Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79315.t1 | ABV22882.2 | 89.9 | 217 | 19 | 2 | 1 | 215 | 1 | 216 | 7.10E-101 | 376.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79315.t1 | Q9M0L0 | 56.2 | 192 | 72 | 4 | 32 | 215 | 29 | 216 | 1.0e-47 | 191.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79315.t1 | B5KKL4 | 89.9 | 217 | 19 | 2 | 1 | 215 | 1 | 216 | 5.1e-101 | 376.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene79315.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79315.t1 | MTR_6g465450 | 91.469 | 211 | 16 | 1 | 1 | 209 | 1 | 211 | 1.08e-136 | 383 |
MS.gene79315.t1 | MTR_6g465460 | 86.124 | 209 | 29 | 0 | 1 | 209 | 1 | 209 | 6.91e-126 | 357 |
MS.gene79315.t1 | MTR_6g465430 | 84.286 | 210 | 32 | 1 | 1 | 209 | 1 | 210 | 3.80e-124 | 351 |
MS.gene79315.t1 | MTR_6g465420 | 82.464 | 211 | 34 | 2 | 1 | 209 | 1 | 210 | 3.69e-123 | 349 |
MS.gene79315.t1 | MTR_6g465690 | 73.023 | 215 | 48 | 3 | 2 | 207 | 3 | 216 | 1.17e-103 | 300 |
MS.gene79315.t1 | MTR_6g466000 | 69.524 | 210 | 51 | 4 | 17 | 215 | 20 | 227 | 8.97e-100 | 289 |
MS.gene79315.t1 | MTR_6g465530 | 75.510 | 196 | 38 | 4 | 27 | 215 | 6 | 198 | 1.60e-97 | 282 |
MS.gene79315.t1 | MTR_6g465510 | 76.098 | 205 | 31 | 2 | 27 | 215 | 6 | 208 | 7.75e-97 | 281 |
MS.gene79315.t1 | MTR_6g466130 | 71.357 | 199 | 52 | 2 | 20 | 215 | 32 | 228 | 5.22e-92 | 269 |
MS.gene79315.t1 | MTR_1g101600 | 59.204 | 201 | 74 | 3 | 18 | 215 | 5 | 200 | 3.74e-71 | 215 |
MS.gene79315.t1 | MTR_6g465990 | 59.048 | 210 | 53 | 5 | 17 | 215 | 6 | 193 | 5.04e-71 | 214 |
MS.gene79315.t1 | MTR_6g465850 | 53.150 | 254 | 60 | 4 | 19 | 215 | 28 | 279 | 1.69e-68 | 211 |
MS.gene79315.t1 | MTR_6g466020 | 54.229 | 201 | 60 | 4 | 23 | 212 | 1 | 180 | 5.91e-61 | 189 |
MS.gene79315.t1 | MTR_5g010930 | 47.783 | 203 | 88 | 4 | 29 | 215 | 24 | 224 | 3.65e-55 | 176 |
MS.gene79315.t1 | MTR_4g102660 | 53.211 | 218 | 84 | 10 | 14 | 215 | 3 | 218 | 1.75e-53 | 171 |
MS.gene79315.t1 | MTR_5g010940 | 45.909 | 220 | 96 | 6 | 12 | 215 | 15 | 227 | 1.06e-51 | 167 |
MS.gene79315.t1 | MTR_5g010910 | 46.305 | 203 | 88 | 6 | 30 | 215 | 24 | 222 | 1.47e-48 | 159 |
MS.gene79315.t1 | MTR_8g006410 | 57.143 | 91 | 39 | 0 | 38 | 128 | 36 | 126 | 2.06e-32 | 116 |
MS.gene79315.t1 | MTR_3g110205 | 54.455 | 101 | 46 | 0 | 43 | 143 | 32 | 132 | 8.86e-32 | 114 |
MS.gene79315.t1 | MTR_7g117690 | 53.846 | 104 | 41 | 2 | 25 | 128 | 6 | 102 | 2.48e-31 | 112 |
MS.gene79315.t1 | MTR_7g046260 | 53.398 | 103 | 46 | 1 | 28 | 128 | 33 | 135 | 9.84e-31 | 113 |
MS.gene79315.t1 | MTR_2g085015 | 58.889 | 90 | 35 | 2 | 48 | 135 | 41 | 130 | 6.71e-30 | 110 |
MS.gene79315.t1 | MTR_5g012910 | 60.759 | 79 | 31 | 0 | 50 | 128 | 24 | 102 | 1.43e-29 | 108 |
MS.gene79315.t1 | MTR_8g027465 | 50.459 | 109 | 47 | 3 | 24 | 128 | 11 | 116 | 1.98e-28 | 105 |
MS.gene79315.t1 | MTR_8g013860 | 62.025 | 79 | 30 | 0 | 50 | 128 | 43 | 121 | 3.39e-28 | 105 |
MS.gene79315.t1 | MTR_8g102800 | 52.381 | 105 | 48 | 1 | 38 | 142 | 23 | 125 | 3.03e-27 | 104 |
MS.gene79315.t1 | MTR_2g101340 | 50.495 | 101 | 44 | 1 | 34 | 128 | 15 | 115 | 4.73e-27 | 102 |
MS.gene79315.t1 | MTR_6g088405 | 58.974 | 78 | 32 | 0 | 51 | 128 | 41 | 118 | 9.81e-27 | 102 |
MS.gene79315.t1 | MTR_4g100650 | 57.692 | 78 | 33 | 0 | 51 | 128 | 71 | 148 | 1.20e-24 | 97.8 |
MS.gene79315.t1 | MTR_4g102670 | 54.430 | 79 | 35 | 1 | 50 | 128 | 11 | 88 | 3.72e-24 | 94.4 |
MS.gene79315.t1 | MTR_4g035430 | 50.515 | 97 | 43 | 1 | 39 | 135 | 22 | 113 | 1.24e-23 | 94.4 |
MS.gene79315.t1 | MTR_5g008590 | 37.569 | 181 | 88 | 4 | 54 | 214 | 11 | 186 | 3.00e-23 | 92.4 |
MS.gene79315.t1 | MTR_6g088425 | 48.361 | 122 | 52 | 2 | 24 | 135 | 10 | 130 | 9.06e-23 | 92.4 |
MS.gene79315.t1 | MTR_1g006660 | 59.494 | 79 | 32 | 0 | 50 | 128 | 43 | 121 | 1.20e-20 | 87.4 |
MS.gene79315.t1 | MTR_1g014780 | 35.766 | 137 | 68 | 3 | 15 | 140 | 4 | 131 | 3.49e-19 | 82.8 |
MS.gene79315.t1 | MTR_5g008550 | 44.554 | 101 | 54 | 1 | 54 | 152 | 21 | 121 | 4.55e-19 | 81.6 |
MS.gene79315.t1 | MTR_5g008470 | 37.143 | 105 | 66 | 0 | 56 | 160 | 77 | 181 | 1.62e-17 | 77.4 |
MS.gene79315.t1 | MTR_3g105510 | 45.882 | 85 | 46 | 0 | 54 | 138 | 37 | 121 | 3.54e-17 | 77.8 |
MS.gene79315.t1 | MTR_2g435590 | 53.030 | 66 | 31 | 0 | 47 | 112 | 89 | 154 | 6.55e-17 | 77.0 |
MS.gene79315.t1 | MTR_3g102100 | 36.220 | 127 | 75 | 3 | 54 | 177 | 45 | 168 | 7.29e-17 | 75.5 |
MS.gene79315.t1 | MTR_1g087920 | 40.000 | 120 | 70 | 1 | 6 | 123 | 27 | 146 | 7.41e-17 | 77.8 |
MS.gene79315.t1 | MTR_1g014820 | 42.391 | 92 | 49 | 1 | 53 | 140 | 26 | 117 | 8.11e-17 | 77.0 |
MS.gene79315.t1 | MTR_1g014860 | 41.053 | 95 | 49 | 1 | 53 | 140 | 21 | 115 | 1.26e-16 | 75.9 |
MS.gene79315.t1 | MTR_3g074130 | 51.351 | 74 | 34 | 1 | 38 | 111 | 136 | 207 | 1.32e-16 | 77.4 |
MS.gene79315.t1 | MTR_2g105380 | 41.837 | 98 | 54 | 1 | 12 | 109 | 78 | 172 | 1.53e-16 | 77.4 |
MS.gene79315.t1 | MTR_5g083340 | 60.345 | 58 | 23 | 0 | 54 | 111 | 85 | 142 | 1.79e-16 | 77.4 |
MS.gene79315.t1 | MTR_8g090350 | 38.843 | 121 | 67 | 3 | 53 | 167 | 112 | 231 | 3.81e-16 | 75.5 |
MS.gene79315.t1 | MTR_2g043050 | 45.882 | 85 | 46 | 0 | 53 | 137 | 18 | 102 | 4.06e-16 | 74.3 |
MS.gene79315.t1 | MTR_1g090170 | 55.738 | 61 | 27 | 0 | 49 | 109 | 147 | 207 | 4.26e-16 | 75.9 |
MS.gene79315.t1 | MTR_1g060910 | 35.260 | 173 | 64 | 8 | 38 | 187 | 3 | 150 | 5.86e-16 | 72.8 |
MS.gene79315.t1 | MTR_5g062700 | 57.627 | 59 | 25 | 0 | 53 | 111 | 172 | 230 | 6.01e-16 | 75.9 |
MS.gene79315.t1 | MTR_1g090170 | 53.968 | 63 | 29 | 0 | 49 | 111 | 234 | 296 | 6.53e-16 | 75.9 |
MS.gene79315.t1 | MTR_7g021010 | 50.000 | 70 | 34 | 1 | 45 | 113 | 2 | 71 | 8.18e-16 | 71.6 |
MS.gene79315.t1 | MTR_1g014800 | 53.333 | 60 | 28 | 0 | 53 | 112 | 30 | 89 | 8.70e-16 | 73.6 |
MS.gene79315.t1 | MTR_3g105480 | 45.783 | 83 | 45 | 0 | 56 | 138 | 33 | 115 | 1.24e-15 | 73.2 |
MS.gene79315.t1 | MTR_2g090235 | 57.627 | 59 | 25 | 0 | 53 | 111 | 217 | 275 | 1.37e-15 | 75.1 |
MS.gene79315.t1 | MTR_8g022820 | 44.304 | 79 | 41 | 1 | 47 | 125 | 116 | 191 | 1.37e-15 | 74.7 |
MS.gene79315.t1 | MTR_8g022820 | 44.304 | 79 | 41 | 1 | 47 | 125 | 117 | 192 | 1.37e-15 | 74.7 |
MS.gene79315.t1 | MTR_8g022820 | 44.304 | 79 | 41 | 1 | 47 | 125 | 117 | 192 | 1.37e-15 | 74.7 |
MS.gene79315.t1 | MTR_7g020980 | 50.000 | 64 | 32 | 0 | 50 | 113 | 47 | 110 | 1.76e-15 | 71.6 |
MS.gene79315.t1 | MTR_1g101550 | 40.426 | 141 | 72 | 3 | 54 | 183 | 57 | 196 | 1.78e-15 | 72.8 |
MS.gene79315.t1 | MTR_2g043030 | 41.758 | 91 | 53 | 0 | 53 | 143 | 18 | 108 | 2.10e-15 | 72.0 |
MS.gene79315.t1 | MTR_3g053690 | 56.923 | 65 | 25 | 1 | 45 | 109 | 21 | 82 | 2.77e-15 | 72.0 |
MS.gene79315.t1 | MTR_7g021010 | 42.697 | 89 | 50 | 1 | 45 | 132 | 41 | 129 | 3.45e-15 | 70.9 |
MS.gene79315.t1 | MTR_1g028560 | 56.140 | 57 | 25 | 0 | 54 | 110 | 115 | 171 | 3.77e-15 | 73.2 |
MS.gene79315.t1 | MTR_2g078680 | 50.000 | 76 | 35 | 1 | 34 | 109 | 14 | 86 | 4.82e-15 | 71.2 |
MS.gene79315.t1 | MTR_7g028925 | 55.000 | 60 | 24 | 1 | 53 | 112 | 28 | 84 | 5.47e-15 | 68.2 |
MS.gene79315.t1 | MTR_4g114570 | 51.429 | 70 | 27 | 1 | 54 | 123 | 7 | 69 | 5.56e-15 | 71.2 |
MS.gene79315.t1 | MTR_8g092460 | 53.333 | 60 | 28 | 0 | 54 | 113 | 145 | 204 | 5.90e-15 | 72.4 |
MS.gene79315.t1 | MTR_4g086220 | 58.929 | 56 | 23 | 0 | 54 | 109 | 96 | 151 | 6.60e-15 | 71.2 |
MS.gene79315.t1 | MTR_1g019110 | 50.000 | 62 | 31 | 0 | 54 | 115 | 44 | 105 | 6.73e-15 | 70.1 |
MS.gene79315.t1 | MTR_5g083330 | 49.315 | 73 | 37 | 0 | 39 | 111 | 20 | 92 | 9.72e-15 | 71.6 |
MS.gene79315.t1 | MTR_4g010640 | 57.143 | 56 | 24 | 0 | 54 | 109 | 7 | 62 | 1.18e-14 | 70.1 |
MS.gene79315.t1 | MTR_2g089170 | 58.929 | 56 | 23 | 0 | 54 | 109 | 65 | 120 | 1.95e-14 | 69.3 |
MS.gene79315.t1 | MTR_4g008860 | 60.714 | 56 | 22 | 0 | 54 | 109 | 8 | 63 | 2.24e-14 | 69.3 |
MS.gene79315.t1 | MTR_3g106290 | 60.714 | 56 | 22 | 0 | 54 | 109 | 8 | 63 | 2.30e-14 | 68.9 |
MS.gene79315.t1 | MTR_2g103700 | 53.333 | 60 | 28 | 0 | 54 | 113 | 7 | 66 | 2.39e-14 | 68.6 |
MS.gene79315.t1 | MTR_4g086160 | 57.143 | 56 | 24 | 0 | 54 | 109 | 96 | 151 | 2.44e-14 | 69.7 |
MS.gene79315.t1 | MTR_4g086190 | 57.143 | 56 | 24 | 0 | 54 | 109 | 96 | 151 | 2.59e-14 | 69.7 |
MS.gene79315.t1 | MTR_4g078710 | 36.893 | 103 | 59 | 1 | 54 | 156 | 28 | 124 | 3.00e-14 | 69.3 |
MS.gene79315.t1 | MTR_5g082950 | 58.929 | 56 | 23 | 0 | 54 | 109 | 66 | 121 | 3.45e-14 | 70.5 |
MS.gene79315.t1 | MTR_4g086165 | 57.143 | 56 | 24 | 0 | 54 | 109 | 82 | 137 | 3.63e-14 | 68.9 |
MS.gene79315.t1 | MTR_5g016750 | 53.571 | 56 | 26 | 0 | 54 | 109 | 25 | 80 | 4.85e-14 | 68.2 |
MS.gene79315.t1 | MTR_0939s0010 | 57.143 | 56 | 24 | 0 | 54 | 109 | 65 | 120 | 6.19e-14 | 68.2 |
MS.gene79315.t1 | MTR_1g048610 | 39.604 | 101 | 58 | 2 | 10 | 109 | 47 | 145 | 6.92e-14 | 68.6 |
MS.gene79315.t1 | MTR_7g092190 | 57.143 | 56 | 24 | 0 | 54 | 109 | 30 | 85 | 8.45e-14 | 68.9 |
MS.gene79315.t1 | MTR_5g009620 | 50.667 | 75 | 27 | 2 | 41 | 109 | 97 | 167 | 9.02e-14 | 69.3 |
MS.gene79315.t1 | MTR_1g074310 | 51.613 | 62 | 29 | 1 | 54 | 114 | 21 | 82 | 1.01e-13 | 66.2 |
MS.gene79315.t1 | MTR_2g014340 | 55.357 | 56 | 25 | 0 | 54 | 109 | 19 | 74 | 1.34e-13 | 67.0 |
MS.gene79315.t1 | MTR_8g099215 | 46.250 | 80 | 37 | 1 | 36 | 109 | 83 | 162 | 1.72e-13 | 68.6 |
MS.gene79315.t1 | MTR_2g438180 | 53.226 | 62 | 28 | 1 | 54 | 114 | 14 | 75 | 2.34e-13 | 65.1 |
MS.gene79315.t1 | MTR_3g090760 | 39.623 | 106 | 54 | 2 | 30 | 134 | 98 | 194 | 2.37e-13 | 68.2 |
MS.gene79315.t1 | MTR_7g085810 | 29.487 | 156 | 92 | 3 | 54 | 192 | 30 | 184 | 4.02e-13 | 66.6 |
MS.gene79315.t1 | MTR_2g015050 | 54.386 | 57 | 25 | 1 | 54 | 109 | 134 | 190 | 4.12e-13 | 67.0 |
MS.gene79315.t1 | MTR_2g014300 | 57.143 | 56 | 24 | 0 | 54 | 109 | 15 | 70 | 5.53e-13 | 65.1 |
MS.gene79315.t1 | MTR_2g043040 | 41.176 | 85 | 50 | 0 | 53 | 137 | 18 | 102 | 6.27e-13 | 65.9 |
MS.gene79315.t1 | MTR_2g043020 | 39.560 | 91 | 55 | 0 | 53 | 143 | 18 | 108 | 6.35e-13 | 65.5 |
MS.gene79315.t1 | MTR_5g085100 | 40.187 | 107 | 46 | 3 | 13 | 119 | 16 | 104 | 6.81e-13 | 66.2 |
MS.gene79315.t1 | MTR_1g070070 | 54.386 | 57 | 25 | 1 | 54 | 109 | 21 | 77 | 7.79e-13 | 63.9 |
MS.gene79315.t1 | MTR_4g100450 | 35.833 | 120 | 67 | 2 | 4 | 113 | 95 | 214 | 8.69e-13 | 66.2 |
MS.gene79315.t1 | MTR_8g069360 | 53.571 | 56 | 26 | 0 | 54 | 109 | 44 | 99 | 1.01e-12 | 66.6 |
MS.gene79315.t1 | MTR_2g016730 | 42.683 | 82 | 42 | 1 | 51 | 132 | 20 | 96 | 1.55e-12 | 65.9 |
MS.gene79315.t1 | MTR_1g074230 | 56.140 | 57 | 24 | 1 | 54 | 109 | 19 | 75 | 1.85e-12 | 62.8 |
MS.gene79315.t1 | MTR_4g100420 | 50.746 | 67 | 30 | 2 | 48 | 113 | 153 | 217 | 2.99e-12 | 64.7 |
MS.gene79315.t1 | MTR_4g054360 | 48.529 | 68 | 34 | 1 | 47 | 113 | 117 | 184 | 3.50e-12 | 64.3 |
MS.gene79315.t1 | MTR_5g032820 | 55.357 | 56 | 25 | 0 | 54 | 109 | 46 | 101 | 3.51e-12 | 65.1 |
MS.gene79315.t1 | MTR_4g111915 | 47.458 | 59 | 31 | 0 | 54 | 112 | 53 | 111 | 4.44e-12 | 61.6 |
MS.gene79315.t1 | MTR_3g072610 | 41.441 | 111 | 54 | 2 | 39 | 138 | 3 | 113 | 5.89e-12 | 63.2 |
MS.gene79315.t1 | MTR_5g085070 | 49.315 | 73 | 27 | 2 | 47 | 119 | 47 | 109 | 7.09e-12 | 63.5 |
MS.gene79315.t1 | MTR_5g075570 | 48.333 | 60 | 31 | 0 | 50 | 109 | 120 | 179 | 9.16e-12 | 63.2 |
MS.gene79315.t1 | MTR_4g054740 | 47.059 | 68 | 35 | 1 | 47 | 113 | 90 | 157 | 1.04e-11 | 62.8 |
MS.gene79315.t1 | MTR_5g008790 | 39.080 | 87 | 48 | 2 | 54 | 135 | 18 | 104 | 1.16e-11 | 61.2 |
MS.gene79315.t1 | MTR_6g041970 | 39.535 | 86 | 39 | 1 | 54 | 139 | 18 | 90 | 1.21e-11 | 59.7 |
MS.gene79315.t1 | MTR_8g085960 | 36.957 | 92 | 54 | 3 | 38 | 127 | 10 | 99 | 1.22e-11 | 62.4 |
MS.gene79315.t1 | MTR_4g088005 | 48.438 | 64 | 32 | 1 | 47 | 109 | 50 | 113 | 1.32e-11 | 60.1 |
MS.gene79315.t1 | MTR_8g032610 | 50.000 | 60 | 30 | 0 | 54 | 113 | 27 | 86 | 1.43e-11 | 62.8 |
MS.gene79315.t1 | MTR_4g112490 | 47.458 | 59 | 31 | 0 | 54 | 112 | 53 | 111 | 1.62e-11 | 61.6 |
MS.gene79315.t1 | MTR_4g119270 | 44.444 | 72 | 37 | 1 | 38 | 109 | 40 | 108 | 1.83e-11 | 62.8 |
MS.gene79315.t1 | MTR_7g084370 | 53.571 | 56 | 26 | 0 | 54 | 109 | 42 | 97 | 1.93e-11 | 62.4 |
MS.gene79315.t1 | MTR_5g008540 | 45.902 | 61 | 33 | 0 | 56 | 116 | 26 | 86 | 1.97e-11 | 58.9 |
MS.gene79315.t1 | MTR_1g090290 | 50.000 | 62 | 28 | 2 | 49 | 109 | 110 | 169 | 2.10e-11 | 61.2 |
MS.gene79315.t1 | MTR_2g019750 | 43.662 | 71 | 38 | 1 | 39 | 109 | 37 | 105 | 2.99e-11 | 62.0 |
MS.gene79315.t1 | MTR_6g029180 | 41.573 | 89 | 50 | 2 | 39 | 127 | 19 | 105 | 3.20e-11 | 62.0 |
MS.gene79315.t1 | MTR_1g074250 | 49.180 | 61 | 29 | 1 | 51 | 109 | 16 | 76 | 3.80e-11 | 58.9 |
MS.gene79315.t1 | MTR_4g054860 | 44.928 | 69 | 37 | 1 | 46 | 113 | 123 | 191 | 6.41e-11 | 60.8 |
MS.gene79315.t1 | MTR_6g012970 | 51.786 | 56 | 27 | 0 | 54 | 109 | 38 | 93 | 6.43e-11 | 61.2 |
MS.gene79315.t1 | MTR_8g006840 | 50.877 | 57 | 27 | 1 | 54 | 109 | 125 | 181 | 6.55e-11 | 59.7 |
MS.gene79315.t1 | MTR_1g097190 | 43.662 | 71 | 34 | 1 | 32 | 102 | 7 | 71 | 7.63e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79315.t1 | AT4G25470 | 54.592 | 196 | 71 | 4 | 31 | 215 | 28 | 216 | 2.10e-62 | 194 |
MS.gene79315.t1 | AT5G51990 | 51.759 | 199 | 75 | 5 | 31 | 215 | 31 | 222 | 1.65e-59 | 186 |
MS.gene79315.t1 | AT4G25480 | 56.250 | 192 | 72 | 4 | 32 | 215 | 29 | 216 | 2.22e-59 | 186 |
MS.gene79315.t1 | AT4G25490 | 50.704 | 213 | 91 | 5 | 12 | 215 | 6 | 213 | 1.27e-55 | 176 |
MS.gene79315.t1 | AT1G63030 | 48.168 | 191 | 85 | 5 | 27 | 215 | 3 | 181 | 1.73e-55 | 175 |
MS.gene79315.t1 | AT1G63030 | 48.168 | 191 | 85 | 5 | 27 | 215 | 3 | 181 | 1.73e-55 | 175 |
MS.gene79315.t1 | AT1G12610 | 68.421 | 114 | 36 | 0 | 27 | 140 | 3 | 116 | 4.79e-55 | 174 |
MS.gene79315.t1 | AT5G25810 | 48.780 | 123 | 56 | 1 | 13 | 135 | 2 | 117 | 2.59e-32 | 117 |
MS.gene79315.t1 | AT2G44940 | 59.140 | 93 | 38 | 0 | 43 | 135 | 89 | 181 | 2.19e-30 | 114 |
MS.gene79315.t1 | AT5G11590 | 54.455 | 101 | 43 | 1 | 35 | 135 | 35 | 132 | 6.58e-30 | 111 |
MS.gene79315.t1 | AT2G35700 | 47.015 | 134 | 70 | 1 | 49 | 182 | 40 | 172 | 2.61e-29 | 108 |
MS.gene79315.t1 | AT4G32800 | 54.082 | 98 | 39 | 1 | 50 | 141 | 15 | 112 | 4.97e-29 | 108 |
MS.gene79315.t1 | AT1G01250 | 60.000 | 80 | 32 | 0 | 49 | 128 | 40 | 119 | 2.31e-28 | 105 |
MS.gene79315.t1 | AT2G36450 | 41.477 | 176 | 90 | 5 | 50 | 215 | 11 | 183 | 6.95e-28 | 104 |
MS.gene79315.t1 | AT4G16750 | 56.790 | 81 | 35 | 0 | 49 | 129 | 35 | 115 | 3.76e-27 | 102 |
MS.gene79315.t1 | AT3G16280 | 39.459 | 185 | 86 | 5 | 50 | 215 | 57 | 234 | 3.88e-27 | 103 |
MS.gene79315.t1 | AT3G16280 | 39.459 | 185 | 86 | 5 | 50 | 215 | 75 | 252 | 6.34e-27 | 103 |
MS.gene79315.t1 | AT3G60490 | 52.747 | 91 | 42 | 1 | 39 | 128 | 55 | 145 | 2.65e-25 | 99.8 |
MS.gene79315.t1 | AT2G25820 | 59.211 | 76 | 31 | 0 | 53 | 128 | 25 | 100 | 1.81e-24 | 96.7 |
MS.gene79315.t1 | AT1G71450 | 57.317 | 82 | 35 | 0 | 53 | 134 | 23 | 104 | 1.65e-23 | 93.2 |
MS.gene79315.t1 | AT5G52020 | 39.011 | 182 | 84 | 7 | 50 | 215 | 61 | 231 | 2.69e-20 | 85.9 |
MS.gene79315.t1 | AT1G33760 | 52.809 | 89 | 42 | 0 | 54 | 142 | 20 | 108 | 5.74e-19 | 81.3 |
MS.gene79315.t1 | AT4G13620 | 51.282 | 78 | 37 | 1 | 35 | 111 | 212 | 289 | 5.93e-19 | 84.3 |
MS.gene79315.t1 | AT2G47520 | 51.515 | 66 | 32 | 0 | 47 | 112 | 43 | 108 | 1.72e-18 | 79.7 |
MS.gene79315.t1 | AT5G21960 | 29.717 | 212 | 101 | 5 | 52 | 215 | 5 | 216 | 3.32e-18 | 80.1 |
MS.gene79315.t1 | AT1G77200 | 57.143 | 77 | 33 | 0 | 52 | 128 | 41 | 117 | 6.34e-18 | 79.7 |
MS.gene79315.t1 | AT1G21910 | 46.739 | 92 | 42 | 1 | 54 | 138 | 50 | 141 | 6.79e-18 | 79.3 |
MS.gene79315.t1 | AT1G22190 | 53.425 | 73 | 32 | 1 | 39 | 111 | 70 | 140 | 7.26e-18 | 79.7 |
MS.gene79315.t1 | AT4G39780 | 57.377 | 61 | 26 | 0 | 49 | 109 | 88 | 148 | 1.82e-17 | 79.0 |
MS.gene79315.t1 | AT2G22200 | 45.455 | 88 | 44 | 1 | 53 | 136 | 70 | 157 | 2.42e-17 | 78.6 |
MS.gene79315.t1 | AT1G19210 | 31.111 | 180 | 100 | 4 | 54 | 215 | 12 | 185 | 4.04e-17 | 76.3 |
MS.gene79315.t1 | AT1G46768 | 55.556 | 63 | 27 | 1 | 49 | 111 | 27 | 88 | 5.23e-17 | 75.1 |
MS.gene79315.t1 | AT1G46768 | 55.556 | 63 | 27 | 1 | 49 | 111 | 27 | 88 | 5.23e-17 | 75.1 |
MS.gene79315.t1 | AT1G74930 | 44.186 | 86 | 48 | 0 | 54 | 139 | 21 | 106 | 5.30e-17 | 76.3 |
MS.gene79315.t1 | AT1G46768 | 55.556 | 63 | 27 | 1 | 49 | 111 | 27 | 88 | 5.48e-17 | 74.7 |
MS.gene79315.t1 | AT3G11020 | 58.730 | 63 | 26 | 0 | 51 | 113 | 75 | 137 | 6.87e-17 | 78.2 |
MS.gene79315.t1 | AT3G16770 | 51.282 | 78 | 31 | 1 | 34 | 111 | 66 | 136 | 7.05e-17 | 77.0 |
MS.gene79315.t1 | AT1G12630 | 60.274 | 73 | 28 | 1 | 50 | 122 | 15 | 86 | 1.65e-16 | 74.7 |
MS.gene79315.t1 | AT4G06746 | 51.613 | 62 | 30 | 0 | 54 | 115 | 36 | 97 | 1.99e-16 | 73.6 |
MS.gene79315.t1 | AT1G78080 | 57.627 | 59 | 25 | 0 | 53 | 111 | 151 | 209 | 4.18e-16 | 75.9 |
MS.gene79315.t1 | AT2G33710 | 48.101 | 79 | 36 | 1 | 49 | 122 | 65 | 143 | 6.73e-16 | 73.9 |
MS.gene79315.t1 | AT2G33710 | 48.101 | 79 | 36 | 1 | 49 | 122 | 65 | 143 | 9.17e-16 | 73.6 |
MS.gene79315.t1 | AT4G28140 | 54.237 | 59 | 27 | 0 | 53 | 111 | 142 | 200 | 1.05e-15 | 74.3 |
MS.gene79315.t1 | AT5G67190 | 36.364 | 121 | 67 | 3 | 54 | 174 | 21 | 131 | 1.13e-15 | 72.4 |
MS.gene79315.t1 | AT2G20880 | 46.341 | 82 | 42 | 1 | 30 | 111 | 165 | 244 | 1.33e-15 | 74.7 |
MS.gene79315.t1 | AT5G65130 | 55.738 | 61 | 27 | 0 | 53 | 113 | 110 | 170 | 1.49e-15 | 73.9 |
MS.gene79315.t1 | AT5G65130 | 55.738 | 61 | 27 | 0 | 53 | 113 | 112 | 172 | 1.55e-15 | 73.9 |
MS.gene79315.t1 | AT3G50260 | 37.273 | 110 | 57 | 2 | 47 | 156 | 14 | 111 | 2.17e-15 | 70.9 |
MS.gene79315.t1 | AT1G71520 | 41.667 | 96 | 47 | 2 | 48 | 137 | 8 | 100 | 2.32e-15 | 70.5 |
MS.gene79315.t1 | AT4G36900 | 53.333 | 60 | 28 | 0 | 50 | 109 | 26 | 85 | 2.41e-15 | 72.0 |
MS.gene79315.t1 | AT1G36060 | 59.649 | 57 | 23 | 0 | 53 | 109 | 142 | 198 | 2.44e-15 | 73.6 |
MS.gene79315.t1 | AT5G05410 | 57.627 | 59 | 25 | 0 | 54 | 112 | 79 | 137 | 3.76e-15 | 73.2 |
MS.gene79315.t1 | AT1G15360 | 58.929 | 56 | 23 | 0 | 54 | 109 | 7 | 62 | 4.81e-15 | 71.2 |
MS.gene79315.t1 | AT1G15360 | 58.929 | 56 | 23 | 0 | 54 | 109 | 7 | 62 | 4.81e-15 | 71.2 |
MS.gene79315.t1 | AT2G23340 | 55.357 | 56 | 25 | 0 | 54 | 109 | 28 | 83 | 4.93e-15 | 70.5 |
MS.gene79315.t1 | AT5G05410 | 57.627 | 59 | 25 | 0 | 54 | 112 | 79 | 137 | 4.97e-15 | 72.8 |
MS.gene79315.t1 | AT5G47230 | 32.544 | 169 | 102 | 5 | 30 | 193 | 133 | 294 | 7.94e-15 | 72.0 |
MS.gene79315.t1 | AT3G15210 | 57.143 | 63 | 24 | 1 | 47 | 109 | 21 | 80 | 9.44e-15 | 70.9 |
MS.gene79315.t1 | AT5G44210 | 50.725 | 69 | 27 | 1 | 54 | 122 | 33 | 94 | 1.14e-14 | 70.1 |
MS.gene79315.t1 | AT3G61630 | 46.835 | 79 | 36 | 1 | 54 | 132 | 105 | 177 | 1.26e-14 | 71.6 |
MS.gene79315.t1 | AT1G22810 | 39.785 | 93 | 41 | 2 | 54 | 138 | 14 | 99 | 1.40e-14 | 68.6 |
MS.gene79315.t1 | AT5G61890 | 40.952 | 105 | 53 | 3 | 9 | 113 | 54 | 149 | 1.46e-14 | 70.9 |
MS.gene79315.t1 | AT5G13330 | 51.562 | 64 | 29 | 1 | 50 | 113 | 37 | 98 | 1.81e-14 | 69.7 |
MS.gene79315.t1 | AT4G31060 | 53.571 | 56 | 26 | 0 | 54 | 109 | 27 | 82 | 2.47e-14 | 68.9 |
MS.gene79315.t1 | AT4G27950 | 56.140 | 57 | 25 | 0 | 54 | 110 | 118 | 174 | 3.28e-14 | 70.5 |
MS.gene79315.t1 | AT5G25390 | 55.357 | 56 | 25 | 0 | 54 | 109 | 7 | 62 | 3.67e-14 | 68.6 |
MS.gene79315.t1 | AT3G57600 | 55.357 | 56 | 25 | 0 | 54 | 109 | 28 | 83 | 6.44e-14 | 69.3 |
MS.gene79315.t1 | AT1G75490 | 48.571 | 70 | 36 | 0 | 53 | 122 | 41 | 110 | 7.22e-14 | 68.2 |
MS.gene79315.t1 | AT5G07580 | 48.101 | 79 | 38 | 2 | 48 | 125 | 106 | 182 | 9.08e-14 | 67.8 |
MS.gene79315.t1 | AT5G25190 | 58.929 | 56 | 23 | 0 | 54 | 109 | 8 | 63 | 1.16e-13 | 67.0 |
MS.gene79315.t1 | AT5G61600 | 57.377 | 61 | 23 | 2 | 50 | 109 | 86 | 144 | 1.21e-13 | 68.2 |
MS.gene79315.t1 | AT5G53290 | 42.045 | 88 | 50 | 1 | 23 | 110 | 95 | 181 | 1.24e-13 | 68.9 |
MS.gene79315.t1 | AT1G12890 | 46.154 | 78 | 39 | 1 | 32 | 109 | 2 | 76 | 1.43e-13 | 67.4 |
MS.gene79315.t1 | AT4G11140 | 45.205 | 73 | 34 | 1 | 54 | 126 | 87 | 153 | 1.50e-13 | 68.6 |
MS.gene79315.t1 | AT5G43410 | 47.887 | 71 | 34 | 2 | 40 | 109 | 3 | 71 | 2.09e-13 | 65.1 |
MS.gene79315.t1 | AT1G72360 | 46.032 | 63 | 34 | 0 | 47 | 109 | 18 | 80 | 2.27e-13 | 66.6 |
MS.gene79315.t1 | AT5G51190 | 53.968 | 63 | 26 | 2 | 48 | 109 | 68 | 128 | 3.15e-13 | 66.6 |
MS.gene79315.t1 | AT1G72360 | 42.105 | 76 | 44 | 0 | 34 | 109 | 54 | 129 | 3.49e-13 | 67.0 |
MS.gene79315.t1 | AT1G03800 | 48.529 | 68 | 32 | 1 | 42 | 109 | 44 | 108 | 3.57e-13 | 66.6 |
MS.gene79315.t1 | AT4G17490 | 39.252 | 107 | 58 | 4 | 12 | 113 | 93 | 197 | 3.74e-13 | 67.0 |
MS.gene79315.t1 | AT1G72360 | 46.032 | 63 | 34 | 0 | 47 | 109 | 69 | 131 | 5.19e-13 | 66.6 |
MS.gene79315.t1 | AT3G23230 | 50.000 | 62 | 30 | 1 | 54 | 114 | 20 | 81 | 5.48e-13 | 64.3 |
MS.gene79315.t1 | AT2G46310 | 51.786 | 56 | 27 | 0 | 54 | 109 | 99 | 154 | 1.09e-12 | 65.9 |
MS.gene79315.t1 | AT3G20310 | 51.613 | 62 | 30 | 0 | 48 | 109 | 21 | 82 | 1.36e-12 | 65.1 |
MS.gene79315.t1 | AT1G28360 | 53.333 | 60 | 28 | 0 | 54 | 113 | 12 | 71 | 1.41e-12 | 64.3 |
MS.gene79315.t1 | AT1G28370 | 53.571 | 56 | 26 | 0 | 54 | 109 | 20 | 75 | 1.42e-12 | 63.9 |
MS.gene79315.t1 | AT5G64750 | 36.957 | 92 | 52 | 2 | 64 | 155 | 195 | 280 | 1.49e-12 | 66.2 |
MS.gene79315.t1 | AT1G28370 | 53.571 | 56 | 26 | 0 | 54 | 109 | 58 | 113 | 1.86e-12 | 64.3 |
MS.gene79315.t1 | AT5G19790 | 53.448 | 58 | 27 | 0 | 54 | 111 | 22 | 79 | 2.32e-12 | 64.7 |
MS.gene79315.t1 | AT5G18450 | 54.386 | 57 | 26 | 0 | 53 | 109 | 33 | 89 | 2.87e-12 | 65.1 |
MS.gene79315.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 54 | 109 | 14 | 69 | 3.47e-12 | 64.3 |
MS.gene79315.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 54 | 109 | 14 | 69 | 3.47e-12 | 64.3 |
MS.gene79315.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 54 | 109 | 14 | 69 | 3.47e-12 | 64.3 |
MS.gene79315.t1 | AT1G50640 | 53.968 | 63 | 26 | 1 | 47 | 109 | 24 | 83 | 5.17e-12 | 63.2 |
MS.gene79315.t1 | AT4G23750 | 50.877 | 57 | 28 | 0 | 54 | 110 | 122 | 178 | 5.25e-12 | 64.3 |
MS.gene79315.t1 | AT4G23750 | 50.877 | 57 | 28 | 0 | 54 | 110 | 122 | 178 | 5.25e-12 | 64.3 |
MS.gene79315.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 54 | 109 | 72 | 127 | 6.15e-12 | 63.9 |
MS.gene79315.t1 | AT1G24590 | 51.562 | 64 | 28 | 1 | 54 | 117 | 58 | 118 | 6.77e-12 | 63.9 |
MS.gene79315.t1 | AT1G12980 | 55.357 | 56 | 25 | 0 | 54 | 109 | 57 | 112 | 7.06e-12 | 63.9 |
MS.gene79315.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 54 | 109 | 72 | 127 | 7.29e-12 | 63.9 |
MS.gene79315.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 54 | 109 | 79 | 134 | 7.62e-12 | 63.9 |
MS.gene79315.t1 | AT5G47220 | 52.632 | 57 | 26 | 1 | 54 | 109 | 117 | 173 | 1.70e-11 | 62.0 |
MS.gene79315.t1 | AT5G13910 | 44.595 | 74 | 37 | 1 | 54 | 127 | 20 | 89 | 1.79e-11 | 61.6 |
MS.gene79315.t1 | AT5G18560 | 45.070 | 71 | 38 | 1 | 39 | 109 | 41 | 110 | 2.31e-11 | 62.4 |
MS.gene79315.t1 | AT5G25390 | 51.786 | 56 | 24 | 1 | 54 | 109 | 7 | 59 | 2.71e-11 | 60.8 |
MS.gene79315.t1 | AT1G28160 | 52.542 | 59 | 28 | 0 | 54 | 112 | 39 | 97 | 2.78e-11 | 61.6 |
MS.gene79315.t1 | AT1G77640 | 46.667 | 90 | 42 | 2 | 54 | 137 | 43 | 132 | 4.25e-11 | 60.8 |
MS.gene79315.t1 | AT5G67000 | 44.286 | 70 | 36 | 1 | 39 | 108 | 109 | 175 | 4.71e-11 | 60.1 |
Find 56 sgRNAs with CRISPR-Local
Find 63 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGACATGTCAACTCCGAATT+TGG | 0.204088 | 6.3:+56317959 | MS.gene79315:CDS |
TTCCTCCCTGCTCGCTTCTT+TGG | 0.225255 | 6.3:-56318005 | None:intergenic |
GGAAGAGAAACTTAGATAAA+TGG | 0.269349 | 6.3:+56318069 | MS.gene79315:CDS |
GCCAGAGTTGTGGAGGAATA+TGG | 0.338237 | 6.3:+56318421 | MS.gene79315:CDS |
AGAAGATGCTGTTGAGGAAA+TGG | 0.382238 | 6.3:-56317931 | None:intergenic |
GAAGAGAAACTTAGATAAAT+GGG | 0.414389 | 6.3:+56318070 | MS.gene79315:CDS |
ATCTTGGAGGTTGCTGGAAT+AGG | 0.418159 | 6.3:-56318245 | None:intergenic |
TGGCTGCAACATCGTGAGCT+CGG | 0.427202 | 6.3:-56318166 | None:intergenic |
AAACATATTCAACTCCTTTG+TGG | 0.437441 | 6.3:-56318366 | None:intergenic |
TGAGGAAATGGATTGTGAAT+TGG | 0.438162 | 6.3:-56317919 | None:intergenic |
ATGTCTCCTACACATAGCTT+TGG | 0.440249 | 6.3:+56318449 | MS.gene79315:CDS |
GGCTGCAACATCGTGAGCTC+GGG | 0.441379 | 6.3:-56318165 | None:intergenic |
TTAGTCATTAAAGTCTTGTC+TGG | 0.447019 | 6.3:-56318314 | None:intergenic |
GCTAATCGTACCTCCAAATT+CGG | 0.451077 | 6.3:-56317972 | None:intergenic |
GTGAGCTCGGGCTGCCATCT+CGG | 0.455278 | 6.3:-56318153 | None:intergenic |
CAAATCCTAGTCTTCGTGTT+GGG | 0.456107 | 6.3:-56318110 | None:intergenic |
TGTTGCAGCCATGGCATTGA+GGG | 0.456149 | 6.3:+56318178 | MS.gene79315:CDS |
TGTCTCCTACACATAGCTTT+GGG | 0.457669 | 6.3:+56318450 | MS.gene79315:CDS |
AGCTCACGATGTTGCAGCCA+TGG | 0.468549 | 6.3:+56318169 | MS.gene79315:CDS |
CCAACACGAAGACTAGGATT+TGG | 0.470711 | 6.3:+56318111 | MS.gene79315:CDS |
CGGGCTGCCATCTCGGCGGT+TGG | 0.487435 | 6.3:-56318146 | None:intergenic |
ACTCGCCACCCGGTGTATAG+AGG | 0.498536 | 6.3:+56318041 | MS.gene79315:CDS |
AGTAATCCAAAGAAGCGAGC+AGG | 0.504680 | 6.3:+56317999 | MS.gene79315:CDS |
GCCATATTCCTCCACAACTC+TGG | 0.506491 | 6.3:-56318422 | None:intergenic |
AAGATGATGAGGTATCACTA+TGG | 0.509514 | 6.3:+56318513 | MS.gene79315:CDS |
ATGTTGCAGCCATGGCATTG+AGG | 0.532194 | 6.3:+56318177 | MS.gene79315:CDS |
CAAGATAAAAGATATTCAAA+AGG | 0.534968 | 6.3:+56318262 | MS.gene79315:CDS |
TAAATGGGTGTGTGAAATGA+GGG | 0.541686 | 6.3:+56318085 | MS.gene79315:CDS |
GAATTTGGAGGTACGATTAG+CGG | 0.551670 | 6.3:+56317974 | MS.gene79315:CDS |
GGGAGCCCAACACGAAGACT+AGG | 0.562532 | 6.3:+56318105 | MS.gene79315:CDS |
ACGAAGACTAGGATTTGGCT+AGG | 0.572328 | 6.3:+56318116 | MS.gene79315:CDS |
GTAGCGGCCCCTCAATGCCA+TGG | 0.573319 | 6.3:-56318186 | None:intergenic |
TTCCTCACACCTCTATACAC+CGG | 0.578151 | 6.3:-56318050 | None:intergenic |
CCAAATCCTAGTCTTCGTGT+TGG | 0.579118 | 6.3:-56318111 | None:intergenic |
GTAATCCAAAGAAGCGAGCA+GGG | 0.580411 | 6.3:+56318000 | MS.gene79315:CDS |
TCCTCACACCTCTATACACC+GGG | 0.580421 | 6.3:-56318049 | None:intergenic |
AGCAGGGAGGAAGATATTCA+AGG | 0.582130 | 6.3:+56318016 | MS.gene79315:CDS |
ATAAATGGGTGTGTGAAATG+AGG | 0.586819 | 6.3:+56318084 | MS.gene79315:CDS |
CATGTCAACTCCGAATTTGG+AGG | 0.602972 | 6.3:+56317962 | MS.gene79315:CDS |
ATTCAAGGAAACTCGCCACC+CGG | 0.604485 | 6.3:+56318031 | MS.gene79315:CDS |
TCATACCCAAAGCTATGTGT+AGG | 0.605774 | 6.3:-56318455 | None:intergenic |
TGGAGGTTGCTGGAATAGGA+AGG | 0.610301 | 6.3:-56318241 | None:intergenic |
GTTGCAGCCATGGCATTGAG+GGG | 0.611621 | 6.3:+56318179 | MS.gene79315:CDS |
TGTTGAATATGCCAGAGTTG+TGG | 0.615027 | 6.3:+56318411 | MS.gene79315:CDS |
ACAAGACTTTCAAGATGATG+AGG | 0.645752 | 6.3:+56318502 | MS.gene79315:CDS |
TGTAGCTGTTGTCGCCACAA+AGG | 0.648906 | 6.3:+56318352 | MS.gene79315:CDS |
CGAAGACTAGGATTTGGCTA+GGG | 0.652853 | 6.3:+56318117 | MS.gene79315:CDS |
GTACGAAGAAGATGCTGTTG+AGG | 0.656629 | 6.3:-56317937 | None:intergenic |
AATGACTAACGATATTGACA+CGG | 0.658662 | 6.3:+56318328 | MS.gene79315:CDS |
CGAGTCTGCAAAATTGACAC+AGG | 0.659220 | 6.3:-56318210 | None:intergenic |
CAAAATTGACACAGGCGTAG+CGG | 0.661280 | 6.3:-56318202 | None:intergenic |
AGCTCGGGCTGCCATCTCGG+CGG | 0.662264 | 6.3:-56318150 | None:intergenic |
TGAATATGCCAGAGTTGTGG+AGG | 0.686416 | 6.3:+56318414 | MS.gene79315:CDS |
ACCCGGTGTATAGAGGTGTG+AGG | 0.705873 | 6.3:+56318048 | MS.gene79315:CDS |
TCACACCTCTATACACCGGG+TGG | 0.726886 | 6.3:-56318046 | None:intergenic |
ATCCAAAGAAGCGAGCAGGG+AGG | 0.749882 | 6.3:+56318003 | MS.gene79315:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAAGATAAAAGATATTCAAA+AGG | + | chr6.3:56318262-56318281 | MS.gene79315:CDS | 20.0% |
!!! | CTTTTGAATATCTTTTATCT+TGG | - | chr6.3:56318264-56318283 | None:intergenic | 20.0% |
! | GAAGAGAAACTTAGATAAAT+GGG | + | chr6.3:56318070-56318089 | MS.gene79315:CDS | 25.0% |
!! | TTGAATATCTTTTATCTTGG+AGG | - | chr6.3:56318261-56318280 | None:intergenic | 25.0% |
AAACATATTCAACTCCTTTG+TGG | - | chr6.3:56318369-56318388 | None:intergenic | 30.0% | |
AATGACTAACGATATTGACA+CGG | + | chr6.3:56318328-56318347 | MS.gene79315:CDS | 30.0% | |
GGAAGAGAAACTTAGATAAA+TGG | + | chr6.3:56318069-56318088 | MS.gene79315:CDS | 30.0% | |
! | TTAGTCATTAAAGTCTTGTC+TGG | - | chr6.3:56318317-56318336 | None:intergenic | 30.0% |
ACAAGACTTTCAAGATGATG+AGG | + | chr6.3:56318502-56318521 | MS.gene79315:CDS | 35.0% | |
ATAAATGGGTGTGTGAAATG+AGG | + | chr6.3:56318084-56318103 | MS.gene79315:CDS | 35.0% | |
TAAATGGGTGTGTGAAATGA+GGG | + | chr6.3:56318085-56318104 | MS.gene79315:CDS | 35.0% | |
! | AAGATGATGAGGTATCACTA+TGG | + | chr6.3:56318513-56318532 | MS.gene79315:CDS | 35.0% |
! | GGAGTTGAATATGTTTTGTG+TGG | + | chr6.3:56318373-56318392 | MS.gene79315:CDS | 35.0% |
!! | TGAGGAAATGGATTGTGAAT+TGG | - | chr6.3:56317922-56317941 | None:intergenic | 35.0% |
AGAAGATGCTGTTGAGGAAA+TGG | - | chr6.3:56317934-56317953 | None:intergenic | 40.0% | |
ATGTCTCCTACACATAGCTT+TGG | + | chr6.3:56318449-56318468 | MS.gene79315:CDS | 40.0% | |
GCTAATCGTACCTCCAAATT+CGG | - | chr6.3:56317975-56317994 | None:intergenic | 40.0% | |
TCATACCCAAAGCTATGTGT+AGG | - | chr6.3:56318458-56318477 | None:intergenic | 40.0% | |
TGTCTCCTACACATAGCTTT+GGG | + | chr6.3:56318450-56318469 | MS.gene79315:CDS | 40.0% | |
TGTTGAATATGCCAGAGTTG+TGG | + | chr6.3:56318411-56318430 | MS.gene79315:CDS | 40.0% | |
! | CAAATCCTAGTCTTCGTGTT+GGG | - | chr6.3:56318113-56318132 | None:intergenic | 40.0% |
! | CTGTGTCAATTTTGCAGACT+CGG | + | chr6.3:56318211-56318230 | MS.gene79315:CDS | 40.0% |
! | GAATTTGGAGGTACGATTAG+CGG | + | chr6.3:56317974-56317993 | MS.gene79315:CDS | 40.0% |
! | TCTTTTATCTTGGAGGTTGC+TGG | - | chr6.3:56318254-56318273 | None:intergenic | 40.0% |
ACGAAGACTAGGATTTGGCT+AGG | + | chr6.3:56318116-56318135 | MS.gene79315:CDS | 45.0% | |
AGCAGGGAGGAAGATATTCA+AGG | + | chr6.3:56318016-56318035 | MS.gene79315:CDS | 45.0% | |
AGTAATCCAAAGAAGCGAGC+AGG | + | chr6.3:56317999-56318018 | MS.gene79315:CDS | 45.0% | |
ATCTTGGAGGTTGCTGGAAT+AGG | - | chr6.3:56318248-56318267 | None:intergenic | 45.0% | |
CAAAATTGACACAGGCGTAG+CGG | - | chr6.3:56318205-56318224 | None:intergenic | 45.0% | |
CATGTCAACTCCGAATTTGG+AGG | + | chr6.3:56317962-56317981 | MS.gene79315:CDS | 45.0% | |
CCAACACGAAGACTAGGATT+TGG | + | chr6.3:56318111-56318130 | MS.gene79315:CDS | 45.0% | |
CGAAGACTAGGATTTGGCTA+GGG | + | chr6.3:56318117-56318136 | MS.gene79315:CDS | 45.0% | |
CGACATGTCAACTCCGAATT+TGG | + | chr6.3:56317959-56317978 | MS.gene79315:CDS | 45.0% | |
CGAGTCTGCAAAATTGACAC+AGG | - | chr6.3:56318213-56318232 | None:intergenic | 45.0% | |
GTAATCCAAAGAAGCGAGCA+GGG | + | chr6.3:56318000-56318019 | MS.gene79315:CDS | 45.0% | |
GTACGAAGAAGATGCTGTTG+AGG | - | chr6.3:56317940-56317959 | None:intergenic | 45.0% | |
TGAATATGCCAGAGTTGTGG+AGG | + | chr6.3:56318414-56318433 | MS.gene79315:CDS | 45.0% | |
TTCCTCACACCTCTATACAC+CGG | - | chr6.3:56318053-56318072 | None:intergenic | 45.0% | |
! | CCAAATCCTAGTCTTCGTGT+TGG | - | chr6.3:56318114-56318133 | None:intergenic | 45.0% |
!!! | TCAATTTTGCAGACTCGGTG+TGG | + | chr6.3:56318216-56318235 | MS.gene79315:CDS | 45.0% |
ATGTTGCAGCCATGGCATTG+AGG | + | chr6.3:56318177-56318196 | MS.gene79315:CDS | 50.0% | |
ATTCAAGGAAACTCGCCACC+CGG | + | chr6.3:56318031-56318050 | MS.gene79315:CDS | 50.0% | |
GCCAGAGTTGTGGAGGAATA+TGG | + | chr6.3:56318421-56318440 | MS.gene79315:CDS | 50.0% | |
GCCATATTCCTCCACAACTC+TGG | - | chr6.3:56318425-56318444 | None:intergenic | 50.0% | |
TCCTCACACCTCTATACACC+GGG | - | chr6.3:56318052-56318071 | None:intergenic | 50.0% | |
TGGAGGTTGCTGGAATAGGA+AGG | - | chr6.3:56318244-56318263 | None:intergenic | 50.0% | |
TGTAGCTGTTGTCGCCACAA+AGG | + | chr6.3:56318352-56318371 | MS.gene79315:CDS | 50.0% | |
! | TGTTGCAGCCATGGCATTGA+GGG | + | chr6.3:56318178-56318197 | MS.gene79315:CDS | 50.0% |
AGCTCACGATGTTGCAGCCA+TGG | + | chr6.3:56318169-56318188 | MS.gene79315:CDS | 55.0% | |
ATCCAAAGAAGCGAGCAGGG+AGG | + | chr6.3:56318003-56318022 | MS.gene79315:CDS | 55.0% | |
TCACACCTCTATACACCGGG+TGG | - | chr6.3:56318049-56318068 | None:intergenic | 55.0% | |
TGGCTGCAACATCGTGAGCT+CGG | - | chr6.3:56318169-56318188 | None:intergenic | 55.0% | |
TTCCTCCCTGCTCGCTTCTT+TGG | - | chr6.3:56318008-56318027 | None:intergenic | 55.0% | |
! | ACCCGGTGTATAGAGGTGTG+AGG | + | chr6.3:56318048-56318067 | MS.gene79315:CDS | 55.0% |
! | GACTTTTCCAACCGCCGAGA+TGG | + | chr6.3:56318139-56318158 | MS.gene79315:CDS | 55.0% |
! | GTTGCAGCCATGGCATTGAG+GGG | + | chr6.3:56318179-56318198 | MS.gene79315:CDS | 55.0% |
ACTCGCCACCCGGTGTATAG+AGG | + | chr6.3:56318041-56318060 | MS.gene79315:CDS | 60.0% | |
GGCTGCAACATCGTGAGCTC+GGG | - | chr6.3:56318168-56318187 | None:intergenic | 60.0% | |
GGGAGCCCAACACGAAGACT+AGG | + | chr6.3:56318105-56318124 | MS.gene79315:CDS | 60.0% | |
GTAGCGGCCCCTCAATGCCA+TGG | - | chr6.3:56318189-56318208 | None:intergenic | 65.0% | |
GTGAGCTCGGGCTGCCATCT+CGG | - | chr6.3:56318156-56318175 | None:intergenic | 65.0% | |
AGCTCGGGCTGCCATCTCGG+CGG | - | chr6.3:56318153-56318172 | None:intergenic | 70.0% | |
CGGGCTGCCATCTCGGCGGT+TGG | - | chr6.3:56318149-56318168 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 56317897 | 56318544 | 56317897 | ID=MS.gene79315 |
chr6.3 | mRNA | 56317897 | 56318544 | 56317897 | ID=MS.gene79315.t1;Parent=MS.gene79315 |
chr6.3 | exon | 56317897 | 56318544 | 56317897 | ID=MS.gene79315.t1.exon1;Parent=MS.gene79315.t1 |
chr6.3 | CDS | 56317897 | 56318544 | 56317897 | ID=cds.MS.gene79315.t1;Parent=MS.gene79315.t1 |
Gene Sequence |
Protein sequence |