAT+AGG | 0.421748 | 6.4:-37735722 | None:intergenic |
GGAAGAGGAACTTAGACAAA+TGG | 0.425545 | 6.4:+37735546 | MS.gene30841:CDS |
TATCGGTAATCATTATAGTA+TGG | 0.428882 | 6.4:-37735796 | None:intergenic |
TCGCAGCAACATCATGGGCT+CGG | 0.436627 | 6.4:-37735643 | None:intergenic |
TGAGGAAATGAAGTGTGAAT+AGG | 0.445511 | 6.4:-37735396 | None:intergenic |
CCAACACAAAGACTAGGATT+TGG | 0.458340 | 6.4:+37735588 | MS.gene30841:CDS |
CGCAGCAACATCATGGGCTC+GGG | 0.465778 | 6.4:-37735642 | None:intergenic |
CGGGCTGCCATATCGGCTGT+TGG | 0.466848 | 6.4:-37735623 | None:intergenic |
TGTTAGATATGTCTGAGTTA+TGG | 0.479559 | 6.4:+37735888 | MS.gene30841:CDS |
AGCTACAACAGTCTCAATAT+CGG | 0.484335 | 6.4:-37735813 | None:intergenic |
ACTCGCCACCCGGTGTATAG+AGG | 0.498536 | 6.4:+37735518 | MS.gene30841:CDS |
ATGCCATCGCAGCAACATCA+TGG | 0.500564 | 6.4:-37735649 | None:intergenic |
TGTTGCTGCGATGGCATTGA+GGG | 0.505227 | 6.4:+37735655 | MS.gene30841:CDS |
AGTAACCCAAAGAAGAGAGC+AGG | 0.505388 | 6.4:+37735476 | MS.gene30841:CDS |
ATGGTCTGGTCTAAAAGCTT+CGG | 0.507769 | 6.4:-37735777 | None:intergenic |
CTCGATAAAAGATATTCAAA+AGG | 0.509288 | 6.4:+37735739 | MS.gene30841:CDS |
AAGATGATGAGGTATCACTA+TGG | 0.509514 | 6.4:+37735987 | MS.gene30841:CDS |
GTAATCATTATAGTATGGTC+TGG | 0.512732 | 6.4:-37735791 | None:intergenic |
GCTAATCGTATCTCCGAATC+CGG | 0.516421 | 6.4:-37735449 | None:intergenic |
CTGTCTCAATTTCGCAGACT+CGG | 0.516981 | 6.4:+37735688 | MS.gene30841:CDS |
AGCCCATGATGTTGCTGCGA+TGG | 0.523213 | 6.4:+37735646 | MS.gene30841:CDS |
GAAGAGGAACTTAGACAAAT+GGG | 0.523345 | 6.4:+37735547 | MS.gene30841:CDS |
CCAAATCCTAGTCTTTGTGT+TGG | 0.525041 | 6.4:-37735588 | None:intergenic |
AGCTATGCGTAGGGGACATG+AGG | 0.541907 | 6.4:-37735922 | None:intergenic |
TGTATAGAGGTGTTAGGAAG+AGG | 0.541975 | 6.4:+37735531 | MS.gene30841:CDS |
ACCCGGTGTATAGAGGTGTT+AGG | 0.542359 | 6.4:+37735525 | MS.gene30841:CDS |
ATCCGGCAATGAGTTATTGT+AGG | 0.542682 | 6.4:-37735432 | None:intergenic |
GTCTGGTCTAAAAGCTTCGG+CGG | 0.563548 | 6.4:-37735774 | None:intergenic |
CATTTGAAAAGCTATGCGTA+GGG | 0.563774 | 6.4:-37735931 | None:intergenic |
TGCCATCGCAGCAACATCAT+GGG | 0.566903 | 6.4:-37735648 | None:intergenic |
ATGTTGCTGCGATGGCATTG+AGG | 0.567345 | 6.4:+37735654 | MS.gene30841:CDS |
CGAAATTGAGACAGGCGTAT+CGG | 0.569677 | 6.4:-37735679 | None:intergenic |
AGCAGGGAGGAAGATATTCA+AGG | 0.572499 | 6.4:+37735493 | MS.gene30841:CDS |
CAAATGGGTGTGTGAAATGA+GGG | 0.573881 | 6.4:+37735562 | MS.gene30841:CDS |
TCATTTGAAAAGCTATGCGT+AGG | 0.578972 | 6.4:-37735932 | None:intergenic |
CGAGTCTGCGAAATTGAGAC+AGG | 0.581266 | 6.4:-37735687 | None:intergenic |
ACAAATGGGTGTGTGAAATG+AGG | 0.584388 | 6.4:+37735561 | MS.gene30841:CDS |
TCCTAACACCTCTATACACC+GGG | 0.586398 | 6.4:-37735526 | None:intergenic |
TAGATATGTCTGAGTTATGG+AGG | 0.591363 | 6.4:+37735891 | MS.gene30841:CDS |
GTAGGAAGAAGATGCTTCTG+AGG | 0.593468 | 6.4:-37735414 | None:intergenic |
TTCCTAACACCTCTATACAC+CGG | 0.602821 | 6.4:-37735527 | None:intergenic |
ACAAAGACTAGGATTTGGCT+AGG | 0.603777 | 6.4:+37735593 | MS.gene30841:CDS |
ATTCAAGGAAACTCGCCACC+CGG | 0.604485 | 6.4:+37735508 | MS.gene30841:CDS |
GTAACCCAAAGAAGAGAGCA+GGG | 0.609180 | 6.4:+37735477 | MS.gene30841:CDS |
AGGAAGTTGCTGGAATAGGA+AGG | 0.611487 | 6.4:-37735718 | None:intergenic |
GGGAGCCCAACACAAAGACT+AGG | 0.634407 | 6.4:+37735582 | MS.gene30841:CDS |
GCTATGCGTAGGGGACATGA+GGG | 0.637803 | 6.4:-37735921 | None:intergenic |
TCAATTTCGCAGACTCGGTG+TGG | 0.646164 | 6.4:+37735693 | MS.gene30841:CDS |
GTTGCTGCGATGGCATTGAG+GGG | 0.653514 | 6.4:+37735656 | MS.gene30841:CDS |
TGTAGCTGTCGTCGCCACAA+AGG | 0.664697 | 6.4:+37735829 | MS.gene30841:CDS |
ATTTGAAAAGCTATGCGTAG+GGG | 0.700287 | 6.4:-37735930 | None:intergenic |
GGATTCGGAGATACGATTAG+CGG | 0.702620 | 6.4:+37735451 | MS.gene30841:CDS |
ACCCAAAGAAGAGAGCAGGG+AGG | 0.745159 | 6.4:+37735480 | MS.gene30841:CDS |
TAACACCTCTATACACCGGG+TGG | 0.755465 | 6.4:-37735523 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | CTCGATAAAAGATATTCAAA+AGG | + | chr6.4:37735739-37735758 | MS.gene30841:CDS | 25.0% |
! | TATCGGTAATCATTATAGTA+TGG | - | chr6.4:37735799-37735818 | None:intergenic | 25.0% |
!! | CTTTTGAATATCTTTTATCG+AGG | - | chr6.4:37735741-37735760 | None:intergenic | 25.0% |
GTAATCATTATAGTATGGTC+TGG | - | chr6.4:37735794-37735813 | None:intergenic | 30.0% | |
TGTTAGATATGTCTGAGTTA+TGG | + | chr6.4:37735888-37735907 | MS.gene30841:CDS | 30.0% | |
!! | ACAAGATTTTCAAGATGATG+AGG | + | chr6.4:37735976-37735995 | MS.gene30841:CDS | 30.0% |
AAAGATATTCAGCTCCTTTG+TGG | - | chr6.4:37735846-37735865 | None:intergenic | 35.0% | |
AGCTACAACAGTCTCAATAT+CGG | - | chr6.4:37735816-37735835 | None:intergenic | 35.0% | |
ATTTGAAAAGCTATGCGTAG+GGG | - | chr6.4:37735933-37735952 | None:intergenic | 35.0% | |
CATTTGAAAAGCTATGCGTA+GGG | - | chr6.4:37735934-37735953 | None:intergenic | 35.0% | |
GAAGAGGAACTTAGACAAAT+GGG | + | chr6.4:37735547-37735566 | MS.gene30841:CDS | 35.0% | |
TAGATATGTCTGAGTTATGG+AGG | + | chr6.4:37735891-37735910 | MS.gene30841:CDS | 35.0% | |
TCATTTGAAAAGCTATGCGT+AGG | - | chr6.4:37735935-37735954 | None:intergenic | 35.0% | |
TGAGGAAATGAAGTGTGAAT+AGG | - | chr6.4:37735399-37735418 | None:intergenic | 35.0% | |
TTCCTACAATAACTCATTGC+CGG | + | chr6.4:37735430-37735449 | MS.gene30841:CDS | 35.0% | |
! | AAGATGATGAGGTATCACTA+TGG | + | chr6.4:37735987-37736006 | MS.gene30841:CDS | 35.0% |
! | AAGGAGCTGAATATCTTTTG+TGG | + | chr6.4:37735848-37735867 | MS.gene30841:CDS | 35.0% |
! | AGGAGCTGAATATCTTTTGT+GGG | + | chr6.4:37735849-37735868 | MS.gene30841:CDS | 35.0% |
! | CAAATCCTAGTCTTTGTGTT+GGG | - | chr6.4:37735590-37735609 | None:intergenic | 35.0% |
ACAAAGACTAGGATTTGGCT+AGG | + | chr6.4:37735593-37735612 | MS.gene30841:CDS | 40.0% | |
ACAAATGGGTGTGTGAAATG+AGG | + | chr6.4:37735561-37735580 | MS.gene30841:CDS | 40.0% | |
ATCCGGCAATGAGTTATTGT+AGG | - | chr6.4:37735435-37735454 | None:intergenic | 40.0% | |
ATGGTCTGGTCTAAAAGCTT+CGG | - | chr6.4:37735780-37735799 | None:intergenic | 40.0% | |
CAAATGGGTGTGTGAAATGA+GGG | + | chr6.4:37735562-37735581 | MS.gene30841:CDS | 40.0% | |
CAATAACTCATTGCCGGATT+CGG | + | chr6.4:37735436-37735455 | MS.gene30841:CDS | 40.0% | |
CCAACACAAAGACTAGGATT+TGG | + | chr6.4:37735588-37735607 | MS.gene30841:CDS | 40.0% | |
GGAAGAGGAACTTAGACAAA+TGG | + | chr6.4:37735546-37735565 | MS.gene30841:CDS | 40.0% | |
GTCTGAGTTATGGAGGAATA+TGG | + | chr6.4:37735898-37735917 | MS.gene30841:CDS | 40.0% | |
TTCCTAACACCTCTATACAC+CGG | - | chr6.4:37735530-37735549 | None:intergenic | 40.0% | |
! | AACTTTTCCAACAGCCGATA+TGG | + | chr6.4:37735616-37735635 | MS.gene30841:CDS | 40.0% |
! | CCAAATCCTAGTCTTTGTGT+TGG | - | chr6.4:37735591-37735610 | None:intergenic | 40.0% |
! | GGAGCTGAATATCTTTTGTG+GGG | + | chr6.4:37735850-37735869 | MS.gene30841:CDS | 40.0% |
! | TCTTTTATCGAGGAAGTTGC+TGG | - | chr6.4:37735731-37735750 | None:intergenic | 40.0% |
!! | TGTATAGAGGTGTTAGGAAG+AGG | + | chr6.4:37735531-37735550 | MS.gene30841:CDS | 40.0% |
AGCAGGGAGGAAGATATTCA+AGG | + | chr6.4:37735493-37735512 | MS.gene30841:CDS | 45.0% | |
AGGAAGTTGCTGGAATAGGA+AGG | - | chr6.4:37735721-37735740 | None:intergenic | 45.0% | |
AGTAACCCAAAGAAGAGAGC+AGG | + | chr6.4:37735476-37735495 | MS.gene30841:CDS | 45.0% | |
ATCGAGGAAGTTGCTGGAAT+AGG | - | chr6.4:37735725-37735744 | None:intergenic | 45.0% | |
CGAAATTGAGACAGGCGTAT+CGG | - | chr6.4:37735682-37735701 | None:intergenic | 45.0% | |
CTGTCTCAATTTCGCAGACT+CGG | + | chr6.4:37735688-37735707 | MS.gene30841:CDS | 45.0% | |
GCTAATCGTATCTCCGAATC+CGG | - | chr6.4:37735452-37735471 | None:intergenic | 45.0% | |
GGATTCGGAGATACGATTAG+CGG | + | chr6.4:37735451-37735470 | MS.gene30841:CDS | 45.0% | |
GTAACCCAAAGAAGAGAGCA+GGG | + | chr6.4:37735477-37735496 | MS.gene30841:CDS | 45.0% | |
GTAGGAAGAAGATGCTTCTG+AGG | - | chr6.4:37735417-37735436 | None:intergenic | 45.0% | |
TCCTAACACCTCTATACACC+GGG | - | chr6.4:37735529-37735548 | None:intergenic | 45.0% | |
ATGCCATCGCAGCAACATCA+TGG | - | chr6.4:37735652-37735671 | None:intergenic | 50.0% | |
ATGTTGCTGCGATGGCATTG+AGG | + | chr6.4:37735654-37735673 | MS.gene30841:CDS | 50.0% | |
ATTCAAGGAAACTCGCCACC+CGG | + | chr6.4:37735508-37735527 | MS.gene30841:CDS | 50.0% | |
CGAGTCTGCGAAATTGAGAC+AGG | - | chr6.4:37735690-37735709 | None:intergenic | 50.0% | |
GTCTGGTCTAAAAGCTTCGG+CGG | - | chr6.4:37735777-37735796 | None:intergenic | 50.0% | |
TAACACCTCTATACACCGGG+TGG | - | chr6.4:37735526-37735545 | None:intergenic | 50.0% | |
TCCTCCCTGCTCTCTTCTTT+GGG | - | chr6.4:37735484-37735503 | None:intergenic | 50.0% | |
TGCCATCGCAGCAACATCAT+GGG | - | chr6.4:37735651-37735670 | None:intergenic | 50.0% | |
TTCCTCCCTGCTCTCTTCTT+TGG | - | chr6.4:37735485-37735504 | None:intergenic | 50.0% | |
! | TGTTGCTGCGATGGCATTGA+GGG | + | chr6.4:37735655-37735674 | MS.gene30841:CDS | 50.0% |
!! | ACCCGGTGTATAGAGGTGTT+AGG | + | chr6.4:37735525-37735544 | MS.gene30841:CDS | 50.0% |
!! | TCAATTTCGCAGACTCGGTG+TGG | + | chr6.4:37735693-37735712 | MS.gene30841:CDS | 50.0% |
ACCCAAAGAAGAGAGCAGGG+AGG | + | chr6.4:37735480-37735499 | MS.gene30841:CDS | 55.0% | |
AGCCCATGATGTTGCTGCGA+TGG | + | chr6.4:37735646-37735665 | MS.gene30841:CDS | 55.0% | |
AGCTATGCGTAGGGGACATG+AGG | - | chr6.4:37735925-37735944 | None:intergenic | 55.0% | |
GCTATGCGTAGGGGACATGA+GGG | - | chr6.4:37735924-37735943 | None:intergenic | 55.0% | |
GGGAGCCCAACACAAAGACT+AGG | + | chr6.4:37735582-37735601 | MS.gene30841:CDS | 55.0% | |
TCGCAGCAACATCATGGGCT+CGG | - | chr6.4:37735646-37735665 | None:intergenic | 55.0% | |
TGTAGCTGTCGTCGCCACAA+AGG | + | chr6.4:37735829-37735848 | MS.gene30841:CDS | 55.0% | |
! | GTTGCTGCGATGGCATTGAG+GGG | + | chr6.4:37735656-37735675 | MS.gene30841:CDS | 55.0% |
ACTCGCCACCCGGTGTATAG+AGG | + | chr6.4:37735518-37735537 | MS.gene30841:CDS | 60.0% | |
ATGGGCTCGGGCTGCCATAT+CGG | - | chr6.4:37735633-37735652 | None:intergenic | 60.0% | |
CGCAGCAACATCATGGGCTC+GGG | - | chr6.4:37735645-37735664 | None:intergenic | 60.0% | |
! | CGGGCTGCCATATCGGCTGT+TGG | - | chr6.4:37735626-37735645 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 37735374 | 37736018 | 37735374 | ID=MS.gene30841 |
chr6.4 | mRNA | 37735374 | 37736018 | 37735374 | ID=MS.gene30841.t1;Parent=MS.gene30841 |
chr6.4 | exon | 37735374 | 37736018 | 37735374 | ID=MS.gene30841.t1.exon1;Parent=MS.gene30841.t1 |
chr6.4 | CDS | 37735374 | 37736018 | 37735374 | ID=cds.MS.gene30841.t1;Parent=MS.gene30841.t1 |
Gene Sequence |
Protein sequence |