Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49250.t1 | GAU50255.1 | 74.6 | 209 | 51 | 1 | 1 | 209 | 17 | 223 | 1.70E-75 | 292.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49250.t1 | Q9M0L0 | 53.9 | 191 | 81 | 2 | 21 | 207 | 29 | 216 | 1.6e-45 | 184.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49250.t1 | A0A392MU56 | 72.2 | 209 | 54 | 1 | 1 | 209 | 19 | 223 | 4.3e-76 | 293.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene49250.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49250.t1 | MTR_6g466130 | 77.619 | 210 | 43 | 2 | 1 | 209 | 24 | 230 | 4.32e-104 | 300 |
MS.gene49250.t1 | MTR_6g466000 | 69.444 | 216 | 50 | 3 | 3 | 207 | 17 | 227 | 7.58e-100 | 289 |
MS.gene49250.t1 | MTR_6g465690 | 71.782 | 202 | 50 | 3 | 2 | 201 | 22 | 218 | 1.81e-95 | 279 |
MS.gene49250.t1 | MTR_6g466020 | 70.732 | 205 | 34 | 3 | 1 | 204 | 1 | 180 | 1.89e-91 | 266 |
MS.gene49250.t1 | MTR_6g465420 | 70.430 | 186 | 49 | 3 | 18 | 201 | 29 | 210 | 1.07e-90 | 267 |
MS.gene49250.t1 | MTR_6g465450 | 70.918 | 196 | 50 | 3 | 9 | 201 | 20 | 211 | 6.25e-90 | 264 |
MS.gene49250.t1 | MTR_6g465460 | 69.022 | 184 | 51 | 1 | 18 | 201 | 29 | 206 | 5.52e-89 | 263 |
MS.gene49250.t1 | MTR_6g465530 | 72.487 | 189 | 51 | 1 | 20 | 207 | 10 | 198 | 2.96e-87 | 256 |
MS.gene49250.t1 | MTR_6g465430 | 71.123 | 187 | 46 | 3 | 18 | 201 | 29 | 210 | 2.48e-86 | 255 |
MS.gene49250.t1 | MTR_6g465510 | 72.362 | 199 | 44 | 2 | 20 | 207 | 10 | 208 | 3.54e-84 | 248 |
MS.gene49250.t1 | MTR_6g465850 | 59.216 | 255 | 46 | 4 | 10 | 209 | 30 | 281 | 1.45e-80 | 242 |
MS.gene49250.t1 | MTR_6g465990 | 60.550 | 218 | 50 | 4 | 1 | 207 | 1 | 193 | 1.38e-73 | 221 |
MS.gene49250.t1 | MTR_1g101600 | 57.711 | 201 | 80 | 1 | 9 | 209 | 7 | 202 | 4.14e-73 | 220 |
MS.gene49250.t1 | MTR_5g010940 | 46.341 | 205 | 99 | 3 | 15 | 209 | 26 | 229 | 7.29e-52 | 167 |
MS.gene49250.t1 | MTR_5g010930 | 48.039 | 204 | 93 | 5 | 18 | 209 | 24 | 226 | 2.62e-51 | 165 |
MS.gene49250.t1 | MTR_5g010910 | 45.960 | 198 | 96 | 3 | 22 | 209 | 28 | 224 | 6.39e-50 | 162 |
MS.gene49250.t1 | MTR_4g102660 | 49.763 | 211 | 84 | 6 | 15 | 209 | 16 | 220 | 7.62e-50 | 161 |
MS.gene49250.t1 | MTR_3g110205 | 64.368 | 87 | 31 | 0 | 38 | 124 | 38 | 124 | 5.71e-35 | 122 |
MS.gene49250.t1 | MTR_2g085015 | 41.451 | 193 | 83 | 9 | 37 | 206 | 41 | 226 | 4.05e-32 | 116 |
MS.gene49250.t1 | MTR_8g006410 | 66.667 | 78 | 26 | 0 | 40 | 117 | 49 | 126 | 5.29e-32 | 115 |
MS.gene49250.t1 | MTR_2g101340 | 54.098 | 122 | 50 | 2 | 23 | 138 | 15 | 136 | 1.87e-31 | 114 |
MS.gene49250.t1 | MTR_5g012910 | 63.291 | 79 | 29 | 0 | 39 | 117 | 24 | 102 | 3.10e-31 | 112 |
MS.gene49250.t1 | MTR_8g102800 | 58.586 | 99 | 41 | 0 | 33 | 131 | 27 | 125 | 1.77e-30 | 112 |
MS.gene49250.t1 | MTR_7g046260 | 62.963 | 81 | 30 | 0 | 37 | 117 | 55 | 135 | 5.25e-30 | 111 |
MS.gene49250.t1 | MTR_7g117690 | 55.682 | 88 | 39 | 0 | 30 | 117 | 15 | 102 | 1.11e-29 | 108 |
MS.gene49250.t1 | MTR_8g027465 | 50.000 | 116 | 54 | 3 | 6 | 117 | 1 | 116 | 2.06e-29 | 108 |
MS.gene49250.t1 | MTR_4g102670 | 62.025 | 79 | 29 | 1 | 39 | 117 | 11 | 88 | 1.04e-28 | 105 |
MS.gene49250.t1 | MTR_8g013860 | 60.759 | 79 | 31 | 0 | 39 | 117 | 43 | 121 | 7.29e-28 | 104 |
MS.gene49250.t1 | MTR_4g100650 | 62.821 | 78 | 29 | 0 | 40 | 117 | 71 | 148 | 1.48e-27 | 105 |
MS.gene49250.t1 | MTR_6g088405 | 60.256 | 78 | 31 | 0 | 40 | 117 | 41 | 118 | 2.36e-27 | 103 |
MS.gene49250.t1 | MTR_6g088425 | 48.361 | 122 | 53 | 1 | 13 | 124 | 9 | 130 | 5.53e-24 | 95.5 |
MS.gene49250.t1 | MTR_1g006660 | 51.429 | 105 | 50 | 1 | 13 | 117 | 18 | 121 | 1.09e-23 | 95.1 |
MS.gene49250.t1 | MTR_4g035430 | 46.392 | 97 | 47 | 1 | 28 | 124 | 22 | 113 | 1.61e-21 | 88.6 |
MS.gene49250.t1 | MTR_5g008590 | 55.435 | 92 | 41 | 0 | 43 | 134 | 11 | 102 | 1.11e-20 | 85.5 |
MS.gene49250.t1 | MTR_1g014780 | 41.379 | 116 | 60 | 2 | 42 | 150 | 37 | 151 | 2.19e-20 | 85.9 |
MS.gene49250.t1 | MTR_1g014820 | 36.364 | 132 | 74 | 3 | 42 | 165 | 26 | 155 | 1.04e-18 | 82.0 |
MS.gene49250.t1 | MTR_3g102100 | 58.929 | 56 | 23 | 0 | 43 | 98 | 45 | 100 | 2.30e-18 | 79.0 |
MS.gene49250.t1 | MTR_1g014860 | 37.190 | 121 | 67 | 2 | 38 | 151 | 17 | 135 | 3.51e-18 | 79.7 |
MS.gene49250.t1 | MTR_5g008550 | 41.121 | 107 | 61 | 1 | 43 | 147 | 21 | 127 | 7.22e-18 | 78.2 |
MS.gene49250.t1 | MTR_5g008470 | 45.238 | 84 | 46 | 0 | 45 | 128 | 77 | 160 | 1.45e-17 | 77.4 |
MS.gene49250.t1 | MTR_1g019110 | 58.929 | 56 | 23 | 0 | 43 | 98 | 44 | 99 | 1.45e-17 | 77.0 |
MS.gene49250.t1 | MTR_5g016750 | 57.143 | 56 | 24 | 0 | 43 | 98 | 25 | 80 | 3.07e-17 | 76.3 |
MS.gene49250.t1 | MTR_1g060910 | 31.795 | 195 | 91 | 8 | 27 | 205 | 3 | 171 | 5.02e-17 | 75.5 |
MS.gene49250.t1 | MTR_7g020980 | 55.000 | 60 | 27 | 0 | 39 | 98 | 47 | 106 | 1.72e-16 | 74.3 |
MS.gene49250.t1 | MTR_2g435590 | 49.333 | 75 | 35 | 1 | 27 | 101 | 83 | 154 | 2.17e-16 | 75.5 |
MS.gene49250.t1 | MTR_7g021010 | 54.688 | 64 | 28 | 1 | 36 | 98 | 4 | 67 | 2.74e-16 | 72.8 |
MS.gene49250.t1 | MTR_5g083340 | 58.621 | 58 | 24 | 0 | 43 | 100 | 85 | 142 | 4.14e-16 | 76.3 |
MS.gene49250.t1 | MTR_7g021010 | 53.333 | 60 | 28 | 0 | 39 | 98 | 47 | 106 | 5.77e-16 | 72.8 |
MS.gene49250.t1 | MTR_8g092460 | 37.736 | 106 | 63 | 1 | 43 | 145 | 145 | 250 | 5.95e-16 | 75.1 |
MS.gene49250.t1 | MTR_1g101550 | 36.158 | 177 | 102 | 6 | 43 | 209 | 57 | 232 | 7.64e-16 | 73.6 |
MS.gene49250.t1 | MTR_4g086220 | 58.929 | 56 | 23 | 0 | 43 | 98 | 96 | 151 | 1.21e-15 | 73.2 |
MS.gene49250.t1 | MTR_2g043050 | 42.353 | 85 | 49 | 0 | 42 | 126 | 18 | 102 | 1.36e-15 | 72.8 |
MS.gene49250.t1 | MTR_1g014800 | 35.652 | 115 | 64 | 2 | 42 | 149 | 30 | 141 | 2.13e-15 | 72.4 |
MS.gene49250.t1 | MTR_2g078680 | 44.944 | 89 | 42 | 2 | 14 | 98 | 1 | 86 | 3.79e-15 | 71.2 |
MS.gene49250.t1 | MTR_4g086190 | 57.143 | 56 | 24 | 0 | 43 | 98 | 96 | 151 | 3.82e-15 | 71.6 |
MS.gene49250.t1 | MTR_4g086160 | 57.143 | 56 | 24 | 0 | 43 | 98 | 96 | 151 | 3.86e-15 | 71.6 |
MS.gene49250.t1 | MTR_4g086165 | 57.143 | 56 | 24 | 0 | 43 | 98 | 82 | 137 | 4.31e-15 | 71.2 |
MS.gene49250.t1 | MTR_1g028560 | 56.140 | 57 | 25 | 0 | 43 | 99 | 115 | 171 | 5.48e-15 | 72.8 |
MS.gene49250.t1 | MTR_2g105380 | 47.222 | 72 | 38 | 0 | 31 | 102 | 105 | 176 | 5.48e-15 | 72.8 |
MS.gene49250.t1 | MTR_3g105510 | 41.379 | 87 | 47 | 1 | 43 | 125 | 37 | 123 | 7.16e-15 | 71.2 |
MS.gene49250.t1 | MTR_2g043030 | 40.000 | 90 | 54 | 0 | 42 | 131 | 18 | 107 | 7.43e-15 | 70.5 |
MS.gene49250.t1 | MTR_8g090350 | 46.053 | 76 | 38 | 1 | 42 | 114 | 112 | 187 | 7.74e-15 | 71.6 |
MS.gene49250.t1 | MTR_3g074130 | 48.718 | 78 | 37 | 2 | 24 | 100 | 132 | 207 | 7.79e-15 | 72.4 |
MS.gene49250.t1 | MTR_1g087920 | 40.816 | 98 | 56 | 1 | 5 | 100 | 37 | 134 | 9.25e-15 | 71.6 |
MS.gene49250.t1 | MTR_5g083330 | 49.315 | 73 | 37 | 0 | 28 | 100 | 20 | 92 | 1.00e-14 | 71.6 |
MS.gene49250.t1 | MTR_1g090170 | 52.459 | 61 | 29 | 0 | 38 | 98 | 147 | 207 | 1.01e-14 | 71.6 |
MS.gene49250.t1 | MTR_3g072610 | 48.315 | 89 | 42 | 2 | 43 | 127 | 25 | 113 | 1.54e-14 | 70.1 |
MS.gene49250.t1 | MTR_5g062700 | 54.237 | 59 | 27 | 0 | 42 | 100 | 172 | 230 | 1.64e-14 | 71.6 |
MS.gene49250.t1 | MTR_1g090170 | 50.794 | 63 | 31 | 0 | 38 | 100 | 234 | 296 | 1.66e-14 | 71.6 |
MS.gene49250.t1 | MTR_2g089170 | 57.143 | 56 | 24 | 0 | 43 | 98 | 65 | 120 | 2.31e-14 | 68.9 |
MS.gene49250.t1 | MTR_4g100450 | 40.625 | 96 | 54 | 2 | 4 | 98 | 117 | 210 | 2.73e-14 | 70.5 |
MS.gene49250.t1 | MTR_2g015050 | 50.725 | 69 | 33 | 1 | 31 | 98 | 122 | 190 | 3.43e-14 | 69.7 |
MS.gene49250.t1 | MTR_2g090235 | 54.237 | 59 | 27 | 0 | 42 | 100 | 217 | 275 | 3.87e-14 | 70.5 |
MS.gene49250.t1 | MTR_8g022820 | 47.143 | 70 | 37 | 0 | 33 | 102 | 113 | 182 | 4.72e-14 | 70.1 |
MS.gene49250.t1 | MTR_0939s0010 | 55.357 | 56 | 25 | 0 | 43 | 98 | 65 | 120 | 4.80e-14 | 68.2 |
MS.gene49250.t1 | MTR_8g022820 | 47.143 | 70 | 37 | 0 | 33 | 102 | 114 | 183 | 4.97e-14 | 70.1 |
MS.gene49250.t1 | MTR_8g022820 | 47.143 | 70 | 37 | 0 | 33 | 102 | 114 | 183 | 4.97e-14 | 70.1 |
MS.gene49250.t1 | MTR_5g082950 | 57.143 | 56 | 24 | 0 | 43 | 98 | 66 | 121 | 6.62e-14 | 69.7 |
MS.gene49250.t1 | MTR_2g043040 | 41.176 | 85 | 50 | 0 | 42 | 126 | 18 | 102 | 8.70e-14 | 68.2 |
MS.gene49250.t1 | MTR_2g014300 | 55.357 | 56 | 25 | 0 | 43 | 98 | 15 | 70 | 1.17e-13 | 66.6 |
MS.gene49250.t1 | MTR_4g078710 | 53.571 | 56 | 26 | 0 | 43 | 98 | 28 | 83 | 1.53e-13 | 67.0 |
MS.gene49250.t1 | MTR_3g105480 | 41.176 | 85 | 46 | 1 | 45 | 125 | 33 | 117 | 1.82e-13 | 67.0 |
MS.gene49250.t1 | MTR_7g092190 | 55.357 | 56 | 25 | 0 | 43 | 98 | 30 | 85 | 1.91e-13 | 67.8 |
MS.gene49250.t1 | MTR_2g014340 | 47.887 | 71 | 34 | 1 | 28 | 98 | 7 | 74 | 1.95e-13 | 66.6 |
MS.gene49250.t1 | MTR_3g090760 | 38.776 | 98 | 51 | 1 | 16 | 113 | 95 | 183 | 2.03e-13 | 68.2 |
MS.gene49250.t1 | MTR_3g053690 | 53.125 | 64 | 27 | 1 | 35 | 98 | 22 | 82 | 2.47e-13 | 66.6 |
MS.gene49250.t1 | MTR_4g100420 | 39.583 | 96 | 55 | 2 | 4 | 98 | 120 | 213 | 2.90e-13 | 67.4 |
MS.gene49250.t1 | MTR_1g074310 | 54.386 | 57 | 25 | 1 | 43 | 98 | 21 | 77 | 3.37e-13 | 64.7 |
MS.gene49250.t1 | MTR_2g438180 | 54.237 | 59 | 26 | 1 | 43 | 100 | 14 | 72 | 3.48e-13 | 64.3 |
MS.gene49250.t1 | MTR_1g074230 | 54.386 | 57 | 25 | 1 | 43 | 98 | 19 | 75 | 3.81e-13 | 64.3 |
MS.gene49250.t1 | MTR_1g070070 | 52.632 | 57 | 26 | 1 | 43 | 98 | 21 | 77 | 5.27e-13 | 64.3 |
MS.gene49250.t1 | MTR_3g106290 | 57.143 | 56 | 24 | 0 | 43 | 98 | 8 | 63 | 5.38e-13 | 65.1 |
MS.gene49250.t1 | MTR_5g085100 | 44.186 | 86 | 38 | 2 | 23 | 108 | 29 | 104 | 7.22e-13 | 66.2 |
MS.gene49250.t1 | MTR_5g009620 | 39.560 | 91 | 49 | 1 | 14 | 98 | 77 | 167 | 9.77e-13 | 66.2 |
MS.gene49250.t1 | MTR_7g028925 | 50.000 | 60 | 27 | 1 | 42 | 101 | 28 | 84 | 1.11e-12 | 62.0 |
MS.gene49250.t1 | MTR_1g048610 | 52.632 | 57 | 26 | 1 | 43 | 98 | 89 | 145 | 1.67e-12 | 64.7 |
MS.gene49250.t1 | MTR_2g043020 | 34.783 | 115 | 70 | 2 | 42 | 156 | 18 | 127 | 2.28e-12 | 63.5 |
MS.gene49250.t1 | MTR_4g008860 | 57.143 | 56 | 24 | 0 | 43 | 98 | 8 | 63 | 2.55e-12 | 63.5 |
MS.gene49250.t1 | MTR_5g085070 | 50.794 | 63 | 28 | 1 | 36 | 98 | 47 | 106 | 3.80e-12 | 64.3 |
MS.gene49250.t1 | MTR_1g074250 | 50.820 | 61 | 28 | 1 | 40 | 98 | 16 | 76 | 3.98e-12 | 61.6 |
MS.gene49250.t1 | MTR_5g008790 | 40.230 | 87 | 47 | 2 | 43 | 124 | 18 | 104 | 4.54e-12 | 62.0 |
MS.gene49250.t1 | MTR_4g114570 | 51.786 | 56 | 27 | 0 | 43 | 98 | 7 | 62 | 4.73e-12 | 63.2 |
MS.gene49250.t1 | MTR_4g010640 | 51.786 | 56 | 27 | 0 | 43 | 98 | 7 | 62 | 6.12e-12 | 62.8 |
MS.gene49250.t1 | MTR_8g099215 | 37.895 | 95 | 53 | 1 | 10 | 98 | 68 | 162 | 7.47e-12 | 63.5 |
MS.gene49250.t1 | MTR_1g090290 | 39.175 | 97 | 55 | 3 | 3 | 98 | 76 | 169 | 7.53e-12 | 62.4 |
MS.gene49250.t1 | MTR_4g088005 | 44.928 | 69 | 37 | 1 | 31 | 98 | 45 | 113 | 8.28e-12 | 60.5 |
MS.gene49250.t1 | MTR_4g054740 | 46.875 | 64 | 33 | 1 | 36 | 98 | 90 | 153 | 9.83e-12 | 62.4 |
MS.gene49250.t1 | MTR_2g016730 | 45.588 | 68 | 36 | 1 | 32 | 98 | 11 | 78 | 1.14e-11 | 63.2 |
MS.gene49250.t1 | MTR_4g054360 | 48.438 | 64 | 32 | 1 | 36 | 98 | 117 | 180 | 1.37e-11 | 62.4 |
MS.gene49250.t1 | MTR_2g103700 | 45.070 | 71 | 32 | 1 | 43 | 113 | 7 | 70 | 1.66e-11 | 60.8 |
MS.gene49250.t1 | MTR_8g069360 | 51.786 | 56 | 27 | 0 | 43 | 98 | 44 | 99 | 2.52e-11 | 62.4 |
MS.gene49250.t1 | MTR_8g032610 | 50.909 | 55 | 27 | 0 | 45 | 99 | 29 | 83 | 3.06e-11 | 61.6 |
MS.gene49250.t1 | MTR_3g098580 | 56.667 | 60 | 24 | 1 | 39 | 98 | 74 | 131 | 5.31e-11 | 60.8 |
MS.gene49250.t1 | MTR_3g095190 | 52.055 | 73 | 34 | 1 | 43 | 114 | 170 | 242 | 5.48e-11 | 61.2 |
MS.gene49250.t1 | MTR_4g054860 | 46.154 | 65 | 34 | 1 | 35 | 98 | 123 | 187 | 5.53e-11 | 60.8 |
MS.gene49250.t1 | MTR_5g075570 | 43.333 | 60 | 34 | 0 | 39 | 98 | 120 | 179 | 5.92e-11 | 60.8 |
MS.gene49250.t1 | MTR_5g008540 | 40.000 | 65 | 39 | 0 | 45 | 109 | 26 | 90 | 8.38e-11 | 57.0 |
MS.gene49250.t1 | MTR_6g012970 | 42.857 | 77 | 36 | 1 | 22 | 98 | 25 | 93 | 9.90e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49250.t1 | AT4G25470 | 54.976 | 211 | 71 | 7 | 8 | 207 | 19 | 216 | 2.64e-62 | 193 |
MS.gene49250.t1 | AT5G51990 | 51.174 | 213 | 81 | 6 | 10 | 207 | 18 | 222 | 7.99e-60 | 187 |
MS.gene49250.t1 | AT4G25480 | 56.633 | 196 | 68 | 4 | 21 | 207 | 29 | 216 | 2.01e-58 | 183 |
MS.gene49250.t1 | AT4G25490 | 56.122 | 196 | 69 | 4 | 21 | 207 | 26 | 213 | 8.99e-58 | 181 |
MS.gene49250.t1 | AT1G12610 | 46.667 | 210 | 93 | 4 | 14 | 207 | 1 | 207 | 1.60e-53 | 171 |
MS.gene49250.t1 | AT1G63030 | 45.876 | 194 | 84 | 4 | 18 | 207 | 5 | 181 | 3.97e-52 | 166 |
MS.gene49250.t1 | AT1G63030 | 45.876 | 194 | 84 | 4 | 18 | 207 | 5 | 181 | 3.97e-52 | 166 |
MS.gene49250.t1 | AT5G11590 | 62.245 | 98 | 34 | 1 | 27 | 124 | 38 | 132 | 3.17e-35 | 124 |
MS.gene49250.t1 | AT5G25810 | 61.702 | 94 | 35 | 1 | 32 | 124 | 24 | 117 | 3.50e-35 | 124 |
MS.gene49250.t1 | AT2G44940 | 61.290 | 93 | 36 | 0 | 32 | 124 | 89 | 181 | 1.63e-31 | 116 |
MS.gene49250.t1 | AT4G32800 | 53.684 | 95 | 44 | 0 | 30 | 124 | 6 | 100 | 2.30e-31 | 114 |
MS.gene49250.t1 | AT4G16750 | 62.500 | 80 | 30 | 0 | 38 | 117 | 35 | 114 | 4.51e-30 | 109 |
MS.gene49250.t1 | AT2G35700 | 47.368 | 133 | 70 | 0 | 38 | 170 | 40 | 172 | 4.53e-30 | 110 |
MS.gene49250.t1 | AT3G16280 | 41.530 | 183 | 90 | 5 | 39 | 208 | 57 | 235 | 4.16e-29 | 108 |
MS.gene49250.t1 | AT3G16280 | 41.530 | 183 | 90 | 5 | 39 | 208 | 75 | 253 | 4.98e-29 | 109 |
MS.gene49250.t1 | AT2G25820 | 64.474 | 76 | 27 | 0 | 42 | 117 | 25 | 100 | 2.70e-27 | 103 |
MS.gene49250.t1 | AT1G01250 | 48.148 | 108 | 53 | 1 | 13 | 117 | 12 | 119 | 9.61e-27 | 101 |
MS.gene49250.t1 | AT3G60490 | 41.667 | 168 | 75 | 4 | 37 | 186 | 64 | 226 | 1.06e-26 | 103 |
MS.gene49250.t1 | AT2G36450 | 42.105 | 190 | 88 | 7 | 31 | 207 | 3 | 183 | 2.20e-26 | 100 |
MS.gene49250.t1 | AT5G52020 | 40.698 | 172 | 98 | 2 | 39 | 207 | 61 | 231 | 2.64e-23 | 93.6 |
MS.gene49250.t1 | AT1G71450 | 54.878 | 82 | 37 | 0 | 42 | 123 | 23 | 104 | 6.55e-23 | 91.3 |
MS.gene49250.t1 | AT1G77200 | 46.429 | 112 | 59 | 1 | 6 | 117 | 7 | 117 | 6.43e-21 | 87.4 |
MS.gene49250.t1 | AT1G21910 | 46.237 | 93 | 43 | 1 | 43 | 128 | 50 | 142 | 1.85e-19 | 83.6 |
MS.gene49250.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 38 | 100 | 27 | 88 | 6.52e-19 | 79.7 |
MS.gene49250.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 38 | 100 | 27 | 88 | 7.29e-19 | 80.1 |
MS.gene49250.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 38 | 100 | 27 | 88 | 7.29e-19 | 80.1 |
MS.gene49250.t1 | AT1G74930 | 44.186 | 86 | 48 | 0 | 43 | 128 | 21 | 106 | 9.14e-19 | 80.9 |
MS.gene49250.t1 | AT2G47520 | 42.045 | 88 | 47 | 1 | 14 | 101 | 25 | 108 | 1.00e-18 | 80.1 |
MS.gene49250.t1 | AT4G36900 | 47.059 | 85 | 35 | 1 | 14 | 98 | 11 | 85 | 1.29e-18 | 80.5 |
MS.gene49250.t1 | AT1G33760 | 51.111 | 90 | 44 | 0 | 43 | 132 | 20 | 109 | 2.09e-18 | 79.7 |
MS.gene49250.t1 | AT3G50260 | 52.381 | 63 | 30 | 0 | 36 | 98 | 14 | 76 | 2.94e-18 | 78.6 |
MS.gene49250.t1 | AT5G67190 | 57.143 | 56 | 24 | 0 | 43 | 98 | 21 | 76 | 4.36e-18 | 78.6 |
MS.gene49250.t1 | AT2G23340 | 58.929 | 56 | 23 | 0 | 43 | 98 | 28 | 83 | 5.54e-18 | 78.2 |
MS.gene49250.t1 | AT4G06746 | 40.206 | 97 | 45 | 1 | 8 | 104 | 14 | 97 | 2.48e-17 | 75.9 |
MS.gene49250.t1 | AT1G19210 | 43.182 | 88 | 50 | 0 | 43 | 130 | 12 | 99 | 3.08e-17 | 76.6 |
MS.gene49250.t1 | AT1G22190 | 44.318 | 88 | 36 | 1 | 13 | 100 | 66 | 140 | 9.06e-17 | 76.6 |
MS.gene49250.t1 | AT4G13620 | 48.649 | 74 | 36 | 1 | 29 | 100 | 216 | 289 | 1.19e-16 | 77.8 |
MS.gene49250.t1 | AT3G16770 | 50.000 | 78 | 32 | 1 | 23 | 100 | 66 | 136 | 2.12e-16 | 75.5 |
MS.gene49250.t1 | AT2G22200 | 49.333 | 75 | 36 | 1 | 42 | 114 | 70 | 144 | 2.45e-16 | 75.5 |
MS.gene49250.t1 | AT5G21960 | 45.238 | 84 | 46 | 0 | 41 | 124 | 5 | 88 | 2.77e-16 | 74.7 |
MS.gene49250.t1 | AT2G33710 | 55.738 | 61 | 27 | 0 | 38 | 98 | 65 | 125 | 6.74e-16 | 73.6 |
MS.gene49250.t1 | AT2G33710 | 55.738 | 61 | 27 | 0 | 38 | 98 | 65 | 125 | 7.33e-16 | 73.9 |
MS.gene49250.t1 | AT4G39780 | 54.098 | 61 | 28 | 0 | 38 | 98 | 88 | 148 | 7.36e-16 | 74.3 |
MS.gene49250.t1 | AT5G13330 | 56.667 | 60 | 24 | 1 | 39 | 98 | 37 | 94 | 1.61e-15 | 72.4 |
MS.gene49250.t1 | AT5G61890 | 56.667 | 60 | 24 | 1 | 39 | 98 | 88 | 145 | 3.11e-15 | 72.4 |
MS.gene49250.t1 | AT3G15210 | 35.878 | 131 | 74 | 2 | 43 | 173 | 25 | 145 | 3.75e-15 | 71.6 |
MS.gene49250.t1 | AT1G03800 | 51.471 | 68 | 30 | 1 | 31 | 98 | 44 | 108 | 4.77e-15 | 71.6 |
MS.gene49250.t1 | AT3G11020 | 53.846 | 65 | 30 | 0 | 37 | 101 | 72 | 136 | 6.06e-15 | 72.4 |
MS.gene49250.t1 | AT1G12630 | 56.944 | 72 | 30 | 1 | 39 | 110 | 15 | 85 | 8.28e-15 | 70.1 |
MS.gene49250.t1 | AT1G78080 | 54.237 | 59 | 27 | 0 | 42 | 100 | 151 | 209 | 8.43e-15 | 72.0 |
MS.gene49250.t1 | AT1G28370 | 55.357 | 56 | 25 | 0 | 43 | 98 | 20 | 75 | 1.20e-14 | 69.3 |
MS.gene49250.t1 | AT4G31060 | 42.529 | 87 | 45 | 1 | 12 | 98 | 1 | 82 | 1.38e-14 | 69.3 |
MS.gene49250.t1 | AT1G28370 | 55.357 | 56 | 25 | 0 | 43 | 98 | 58 | 113 | 1.78e-14 | 69.7 |
MS.gene49250.t1 | AT2G20880 | 45.000 | 80 | 42 | 1 | 19 | 98 | 165 | 242 | 1.80e-14 | 71.2 |
MS.gene49250.t1 | AT5G05410 | 55.932 | 59 | 26 | 0 | 43 | 101 | 79 | 137 | 1.99e-14 | 70.9 |
MS.gene49250.t1 | AT5G05410 | 57.143 | 56 | 24 | 0 | 43 | 98 | 79 | 134 | 2.01e-14 | 71.2 |
MS.gene49250.t1 | AT5G65130 | 39.286 | 112 | 55 | 3 | 1 | 100 | 60 | 170 | 2.14e-14 | 70.5 |
MS.gene49250.t1 | AT5G44210 | 55.357 | 56 | 25 | 0 | 43 | 98 | 33 | 88 | 2.21e-14 | 69.3 |
MS.gene49250.t1 | AT5G65130 | 39.286 | 112 | 55 | 3 | 1 | 100 | 58 | 168 | 2.27e-14 | 70.5 |
MS.gene49250.t1 | AT1G71520 | 38.000 | 100 | 45 | 3 | 37 | 126 | 8 | 100 | 2.44e-14 | 67.8 |
MS.gene49250.t1 | AT1G72360 | 43.421 | 76 | 43 | 0 | 23 | 98 | 54 | 129 | 4.58e-14 | 69.3 |
MS.gene49250.t1 | AT1G36060 | 56.140 | 57 | 25 | 0 | 42 | 98 | 142 | 198 | 4.74e-14 | 69.7 |
MS.gene49250.t1 | AT4G28140 | 50.847 | 59 | 29 | 0 | 42 | 100 | 142 | 200 | 5.02e-14 | 69.7 |
MS.gene49250.t1 | AT5G47230 | 42.708 | 96 | 51 | 3 | 4 | 98 | 120 | 212 | 9.79e-14 | 68.9 |
MS.gene49250.t1 | AT1G28360 | 45.946 | 74 | 33 | 1 | 43 | 116 | 12 | 78 | 1.16e-13 | 67.0 |
MS.gene49250.t1 | AT4G11140 | 41.975 | 81 | 38 | 2 | 43 | 123 | 87 | 158 | 1.68e-13 | 68.2 |
MS.gene49250.t1 | AT3G57600 | 55.357 | 56 | 25 | 0 | 43 | 98 | 28 | 83 | 1.95e-13 | 67.8 |
MS.gene49250.t1 | AT1G72360 | 46.032 | 63 | 34 | 0 | 36 | 98 | 18 | 80 | 2.63e-13 | 66.6 |
MS.gene49250.t1 | AT4G27950 | 50.877 | 57 | 28 | 0 | 43 | 99 | 118 | 174 | 2.63e-13 | 67.8 |
MS.gene49250.t1 | AT1G22810 | 39.216 | 102 | 47 | 3 | 43 | 136 | 14 | 108 | 2.67e-13 | 65.1 |
MS.gene49250.t1 | AT5G51190 | 52.381 | 63 | 27 | 2 | 37 | 98 | 68 | 128 | 4.50e-13 | 65.9 |
MS.gene49250.t1 | AT1G77640 | 45.556 | 90 | 43 | 1 | 43 | 126 | 43 | 132 | 5.02e-13 | 66.2 |
MS.gene49250.t1 | AT1G72360 | 46.032 | 63 | 34 | 0 | 36 | 98 | 69 | 131 | 8.05e-13 | 65.9 |
MS.gene49250.t1 | AT5G43410 | 51.667 | 60 | 28 | 1 | 40 | 98 | 12 | 71 | 1.23e-12 | 62.8 |
MS.gene49250.t1 | AT1G43160 | 38.017 | 121 | 64 | 2 | 43 | 161 | 61 | 172 | 1.33e-12 | 64.3 |
MS.gene49250.t1 | AT5G64750 | 45.205 | 73 | 39 | 1 | 50 | 122 | 192 | 263 | 1.44e-12 | 65.9 |
MS.gene49250.t1 | AT5G07580 | 45.570 | 79 | 40 | 2 | 37 | 114 | 106 | 182 | 1.64e-12 | 64.3 |
MS.gene49250.t1 | AT5G25390 | 51.786 | 56 | 27 | 0 | 43 | 98 | 7 | 62 | 2.66e-12 | 63.2 |
MS.gene49250.t1 | AT1G75490 | 50.000 | 60 | 30 | 0 | 42 | 101 | 41 | 100 | 2.73e-12 | 63.5 |
MS.gene49250.t1 | AT3G61630 | 43.038 | 79 | 39 | 1 | 43 | 121 | 105 | 177 | 3.43e-12 | 64.7 |
MS.gene49250.t1 | AT1G15360 | 53.571 | 56 | 26 | 0 | 43 | 98 | 7 | 62 | 3.69e-12 | 63.2 |
MS.gene49250.t1 | AT1G15360 | 53.571 | 56 | 26 | 0 | 43 | 98 | 7 | 62 | 3.69e-12 | 63.2 |
MS.gene49250.t1 | AT3G23230 | 46.774 | 62 | 32 | 1 | 43 | 103 | 20 | 81 | 4.02e-12 | 61.6 |
MS.gene49250.t1 | AT5G53290 | 37.647 | 85 | 53 | 0 | 15 | 99 | 97 | 181 | 4.19e-12 | 64.7 |
MS.gene49250.t1 | AT5G25190 | 55.357 | 56 | 25 | 0 | 43 | 98 | 8 | 63 | 6.13e-12 | 62.4 |
MS.gene49250.t1 | AT5G07310 | 54.688 | 64 | 27 | 1 | 39 | 102 | 90 | 151 | 6.76e-12 | 63.2 |
MS.gene49250.t1 | AT5G19790 | 43.590 | 78 | 40 | 2 | 24 | 100 | 5 | 79 | 8.06e-12 | 63.2 |
MS.gene49250.t1 | AT2G44840 | 52.632 | 57 | 26 | 1 | 43 | 98 | 92 | 148 | 8.20e-12 | 62.8 |
MS.gene49250.t1 | AT4G17490 | 42.697 | 89 | 46 | 3 | 13 | 98 | 107 | 193 | 8.85e-12 | 63.2 |
MS.gene49250.t1 | AT5G47220 | 52.632 | 57 | 26 | 1 | 43 | 98 | 117 | 173 | 1.87e-11 | 62.0 |
MS.gene49250.t1 | AT4G23750 | 47.368 | 57 | 30 | 0 | 43 | 99 | 122 | 178 | 2.38e-11 | 62.4 |
MS.gene49250.t1 | AT4G23750 | 47.368 | 57 | 30 | 0 | 43 | 99 | 122 | 178 | 2.38e-11 | 62.4 |
MS.gene49250.t1 | AT5G61590 | 48.276 | 87 | 42 | 2 | 25 | 110 | 91 | 175 | 2.44e-11 | 60.8 |
MS.gene49250.t1 | AT5G18450 | 52.632 | 57 | 27 | 0 | 42 | 98 | 33 | 89 | 2.47e-11 | 62.0 |
MS.gene49250.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 43 | 98 | 14 | 69 | 3.30e-11 | 61.6 |
MS.gene49250.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 43 | 98 | 14 | 69 | 3.30e-11 | 61.6 |
MS.gene49250.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 43 | 98 | 14 | 69 | 3.30e-11 | 61.6 |
MS.gene49250.t1 | AT5G50080 | 58.929 | 56 | 23 | 0 | 43 | 98 | 86 | 141 | 3.43e-11 | 60.8 |
MS.gene49250.t1 | AT1G12980 | 53.571 | 56 | 26 | 0 | 43 | 98 | 57 | 112 | 3.79e-11 | 61.6 |
MS.gene49250.t1 | AT5G50080 | 58.929 | 56 | 23 | 0 | 43 | 98 | 77 | 132 | 3.81e-11 | 60.8 |
MS.gene49250.t1 | AT3G20310 | 46.774 | 62 | 33 | 0 | 37 | 98 | 21 | 82 | 5.34e-11 | 60.5 |
MS.gene49250.t1 | AT2G40350 | 51.786 | 56 | 27 | 0 | 43 | 98 | 74 | 129 | 5.39e-11 | 59.3 |
MS.gene49250.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 43 | 98 | 72 | 127 | 5.91e-11 | 60.8 |
MS.gene49250.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 43 | 98 | 72 | 127 | 6.16e-11 | 61.2 |
MS.gene49250.t1 | AT2G40350 | 51.786 | 56 | 27 | 0 | 43 | 98 | 67 | 122 | 7.53e-11 | 58.9 |
MS.gene49250.t1 | AT1G12890 | 42.308 | 78 | 42 | 1 | 21 | 98 | 2 | 76 | 7.73e-11 | 59.7 |
MS.gene49250.t1 | AT2G40340 | 51.786 | 56 | 27 | 0 | 43 | 98 | 79 | 134 | 7.98e-11 | 60.8 |
Find 63 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATATGTCATTGCCGAATT+TGG | 0.134126 | 6.4:+37544552 | None:intergenic |
TTCTCCCTGCACGCTTCTTT+GGG | 0.183287 | 6.4:-37544630 | None:intergenic |
TTTCTCCCTGCACGCTTCTT+TGG | 0.188974 | 6.4:-37544631 | None:intergenic |
CGCACATCCTTGGTGGAAAT+TGG | 0.234142 | 6.4:-37544592 | None:intergenic |
GGAGTAGGAACTTAGGTAAA+TGG | 0.262110 | 6.4:+37544695 | MS.gene49250:CDS |
GACTCGCCACCCGGTGTATA+GGG | 0.268325 | 6.4:+37544666 | MS.gene49250:CDS |
TCCAGAGTCGTTGAGGAATA+TGG | 0.323237 | 6.4:+37545065 | MS.gene49250:CDS |
GGAGCAACTTATGTTTAGTA+TGG | 0.332060 | 6.4:+37544999 | MS.gene49250:CDS |
AGACTCGCCACCCGGTGTAT+AGG | 0.340003 | 6.4:+37544665 | MS.gene49250:CDS |
CCATGAGAGACCTCCAAATT+CGG | 0.404911 | 6.4:-37544565 | None:intergenic |
TGGGCTCGTGCTGCCATCTC+AGG | 0.409174 | 6.4:-37544778 | None:intergenic |
GCTCCCTATTCCAGTCTCTA+TGG | 0.426253 | 6.4:+37544867 | MS.gene49250:CDS |
GAGTAGGAACTTAGGTAAAT+GGG | 0.429386 | 6.4:+37544696 | MS.gene49250:CDS |
CTAGTCAATAAAATCTTGTC+TGG | 0.430500 | 6.4:-37544940 | None:intergenic |
AAGATATTGAGGTGTCACTA+TGG | 0.433062 | 6.4:+37545148 | MS.gene49250:CDS |
CCGAATTTGGAGGTCTCTCA+TGG | 0.437043 | 6.4:+37544565 | MS.gene49250:CDS |
GTCTCCATAGAGACTGGAAT+AGG | 0.440038 | 6.4:-37544871 | None:intergenic |
CGCAGCTAACCGCACATCCT+TGG | 0.450276 | 6.4:-37544602 | None:intergenic |
TGCAGACTTTCAAGATATTG+AGG | 0.451903 | 6.4:+37545137 | MS.gene49250:CDS |
GCCATATTCCTCAACGACTC+TGG | 0.459205 | 6.4:-37545066 | None:intergenic |
CGTGCTGCCATCTCAGGCGT+TGG | 0.464880 | 6.4:-37544772 | None:intergenic |
TCAACTTTGCAGACTCTGCC+TGG | 0.466308 | 6.4:+37544842 | MS.gene49250:CDS |
TCTCCATAGAGACTGGAATA+GGG | 0.479432 | 6.4:-37544870 | None:intergenic |
TATGTCATTGCCGAATTTGG+AGG | 0.491858 | 6.4:+37544555 | None:intergenic |
ATGCCAATGTCGCGACATCA+TGG | 0.500277 | 6.4:-37544798 | None:intergenic |
TGTATAGGGGTGTGAGGAGT+AGG | 0.504875 | 6.4:+37544680 | MS.gene49250:CDS |
GGCGGCAGCAGAAGCCGCAG+AGG | 0.519491 | 6.4:+37544909 | MS.gene49250:CDS |
CATGCTCAAAGCTATGTGTA+GGG | 0.523141 | 6.4:-37545098 | None:intergenic |
AGAGTCTGCAAAGTTGAGAC+AGG | 0.526773 | 6.4:-37544836 | None:intergenic |
AGTACCCCAAAGAAGCGTGC+AGG | 0.528224 | 6.4:+37544625 | MS.gene49250:CDS |
GGAGACAAAAGATATACAAA+AGG | 0.529482 | 6.4:+37544888 | MS.gene49250:CDS |
TCATGCTCAAAGCTATGTGT+AGG | 0.531088 | 6.4:-37545099 | None:intergenic |
ACTTATGTTTAGTATGGAAG+AGG | 0.531676 | 6.4:+37545005 | MS.gene49250:CDS |
AAGTTGCTCCTCTGTGGCAT+CGG | 0.542436 | 6.4:-37544986 | None:intergenic |
GACTGGAATAGGGAGCCGCC+AGG | 0.546979 | 6.4:-37544860 | None:intergenic |
AGCCCATGATGTCGCGACAT+TGG | 0.548120 | 6.4:+37544795 | MS.gene49250:CDS |
AACGTTTCCAACGCCTGAGA+TGG | 0.548835 | 6.4:+37544765 | MS.gene49250:CDS |
TCTCCCTGCACGCTTCTTTG+GGG | 0.550146 | 6.4:-37544629 | None:intergenic |
GTTCAAGGAGACTCGCCACC+CGG | 0.557277 | 6.4:+37544657 | MS.gene49250:CDS |
TAAATGGGTGTGTGAAATGA+GGG | 0.559080 | 6.4:+37544711 | MS.gene49250:CDS |
AGCTTTGAGCATGAATATCA+AGG | 0.559097 | 6.4:+37545108 | MS.gene49250:CDS |
TGCCAATGTCGCGACATCAT+GGG | 0.564925 | 6.4:-37544797 | None:intergenic |
TGCAGGGAGAAAGAAGTTCA+AGG | 0.565986 | 6.4:+37544642 | MS.gene49250:CDS |
GTAAATGGGTGTGTGAAATG+AGG | 0.586819 | 6.4:+37544710 | MS.gene49250:CDS |
ACTCGCCACCCGGTGTATAG+GGG | 0.586878 | 6.4:+37544667 | MS.gene49250:CDS |
AGCTAACCGCACATCCTTGG+TGG | 0.589838 | 6.4:-37544599 | None:intergenic |
GGTGTGAGGAGTAGGAACTT+AGG | 0.592784 | 6.4:+37544688 | MS.gene49250:CDS |
GTCGCGACATTGGCATTCAG+AGG | 0.598542 | 6.4:+37544805 | MS.gene49250:CDS |
GTCTGGTTTGAAAGCCTCTG+CGG | 0.601416 | 6.4:-37544923 | None:intergenic |
GACAAAAGATATACAAAAGG+CGG | 0.601517 | 6.4:+37544891 | MS.gene49250:CDS |
ACCCGGTGTATAGGGGTGTG+AGG | 0.607238 | 6.4:+37544674 | MS.gene49250:CDS |
TCCTCACACCCCTATACACC+GGG | 0.607770 | 6.4:-37544675 | None:intergenic |
TGAACATTCCAGAGTCGTTG+AGG | 0.613398 | 6.4:+37545058 | MS.gene49250:CDS |
CTCCTCACACCCCTATACAC+CGG | 0.618465 | 6.4:-37544676 | None:intergenic |
GTACCCCAAAGAAGCGTGCA+GGG | 0.625200 | 6.4:+37544626 | MS.gene49250:CDS |
CAATTTCCACCAAGGATGTG+CGG | 0.634289 | 6.4:+37544593 | MS.gene49250:CDS |
TGGAATGCCAATTTCCACCA+AGG | 0.655295 | 6.4:+37544585 | MS.gene49250:CDS |
AAACATAAGTTGCTCCTCTG+TGG | 0.660402 | 6.4:-37544992 | None:intergenic |
ATGCTCAAAGCTATGTGTAG+GGG | 0.666315 | 6.4:-37545097 | None:intergenic |
ATTGACTAGTGATATTGACA+CGG | 0.675849 | 6.4:+37544954 | MS.gene49250:CDS |
TGTAGCTGCCGATGCCACAG+AGG | 0.707467 | 6.4:+37544978 | MS.gene49250:CDS |
TCACACCCCTATACACCGGG+TGG | 0.714638 | 6.4:-37544672 | None:intergenic |
ACTTTGCAGACTCTGCCTGG+CGG | 0.759244 | 6.4:+37544845 | MS.gene49250:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | CTAACAAAAAGACTAAGATA+TGG | + | chr6.4:37544737-37544756 | MS.gene49250:CDS | 25.0% |
!!! | CATATCTTAGTCTTTTTGTT+AGG | - | chr6.4:37544739-37544758 | None:intergenic | 25.0% |
AAAAAGACTAAGATATGGCT+AGG | + | chr6.4:37544742-37544761 | MS.gene49250:CDS | 30.0% | |
ACTTATGTTTAGTATGGAAG+AGG | + | chr6.4:37545005-37545024 | MS.gene49250:CDS | 30.0% | |
ATTGACTAGTGATATTGACA+CGG | + | chr6.4:37544954-37544973 | MS.gene49250:CDS | 30.0% | |
CTAGTCAATAAAATCTTGTC+TGG | - | chr6.4:37544943-37544962 | None:intergenic | 30.0% | |
GACAAAAGATATACAAAAGG+CGG | + | chr6.4:37544891-37544910 | MS.gene49250:CDS | 30.0% | |
GGAGACAAAAGATATACAAA+AGG | + | chr6.4:37544888-37544907 | MS.gene49250:CDS | 30.0% | |
AGAAGAAGAAGAAAAAGAGG+AGG | + | chr6.4:37545029-37545048 | MS.gene49250:CDS | 35.0% | |
GAGTAGGAACTTAGGTAAAT+GGG | + | chr6.4:37544696-37544715 | MS.gene49250:CDS | 35.0% | |
GGAAGAAGAAGAAGAAAAAG+AGG | + | chr6.4:37545026-37545045 | MS.gene49250:CDS | 35.0% | |
GGAGCAACTTATGTTTAGTA+TGG | + | chr6.4:37544999-37545018 | MS.gene49250:CDS | 35.0% | |
TAAATGGGTGTGTGAAATGA+GGG | + | chr6.4:37544711-37544730 | MS.gene49250:CDS | 35.0% | |
TGCAGACTTTCAAGATATTG+AGG | + | chr6.4:37545137-37545156 | MS.gene49250:CDS | 35.0% | |
!! | AAGATATTGAGGTGTCACTA+TGG | + | chr6.4:37545148-37545167 | MS.gene49250:CDS | 35.0% |
!! | AGCTTTGAGCATGAATATCA+AGG | + | chr6.4:37545108-37545127 | MS.gene49250:CDS | 35.0% |
AAACATAAGTTGCTCCTCTG+TGG | - | chr6.4:37544995-37545014 | None:intergenic | 40.0% | |
ATGCTCAAAGCTATGTGTAG+GGG | - | chr6.4:37545100-37545119 | None:intergenic | 40.0% | |
CATGCTCAAAGCTATGTGTA+GGG | - | chr6.4:37545101-37545120 | None:intergenic | 40.0% | |
GGAGTAGGAACTTAGGTAAA+TGG | + | chr6.4:37544695-37544714 | MS.gene49250:CDS | 40.0% | |
GTAAATGGGTGTGTGAAATG+AGG | + | chr6.4:37544710-37544729 | MS.gene49250:CDS | 40.0% | |
TCATGCTCAAAGCTATGTGT+AGG | - | chr6.4:37545102-37545121 | None:intergenic | 40.0% | |
TCTCCATAGAGACTGGAATA+GGG | - | chr6.4:37544873-37544892 | None:intergenic | 40.0% | |
! | TCTTTTGTCTCCATAGAGAC+TGG | - | chr6.4:37544880-37544899 | None:intergenic | 40.0% |
AGAGTCTGCAAAGTTGAGAC+AGG | - | chr6.4:37544839-37544858 | None:intergenic | 45.0% | |
CAATTTCCACCAAGGATGTG+CGG | + | chr6.4:37544593-37544612 | MS.gene49250:CDS | 45.0% | |
CCATGAGAGACCTCCAAATT+CGG | - | chr6.4:37544568-37544587 | None:intergenic | 45.0% | |
GTCTCCATAGAGACTGGAAT+AGG | - | chr6.4:37544874-37544893 | None:intergenic | 45.0% | |
TCCAGAGTCGTTGAGGAATA+TGG | + | chr6.4:37545065-37545084 | MS.gene49250:CDS | 45.0% | |
TGAACATTCCAGAGTCGTTG+AGG | + | chr6.4:37545058-37545077 | MS.gene49250:CDS | 45.0% | |
TGCAGGGAGAAAGAAGTTCA+AGG | + | chr6.4:37544642-37544661 | MS.gene49250:CDS | 45.0% | |
TGGAATGCCAATTTCCACCA+AGG | + | chr6.4:37544585-37544604 | MS.gene49250:CDS | 45.0% | |
AACGTTTCCAACGCCTGAGA+TGG | + | chr6.4:37544765-37544784 | MS.gene49250:CDS | 50.0% | |
AAGTTGCTCCTCTGTGGCAT+CGG | - | chr6.4:37544989-37545008 | None:intergenic | 50.0% | |
ATGCCAATGTCGCGACATCA+TGG | - | chr6.4:37544801-37544820 | None:intergenic | 50.0% | |
CCGAATTTGGAGGTCTCTCA+TGG | + | chr6.4:37544565-37544584 | MS.gene49250:CDS | 50.0% | |
CGCACATCCTTGGTGGAAAT+TGG | - | chr6.4:37544595-37544614 | None:intergenic | 50.0% | |
GCCATATTCCTCAACGACTC+TGG | - | chr6.4:37545069-37545088 | None:intergenic | 50.0% | |
GCTCCCTATTCCAGTCTCTA+TGG | + | chr6.4:37544867-37544886 | MS.gene49250:CDS | 50.0% | |
GGTGTGAGGAGTAGGAACTT+AGG | + | chr6.4:37544688-37544707 | MS.gene49250:CDS | 50.0% | |
TCAACTTTGCAGACTCTGCC+TGG | + | chr6.4:37544842-37544861 | MS.gene49250:CDS | 50.0% | |
TGCCAATGTCGCGACATCAT+GGG | - | chr6.4:37544800-37544819 | None:intergenic | 50.0% | |
TTCTCCCTGCACGCTTCTTT+GGG | - | chr6.4:37544633-37544652 | None:intergenic | 50.0% | |
TTTCTCCCTGCACGCTTCTT+TGG | - | chr6.4:37544634-37544653 | None:intergenic | 50.0% | |
! | GTCTGGTTTGAAAGCCTCTG+CGG | - | chr6.4:37544926-37544945 | None:intergenic | 50.0% |
! | TGTATAGGGGTGTGAGGAGT+AGG | + | chr6.4:37544680-37544699 | MS.gene49250:CDS | 50.0% |
ACTTTGCAGACTCTGCCTGG+CGG | + | chr6.4:37544845-37544864 | MS.gene49250:CDS | 55.0% | |
AGCCCATGATGTCGCGACAT+TGG | + | chr6.4:37544795-37544814 | MS.gene49250:CDS | 55.0% | |
AGCTAACCGCACATCCTTGG+TGG | - | chr6.4:37544602-37544621 | None:intergenic | 55.0% | |
CTCCTCACACCCCTATACAC+CGG | - | chr6.4:37544679-37544698 | None:intergenic | 55.0% | |
GTCGCGACATTGGCATTCAG+AGG | + | chr6.4:37544805-37544824 | MS.gene49250:CDS | 55.0% | |
TCCTCACACCCCTATACACC+GGG | - | chr6.4:37544678-37544697 | None:intergenic | 55.0% | |
TCTCCCTGCACGCTTCTTTG+GGG | - | chr6.4:37544632-37544651 | None:intergenic | 55.0% | |
! | AGTACCCCAAAGAAGCGTGC+AGG | + | chr6.4:37544625-37544644 | MS.gene49250:CDS | 55.0% |
! | GTACCCCAAAGAAGCGTGCA+GGG | + | chr6.4:37544626-37544645 | MS.gene49250:CDS | 55.0% |
ACTCGCCACCCGGTGTATAG+GGG | + | chr6.4:37544667-37544686 | MS.gene49250:CDS | 60.0% | |
AGACTCGCCACCCGGTGTAT+AGG | + | chr6.4:37544665-37544684 | MS.gene49250:CDS | 60.0% | |
CGCAGCTAACCGCACATCCT+TGG | - | chr6.4:37544605-37544624 | None:intergenic | 60.0% | |
GACTCGCCACCCGGTGTATA+GGG | + | chr6.4:37544666-37544685 | MS.gene49250:CDS | 60.0% | |
GTTCAAGGAGACTCGCCACC+CGG | + | chr6.4:37544657-37544676 | MS.gene49250:CDS | 60.0% | |
TCACACCCCTATACACCGGG+TGG | - | chr6.4:37544675-37544694 | None:intergenic | 60.0% | |
TGTAGCTGCCGATGCCACAG+AGG | + | chr6.4:37544978-37544997 | MS.gene49250:CDS | 60.0% | |
! | ACCCGGTGTATAGGGGTGTG+AGG | + | chr6.4:37544674-37544693 | MS.gene49250:CDS | 60.0% |
CGTGCTGCCATCTCAGGCGT+TGG | - | chr6.4:37544775-37544794 | None:intergenic | 65.0% | |
GACTGGAATAGGGAGCCGCC+AGG | - | chr6.4:37544863-37544882 | None:intergenic | 65.0% | |
TGGGCTCGTGCTGCCATCTC+AGG | - | chr6.4:37544781-37544800 | None:intergenic | 65.0% | |
GGCGGCAGCAGAAGCCGCAG+AGG | + | chr6.4:37544909-37544928 | MS.gene49250:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 37544556 | 37545185 | 37544556 | ID=MS.gene49250 |
chr6.4 | mRNA | 37544556 | 37545185 | 37544556 | ID=MS.gene49250.t1;Parent=MS.gene49250 |
chr6.4 | exon | 37544556 | 37545185 | 37544556 | ID=MS.gene49250.t1.exon1;Parent=MS.gene49250.t1 |
chr6.4 | CDS | 37544556 | 37545185 | 37544556 | ID=cds.MS.gene49250.t1;Parent=MS.gene49250.t1 |
Gene Sequence |
Protein sequence |