AlfalfaGEDB | MS.gene49252

M. sativa cultivar XinJiangDaYe / MS.gene49252

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00847.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49252.t1	AGR40679.1	91.8	208	12	2	1	208	15	217	7.20E-101	377.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49252.t1	Q9M0L0	55.6	189	76	3	21	207	29	211	3.1e-44	180.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49252.t1	S5LSQ2	91.8	208	12	2	1	208	15	217	5.2e-101	377.1

TFs/TRs:

Gene ID	Type	Classification
MS.gene49252.t1	TF	AP2/ERF-ERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene79330	MS.gene49252	PPI
MS.gene43298	MS.gene49252	PPI
MS.gene86588	MS.gene49252	PPI
MS.gene49255	MS.gene49252	PPI
MS.gene86615	MS.gene49252	PPI
MS.gene49252	MS.gene86591	PPI
MS.gene86610	MS.gene49252	PPI
MS.gene86596	MS.gene49252	PPI
MS.gene86595	MS.gene49252	PPI
MS.gene49252	MS.gene30853	PPI
MS.gene30842	MS.gene49252	PPI
MS.gene79315	MS.gene49252	PPI
MS.gene86613	MS.gene49252	PPI
MS.gene49250	MS.gene49252	PPI
MS.gene62760	MS.gene49252	PPI
MS.gene30851	MS.gene49252	PPI
MS.gene30848	MS.gene49252	PPI
MS.gene86608	MS.gene49252	PPI
MS.gene49252	MS.gene79320	PPI
MS.gene79327	MS.gene49252	PPI
MS.gene86618	MS.gene49252	PPI
MS.gene49251	MS.gene49252	PPI
MS.gene006341	MS.gene49252	PPI
MS.gene49252	MS.gene79316	PPI
MS.gene62758	MS.gene49252	PPI
MS.gene49252	MS.gene79328	PPI
MS.gene49249	MS.gene49252	PPI
MS.gene49252	MS.gene79318	PPI
MS.gene49252	MS.gene79321	PPI
MS.gene86599	MS.gene49252	PPI
MS.gene86611	MS.gene49252	PPI
MS.gene49252	MS.gene49040	PPI
MS.gene49252	MS.gene86612	PPI
MS.gene30852	MS.gene49252	PPI
MS.gene79322	MS.gene49252	PPI
MS.gene79326	MS.gene49252	PPI
MS.gene86594	MS.gene49252	PPI
MS.gene41386	MS.gene49252	PPI
MS.gene49252	MS.gene79310	PPI
MS.gene79314	MS.gene49252	PPI
MS.gene49252	MS.gene62759	PPI
MS.gene49252	MS.gene86601	PPI
MS.gene49252	MS.gene79307	PPI
MS.gene34447	MS.gene49252	PPI
MS.gene49253	MS.gene49252	PPI
MS.gene49252	MS.gene86607	PPI
MS.gene30841	MS.gene49252	PPI
MS.gene79320	MS.gene49252	PPI
MS.gene38658	MS.gene49252	PPI
MS.gene86597	MS.gene49252	PPI
MS.gene30844	MS.gene49252	PPI
MS.gene30845	MS.gene49252	PPI
MS.gene49252	MS.gene30840	PPI
MS.gene49252	MS.gene43297	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49252.t1	MTR_6g466000	89.498	219	11	3	3	217	17	227	8.12e-131	370
MS.gene49252.t1	MTR_6g465690	77.928	222	34	2	2	216	22	235	3.17e-115	332
MS.gene49252.t1	MTR_6g465990	80.383	209	15	3	1	205	1	187	1.17e-100	293
MS.gene49252.t1	MTR_6g465430	67.327	202	56	3	16	215	27	220	1.42e-90	269
MS.gene49252.t1	MTR_6g465420	69.072	194	50	4	18	209	29	214	1.76e-90	270
MS.gene49252.t1	MTR_6g465460	63.755	229	64	7	18	237	29	247	2.94e-90	269
MS.gene49252.t1	MTR_6g466130	70.192	208	50	4	1	205	24	222	2.22e-89	265
MS.gene49252.t1	MTR_6g465450	65.596	218	63	5	2	215	12	221	2.00e-87	261
MS.gene49252.t1	MTR_6g465530	70.000	190	54	2	16	205	6	192	4.63e-83	248
MS.gene49252.t1	MTR_6g465510	66.341	205	46	2	16	205	6	202	2.90e-79	239
MS.gene49252.t1	MTR_6g465850	56.735	245	56	5	10	205	30	273	6.97e-68	213
MS.gene49252.t1	MTR_1g101600	62.637	182	60	1	9	190	7	180	7.96e-67	207
MS.gene49252.t1	MTR_6g466020	54.634	205	65	3	1	205	1	177	4.22e-61	191
MS.gene49252.t1	MTR_5g010930	52.866	157	60	2	18	160	24	180	2.48e-49	163
MS.gene49252.t1	MTR_5g010940	63.866	119	37	1	18	130	29	147	1.86e-47	158
MS.gene49252.t1	MTR_5g010910	63.478	115	36	1	22	130	28	142	4.06e-46	155
MS.gene49252.t1	MTR_4g102660	74.038	104	24	2	18	118	19	122	1.17e-44	151
MS.gene49252.t1	MTR_3g110205	58.947	95	39	0	38	132	38	132	1.73e-33	121
MS.gene49252.t1	MTR_8g006410	67.949	78	25	0	40	117	49	126	2.93e-32	118
MS.gene49252.t1	MTR_7g046260	59.341	91	37	0	27	117	45	135	1.06e-31	117
MS.gene49252.t1	MTR_5g012910	63.291	79	29	0	39	117	24	102	2.53e-30	112
MS.gene49252.t1	MTR_7g117690	59.091	88	36	0	30	117	15	102	1.30e-29	110
MS.gene49252.t1	MTR_2g085015	44.828	145	65	4	37	179	41	172	2.83e-29	111
MS.gene49252.t1	MTR_8g013860	54.639	97	43	1	22	117	25	121	3.43e-29	110
MS.gene49252.t1	MTR_2g101340	53.465	101	41	2	23	117	15	115	1.13e-28	109
MS.gene49252.t1	MTR_8g102800	57.647	85	36	0	33	117	27	111	1.28e-28	109
MS.gene49252.t1	MTR_6g088405	60.256	78	31	0	40	117	41	118	9.74e-28	107
MS.gene49252.t1	MTR_8g027465	53.000	100	41	2	21	117	20	116	2.38e-26	102
MS.gene49252.t1	MTR_4g100650	60.256	78	31	0	40	117	71	148	6.32e-26	103
MS.gene49252.t1	MTR_4g102670	56.962	79	33	1	39	117	11	88	5.61e-24	95.9
MS.gene49252.t1	MTR_6g088425	49.123	114	48	1	21	124	17	130	8.01e-24	97.1
MS.gene49252.t1	MTR_4g035430	48.454	97	45	1	28	124	22	113	1.59e-23	95.9
MS.gene49252.t1	MTR_1g006660	56.383	94	37	1	28	117	28	121	1.50e-22	94.4
MS.gene49252.t1	MTR_5g008590	52.041	98	47	0	43	140	11	108	8.13e-20	85.1
MS.gene49252.t1	MTR_2g435590	42.574	101	58	0	12	112	65	165	1.87e-17	80.1
MS.gene49252.t1	MTR_5g008550	43.860	114	56	2	43	148	21	134	4.00e-17	78.2
MS.gene49252.t1	MTR_1g014780	55.000	60	27	0	42	101	37	96	1.48e-16	77.4
MS.gene49252.t1	MTR_5g083340	60.345	58	23	0	43	100	85	142	3.02e-16	78.6
MS.gene49252.t1	MTR_2g105380	48.611	72	37	0	31	102	105	176	4.59e-16	77.8
MS.gene49252.t1	MTR_5g008470	44.048	84	47	0	45	128	77	160	5.07e-16	74.7
MS.gene49252.t1	MTR_3g102100	58.929	56	23	0	43	98	45	100	5.75e-16	74.3
MS.gene49252.t1	MTR_2g043050	34.400	125	74	1	42	166	18	134	1.44e-15	74.3
MS.gene49252.t1	MTR_1g090170	55.738	61	27	0	38	98	147	207	1.64e-15	75.5
MS.gene49252.t1	MTR_2g015050	43.820	89	45	2	15	98	102	190	1.66e-15	75.1
MS.gene49252.t1	MTR_5g062700	57.627	59	25	0	42	100	172	230	1.88e-15	75.9
MS.gene49252.t1	MTR_3g074130	59.649	57	23	0	42	98	149	205	2.02e-15	75.5
MS.gene49252.t1	MTR_3g105510	42.353	85	49	0	43	127	37	121	2.09e-15	74.3
MS.gene49252.t1	MTR_7g020980	43.210	81	46	0	39	119	47	127	2.29e-15	72.8
MS.gene49252.t1	MTR_8g090350	57.895	57	24	0	42	98	112	168	2.50e-15	74.7
MS.gene49252.t1	MTR_1g087920	50.000	66	33	0	33	98	67	132	2.67e-15	75.1
MS.gene49252.t1	MTR_1g090170	55.738	61	27	0	38	98	234	294	3.03e-15	75.5
MS.gene49252.t1	MTR_2g090235	57.627	59	25	0	42	100	217	275	3.36e-15	75.5
MS.gene49252.t1	MTR_1g014860	52.459	61	29	0	38	98	17	77	3.79e-15	73.2
MS.gene49252.t1	MTR_1g019110	43.023	86	46	1	43	128	44	126	4.07e-15	72.0
MS.gene49252.t1	MTR_7g021010	54.688	64	28	1	36	98	4	67	4.22e-15	70.9
MS.gene49252.t1	MTR_2g043030	40.659	91	54	0	42	132	18	108	4.81e-15	72.4
MS.gene49252.t1	MTR_7g021010	53.333	60	28	0	39	98	47	106	5.63e-15	71.6
MS.gene49252.t1	MTR_4g086220	58.929	56	23	0	43	98	96	151	5.69e-15	72.8
MS.gene49252.t1	MTR_1g014820	56.140	57	25	0	42	98	26	82	6.66e-15	73.2
MS.gene49252.t1	MTR_5g083330	50.685	73	36	0	28	100	20	92	7.50e-15	73.6
MS.gene49252.t1	MTR_3g053690	57.812	64	24	1	35	98	22	82	8.56e-15	72.4
MS.gene49252.t1	MTR_1g060910	41.584	101	37	2	27	125	3	83	8.77e-15	71.2
MS.gene49252.t1	MTR_2g078680	58.929	56	23	0	43	98	31	86	1.28e-14	71.2
MS.gene49252.t1	MTR_8g092460	54.237	59	27	0	43	101	145	203	1.33e-14	73.2
MS.gene49252.t1	MTR_1g014800	51.667	60	29	0	42	101	30	89	1.40e-14	71.6
MS.gene49252.t1	MTR_5g082950	60.714	56	22	0	43	98	66	121	1.59e-14	73.2
MS.gene49252.t1	MTR_2g089170	41.346	104	58	2	43	143	65	168	1.69e-14	70.9
MS.gene49252.t1	MTR_4g086160	57.143	56	24	0	43	98	96	151	1.74e-14	71.6
MS.gene49252.t1	MTR_1g028560	56.140	57	25	0	43	99	115	171	1.77e-14	72.8
MS.gene49252.t1	MTR_8g022820	48.571	70	36	0	33	102	114	183	1.93e-14	73.2
MS.gene49252.t1	MTR_8g022820	48.571	70	36	0	33	102	114	183	1.93e-14	73.2
MS.gene49252.t1	MTR_8g022820	48.571	70	36	0	33	102	113	182	2.03e-14	73.2
MS.gene49252.t1	MTR_4g086190	57.143	56	24	0	43	98	96	151	2.16e-14	71.2
MS.gene49252.t1	MTR_4g086165	57.143	56	24	0	43	98	82	137	2.56e-14	70.5
MS.gene49252.t1	MTR_5g016750	55.357	56	25	0	43	98	25	80	2.57e-14	70.1
MS.gene49252.t1	MTR_3g105480	42.169	83	48	0	45	127	33	115	4.51e-14	70.5
MS.gene49252.t1	MTR_7g028925	53.333	60	25	1	42	101	28	84	5.33e-14	66.6
MS.gene49252.t1	MTR_0939s0010	57.143	56	24	0	43	98	65	120	5.36e-14	69.3
MS.gene49252.t1	MTR_7g092190	58.929	56	23	0	43	98	30	85	6.15e-14	70.9
MS.gene49252.t1	MTR_1g074310	57.895	57	23	1	43	98	21	77	6.33e-14	68.2
MS.gene49252.t1	MTR_1g101550	39.007	141	83	2	43	181	57	196	8.40e-14	69.7
MS.gene49252.t1	MTR_4g078710	55.357	56	25	0	43	98	28	83	1.66e-13	68.6
MS.gene49252.t1	MTR_4g114570	55.357	56	25	0	43	98	7	62	2.23e-13	68.2
MS.gene49252.t1	MTR_2g438180	57.627	59	24	1	43	100	14	72	2.31e-13	66.2
MS.gene49252.t1	MTR_2g014340	49.296	71	33	1	28	98	7	74	2.51e-13	67.8
MS.gene49252.t1	MTR_5g009620	49.333	75	28	2	30	98	97	167	3.88e-13	68.9
MS.gene49252.t1	MTR_1g048610	54.386	57	25	1	43	98	89	145	4.11e-13	67.8
MS.gene49252.t1	MTR_4g010640	55.357	56	25	0	43	98	7	62	4.34e-13	67.4
MS.gene49252.t1	MTR_3g106290	58.929	56	23	0	43	98	8	63	4.38e-13	66.6
MS.gene49252.t1	MTR_1g070070	54.386	57	25	1	43	98	21	77	5.12e-13	65.5
MS.gene49252.t1	MTR_4g008860	58.929	56	23	0	43	98	8	63	6.68e-13	66.2
MS.gene49252.t1	MTR_2g016730	41.111	90	47	2	32	120	11	95	6.90e-13	68.2
MS.gene49252.t1	MTR_1g074230	56.140	57	24	1	43	98	19	75	9.13e-13	64.7
MS.gene49252.t1	MTR_4g100450	43.373	83	46	1	17	98	128	210	9.19e-13	67.8
MS.gene49252.t1	MTR_2g014300	57.143	56	24	0	43	98	15	70	9.98e-13	65.5
MS.gene49252.t1	MTR_2g103700	53.571	56	26	0	43	98	7	62	1.17e-12	65.5
MS.gene49252.t1	MTR_4g100420	56.140	57	24	1	43	98	157	213	1.74e-12	67.0
MS.gene49252.t1	MTR_1g074250	52.459	61	27	1	40	98	16	76	1.87e-12	63.5
MS.gene49252.t1	MTR_2g043020	38.462	91	56	0	42	132	18	108	1.91e-12	65.5
MS.gene49252.t1	MTR_2g043040	38.824	85	52	0	42	126	18	102	3.07e-12	65.1
MS.gene49252.t1	MTR_3g090760	42.500	80	37	1	19	98	98	168	3.27e-12	66.2
MS.gene49252.t1	MTR_5g085100	47.368	76	37	1	23	98	29	101	4.49e-12	65.5
MS.gene49252.t1	MTR_4g088005	42.045	88	48	2	14	98	26	113	4.70e-12	62.4
MS.gene49252.t1	MTR_4g054360	50.000	64	31	1	36	98	117	180	6.92e-12	64.7
MS.gene49252.t1	MTR_1g090290	47.945	73	34	3	38	108	110	180	9.43e-12	63.2
MS.gene49252.t1	MTR_8g099215	40.000	95	51	1	10	98	68	162	1.08e-11	64.7
MS.gene49252.t1	MTR_5g085070	52.381	63	27	1	36	98	47	106	1.11e-11	64.3
MS.gene49252.t1	MTR_8g069360	51.786	56	27	0	43	98	44	99	1.51e-11	64.7
MS.gene49252.t1	MTR_4g111915	45.763	59	32	0	43	101	53	111	1.70e-11	61.2
MS.gene49252.t1	MTR_8g032610	33.628	113	60	2	43	140	27	139	1.98e-11	63.5
MS.gene49252.t1	MTR_6g012970	40.000	95	45	2	19	113	22	104	2.18e-11	64.3
MS.gene49252.t1	MTR_4g054740	48.438	64	32	1	36	98	90	153	2.30e-11	62.8
MS.gene49252.t1	MTR_5g075570	46.667	60	32	0	39	98	120	179	2.59e-11	63.2
MS.gene49252.t1	MTR_5g032820	53.571	56	26	0	43	98	46	101	4.27e-11	63.2
MS.gene49252.t1	MTR_8g006840	50.877	57	27	1	43	98	125	181	5.37e-11	61.2
MS.gene49252.t1	MTR_4g112490	45.763	59	32	0	43	101	53	111	5.58e-11	61.2
MS.gene49252.t1	MTR_5g008540	45.902	61	33	0	45	105	26	86	6.12e-11	58.5
MS.gene49252.t1	MTR_6g029180	46.479	71	37	1	28	98	19	88	7.03e-11	62.0
MS.gene49252.t1	MTR_1g070020	30.216	139	89	4	33	165	60	196	7.07e-11	61.2
MS.gene49252.t1	MTR_4g100380	54.386	57	25	1	43	98	145	201	7.38e-11	61.6
MS.gene49252.t1	MTR_2g015040	50.877	57	27	1	43	98	63	119	7.66e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49252.t1	AT4G25470	57.471	174	72	1	20	191	28	201	1.17e-59	189
MS.gene49252.t1	AT5G51990	54.301	186	76	3	20	201	31	211	6.12e-59	187
MS.gene49252.t1	AT4G25480	62.112	161	58	1	21	181	29	186	2.37e-56	181
MS.gene49252.t1	AT4G25490	63.804	163	53	3	21	181	26	184	5.87e-54	174
MS.gene49252.t1	AT1G12610	68.421	114	36	0	16	129	3	116	2.44e-53	173
MS.gene49252.t1	AT1G63030	66.667	114	38	0	16	129	3	116	2.70e-53	172
MS.gene49252.t1	AT1G63030	66.667	114	38	0	16	129	3	116	2.70e-53	172
MS.gene49252.t1	AT5G25810	59.574	94	37	1	32	124	24	117	2.48e-33	121
MS.gene49252.t1	AT5G11590	50.000	122	54	2	3	124	18	132	3.80e-32	119
MS.gene49252.t1	AT4G32800	54.737	95	43	0	30	124	6	100	2.44e-31	116
MS.gene49252.t1	AT2G44940	61.290	93	36	0	32	124	89	181	3.52e-31	118
MS.gene49252.t1	AT2G35700	62.500	80	30	0	38	117	40	119	1.48e-29	111
MS.gene49252.t1	AT1G01250	51.402	107	49	1	14	117	13	119	2.51e-28	107
MS.gene49252.t1	AT3G16280	60.759	79	31	0	39	117	57	135	4.68e-28	108
MS.gene49252.t1	AT4G16750	50.000	112	50	2	13	118	4	115	6.16e-28	106
MS.gene49252.t1	AT3G16280	60.759	79	31	0	39	117	75	153	6.99e-28	108
MS.gene49252.t1	AT2G25820	61.842	76	29	0	42	117	25	100	2.89e-26	103
MS.gene49252.t1	AT3G60490	61.333	75	29	0	43	117	71	145	7.49e-26	103
MS.gene49252.t1	AT2G36450	43.396	159	83	4	31	185	3	158	3.67e-24	96.7
MS.gene49252.t1	AT1G71450	39.041	146	79	1	42	187	23	158	1.72e-23	94.7
MS.gene49252.t1	AT2G47520	43.299	97	51	1	2	98	13	105	3.31e-20	85.9
MS.gene49252.t1	AT1G77200	58.442	77	32	0	41	117	41	117	3.74e-19	84.7
MS.gene49252.t1	AT5G52020	37.430	179	78	6	39	204	61	218	3.77e-19	84.3
MS.gene49252.t1	AT1G33760	51.685	89	43	0	43	131	20	108	1.09e-18	82.0
MS.gene49252.t1	AT4G13620	46.809	94	42	2	8	100	203	289	1.44e-18	85.1
MS.gene49252.t1	AT1G21910	45.652	92	43	1	43	127	50	141	1.79e-18	82.4
MS.gene49252.t1	AT3G16770	53.846	78	29	1	23	100	66	136	1.08e-17	80.9
MS.gene49252.t1	AT1G46768	57.143	63	26	1	38	100	27	88	1.82e-17	77.8
MS.gene49252.t1	AT1G46768	57.143	63	26	1	38	100	27	88	1.82e-17	77.8
MS.gene49252.t1	AT1G46768	57.143	63	26	1	38	100	27	88	1.86e-17	77.4
MS.gene49252.t1	AT1G22190	53.425	73	32	1	28	100	70	140	3.40e-17	79.7
MS.gene49252.t1	AT4G39780	57.377	61	26	0	38	98	88	148	6.15e-17	79.0
MS.gene49252.t1	AT5G21960	46.429	84	45	0	41	124	5	88	7.14e-17	77.8
MS.gene49252.t1	AT2G22200	59.649	57	23	0	42	98	70	126	7.20e-16	75.9
MS.gene49252.t1	AT4G06746	51.613	62	30	0	43	104	36	97	7.48e-16	73.6
MS.gene49252.t1	AT1G19210	31.285	179	91	5	43	216	12	163	7.96e-16	74.3
MS.gene49252.t1	AT1G78080	57.627	59	25	0	42	100	151	209	1.26e-15	76.3
MS.gene49252.t1	AT4G36900	55.000	60	27	0	39	98	26	85	1.52e-15	73.9
MS.gene49252.t1	AT2G20880	38.393	112	67	1	19	130	165	274	1.56e-15	75.9
MS.gene49252.t1	AT1G71520	36.232	138	66	4	37	168	8	129	1.58e-15	72.4
MS.gene49252.t1	AT1G12630	60.811	74	28	1	39	112	15	87	1.66e-15	73.6
MS.gene49252.t1	AT3G50260	44.681	94	41	3	36	124	14	101	1.92e-15	72.4
MS.gene49252.t1	AT5G65130	44.211	95	41	2	18	100	74	168	1.94e-15	75.1
MS.gene49252.t1	AT2G33710	46.341	82	39	1	38	114	65	146	2.04e-15	73.9
MS.gene49252.t1	AT5G65130	44.211	95	41	2	18	100	76	170	2.21e-15	74.7
MS.gene49252.t1	AT2G33710	46.341	82	39	1	38	114	65	146	2.35e-15	73.9
MS.gene49252.t1	AT5G67190	41.414	99	51	2	43	137	21	116	2.42e-15	72.8
MS.gene49252.t1	AT3G11020	55.385	65	29	0	37	101	72	136	2.89e-15	75.1
MS.gene49252.t1	AT2G23340	57.143	56	24	0	43	98	28	83	3.35e-15	72.4
MS.gene49252.t1	AT1G36060	59.649	57	23	0	42	98	142	198	4.35e-15	74.3
MS.gene49252.t1	AT1G74930	41.860	86	50	0	43	128	21	106	6.11e-15	72.0
MS.gene49252.t1	AT5G05410	57.627	59	25	0	43	101	79	137	6.22e-15	73.9
MS.gene49252.t1	AT5G05410	58.929	56	23	0	43	98	79	134	7.48e-15	73.9
MS.gene49252.t1	AT4G28140	54.237	59	27	0	42	100	142	200	7.84e-15	73.6
MS.gene49252.t1	AT1G75490	39.806	103	61	1	12	113	10	112	1.09e-14	71.6
MS.gene49252.t1	AT5G13330	50.685	73	31	2	39	111	37	104	1.31e-14	71.6
MS.gene49252.t1	AT3G15210	58.929	56	23	0	43	98	25	80	1.57e-14	71.6
MS.gene49252.t1	AT5G07580	49.367	79	37	2	37	114	106	182	1.75e-14	71.2
MS.gene49252.t1	AT4G11140	44.444	81	36	2	43	123	87	158	2.07e-14	72.4
MS.gene49252.t1	AT5G44210	52.174	69	28	1	43	111	33	96	2.86e-14	70.5
MS.gene49252.t1	AT1G72360	41.304	92	52	1	23	112	54	145	3.84e-14	71.2
MS.gene49252.t1	AT5G61890	55.000	60	25	1	39	98	88	145	4.69e-14	70.5
MS.gene49252.t1	AT5G61600	59.016	61	22	2	39	98	86	144	4.91e-14	70.5
MS.gene49252.t1	AT3G57600	57.143	56	24	0	43	98	28	83	5.33e-14	70.9
MS.gene49252.t1	AT5G47230	42.424	99	46	4	1	98	124	212	6.34e-14	70.9
MS.gene49252.t1	AT1G03800	50.000	68	31	1	31	98	44	108	7.98e-14	70.1
MS.gene49252.t1	AT4G31060	41.237	97	49	3	33	126	22	113	1.04e-13	68.6
MS.gene49252.t1	AT1G72360	44.304	79	42	1	36	112	18	96	1.10e-13	68.9
MS.gene49252.t1	AT1G15360	57.143	56	24	0	43	98	7	62	1.22e-13	68.6
MS.gene49252.t1	AT1G15360	57.143	56	24	0	43	98	7	62	1.22e-13	68.6
MS.gene49252.t1	AT5G51190	55.556	63	25	2	37	98	68	128	1.37e-13	68.9
MS.gene49252.t1	AT1G72360	44.304	79	42	1	36	112	69	147	1.87e-13	69.3
MS.gene49252.t1	AT4G27950	55.357	56	25	0	43	98	118	173	2.23e-13	69.7
MS.gene49252.t1	AT1G22810	39.785	93	41	2	43	127	14	99	2.56e-13	66.2
MS.gene49252.t1	AT5G43410	53.333	60	27	1	40	98	12	71	2.59e-13	66.2
MS.gene49252.t1	AT5G64750	45.714	70	37	1	53	122	195	263	4.30e-13	69.3
MS.gene49252.t1	AT3G61630	30.882	136	80	3	43	173	105	231	5.98e-13	68.2
MS.gene49252.t1	AT5G25390	53.571	56	26	0	43	98	7	62	6.69e-13	66.2
MS.gene49252.t1	AT5G19790	47.436	78	37	2	24	100	5	79	7.55e-13	67.4
MS.gene49252.t1	AT3G23230	54.386	57	25	1	43	98	20	76	1.10e-12	64.7
MS.gene49252.t1	AT3G20310	51.613	62	30	0	37	98	21	82	1.17e-12	66.6
MS.gene49252.t1	AT5G53290	52.632	57	27	0	43	99	125	181	1.82e-12	67.0
MS.gene49252.t1	AT5G25190	57.143	56	24	0	43	98	8	63	2.40e-12	64.7
MS.gene49252.t1	AT1G28370	53.571	56	26	0	43	98	20	75	2.68e-12	64.3
MS.gene49252.t1	AT1G28360	57.143	56	24	0	43	98	12	67	2.99e-12	64.7
MS.gene49252.t1	AT2G40340	46.377	69	37	0	43	111	14	82	4.28e-12	65.5
MS.gene49252.t1	AT2G40340	46.377	69	37	0	43	111	14	82	4.28e-12	65.5
MS.gene49252.t1	AT2G40340	46.377	69	37	0	43	111	14	82	4.28e-12	65.5
MS.gene49252.t1	AT1G28370	53.571	56	26	0	43	98	58	113	4.59e-12	64.3
MS.gene49252.t1	AT5G18450	54.386	57	26	0	42	98	33	89	4.62e-12	65.5
MS.gene49252.t1	AT1G50640	55.357	56	25	0	43	98	28	83	5.96e-12	64.3
MS.gene49252.t1	AT4G17490	53.125	64	27	2	36	98	132	193	6.97e-12	65.1
MS.gene49252.t1	AT4G23750	50.877	57	28	0	43	99	122	178	7.00e-12	65.5
MS.gene49252.t1	AT4G23750	50.877	57	28	0	43	99	122	178	7.00e-12	65.5
MS.gene49252.t1	AT2G40340	46.377	69	37	0	43	111	72	140	9.90e-12	64.7
MS.gene49252.t1	AT5G47220	54.386	57	25	1	43	98	117	173	1.01e-11	63.9
MS.gene49252.t1	AT2G40340	46.377	69	37	0	43	111	72	140	1.05e-11	64.7
MS.gene49252.t1	AT2G40340	46.377	69	37	0	43	111	79	147	1.12e-11	64.7
MS.gene49252.t1	AT5G61590	49.425	87	41	2	29	114	95	179	2.03e-11	62.4
MS.gene49252.t1	AT1G12890	42.308	78	42	1	21	98	2	76	2.42e-11	62.4
MS.gene49252.t1	AT2G46310	50.000	56	28	0	43	98	99	154	2.48e-11	63.5
MS.gene49252.t1	AT3G23240	33.333	129	77	5	43	165	82	207	5.34e-11	61.6
MS.gene49252.t1	AT4G17500	54.386	57	25	1	43	98	148	204	5.71e-11	62.0
MS.gene49252.t1	AT2G40350	50.000	56	28	0	43	98	74	129	7.36e-11	60.1
MS.gene49252.t1	AT1G12980	53.571	56	26	0	43	98	57	112	8.88e-11	62.0
MS.gene49252.t1	AT2G40350	50.000	56	28	0	43	98	67	122	9.78e-11	59.7

Find 106 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCCTGAGTAGTGGCAGGTTT+GGG	0.159834	6.4:-37565749	None:intergenic
CTTATTTCTTACATCATAAA+AGG	0.193744	6.4:-37566254	None:intergenic
TCCTCCCTGCACGCTTCTTC+GGG	0.219651	6.4:-37565508	None:intergenic
CAATGAGAGCCCTCTGAATT+TGG	0.227014	6.4:-37565443	None:intergenic
GGAAGAGGAACTTAGATAAA+TGG	0.239856	6.4:+37565573	MS.gene49252:CDS
TTCCTCCCTGCACGCTTCTT+CGG	0.258479	6.4:-37565509	None:intergenic
AGACACGCCACCCGGTTTAT+AGG	0.285335	6.4:+37565543	MS.gene49252:CDS
CAGATCTTAGTCTTCTTGTT+TGG	0.304643	6.4:-37565614	None:intergenic
TGCCTGAGTAGTGGCAGGTT+TGG	0.308044	6.4:-37565750	None:intergenic
GACACGCCACCCGGTTTATA+GGG	0.319825	6.4:+37565544	MS.gene49252:CDS
GGAGCAGAGTATGACTTATA+TGG	0.358713	6.4:+37565901	MS.gene49252:CDS
GCAAGAGATGTGGAGTAATA+TGG	0.359320	6.4:+37565952	MS.gene49252:CDS
ACGATGGGATAACAATGATT+TGG	0.409185	6.4:+37566901	MS.gene49252:CDS
GTGGGCACGGGCTGCCATCT+CGG	0.414126	6.4:-37565657	None:intergenic
TTCCTGACACCCCTATAAAC+CGG	0.416311	6.4:-37565554	None:intergenic
CGGGCTGCCATCTCGGCAGT+TGG	0.432262	6.4:-37565650	None:intergenic
TTAGTTATTAAAGTCTTCTC+TGG	0.435224	6.4:-37565818	None:intergenic
TCCTTTGCCTGAGTAGTGGC+AGG	0.438785	6.4:-37565755	None:intergenic
GAAGAGGAACTTAGATAAAT+GGG	0.443208	6.4:+37565574	MS.gene49252:CDS
ATGTCCCCTACACATAGCTT+GGG	0.453501	6.4:+37565980	MS.gene49252:CDS
ATAAATGGGTTTGTGAAATG+AGG	0.462024	6.4:+37565588	MS.gene49252:CDS
ACCCGGTTTATAGGGGTGTC+AGG	0.465607	6.4:+37565552	MS.gene49252:CDS
TGGAAGAGAAAGAAGAGGGA+GGG	0.470182	6.4:+37565921	MS.gene49252:CDS
GGGCTGCCATCTCGGCAGTT+GGG	0.484394	6.4:-37565649	None:intergenic
GGAGTTGCAATTAGTGGGGA+TGG	0.484566	6.4:-37566775	None:intergenic
CACTGTTATCCCATCATGAA+TGG	0.484743	6.4:-37566835	None:intergenic
CAAATTCAGAGGGCTCTCAT+TGG	0.486857	6.4:+37565444	MS.gene49252:CDS
TTGCAACTCCATCATCATCT+TGG	0.492996	6.4:+37566788	MS.gene49252:CDS
GCGACGGGAAATTGAATTTG+TGG	0.496731	6.4:+37566923	MS.gene49252:CDS
CTGTCTCAACTTTGCAGACT+CGG	0.497832	6.4:+37565715	MS.gene49252:CDS
ACTCTGCTCCTCAGTGGCAG+TGG	0.498509	6.4:-37565888	None:intergenic
ACTACCCCGAAGAAGCGTGC+AGG	0.501276	6.4:+37565503	MS.gene49252:CDS
TGTTGCTGCAATGGCATTGA+GGG	0.503229	6.4:+37565682	MS.gene49252:CDS
TTGCAGCAACATCGTGGGCA+CGG	0.505055	6.4:-37565670	None:intergenic
TAAATGGGTTTGTGAAATGA+GGG	0.505569	6.4:+37565589	MS.gene49252:CDS
TCGTGAATCACAGTTGCAAA+TGG	0.507100	6.4:-37566882	None:intergenic
CCGTTTGCAACCATTCATGA+TGG	0.508596	6.4:+37566825	MS.gene49252:CDS
AATGTCCCCTACACATAGCT+TGG	0.508664	6.4:+37565979	MS.gene49252:CDS
CACTTTCCCAACTGCCGAGA+TGG	0.515783	6.4:+37565643	MS.gene49252:CDS
TGCAGCAACATCGTGGGCAC+GGG	0.517231	6.4:-37565669	None:intergenic
AGTAGCGACAACCCCTTCCT+AGG	0.517886	6.4:+37566950	MS.gene49252:CDS
TTTCGTTTGGACCTAGGAAG+GGG	0.523127	6.4:-37566961	None:intergenic
TTTATAGGGGTGTCAGGAAG+AGG	0.526313	6.4:+37565558	MS.gene49252:CDS
CAAACAAGAAGACTAAGATC+TGG	0.529287	6.4:+37565615	MS.gene49252:CDS
CCTGAGTAGTGGCAGGTTTG+GGG	0.529535	6.4:-37565748	None:intergenic
CGTTTCGTTTGGACCTAGGA+AGG	0.530927	6.4:-37566963	None:intergenic
CCATCATGAATGGTTGCAAA+CGG	0.531419	6.4:-37566825	None:intergenic
CGAGTCTGCAAAGTTGAGAC+AGG	0.531819	6.4:-37565714	None:intergenic
GATAACAATGATTTGGCGAC+GGG	0.532786	6.4:+37566908	MS.gene49252:CDS
TGCCCACGATGTTGCTGCAA+TGG	0.534737	6.4:+37565673	MS.gene49252:CDS
CAACGAGGAGATGCGGTTAG+CGG	0.537829	6.4:+37565478	MS.gene49252:CDS
GAAAGCCTCGGCGGCCTCTG+TGG	0.537838	6.4:-37565792	None:intergenic
AGCAGCCACAGAGGCCGCCG+AGG	0.545548	6.4:+37565787	MS.gene49252:CDS
AATACCCCAAGCTATGTGTA+GGG	0.546739	6.4:-37565985	None:intergenic
TATATCCTTTGCCTGAGTAG+TGG	0.549868	6.4:-37565759	None:intergenic
CCCCAAACCTGCCACTACTC+AGG	0.549875	6.4:+37565748	MS.gene49252:CDS
AAGAAGACTAAGATCTGGCT+AGG	0.550572	6.4:+37565620	MS.gene49252:CDS
GATGATGGAGTTGCAATTAG+TGG	0.551468	6.4:-37566781	None:intergenic
TATATGGAAGAGAAAGAAGA+GGG	0.555424	6.4:+37565917	MS.gene49252:CDS
TAATACCCCAAGCTATGTGT+AGG	0.555886	6.4:-37565986	None:intergenic
ATGATGGAGTTGCAATTAGT+GGG	0.556623	6.4:-37566780	None:intergenic
ATGGAAGAGAAAGAAGAGGG+AGG	0.560034	6.4:+37565920	MS.gene49252:CDS
TGCAGGGAGGAAGAAGTTCA+AGG	0.566465	6.4:+37565520	MS.gene49252:CDS
TCAACTTTGCAGACTCGGCA+TGG	0.569320	6.4:+37565720	MS.gene49252:CDS
CATGTCGCTGCCAAATTCAG+AGG	0.572301	6.4:+37565433	None:intergenic
CTACCCCGAAGAAGCGTGCA+GGG	0.573279	6.4:+37565504	MS.gene49252:CDS
GTTTCGTTTGGACCTAGGAA+GGG	0.576347	6.4:-37566962	None:intergenic
CGTTTGCAACCATTCATGAT+GGG	0.576785	6.4:+37566826	MS.gene49252:CDS
ATGTTGCTGCAATGGCATTG+AGG	0.577402	6.4:+37565681	MS.gene49252:CDS
TTGCAACTGTGATTCACGAT+GGG	0.579581	6.4:+37566886	MS.gene49252:CDS
TTATATGGAAGAGAAAGAAG+AGG	0.582226	6.4:+37565916	MS.gene49252:CDS
GGGATAACAGTGATTCGCGA+TGG	0.583947	6.4:+37566846	MS.gene49252:CDS
GGTTGCAAACGGCGTTGGTG+TGG	0.586156	6.4:-37566814	None:intergenic
GAGTTGCAATTAGTGGGGAT+GGG	0.588354	6.4:-37566774	None:intergenic
TCCTGACACCCCTATAAACC+GGG	0.590098	6.4:-37565553	None:intergenic
ACCTGCCACTACTCAGGCAA+AGG	0.590128	6.4:+37565754	MS.gene49252:CDS
GGATAACAGTGATTCGCGAT+GGG	0.590731	6.4:+37566847	MS.gene49252:CDS
ATCACAGTTGCAAATGGCGT+TGG	0.592353	6.4:-37566876	None:intergenic
GGATAACAATGATTTGGCGA+CGG	0.594460	6.4:+37566907	MS.gene49252:CDS
TCATGAAGACTTTCAAGATG+AGG	0.595360	6.4:+37566024	MS.gene49252:CDS
GGATGAACATGCAAGAGATG+TGG	0.599371	6.4:+37565942	MS.gene49252:CDS
TGCCATTGCAGCAACATCGT+GGG	0.601918	6.4:-37565675	None:intergenic
CCTCCCTGCACGCTTCTTCG+GGG	0.602866	6.4:-37565507	None:intergenic
TGAATGGTTGCAAACGGCGT+TGG	0.605406	6.4:-37566819	None:intergenic
GTTCAAGGAGACACGCCACC+CGG	0.609974	6.4:+37565535	MS.gene49252:CDS
CAATTTGCAACGAGGAGATG+CGG	0.612141	6.4:+37565471	MS.gene49252:CDS
TGTGGAGACCAAGATGATGA+TGG	0.616588	6.4:-37566796	None:intergenic
TGAAGACTTTCAAGATGAGG+AGG	0.616618	6.4:+37566027	MS.gene49252:CDS
CTTCTCTGGTCTGAAAGCCT+CGG	0.617495	6.4:-37565804	None:intergenic
CAAAGTTGAGACAGGCGTAA+CGG	0.618191	6.4:-37565706	None:intergenic
TTTGCAACTGTGATTCACGA+TGG	0.631481	6.4:+37566885	MS.gene49252:CDS
ACACGCCACCCGGTTTATAG+GGG	0.636903	6.4:+37565545	MS.gene49252:CDS
ATGTCGCTGCCAAATTCAGA+GGG	0.643180	6.4:+37565434	MS.gene49252:CDS
CTCTGGTCTGAAAGCCTCGG+CGG	0.646576	6.4:-37565801	None:intergenic
ATGCCATTGCAGCAACATCG+TGG	0.653937	6.4:-37565676	None:intergenic
GTTGCTGCAATGGCATTGAG+GGG	0.673414	6.4:+37565683	MS.gene49252:CDS
TGTCCCCTACACATAGCTTG+GGG	0.686152	6.4:+37565981	MS.gene49252:CDS
ATACCCCAAGCTATGTGTAG+GGG	0.696232	6.4:-37565984	None:intergenic
TGATGGAGTTGCAATTAGTG+GGG	0.697833	6.4:-37566779	None:intergenic
AGTCATACTCTGCTCCTCAG+TGG	0.699704	6.4:-37565894	None:intergenic
CAATGATAAAGAGAATGACA+TGG	0.705724	6.4:+37565850	MS.gene49252:CDS
TTGGATGTCAATTTGCAACG+AGG	0.722352	6.4:+37565463	MS.gene49252:CDS
TGACACCCCTATAAACCGGG+TGG	0.732415	6.4:-37565550	None:intergenic
TGACACTGCCACTGCCACTG+AGG	0.733542	6.4:+37565880	MS.gene49252:CDS
CCCCGAAGAAGCGTGCAGGG+AGG	0.736169	6.4:+37565507	MS.gene49252:CDS
ACTTTGCAGACTCGGCATGG+CGG	0.774719	6.4:+37565723	MS.gene49252:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAATAAATGTAAACCAAA+TGG	-	chr6.4:37566109-37566128	None:intergenic	15.0%
!!	ATTCAAGTATTTATGTATAT+TGG	+	chr6.4:37566301-37566320	MS.gene49252:intron	15.0%
!!	TAATTTAATTAGCTAAACAT+GGG	-	chr6.4:37566377-37566396	None:intergenic	15.0%
!!!	GGTTTACATTTATTTATTTT+TGG	+	chr6.4:37566112-37566131	MS.gene49252:intron	15.0%
!!!	GTAAGAAATAAGAAATATTT+TGG	+	chr6.4:37566265-37566284	MS.gene49252:intron	15.0%
!!!	TTAAATTTTTTGTAGGAAAA+TGG	+	chr6.4:37566066-37566085	MS.gene49252:intron	15.0%
!!	GTAATTTAATTAGCTAAACA+TGG	-	chr6.4:37566378-37566397	None:intergenic	20.0%
!!	TATTTATGTATATTGGCATT+TGG	+	chr6.4:37566308-37566327	MS.gene49252:intron	20.0%
!!!	CTTATTTCTTACATCATAAA+AGG	-	chr6.4:37566257-37566276	None:intergenic	20.0%
!!!	TATAGATTGCAACAATTTTT+TGG	+	chr6.4:37566454-37566473	MS.gene49252:intron	20.0%
!!!	TTTTTTTAGTTTGATCCATT+TGG	+	chr6.4:37566091-37566110	MS.gene49252:intron	20.0%
!	AAAAGAGAGAAAAAACCAAA+GGG	-	chr6.4:37566671-37566690	None:intergenic	25.0%
!	AAAGAATCCGTCTATTAAAA+AGG	-	chr6.4:37566151-37566170	None:intergenic	25.0%
!	CTTTCCTTGTAATAAATGAA+CGG	-	chr6.4:37566604-37566623	None:intergenic	25.0%
!	TTAGTTATTAAAGTCTTCTC+TGG	-	chr6.4:37565821-37565840	None:intergenic	25.0%
!	TTATTACAAGGAAAGATCAA+TGG	+	chr6.4:37566609-37566628	MS.gene49252:intron	25.0%
!	TTGGAATTAAAACACATGAA+TGG	+	chr6.4:37566633-37566652	MS.gene49252:intron	25.0%
!!	CTTTTGAACAAGTAAGATTA+AGG	-	chr6.4:37566753-37566772	None:intergenic	25.0%
!!	GATTCTTTATAGGTTGAAAT+TGG	+	chr6.4:37566163-37566182	MS.gene49252:intron	25.0%
!!	GTACAAACCTTTTTAATAGA+CGG	+	chr6.4:37566141-37566160	MS.gene49252:intron	25.0%
!!	TTAATAGACGGATTCTTTAT+AGG	+	chr6.4:37566153-37566172	MS.gene49252:intron	25.0%
!!!	AATTTTTTGGTCATTTTTCG+AGG	+	chr6.4:37566467-37566486	MS.gene49252:intron	25.0%
!!!	GGAGTTGTTAAATTTTTTGT+AGG	+	chr6.4:37566059-37566078	MS.gene49252:intron	25.0%
	AGAACTGGAGAAAAATTACA+CGG	-	chr6.4:37566562-37566581	None:intergenic	30.0%
	CAAAAGAGAGAAAAAACCAA+AGG	-	chr6.4:37566672-37566691	None:intergenic	30.0%
	CAATGATAAAGAGAATGACA+TGG	+	chr6.4:37565850-37565869	MS.gene49252:CDS	30.0%
	GAAGAGGAACTTAGATAAAT+GGG	+	chr6.4:37565574-37565593	MS.gene49252:CDS	30.0%
	TATATGGAAGAGAAAGAAGA+GGG	+	chr6.4:37565917-37565936	MS.gene49252:CDS	30.0%
	TGAACAAGTAAGATTAAGGT+GGG	-	chr6.4:37566749-37566768	None:intergenic	30.0%
	TGAGGAAAAAAAGGTGAAAA+CGG	-	chr6.4:37566721-37566740	None:intergenic	30.0%
	TTATATGGAAGAGAAAGAAG+AGG	+	chr6.4:37565916-37565935	MS.gene49252:CDS	30.0%
	TTGAACAAGTAAGATTAAGG+TGG	-	chr6.4:37566750-37566769	None:intergenic	30.0%
!	ATAAATGGGTTTGTGAAATG+AGG	+	chr6.4:37565588-37565607	MS.gene49252:CDS	30.0%
!	TAAATGGGTTTGTGAAATGA+GGG	+	chr6.4:37565589-37565608	MS.gene49252:CDS	30.0%
	AACTCTCGCAAAATATTACG+CGG	-	chr6.4:37566503-37566522	None:intergenic	35.0%
	ACAAGGAAAGATCAATGGAT+TGG	+	chr6.4:37566614-37566633	MS.gene49252:intron	35.0%
	ACGATGGGATAACAATGATT+TGG	+	chr6.4:37566901-37566920	MS.gene49252:CDS	35.0%
	CAAACAAGAAGACTAAGATC+TGG	+	chr6.4:37565615-37565634	MS.gene49252:CDS	35.0%
	GAACTGGAGAAAAATTACAC+GGG	-	chr6.4:37566561-37566580	None:intergenic	35.0%
	GAGGAAAAAAAGGTGAAAAC+GGG	-	chr6.4:37566720-37566739	None:intergenic	35.0%
	GGAAGAGGAACTTAGATAAA+TGG	+	chr6.4:37565573-37565592	MS.gene49252:CDS	35.0%
	TCAGCCGTTCATTTATTACA+AGG	+	chr6.4:37566597-37566616	MS.gene49252:intron	35.0%
	TCATGAAGACTTTCAAGATG+AGG	+	chr6.4:37566024-37566043	MS.gene49252:CDS	35.0%
!	ATGATGGAGTTGCAATTAGT+GGG	-	chr6.4:37566783-37566802	None:intergenic	35.0%
!	CAGATCTTAGTCTTCTTGTT+TGG	-	chr6.4:37565617-37565636	None:intergenic	35.0%
!!	TGGGTTTTGTGAGGAAAAAA+AGG	-	chr6.4:37566730-37566749	None:intergenic	35.0%
	AAGAAGACTAAGATCTGGCT+AGG	+	chr6.4:37565620-37565639	MS.gene49252:CDS	40.0%
	AATACCCCAAGCTATGTGTA+GGG	-	chr6.4:37565988-37566007	None:intergenic	40.0%
	ACTCTCGCAAAATATTACGC+GGG	-	chr6.4:37566502-37566521	None:intergenic	40.0%
	AGCTAAACATGGGTAGCAAT+AGG	-	chr6.4:37566367-37566386	None:intergenic	40.0%
	CACTGTTATCCCATCATGAA+TGG	-	chr6.4:37566838-37566857	None:intergenic	40.0%
	CCATCATGAATGGTTGCAAA+CGG	-	chr6.4:37566828-37566847	None:intergenic	40.0%
	CGTTTGCAACCATTCATGAT+GGG	+	chr6.4:37566826-37566845	MS.gene49252:CDS	40.0%
	GCAAGAGATGTGGAGTAATA+TGG	+	chr6.4:37565952-37565971	MS.gene49252:CDS	40.0%
	GGAGCAGAGTATGACTTATA+TGG	+	chr6.4:37565901-37565920	MS.gene49252:CDS	40.0%
	TAATACCCCAAGCTATGTGT+AGG	-	chr6.4:37565989-37566008	None:intergenic	40.0%
	TATACAAAAAGCAGCCACAG+AGG	+	chr6.4:37565778-37565797	MS.gene49252:CDS	40.0%
	TATATCCTTTGCCTGAGTAG+TGG	-	chr6.4:37565762-37565781	None:intergenic	40.0%
	TCGTGAATCACAGTTGCAAA+TGG	-	chr6.4:37566885-37566904	None:intergenic	40.0%
	TGAAGACTTTCAAGATGAGG+AGG	+	chr6.4:37566027-37566046	MS.gene49252:CDS	40.0%
	TGATGGAGTTGCAATTAGTG+GGG	-	chr6.4:37566782-37566801	None:intergenic	40.0%
	TTGCAACTCCATCATCATCT+TGG	+	chr6.4:37566788-37566807	MS.gene49252:CDS	40.0%
	TTGCAACTGTGATTCACGAT+GGG	+	chr6.4:37566886-37566905	MS.gene49252:CDS	40.0%
	TTGGATGTCAATTTGCAACG+AGG	+	chr6.4:37565463-37565482	MS.gene49252:CDS	40.0%
	TTTGCAACTGTGATTCACGA+TGG	+	chr6.4:37566885-37566904	MS.gene49252:CDS	40.0%
!	GATAACAATGATTTGGCGAC+GGG	+	chr6.4:37566908-37566927	MS.gene49252:CDS	40.0%
!	GGATAACAATGATTTGGCGA+CGG	+	chr6.4:37566907-37566926	MS.gene49252:CDS	40.0%
!!	AAGATGAGGAGGTATCACTT+TGG	+	chr6.4:37566038-37566057	MS.gene49252:intron	40.0%
!!	AGATTAAGGTGGGTTTTGTG+AGG	-	chr6.4:37566739-37566758	None:intergenic	40.0%
!!	GATGATGGAGTTGCAATTAG+TGG	-	chr6.4:37566784-37566803	None:intergenic	40.0%
!!!	TTTTAAAACCCCGCTTGTAC+CGG	+	chr6.4:37566522-37566541	MS.gene49252:intron	40.0%
	AATGTCCCCTACACATAGCT+TGG	+	chr6.4:37565979-37565998	MS.gene49252:CDS	45.0%
	ATACCCCAAGCTATGTGTAG+GGG	-	chr6.4:37565987-37566006	None:intergenic	45.0%
	ATCACAGTTGCAAATGGCGT+TGG	-	chr6.4:37566879-37566898	None:intergenic	45.0%
	ATGGAAGAGAAAGAAGAGGG+AGG	+	chr6.4:37565920-37565939	MS.gene49252:CDS	45.0%
	ATGTCCCCTACACATAGCTT+GGG	+	chr6.4:37565980-37565999	MS.gene49252:CDS	45.0%
	ATGTCGCTGCCAAATTCAGA+GGG	+	chr6.4:37565434-37565453	MS.gene49252:CDS	45.0%
	ATGTTGCTGCAATGGCATTG+AGG	+	chr6.4:37565681-37565700	MS.gene49252:CDS	45.0%
	CAAAGTTGAGACAGGCGTAA+CGG	-	chr6.4:37565709-37565728	None:intergenic	45.0%
	CAAATTCAGAGGGCTCTCAT+TGG	+	chr6.4:37565444-37565463	MS.gene49252:CDS	45.0%
	CAATGAGAGCCCTCTGAATT+TGG	-	chr6.4:37565446-37565465	None:intergenic	45.0%
	CAATTTGCAACGAGGAGATG+CGG	+	chr6.4:37565471-37565490	MS.gene49252:CDS	45.0%
	CCGTTTGCAACCATTCATGA+TGG	+	chr6.4:37566825-37566844	MS.gene49252:CDS	45.0%
	CTGTCTCAACTTTGCAGACT+CGG	+	chr6.4:37565715-37565734	MS.gene49252:CDS	45.0%
	GAGTTGCAATTAGTGGGGAT+GGG	-	chr6.4:37566777-37566796	None:intergenic	45.0%
	GCGACGGGAAATTGAATTTG+TGG	+	chr6.4:37566923-37566942	MS.gene49252:CDS	45.0%
	GGATAACAGTGATTCGCGAT+GGG	+	chr6.4:37566847-37566866	MS.gene49252:CDS	45.0%
	GGATGAACATGCAAGAGATG+TGG	+	chr6.4:37565942-37565961	MS.gene49252:CDS	45.0%
	TGGAAGAGAAAGAAGAGGGA+GGG	+	chr6.4:37565921-37565940	MS.gene49252:CDS	45.0%
	TGTGGAGACCAAGATGATGA+TGG	-	chr6.4:37566799-37566818	None:intergenic	45.0%
	TTCCTGACACCCCTATAAAC+CGG	-	chr6.4:37565557-37565576	None:intergenic	45.0%
!	TGTTGCTGCAATGGCATTGA+GGG	+	chr6.4:37565682-37565701	MS.gene49252:CDS	45.0%
!	TTTAAAACCCCGCTTGTACC+GGG	+	chr6.4:37566523-37566542	MS.gene49252:intron	45.0%
!!	TTTATAGGGGTGTCAGGAAG+AGG	+	chr6.4:37565558-37565577	MS.gene49252:CDS	45.0%
	AGTCATACTCTGCTCCTCAG+TGG	-	chr6.4:37565897-37565916	None:intergenic	50.0%
	ATGCCATTGCAGCAACATCG+TGG	-	chr6.4:37565679-37565698	None:intergenic	50.0%
	CGAGTCTGCAAAGTTGAGAC+AGG	-	chr6.4:37565717-37565736	None:intergenic	50.0%
	CTTCTCTGGTCTGAAAGCCT+CGG	-	chr6.4:37565807-37565826	None:intergenic	50.0%
	GGAGTTGCAATTAGTGGGGA+TGG	-	chr6.4:37566778-37566797	None:intergenic	50.0%
	GGGATAACAGTGATTCGCGA+TGG	+	chr6.4:37566846-37566865	MS.gene49252:CDS	50.0%
	TCAACTTTGCAGACTCGGCA+TGG	+	chr6.4:37565720-37565739	MS.gene49252:CDS	50.0%
	TCCTGACACCCCTATAAACC+GGG	-	chr6.4:37565556-37565575	None:intergenic	50.0%
	TGAACGGCTGAGATATGCCA+CGG	-	chr6.4:37566588-37566607	None:intergenic	50.0%
	TGAATGGTTGCAAACGGCGT+TGG	-	chr6.4:37566822-37566841	None:intergenic	50.0%
	TGCAGGGAGGAAGAAGTTCA+AGG	+	chr6.4:37565520-37565539	MS.gene49252:CDS	50.0%
	TGCCATTGCAGCAACATCGT+GGG	-	chr6.4:37565678-37565697	None:intergenic	50.0%
	TGTCCCCTACACATAGCTTG+GGG	+	chr6.4:37565981-37566000	MS.gene49252:CDS	50.0%
!	GTTGCTGCAATGGCATTGAG+GGG	+	chr6.4:37565683-37565702	MS.gene49252:CDS	50.0%
!	TTTTCTCCAGTTCTCTCCCG+TGG	+	chr6.4:37566568-37566587	MS.gene49252:intron	50.0%
!!!	TGGCTTGTCGTTTTGCCCTT+TGG	+	chr6.4:37566653-37566672	MS.gene49252:intron	50.0%
	AATCTGCTCCCGGTACAAGC+GGG	-	chr6.4:37566534-37566553	None:intergenic	55.0%
	ACACGCCACCCGGTTTATAG+GGG	+	chr6.4:37565545-37565564	MS.gene49252:CDS	55.0%
	ACCTGCCACTACTCAGGCAA+AGG	+	chr6.4:37565754-37565773	MS.gene49252:CDS	55.0%
	ACTTTGCAGACTCGGCATGG+CGG	+	chr6.4:37565723-37565742	MS.gene49252:CDS	55.0%
	AGACACGCCACCCGGTTTAT+AGG	+	chr6.4:37565543-37565562	MS.gene49252:CDS	55.0%
	CAACGAGGAGATGCGGTTAG+CGG	+	chr6.4:37565478-37565497	MS.gene49252:CDS	55.0%
	CACTTTCCCAACTGCCGAGA+TGG	+	chr6.4:37565643-37565662	MS.gene49252:CDS	55.0%
	CCTGAGTAGTGGCAGGTTTG+GGG	-	chr6.4:37565751-37565770	None:intergenic	55.0%
	GAACGGCTGAGATATGCCAC+GGG	-	chr6.4:37566587-37566606	None:intergenic	55.0%
	GAATCTGCTCCCGGTACAAG+CGG	-	chr6.4:37566535-37566554	None:intergenic	55.0%
	GACACGCCACCCGGTTTATA+GGG	+	chr6.4:37565544-37565563	MS.gene49252:CDS	55.0%
	GATATGCCACGGGAGAGAAC+TGG	-	chr6.4:37566577-37566596	None:intergenic	55.0%
	GCCTGAGTAGTGGCAGGTTT+GGG	-	chr6.4:37565752-37565771	None:intergenic	55.0%
	TCCTTTGCCTGAGTAGTGGC+AGG	-	chr6.4:37565758-37565777	None:intergenic	55.0%
	TGACACCCCTATAAACCGGG+TGG	-	chr6.4:37565553-37565572	None:intergenic	55.0%
	TGCCCACGATGTTGCTGCAA+TGG	+	chr6.4:37565673-37565692	MS.gene49252:CDS	55.0%
	TGCCTGAGTAGTGGCAGGTT+TGG	-	chr6.4:37565753-37565772	None:intergenic	55.0%
	TTCCTCCCTGCACGCTTCTT+CGG	-	chr6.4:37565512-37565531	None:intergenic	55.0%
	TTGCAGCAACATCGTGGGCA+CGG	-	chr6.4:37565673-37565692	None:intergenic	55.0%
!!	ACCCGGTTTATAGGGGTGTC+AGG	+	chr6.4:37565552-37565571	MS.gene49252:CDS	55.0%
	ACTCTGCTCCTCAGTGGCAG+TGG	-	chr6.4:37565891-37565910	None:intergenic	60.0%
	ATCTGCTCCCGGTACAAGCG+GGG	-	chr6.4:37566533-37566552	None:intergenic	60.0%
	CACGGGAGAGAATCTGCTCC+CGG	-	chr6.4:37566544-37566563	None:intergenic	60.0%
	CCCCAAACCTGCCACTACTC+AGG	+	chr6.4:37565748-37565767	MS.gene49252:CDS	60.0%
	CTCTGGTCTGAAAGCCTCGG+CGG	-	chr6.4:37565804-37565823	None:intergenic	60.0%
	GTTCAAGGAGACACGCCACC+CGG	+	chr6.4:37565535-37565554	MS.gene49252:CDS	60.0%
	TCCTCCCTGCACGCTTCTTC+GGG	-	chr6.4:37565511-37565530	None:intergenic	60.0%
	TGACACTGCCACTGCCACTG+AGG	+	chr6.4:37565880-37565899	MS.gene49252:CDS	60.0%
	TGCAGCAACATCGTGGGCAC+GGG	-	chr6.4:37565672-37565691	None:intergenic	60.0%
!	ACTACCCCGAAGAAGCGTGC+AGG	+	chr6.4:37565503-37565522	MS.gene49252:CDS	60.0%
!	CTACCCCGAAGAAGCGTGCA+GGG	+	chr6.4:37565504-37565523	MS.gene49252:CDS	60.0%
!!	GGTTGCAAACGGCGTTGGTG+TGG	-	chr6.4:37566817-37566836	None:intergenic	60.0%
	CCTCCCTGCACGCTTCTTCG+GGG	-	chr6.4:37565510-37565529	None:intergenic	65.0%
	GGGCTGCCATCTCGGCAGTT+GGG	-	chr6.4:37565652-37565671	None:intergenic	65.0%
	CGGGCTGCCATCTCGGCAGT+TGG	-	chr6.4:37565653-37565672	None:intergenic	70.0%
	GAAAGCCTCGGCGGCCTCTG+TGG	-	chr6.4:37565795-37565814	None:intergenic	70.0%
!	CCCCGAAGAAGCGTGCAGGG+AGG	+	chr6.4:37565507-37565526	MS.gene49252:CDS	70.0%
!	GTGGGCACGGGCTGCCATCT+CGG	-	chr6.4:37565660-37565679	None:intergenic	70.0%
	AGCAGCCACAGAGGCCGCCG+AGG	+	chr6.4:37565787-37565806	MS.gene49252:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.4	gene	37565434	37566971	37565434	ID=MS.gene49252
chr6.4	mRNA	37565434	37566971	37565434	ID=MS.gene49252.t1;Parent=MS.gene49252
chr6.4	exon	37565434	37566048	37565434	ID=MS.gene49252.t1.exon1;Parent=MS.gene49252.t1
chr6.4	CDS	37565434	37566048	37565434	ID=cds.MS.gene49252.t1;Parent=MS.gene49252.t1
chr6.4	exon	37566224	37566264	37566224	ID=MS.gene49252.t1.exon2;Parent=MS.gene49252.t1
chr6.4	CDS	37566224	37566264	37566224	ID=cds.MS.gene49252.t1;Parent=MS.gene49252.t1
chr6.4	exon	37566773	37566971	37566773	ID=MS.gene49252.t1.exon3;Parent=MS.gene49252.t1
chr6.4	CDS	37566773	37566971	37566773	ID=cds.MS.gene49252.t1;Parent=MS.gene49252.t1

Gene Sequence

>MS.gene49252

ATGTCGCTGCCAAATTCAGAGGGCTCTCATTGGATGTCAATTTGCAACGAGGAGATGCGGTTAGCGGCAACTACCCCGAAGAAGCGTGCAGGGAGGAAGAAGTTCAAGGAGACACGCCACCCGGTTTATAGGGGTGTCAGGAAGAGGAACTTAGATAAATGGGTTTGTGAAATGAGGGAGCCAAACAAGAAGACTAAGATCTGGCTAGGCACTTTCCCAACTGCCGAGATGGCAGCCCGTGCCCACGATGTTGCTGCAATGGCATTGAGGGGCCGTTACGCCTGTCTCAACTTTGCAGACTCGGCATGGCGGCTCCCCAAACCTGCCACTACTCAGGCAAAGGATATACAAAAAGCAGCCACAGAGGCCGCCGAGGCTTTCAGACCAGAGAAGACTTTAATAACTAATCACAATGACAATGATAAAGAGAATGACATGGCTGTAGTTGACACTGCCACTGCCACTGAGGAGCAGAGTATGACTTATATGGAAGAGAAAGAAGAGGGAGGGATGAACATGCAAGAGATGTGGAGTAATATGGCGCTAATGTCCCCTACACATAGCTTGGGGTATTATGAGTATGAATATATTCATGAAGACTTTCAAGATGAGGAGGTATCACTTTGGAGTTGTTAAATTTTTTGTAGGAAAATGGAATTTTTTTAGTTTGATCCATTTGGTTTACATTTATTTATTTTTGGATTGTAGTACAAACCTTTTTAATAGACGGATTCTTTATAGGTTGAAATTGGAAAAGAAATTCTTTTTGTATTCTTTTCTTTGAATGTAGTCACTAATGAAGCATAAAGTGCATCTCATTCCTTTTATGATGTAAGAAATAAGAAATATTTTGGTAAATATCTGTCTATTCAAGTATTTATGTATATTGGCATTTGGTTACAATTTCAAATTTAGACATAGAAAATATAGCCTATTGCTACCCATGTTTAGCTAATTAAATTACATTGAAGAGAGAAATCAGTGTCTCTCTTCTTATATACTATCACTACATAAAACGCGTATAGATTGCAACAATTTTTTGGTCATTTTTCGAGGTTTTTAACTCCCGCGTAATATTTTGCGAGAGTTTTTAAAACCCCGCTTGTACCGGGAGCAGATTCTCTCCCGTGTAATTTTTCTCCAGTTCTCTCCCGTGGCATATCTCAGCCGTTCATTTATTACAAGGAAAGATCAATGGATTGGAATTAAAACACATGAATGGCTTGTCGTTTTGCCCTTTGGTTTTTTCTCTCTTTTGTTTTTCTGTTCGTTTTGACTTATCTCCCGTTTTCACCTTTTTTTCCTCACAAAACCCACCTTAATCTTACTTGTTCAAAAGACCCATCCCCACTAATTGCAACTCCATCATCATCTTGGTCTCCACACCAACGCCGTTTGCAACCATTCATGATGGGATAACAGTGATTCGCGATGGGAAATCACCAACGCCATTTGCAACTGTGATTCACGATGGGATAACAATGATTTGGCGACGGGAAATTGAATTTGTGGTTGAAGTAGCGACAACCCCTTCCTAG

Protein sequence

>MS.gene49252.t1

MSLPNSEGSHWMSICNEEMRLAATTPKKRAGRKKFKETRHPVYRGVRKRNLDKWVCEMREPNKKTKIWLGTFPTAEMAARAHDVAAMALRGRYACLNFADSAWRLPKPATTQAKDIQKAATEAAEAFRPEKTLITNHNDNDKENDMAVVDTATATEEQSMTYMEEKEEGGMNMQEMWSNMALMSPTHSLGYYEYEYIHEDFQDEESLMKHKVHLIPFMIPIPTNCNSIIILVSTPTPFATIHDGITVIRDGKSPTPFATVIHDGITMIWRREIEFVVEVATTPS