Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30842.t1 | ABG75914.1 | 91.2 | 215 | 19 | 0 | 1 | 215 | 1 | 215 | 5.60E-106 | 393.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30842.t1 | Q9M0L0 | 52.8 | 218 | 88 | 6 | 7 | 215 | 5 | 216 | 2.4e-44 | 180.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30842.t1 | A8DPG5 | 91.2 | 215 | 19 | 0 | 1 | 215 | 1 | 215 | 4.1e-106 | 393.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene30842.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30842.t1 | MTR_6g465460 | 90.909 | 209 | 19 | 0 | 1 | 209 | 1 | 209 | 1.39e-129 | 366 |
MS.gene30842.t1 | MTR_6g465450 | 83.412 | 211 | 33 | 1 | 1 | 209 | 1 | 211 | 8.81e-127 | 358 |
MS.gene30842.t1 | MTR_6g465430 | 82.381 | 210 | 36 | 1 | 1 | 209 | 1 | 210 | 8.09e-119 | 338 |
MS.gene30842.t1 | MTR_6g465420 | 79.621 | 211 | 40 | 2 | 1 | 209 | 1 | 210 | 2.41e-116 | 332 |
MS.gene30842.t1 | MTR_6g465690 | 68.519 | 216 | 57 | 5 | 1 | 207 | 3 | 216 | 7.00e-97 | 283 |
MS.gene30842.t1 | MTR_6g466000 | 63.810 | 210 | 63 | 4 | 17 | 215 | 20 | 227 | 3.75e-94 | 275 |
MS.gene30842.t1 | MTR_6g465510 | 70.244 | 205 | 43 | 2 | 27 | 215 | 6 | 208 | 1.53e-91 | 267 |
MS.gene30842.t1 | MTR_6g465530 | 69.898 | 196 | 49 | 4 | 27 | 215 | 6 | 198 | 2.19e-90 | 264 |
MS.gene30842.t1 | MTR_6g466130 | 66.667 | 192 | 59 | 2 | 27 | 215 | 39 | 228 | 4.54e-83 | 246 |
MS.gene30842.t1 | MTR_1g101600 | 59.375 | 192 | 68 | 4 | 28 | 215 | 15 | 200 | 2.70e-67 | 206 |
MS.gene30842.t1 | MTR_6g465850 | 48.043 | 281 | 78 | 6 | 1 | 215 | 1 | 279 | 7.18e-66 | 204 |
MS.gene30842.t1 | MTR_6g465990 | 51.905 | 210 | 68 | 5 | 17 | 215 | 6 | 193 | 2.93e-65 | 200 |
MS.gene30842.t1 | MTR_6g466020 | 52.850 | 193 | 70 | 5 | 20 | 212 | 9 | 180 | 1.29e-56 | 177 |
MS.gene30842.t1 | MTR_5g010940 | 43.723 | 231 | 108 | 6 | 1 | 215 | 3 | 227 | 3.99e-53 | 170 |
MS.gene30842.t1 | MTR_4g102660 | 52.511 | 219 | 84 | 10 | 14 | 215 | 3 | 218 | 1.77e-51 | 166 |
MS.gene30842.t1 | MTR_5g010930 | 44.828 | 203 | 94 | 4 | 29 | 215 | 24 | 224 | 1.98e-51 | 166 |
MS.gene30842.t1 | MTR_5g010910 | 44.059 | 202 | 93 | 5 | 30 | 215 | 25 | 222 | 7.60e-48 | 157 |
MS.gene30842.t1 | MTR_8g006410 | 58.242 | 91 | 38 | 0 | 38 | 128 | 36 | 126 | 6.13e-33 | 118 |
MS.gene30842.t1 | MTR_3g110205 | 54.455 | 101 | 46 | 0 | 43 | 143 | 32 | 132 | 2.27e-32 | 116 |
MS.gene30842.t1 | MTR_7g046260 | 56.383 | 94 | 41 | 0 | 35 | 128 | 42 | 135 | 8.12e-31 | 113 |
MS.gene30842.t1 | MTR_7g117690 | 62.500 | 80 | 30 | 0 | 49 | 128 | 23 | 102 | 8.92e-31 | 111 |
MS.gene30842.t1 | MTR_2g085015 | 42.197 | 173 | 90 | 4 | 6 | 174 | 5 | 171 | 1.06e-30 | 112 |
MS.gene30842.t1 | MTR_5g012910 | 62.025 | 79 | 30 | 0 | 50 | 128 | 24 | 102 | 5.18e-30 | 109 |
MS.gene30842.t1 | MTR_8g027465 | 49.550 | 111 | 49 | 3 | 22 | 128 | 9 | 116 | 2.79e-29 | 107 |
MS.gene30842.t1 | MTR_8g013860 | 52.525 | 99 | 46 | 1 | 31 | 128 | 23 | 121 | 3.61e-28 | 105 |
MS.gene30842.t1 | MTR_8g102800 | 50.943 | 106 | 49 | 2 | 24 | 128 | 8 | 111 | 1.08e-27 | 105 |
MS.gene30842.t1 | MTR_2g101340 | 51.485 | 101 | 43 | 1 | 34 | 128 | 15 | 115 | 2.11e-27 | 103 |
MS.gene30842.t1 | MTR_6g088405 | 60.256 | 78 | 31 | 0 | 51 | 128 | 41 | 118 | 3.47e-27 | 103 |
MS.gene30842.t1 | MTR_4g100650 | 61.538 | 78 | 30 | 0 | 51 | 128 | 71 | 148 | 2.78e-26 | 102 |
MS.gene30842.t1 | MTR_4g102670 | 55.696 | 79 | 34 | 1 | 50 | 128 | 11 | 88 | 1.24e-24 | 95.5 |
MS.gene30842.t1 | MTR_4g035430 | 52.083 | 96 | 41 | 1 | 39 | 134 | 22 | 112 | 4.79e-24 | 95.5 |
MS.gene30842.t1 | MTR_6g088425 | 49.587 | 121 | 50 | 2 | 24 | 134 | 10 | 129 | 7.74e-23 | 92.4 |
MS.gene30842.t1 | MTR_5g008590 | 37.288 | 177 | 94 | 3 | 54 | 214 | 11 | 186 | 5.05e-21 | 86.7 |
MS.gene30842.t1 | MTR_1g006660 | 59.494 | 79 | 32 | 0 | 50 | 128 | 43 | 121 | 7.06e-21 | 87.8 |
MS.gene30842.t1 | MTR_1g060910 | 37.209 | 172 | 62 | 7 | 38 | 187 | 3 | 150 | 2.21e-18 | 79.3 |
MS.gene30842.t1 | MTR_1g014780 | 41.667 | 96 | 48 | 2 | 53 | 140 | 37 | 132 | 3.22e-17 | 77.4 |
MS.gene30842.t1 | MTR_2g435590 | 53.030 | 66 | 31 | 0 | 47 | 112 | 89 | 154 | 6.97e-17 | 77.0 |
MS.gene30842.t1 | MTR_5g008550 | 50.000 | 82 | 41 | 0 | 54 | 135 | 21 | 102 | 1.04e-16 | 75.5 |
MS.gene30842.t1 | MTR_3g105510 | 50.000 | 70 | 35 | 0 | 54 | 123 | 37 | 106 | 1.56e-16 | 75.9 |
MS.gene30842.t1 | MTR_5g008470 | 45.000 | 80 | 44 | 0 | 56 | 135 | 77 | 156 | 1.66e-16 | 74.7 |
MS.gene30842.t1 | MTR_5g083340 | 62.069 | 58 | 22 | 0 | 54 | 111 | 85 | 142 | 1.68e-16 | 77.4 |
MS.gene30842.t1 | MTR_1g014820 | 41.304 | 92 | 50 | 1 | 53 | 140 | 26 | 117 | 1.94e-16 | 75.9 |
MS.gene30842.t1 | MTR_3g074130 | 51.351 | 74 | 34 | 1 | 38 | 111 | 136 | 207 | 2.00e-16 | 77.0 |
MS.gene30842.t1 | MTR_2g105380 | 39.000 | 100 | 58 | 1 | 12 | 111 | 78 | 174 | 2.59e-16 | 76.6 |
MS.gene30842.t1 | MTR_3g102100 | 56.897 | 58 | 25 | 0 | 54 | 111 | 45 | 102 | 4.07e-16 | 73.2 |
MS.gene30842.t1 | MTR_1g090170 | 53.968 | 63 | 29 | 0 | 49 | 111 | 147 | 209 | 4.94e-16 | 75.5 |
MS.gene30842.t1 | MTR_2g043030 | 27.368 | 190 | 106 | 4 | 53 | 215 | 18 | 202 | 5.13e-16 | 73.6 |
MS.gene30842.t1 | MTR_7g021010 | 42.697 | 89 | 50 | 1 | 45 | 132 | 2 | 90 | 6.36e-16 | 72.0 |
MS.gene30842.t1 | MTR_8g090350 | 34.228 | 149 | 90 | 4 | 53 | 195 | 112 | 258 | 6.81e-16 | 74.7 |
MS.gene30842.t1 | MTR_2g043050 | 42.391 | 92 | 52 | 1 | 53 | 143 | 18 | 109 | 8.43e-16 | 73.6 |
MS.gene30842.t1 | MTR_5g062700 | 57.627 | 59 | 25 | 0 | 53 | 111 | 172 | 230 | 8.88e-16 | 75.1 |
MS.gene30842.t1 | MTR_1g014860 | 39.130 | 92 | 49 | 1 | 49 | 133 | 17 | 108 | 8.97e-16 | 73.6 |
MS.gene30842.t1 | MTR_1g090170 | 53.968 | 63 | 29 | 0 | 49 | 111 | 234 | 296 | 9.07e-16 | 75.5 |
MS.gene30842.t1 | MTR_1g101550 | 40.426 | 141 | 72 | 3 | 54 | 183 | 57 | 196 | 1.04e-15 | 73.6 |
MS.gene30842.t1 | MTR_2g090235 | 57.627 | 59 | 25 | 0 | 53 | 111 | 217 | 275 | 1.45e-15 | 74.7 |
MS.gene30842.t1 | MTR_7g020980 | 50.000 | 64 | 32 | 0 | 50 | 113 | 47 | 110 | 1.60e-15 | 72.0 |
MS.gene30842.t1 | MTR_1g087920 | 37.273 | 110 | 57 | 2 | 4 | 111 | 35 | 134 | 1.73e-15 | 73.9 |
MS.gene30842.t1 | MTR_1g014800 | 39.785 | 93 | 49 | 1 | 53 | 138 | 30 | 122 | 2.58e-15 | 72.0 |
MS.gene30842.t1 | MTR_7g021010 | 42.697 | 89 | 50 | 1 | 45 | 132 | 41 | 129 | 2.66e-15 | 71.2 |
MS.gene30842.t1 | MTR_1g019110 | 51.613 | 62 | 30 | 0 | 54 | 115 | 44 | 105 | 2.85e-15 | 71.2 |
MS.gene30842.t1 | MTR_1g028560 | 43.902 | 82 | 41 | 1 | 54 | 135 | 115 | 191 | 2.89e-15 | 73.6 |
MS.gene30842.t1 | MTR_4g086190 | 36.066 | 122 | 69 | 2 | 54 | 173 | 96 | 210 | 3.16e-15 | 72.0 |
MS.gene30842.t1 | MTR_3g105480 | 50.000 | 68 | 34 | 0 | 56 | 123 | 33 | 100 | 4.28e-15 | 71.6 |
MS.gene30842.t1 | MTR_8g092460 | 53.333 | 60 | 28 | 0 | 54 | 113 | 145 | 204 | 5.14e-15 | 72.8 |
MS.gene30842.t1 | MTR_5g083330 | 50.685 | 73 | 36 | 0 | 39 | 111 | 20 | 92 | 7.74e-15 | 72.0 |
MS.gene30842.t1 | MTR_4g086220 | 58.929 | 56 | 23 | 0 | 54 | 109 | 96 | 151 | 8.17e-15 | 71.2 |
MS.gene30842.t1 | MTR_2g089170 | 60.714 | 56 | 22 | 0 | 54 | 109 | 65 | 120 | 9.71e-15 | 70.1 |
MS.gene30842.t1 | MTR_3g053690 | 55.385 | 65 | 26 | 1 | 45 | 109 | 21 | 82 | 1.39e-14 | 70.5 |
MS.gene30842.t1 | MTR_7g028925 | 53.333 | 60 | 25 | 1 | 53 | 112 | 28 | 84 | 1.81e-14 | 67.0 |
MS.gene30842.t1 | MTR_4g086160 | 57.143 | 56 | 24 | 0 | 54 | 109 | 96 | 151 | 2.25e-14 | 69.7 |
MS.gene30842.t1 | MTR_5g016750 | 53.448 | 58 | 27 | 0 | 54 | 111 | 25 | 82 | 2.43e-14 | 68.9 |
MS.gene30842.t1 | MTR_2g078680 | 48.684 | 76 | 36 | 1 | 34 | 109 | 14 | 86 | 2.67e-14 | 69.3 |
MS.gene30842.t1 | MTR_0939s0010 | 58.929 | 56 | 23 | 0 | 54 | 109 | 65 | 120 | 3.21e-14 | 68.9 |
MS.gene30842.t1 | MTR_4g086165 | 57.143 | 56 | 24 | 0 | 54 | 109 | 82 | 137 | 3.31e-14 | 68.9 |
MS.gene30842.t1 | MTR_8g022820 | 41.772 | 79 | 43 | 1 | 47 | 125 | 117 | 192 | 3.46e-14 | 70.9 |
MS.gene30842.t1 | MTR_8g022820 | 41.772 | 79 | 43 | 1 | 47 | 125 | 117 | 192 | 3.46e-14 | 70.9 |
MS.gene30842.t1 | MTR_8g022820 | 41.772 | 79 | 43 | 1 | 47 | 125 | 116 | 191 | 3.48e-14 | 70.9 |
MS.gene30842.t1 | MTR_4g114570 | 50.725 | 69 | 27 | 1 | 54 | 122 | 7 | 68 | 4.41e-14 | 68.6 |
MS.gene30842.t1 | MTR_5g082950 | 58.929 | 56 | 23 | 0 | 54 | 109 | 66 | 121 | 4.80e-14 | 70.1 |
MS.gene30842.t1 | MTR_4g010640 | 55.357 | 56 | 25 | 0 | 54 | 109 | 7 | 62 | 9.32e-14 | 67.8 |
MS.gene30842.t1 | MTR_7g092190 | 57.143 | 56 | 24 | 0 | 54 | 109 | 30 | 85 | 1.01e-13 | 68.9 |
MS.gene30842.t1 | MTR_3g106290 | 58.929 | 56 | 23 | 0 | 54 | 109 | 8 | 63 | 1.22e-13 | 67.0 |
MS.gene30842.t1 | MTR_1g074310 | 51.613 | 62 | 29 | 1 | 54 | 114 | 21 | 82 | 1.29e-13 | 65.9 |
MS.gene30842.t1 | MTR_3g090760 | 32.544 | 169 | 100 | 4 | 28 | 191 | 96 | 255 | 1.36e-13 | 68.9 |
MS.gene30842.t1 | MTR_2g103700 | 51.667 | 60 | 29 | 0 | 54 | 113 | 7 | 66 | 1.45e-13 | 66.6 |
MS.gene30842.t1 | MTR_4g008860 | 58.929 | 56 | 23 | 0 | 54 | 109 | 8 | 63 | 1.66e-13 | 66.6 |
MS.gene30842.t1 | MTR_5g009620 | 40.000 | 115 | 46 | 4 | 41 | 149 | 97 | 194 | 2.01e-13 | 68.2 |
MS.gene30842.t1 | MTR_1g048610 | 56.140 | 57 | 24 | 1 | 54 | 109 | 89 | 145 | 2.06e-13 | 67.0 |
MS.gene30842.t1 | MTR_2g438180 | 53.226 | 62 | 28 | 1 | 54 | 114 | 14 | 75 | 2.49e-13 | 65.1 |
MS.gene30842.t1 | MTR_4g078710 | 40.230 | 87 | 44 | 1 | 54 | 140 | 28 | 106 | 2.53e-13 | 66.6 |
MS.gene30842.t1 | MTR_4g100450 | 42.353 | 85 | 48 | 1 | 30 | 113 | 130 | 214 | 5.23e-13 | 67.0 |
MS.gene30842.t1 | MTR_2g015050 | 54.386 | 57 | 25 | 1 | 54 | 109 | 134 | 190 | 5.38e-13 | 66.6 |
MS.gene30842.t1 | MTR_1g070070 | 54.386 | 57 | 25 | 1 | 54 | 109 | 21 | 77 | 5.65e-13 | 64.3 |
MS.gene30842.t1 | MTR_8g099215 | 45.000 | 80 | 38 | 1 | 36 | 109 | 83 | 162 | 6.48e-13 | 66.6 |
MS.gene30842.t1 | MTR_2g014340 | 53.571 | 56 | 26 | 0 | 54 | 109 | 19 | 74 | 6.58e-13 | 65.5 |
MS.gene30842.t1 | MTR_4g100420 | 52.239 | 67 | 29 | 2 | 48 | 113 | 153 | 217 | 1.12e-12 | 65.9 |
MS.gene30842.t1 | MTR_2g043040 | 50.847 | 59 | 29 | 0 | 53 | 111 | 18 | 76 | 1.39e-12 | 65.1 |
MS.gene30842.t1 | MTR_1g074230 | 56.140 | 57 | 24 | 1 | 54 | 109 | 19 | 75 | 1.92e-12 | 62.8 |
MS.gene30842.t1 | MTR_4g054360 | 34.559 | 136 | 70 | 4 | 4 | 138 | 82 | 199 | 2.02e-12 | 65.1 |
MS.gene30842.t1 | MTR_5g085100 | 40.816 | 98 | 47 | 3 | 23 | 119 | 17 | 104 | 2.86e-12 | 64.7 |
MS.gene30842.t1 | MTR_2g014300 | 55.357 | 56 | 25 | 0 | 54 | 109 | 15 | 70 | 3.28e-12 | 62.8 |
MS.gene30842.t1 | MTR_4g054740 | 37.500 | 96 | 53 | 2 | 46 | 140 | 89 | 178 | 4.06e-12 | 63.5 |
MS.gene30842.t1 | MTR_8g069360 | 51.786 | 56 | 27 | 0 | 54 | 109 | 44 | 99 | 4.50e-12 | 64.7 |
MS.gene30842.t1 | MTR_7g085810 | 29.012 | 162 | 96 | 4 | 54 | 197 | 30 | 190 | 4.61e-12 | 63.9 |
MS.gene30842.t1 | MTR_1g090290 | 51.613 | 62 | 27 | 2 | 49 | 109 | 110 | 169 | 7.07e-12 | 62.4 |
MS.gene30842.t1 | MTR_2g019750 | 33.065 | 124 | 74 | 2 | 39 | 162 | 37 | 151 | 9.52e-12 | 63.2 |
MS.gene30842.t1 | MTR_2g043020 | 50.877 | 57 | 28 | 0 | 53 | 109 | 18 | 74 | 1.00e-11 | 62.0 |
MS.gene30842.t1 | MTR_2g016730 | 50.847 | 59 | 29 | 0 | 51 | 109 | 20 | 78 | 1.05e-11 | 63.5 |
MS.gene30842.t1 | MTR_5g008540 | 47.541 | 61 | 32 | 0 | 56 | 116 | 26 | 86 | 1.17e-11 | 59.3 |
MS.gene30842.t1 | MTR_5g032820 | 53.571 | 56 | 26 | 0 | 54 | 109 | 46 | 101 | 1.36e-11 | 63.2 |
MS.gene30842.t1 | MTR_4g088005 | 48.438 | 64 | 32 | 1 | 47 | 109 | 50 | 113 | 1.77e-11 | 59.7 |
MS.gene30842.t1 | MTR_4g111915 | 45.763 | 59 | 32 | 0 | 54 | 112 | 53 | 111 | 2.40e-11 | 59.7 |
MS.gene30842.t1 | MTR_5g085070 | 47.945 | 73 | 28 | 2 | 47 | 119 | 47 | 109 | 3.54e-11 | 61.6 |
MS.gene30842.t1 | MTR_1g074250 | 46.875 | 64 | 32 | 1 | 51 | 112 | 16 | 79 | 3.68e-11 | 58.9 |
MS.gene30842.t1 | MTR_5g008790 | 48.333 | 60 | 29 | 1 | 54 | 111 | 18 | 77 | 4.48e-11 | 59.7 |
MS.gene30842.t1 | MTR_4g054860 | 43.662 | 71 | 39 | 1 | 46 | 115 | 123 | 193 | 4.83e-11 | 61.2 |
MS.gene30842.t1 | MTR_5g075570 | 46.667 | 60 | 32 | 0 | 50 | 109 | 120 | 179 | 5.23e-11 | 61.2 |
MS.gene30842.t1 | MTR_4g119270 | 44.444 | 72 | 37 | 1 | 38 | 109 | 40 | 108 | 6.02e-11 | 61.2 |
MS.gene30842.t1 | MTR_8g032610 | 48.333 | 60 | 31 | 0 | 54 | 113 | 27 | 86 | 6.52e-11 | 60.8 |
MS.gene30842.t1 | MTR_4g112490 | 45.763 | 59 | 32 | 0 | 54 | 112 | 53 | 111 | 8.20e-11 | 59.7 |
MS.gene30842.t1 | MTR_8g006840 | 50.877 | 57 | 27 | 1 | 54 | 109 | 125 | 181 | 9.12e-11 | 59.3 |
MS.gene30842.t1 | MTR_3g095190 | 52.055 | 73 | 34 | 1 | 54 | 125 | 170 | 242 | 9.69e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30842.t1 | AT4G25470 | 54.726 | 201 | 71 | 5 | 27 | 215 | 24 | 216 | 5.29e-62 | 192 |
MS.gene30842.t1 | AT4G25480 | 52.752 | 218 | 88 | 6 | 7 | 215 | 5 | 216 | 3.26e-59 | 186 |
MS.gene30842.t1 | AT5G51990 | 45.614 | 228 | 82 | 6 | 21 | 215 | 4 | 222 | 6.52e-58 | 182 |
MS.gene30842.t1 | AT1G63030 | 47.938 | 194 | 81 | 4 | 27 | 215 | 3 | 181 | 1.15e-54 | 172 |
MS.gene30842.t1 | AT1G63030 | 47.938 | 194 | 81 | 4 | 27 | 215 | 3 | 181 | 1.15e-54 | 172 |
MS.gene30842.t1 | AT4G25490 | 52.850 | 193 | 77 | 4 | 32 | 215 | 26 | 213 | 2.95e-54 | 173 |
MS.gene30842.t1 | AT1G12610 | 49.419 | 172 | 75 | 2 | 27 | 198 | 3 | 162 | 3.70e-54 | 172 |
MS.gene30842.t1 | AT5G25810 | 49.593 | 123 | 55 | 1 | 13 | 135 | 2 | 117 | 2.21e-32 | 117 |
MS.gene30842.t1 | AT5G11590 | 51.754 | 114 | 51 | 1 | 25 | 134 | 18 | 131 | 7.58e-31 | 113 |
MS.gene30842.t1 | AT2G44940 | 59.783 | 92 | 37 | 0 | 43 | 134 | 89 | 180 | 1.50e-30 | 114 |
MS.gene30842.t1 | AT4G32800 | 60.000 | 85 | 34 | 0 | 50 | 134 | 15 | 99 | 3.76e-30 | 111 |
MS.gene30842.t1 | AT3G16280 | 63.291 | 79 | 29 | 0 | 50 | 128 | 57 | 135 | 1.05e-28 | 108 |
MS.gene30842.t1 | AT3G16280 | 63.291 | 79 | 29 | 0 | 50 | 128 | 75 | 153 | 1.52e-28 | 108 |
MS.gene30842.t1 | AT1G01250 | 60.000 | 80 | 32 | 0 | 49 | 128 | 40 | 119 | 1.66e-28 | 106 |
MS.gene30842.t1 | AT2G35700 | 60.000 | 80 | 32 | 0 | 49 | 128 | 40 | 119 | 3.28e-28 | 105 |
MS.gene30842.t1 | AT4G16750 | 56.790 | 81 | 35 | 0 | 49 | 129 | 35 | 115 | 5.71e-27 | 102 |
MS.gene30842.t1 | AT2G36450 | 39.888 | 178 | 90 | 6 | 50 | 215 | 11 | 183 | 7.06e-27 | 102 |
MS.gene30842.t1 | AT3G60490 | 53.846 | 91 | 41 | 1 | 39 | 128 | 55 | 145 | 6.84e-26 | 101 |
MS.gene30842.t1 | AT2G25820 | 60.526 | 76 | 30 | 0 | 53 | 128 | 25 | 100 | 7.61e-25 | 97.8 |
MS.gene30842.t1 | AT1G71450 | 54.945 | 91 | 41 | 0 | 53 | 143 | 23 | 113 | 6.90e-24 | 94.0 |
MS.gene30842.t1 | AT5G52020 | 37.714 | 175 | 96 | 5 | 50 | 215 | 61 | 231 | 4.97e-20 | 85.1 |
MS.gene30842.t1 | AT2G47520 | 43.878 | 98 | 51 | 1 | 15 | 112 | 15 | 108 | 6.61e-20 | 83.2 |
MS.gene30842.t1 | AT5G21960 | 30.660 | 212 | 99 | 6 | 52 | 215 | 5 | 216 | 3.11e-19 | 82.8 |
MS.gene30842.t1 | AT4G13620 | 51.282 | 78 | 37 | 1 | 35 | 111 | 212 | 289 | 6.11e-19 | 84.3 |
MS.gene30842.t1 | AT1G19210 | 31.319 | 182 | 97 | 5 | 54 | 215 | 12 | 185 | 6.93e-19 | 80.9 |
MS.gene30842.t1 | AT1G77200 | 58.442 | 77 | 32 | 0 | 52 | 128 | 41 | 117 | 1.65e-18 | 81.3 |
MS.gene30842.t1 | AT1G33760 | 52.874 | 87 | 41 | 0 | 54 | 140 | 20 | 106 | 7.07e-18 | 78.2 |
MS.gene30842.t1 | AT5G47230 | 35.503 | 169 | 97 | 5 | 30 | 193 | 133 | 294 | 9.00e-18 | 80.1 |
MS.gene30842.t1 | AT2G22200 | 38.017 | 121 | 65 | 2 | 53 | 173 | 70 | 180 | 9.37e-18 | 79.7 |
MS.gene30842.t1 | AT1G22190 | 53.425 | 73 | 32 | 1 | 39 | 111 | 70 | 140 | 1.08e-17 | 79.3 |
MS.gene30842.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 49 | 111 | 27 | 88 | 1.83e-17 | 76.3 |
MS.gene30842.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 49 | 111 | 27 | 88 | 1.85e-17 | 76.6 |
MS.gene30842.t1 | AT1G46768 | 57.143 | 63 | 26 | 1 | 49 | 111 | 27 | 88 | 1.85e-17 | 76.6 |
MS.gene30842.t1 | AT4G39780 | 57.377 | 61 | 26 | 0 | 49 | 109 | 88 | 148 | 2.49e-17 | 78.6 |
MS.gene30842.t1 | AT3G16770 | 51.282 | 78 | 31 | 1 | 34 | 111 | 66 | 136 | 5.75e-17 | 77.4 |
MS.gene30842.t1 | AT4G06746 | 53.226 | 62 | 29 | 0 | 54 | 115 | 36 | 97 | 8.34e-17 | 74.7 |
MS.gene30842.t1 | AT2G20880 | 31.792 | 173 | 108 | 3 | 30 | 202 | 165 | 327 | 8.37e-17 | 77.8 |
MS.gene30842.t1 | AT1G21910 | 57.627 | 59 | 25 | 0 | 54 | 112 | 50 | 108 | 9.28e-17 | 76.3 |
MS.gene30842.t1 | AT3G11020 | 58.730 | 63 | 26 | 0 | 51 | 113 | 75 | 137 | 9.83e-17 | 77.8 |
MS.gene30842.t1 | AT1G12630 | 39.205 | 176 | 86 | 5 | 50 | 205 | 15 | 189 | 1.47e-16 | 75.1 |
MS.gene30842.t1 | AT1G22810 | 34.286 | 140 | 55 | 4 | 54 | 176 | 14 | 133 | 5.26e-16 | 72.4 |
MS.gene30842.t1 | AT4G28140 | 32.895 | 152 | 77 | 5 | 36 | 181 | 120 | 252 | 6.16e-16 | 75.1 |
MS.gene30842.t1 | AT5G65130 | 45.455 | 99 | 40 | 3 | 28 | 113 | 73 | 170 | 6.21e-16 | 74.7 |
MS.gene30842.t1 | AT1G78080 | 57.627 | 59 | 25 | 0 | 53 | 111 | 151 | 209 | 6.26e-16 | 75.5 |
MS.gene30842.t1 | AT5G65130 | 45.455 | 99 | 40 | 3 | 28 | 113 | 75 | 172 | 6.48e-16 | 74.7 |
MS.gene30842.t1 | AT2G33710 | 48.101 | 79 | 36 | 1 | 49 | 122 | 65 | 143 | 8.26e-16 | 73.6 |
MS.gene30842.t1 | AT2G33710 | 48.101 | 79 | 36 | 1 | 49 | 122 | 65 | 143 | 1.37e-15 | 73.2 |
MS.gene30842.t1 | AT1G74930 | 42.500 | 80 | 46 | 0 | 54 | 133 | 21 | 100 | 1.49e-15 | 72.4 |
MS.gene30842.t1 | AT3G50260 | 42.857 | 91 | 43 | 2 | 47 | 133 | 14 | 99 | 2.45e-15 | 70.9 |
MS.gene30842.t1 | AT5G05410 | 59.322 | 59 | 24 | 0 | 54 | 112 | 79 | 137 | 2.55e-15 | 73.6 |
MS.gene30842.t1 | AT1G36060 | 59.649 | 57 | 23 | 0 | 53 | 109 | 142 | 198 | 2.88e-15 | 73.6 |
MS.gene30842.t1 | AT1G71520 | 43.299 | 97 | 46 | 3 | 48 | 138 | 8 | 101 | 3.24e-15 | 70.1 |
MS.gene30842.t1 | AT5G05410 | 59.322 | 59 | 24 | 0 | 54 | 112 | 79 | 137 | 3.56e-15 | 73.6 |
MS.gene30842.t1 | AT4G36900 | 53.333 | 60 | 28 | 0 | 50 | 109 | 26 | 85 | 4.03e-15 | 71.2 |
MS.gene30842.t1 | AT2G23340 | 49.231 | 65 | 33 | 0 | 54 | 118 | 28 | 92 | 8.27e-15 | 70.1 |
MS.gene30842.t1 | AT5G67190 | 51.724 | 58 | 28 | 0 | 54 | 111 | 21 | 78 | 8.60e-15 | 70.1 |
MS.gene30842.t1 | AT5G13330 | 51.562 | 64 | 29 | 1 | 50 | 113 | 37 | 98 | 2.00e-14 | 69.7 |
MS.gene30842.t1 | AT5G61890 | 51.562 | 64 | 29 | 1 | 50 | 113 | 88 | 149 | 2.51e-14 | 70.1 |
MS.gene30842.t1 | AT5G07580 | 49.367 | 79 | 37 | 2 | 48 | 125 | 106 | 182 | 2.84e-14 | 69.3 |
MS.gene30842.t1 | AT1G15360 | 57.143 | 56 | 24 | 0 | 54 | 109 | 7 | 62 | 2.99e-14 | 68.9 |
MS.gene30842.t1 | AT1G15360 | 57.143 | 56 | 24 | 0 | 54 | 109 | 7 | 62 | 2.99e-14 | 68.9 |
MS.gene30842.t1 | AT5G44210 | 48.571 | 70 | 29 | 1 | 54 | 123 | 33 | 95 | 3.62e-14 | 68.9 |
MS.gene30842.t1 | AT3G15210 | 55.556 | 63 | 25 | 1 | 47 | 109 | 21 | 80 | 4.90e-14 | 68.9 |
MS.gene30842.t1 | AT4G31060 | 45.122 | 82 | 42 | 2 | 54 | 132 | 27 | 108 | 5.18e-14 | 68.2 |
MS.gene30842.t1 | AT1G75490 | 50.000 | 70 | 35 | 0 | 53 | 122 | 41 | 110 | 5.71e-14 | 68.2 |
MS.gene30842.t1 | AT5G61600 | 59.016 | 61 | 22 | 2 | 50 | 109 | 86 | 144 | 6.96e-14 | 68.6 |
MS.gene30842.t1 | AT4G17490 | 47.126 | 87 | 41 | 3 | 30 | 113 | 113 | 197 | 7.52e-14 | 69.3 |
MS.gene30842.t1 | AT3G57600 | 34.906 | 106 | 68 | 1 | 54 | 159 | 28 | 132 | 8.42e-14 | 68.9 |
MS.gene30842.t1 | AT4G11140 | 45.205 | 73 | 34 | 1 | 54 | 126 | 87 | 153 | 8.77e-14 | 68.9 |
MS.gene30842.t1 | AT1G72360 | 36.937 | 111 | 61 | 1 | 22 | 132 | 42 | 143 | 1.30e-13 | 68.2 |
MS.gene30842.t1 | AT4G27950 | 54.386 | 57 | 26 | 0 | 54 | 110 | 118 | 174 | 1.32e-13 | 68.9 |
MS.gene30842.t1 | AT3G61630 | 46.667 | 75 | 34 | 1 | 54 | 128 | 105 | 173 | 1.70e-13 | 68.6 |
MS.gene30842.t1 | AT1G72360 | 41.860 | 86 | 41 | 1 | 47 | 132 | 18 | 94 | 1.87e-13 | 67.0 |
MS.gene30842.t1 | AT5G25390 | 53.571 | 56 | 26 | 0 | 54 | 109 | 7 | 62 | 2.03e-13 | 66.6 |
MS.gene30842.t1 | AT5G51190 | 55.556 | 63 | 25 | 2 | 48 | 109 | 68 | 128 | 2.23e-13 | 67.0 |
MS.gene30842.t1 | AT5G43410 | 47.887 | 71 | 34 | 2 | 40 | 109 | 3 | 71 | 3.13e-13 | 64.7 |
MS.gene30842.t1 | AT1G72360 | 41.860 | 86 | 41 | 1 | 47 | 132 | 69 | 145 | 4.47e-13 | 66.6 |
MS.gene30842.t1 | AT5G53290 | 43.836 | 73 | 41 | 0 | 38 | 110 | 109 | 181 | 5.46e-13 | 67.4 |
MS.gene30842.t1 | AT5G25190 | 57.143 | 56 | 24 | 0 | 54 | 109 | 8 | 63 | 7.17e-13 | 64.7 |
MS.gene30842.t1 | AT3G23230 | 50.000 | 62 | 30 | 1 | 54 | 114 | 20 | 81 | 9.59e-13 | 63.5 |
MS.gene30842.t1 | AT1G12890 | 44.872 | 78 | 40 | 1 | 32 | 109 | 2 | 76 | 1.06e-12 | 65.1 |
MS.gene30842.t1 | AT2G40340 | 40.659 | 91 | 53 | 1 | 54 | 143 | 14 | 104 | 1.46e-12 | 65.5 |
MS.gene30842.t1 | AT2G40340 | 40.659 | 91 | 53 | 1 | 54 | 143 | 14 | 104 | 1.46e-12 | 65.5 |
MS.gene30842.t1 | AT2G40340 | 40.659 | 91 | 53 | 1 | 54 | 143 | 14 | 104 | 1.46e-12 | 65.5 |
MS.gene30842.t1 | AT5G18450 | 56.140 | 57 | 25 | 0 | 53 | 109 | 33 | 89 | 1.47e-12 | 65.9 |
MS.gene30842.t1 | AT2G46310 | 35.455 | 110 | 51 | 3 | 54 | 163 | 99 | 188 | 1.88e-12 | 65.5 |
MS.gene30842.t1 | AT3G20310 | 52.459 | 61 | 29 | 0 | 49 | 109 | 22 | 82 | 2.28e-12 | 64.7 |
MS.gene30842.t1 | AT1G03800 | 47.059 | 68 | 33 | 1 | 42 | 109 | 44 | 108 | 2.58e-12 | 64.3 |
MS.gene30842.t1 | AT2G40340 | 40.659 | 91 | 53 | 1 | 54 | 143 | 79 | 169 | 4.09e-12 | 64.7 |
MS.gene30842.t1 | AT2G40340 | 51.724 | 58 | 28 | 0 | 54 | 111 | 72 | 129 | 4.21e-12 | 64.3 |
MS.gene30842.t1 | AT2G40340 | 40.659 | 91 | 53 | 1 | 54 | 143 | 72 | 162 | 4.88e-12 | 64.3 |
MS.gene30842.t1 | AT5G64750 | 40.230 | 87 | 50 | 2 | 64 | 149 | 195 | 280 | 5.77e-12 | 64.3 |
MS.gene30842.t1 | AT1G28370 | 51.786 | 56 | 27 | 0 | 54 | 109 | 20 | 75 | 7.13e-12 | 62.0 |
MS.gene30842.t1 | AT1G28360 | 51.667 | 60 | 29 | 0 | 54 | 113 | 12 | 71 | 7.17e-12 | 62.4 |
MS.gene30842.t1 | AT5G19790 | 51.724 | 58 | 28 | 0 | 54 | 111 | 22 | 79 | 8.75e-12 | 63.2 |
MS.gene30842.t1 | AT1G28370 | 51.786 | 56 | 27 | 0 | 54 | 109 | 58 | 113 | 9.64e-12 | 62.4 |
MS.gene30842.t1 | AT5G47220 | 52.632 | 57 | 26 | 1 | 54 | 109 | 117 | 173 | 1.89e-11 | 62.0 |
MS.gene30842.t1 | AT4G23750 | 49.123 | 57 | 29 | 0 | 54 | 110 | 122 | 178 | 2.07e-11 | 62.8 |
MS.gene30842.t1 | AT4G23750 | 49.123 | 57 | 29 | 0 | 54 | 110 | 122 | 178 | 2.07e-11 | 62.8 |
MS.gene30842.t1 | AT1G24590 | 47.143 | 70 | 32 | 1 | 54 | 123 | 58 | 122 | 2.47e-11 | 62.4 |
MS.gene30842.t1 | AT1G50640 | 52.381 | 63 | 27 | 1 | 47 | 109 | 24 | 83 | 2.99e-11 | 61.2 |
MS.gene30842.t1 | AT1G12980 | 53.571 | 56 | 26 | 0 | 54 | 109 | 57 | 112 | 3.16e-11 | 62.0 |
MS.gene30842.t1 | AT5G13910 | 44.595 | 74 | 37 | 1 | 54 | 127 | 20 | 89 | 3.87e-11 | 60.8 |
MS.gene30842.t1 | AT5G18560 | 45.070 | 71 | 38 | 1 | 39 | 109 | 41 | 110 | 5.24e-11 | 61.6 |
Find 61 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCTCCCTGCTCTCTTCTT+CGG | 0.270452 | 6.2:-58793581 | None:intergenic |
TCCTCCCTGCTCTCTTCTTC+GGG | 0.299122 | 6.2:-58793580 | None:intergenic |
ATGGGCTCGGGCTGCCATAT+CGG | 0.344047 | 6.2:-58793729 | None:intergenic |
AGCTATGCGTAGGGGACATT+AGG | 0.349071 | 6.2:-58794021 | None:intergenic |
TTCCTACTATAACTCATTAC+CGG | 0.377606 | 6.2:+58793529 | MS.gene30842:CDS |
TGAGGAAATGGAGTGTGAAT+AGG | 0.393355 | 6.2:-58793495 | None:intergenic |
GTCTGAGTTGTGGAGGAATA+TGG | 0.404875 | 6.2:+58793997 | MS.gene30842:CDS |
AAAGATATTCAGCTCCTTTG+TGG | 0.404977 | 6.2:-58793942 | None:intergenic |
ATCGAGGAAGTTGCTGGAAT+AGG | 0.421748 | 6.2:-58793821 | None:intergenic |
GGAAGAGGAACTTAGACAAA+TGG | 0.425545 | 6.2:+58793645 | MS.gene30842:CDS |
CTATAACTCATTACCGGATT+CGG | 0.428938 | 6.2:+58793535 | MS.gene30842:CDS |
TTGCAGCAACATCATGGGCT+CGG | 0.431723 | 6.2:-58793742 | None:intergenic |
TGTCCCCTACGCATAGCTTT+GGG | 0.437452 | 6.2:+58794026 | MS.gene30842:CDS |
ATTCTCTGGTCTTAAAGCTT+CGG | 0.442303 | 6.2:-58793876 | None:intergenic |
GCTATGCGTAGGGGACATTA+GGG | 0.449422 | 6.2:-58794020 | None:intergenic |
CATATCCTAGTCTTCGTGTT+GGG | 0.459434 | 6.2:-58793686 | None:intergenic |
CGGGCTGCCATATCGGCTGT+TGG | 0.466848 | 6.2:-58793722 | None:intergenic |
AGCTACAACAGTCTCAATAT+CGG | 0.471917 | 6.2:-58793912 | None:intergenic |
CCAACACGAAGACTAGGATA+TGG | 0.472745 | 6.2:+58793687 | MS.gene30842:CDS |
ATGTCCCCTACGCATAGCTT+TGG | 0.484533 | 6.2:+58794025 | MS.gene30842:CDS |
TGCAGCAACATCATGGGCTC+GGG | 0.490501 | 6.2:-58793741 | None:intergenic |
ATGCCATTGCAGCAACATCA+TGG | 0.498125 | 6.2:-58793748 | None:intergenic |
ACTCGCCACCCGGTGTATAG+AGG | 0.498536 | 6.2:+58793617 | MS.gene30842:CDS |
CTCGATAAAAGATATTCAAA+AGG | 0.509288 | 6.2:+58793838 | MS.gene30842:CDS |
CTACGCCTGTCTCAATTTCG+CGG | 0.511934 | 6.2:+58793781 | MS.gene30842:CDS |
GTAATCATTATAGTATTCTC+TGG | 0.514764 | 6.2:-58793890 | None:intergenic |
CTCTGGTCTTAAAGCTTCGG+TGG | 0.522074 | 6.2:-58793873 | None:intergenic |
GAAGAGGAACTTAGACAAAT+GGG | 0.523345 | 6.2:+58793646 | MS.gene30842:CDS |
AGTAACCCGAAGAAGAGAGC+AGG | 0.528959 | 6.2:+58793575 | MS.gene30842:CDS |
GCTAATCGTATCTCCGAATC+CGG | 0.532911 | 6.2:-58793548 | None:intergenic |
TGTTGCTGCAATGGCATTGA+GGG | 0.537002 | 6.2:+58793754 | MS.gene30842:CDS |
TGTATAGAGGTGTTAGGAAG+AGG | 0.541975 | 6.2:+58793630 | MS.gene30842:CDS |
ACCCGGTGTATAGAGGTGTT+AGG | 0.542359 | 6.2:+58793624 | MS.gene30842:CDS |
TGCCATTGCAGCAACATCAT+GGG | 0.543909 | 6.2:-58793747 | None:intergenic |
ATCCGGTAATGAGTTATAGT+AGG | 0.553057 | 6.2:-58793531 | None:intergenic |
AGCCCATGATGTTGCTGCAA+TGG | 0.555409 | 6.2:+58793745 | MS.gene30842:CDS |
GGGAGCCCAACACGAAGACT+AGG | 0.562532 | 6.2:+58793681 | MS.gene30842:CDS |
CCATATCCTAGTCTTCGTGT+TGG | 0.566274 | 6.2:-58793687 | None:intergenic |
AGCAGGGAGGAAGATATTCA+AGG | 0.572499 | 6.2:+58793592 | MS.gene30842:CDS |
CAAATGGGTGTGTGAAATGA+GGG | 0.573881 | 6.2:+58793661 | MS.gene30842:CDS |
TCATACCCAAAGCTATGCGT+AGG | 0.583004 | 6.2:-58794031 | None:intergenic |
ACAAATGGGTGTGTGAAATG+AGG | 0.584388 | 6.2:+58793660 | MS.gene30842:CDS |
CATACCCAAAGCTATGCGTA+GGG | 0.586017 | 6.2:-58794030 | None:intergenic |
TCCTAACACCTCTATACACC+GGG | 0.586398 | 6.2:-58793625 | None:intergenic |
ATGTTGCTGCAATGGCATTG+AGG | 0.588097 | 6.2:+58793753 | MS.gene30842:CDS |
TGAGTCCGCGAAATTGAGAC+AGG | 0.588168 | 6.2:-58793786 | None:intergenic |
TTCCTAACACCTCTATACAC+CGG | 0.602821 | 6.2:-58793626 | None:intergenic |
ATTCAAGGAAACTCGCCACC+CGG | 0.604485 | 6.2:+58793607 | MS.gene30842:CDS |
TGTTAAATATGTCTGAGTTG+TGG | 0.612225 | 6.2:+58793987 | MS.gene30842:CDS |
ACGAAGACTAGGATATGGCT+AGG | 0.620318 | 6.2:+58793692 | MS.gene30842:CDS |
GTAACCCGAAGAAGAGAGCA+GGG | 0.625383 | 6.2:+58793576 | MS.gene30842:CDS |
AAGATGATGAGGTATCACTC+TGG | 0.642662 | 6.2:+58794089 | MS.gene30842:CDS |
TCAATTTCGCGGACTCAGTG+TGG | 0.672252 | 6.2:+58793792 | MS.gene30842:CDS |
GGATTCGGAGATACGATTAG+CGG | 0.674411 | 6.2:+58793550 | MS.gene30842:CDS |
TAAATATGTCTGAGTTGTGG+AGG | 0.678753 | 6.2:+58793990 | MS.gene30842:CDS |
TGTAGCTATCGTCGCCACAA+AGG | 0.698575 | 6.2:+58793928 | MS.gene30842:CDS |
ACCCGAAGAAGAGAGCAGGG+AGG | 0.701611 | 6.2:+58793579 | MS.gene30842:CDS |
ATTTCGCGGACTCAGTGTGG+CGG | 0.705241 | 6.2:+58793795 | MS.gene30842:CDS |
GTTGCTGCAATGGCATTGAG+GGG | 0.718595 | 6.2:+58793755 | MS.gene30842:CDS |
ATACCCAAAGCTATGCGTAG+GGG | 0.718683 | 6.2:-58794029 | None:intergenic |
TAACACCTCTATACACCGGG+TGG | 0.755465 | 6.2:-58793622 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | CTCGATAAAAGATATTCAAA+AGG | + | chr6.2:58793838-58793857 | MS.gene30842:CDS | 25.0% |
! | GTAATCATTATAGTATTCTC+TGG | - | chr6.2:58793893-58793912 | None:intergenic | 25.0% |
!! | CTTTTGAATATCTTTTATCG+AGG | - | chr6.2:58793840-58793859 | None:intergenic | 25.0% |
TGTTAAATATGTCTGAGTTG+TGG | + | chr6.2:58793987-58794006 | MS.gene30842:CDS | 30.0% | |
TTCCTACTATAACTCATTAC+CGG | + | chr6.2:58793529-58793548 | MS.gene30842:CDS | 30.0% | |
!! | ACAAGATTTTCAAGATGATG+AGG | + | chr6.2:58794078-58794097 | MS.gene30842:CDS | 30.0% |
AAAGATATTCAGCTCCTTTG+TGG | - | chr6.2:58793945-58793964 | None:intergenic | 35.0% | |
AGCTACAACAGTCTCAATAT+CGG | - | chr6.2:58793915-58793934 | None:intergenic | 35.0% | |
ATCCGGTAATGAGTTATAGT+AGG | - | chr6.2:58793534-58793553 | None:intergenic | 35.0% | |
CTATAACTCATTACCGGATT+CGG | + | chr6.2:58793535-58793554 | MS.gene30842:CDS | 35.0% | |
GAAGAGGAACTTAGACAAAT+GGG | + | chr6.2:58793646-58793665 | MS.gene30842:CDS | 35.0% | |
TAAATATGTCTGAGTTGTGG+AGG | + | chr6.2:58793990-58794009 | MS.gene30842:CDS | 35.0% | |
! | AAGGAGCTGAATATCTTTTG+TGG | + | chr6.2:58793947-58793966 | MS.gene30842:CDS | 35.0% |
! | AGGAGCTGAATATCTTTTGT+GGG | + | chr6.2:58793948-58793967 | MS.gene30842:CDS | 35.0% |
!! | AGAAGATGCTTTTGAGGAAA+TGG | - | chr6.2:58793510-58793529 | None:intergenic | 35.0% |
!! | ATTCTCTGGTCTTAAAGCTT+CGG | - | chr6.2:58793879-58793898 | None:intergenic | 35.0% |
ACAAATGGGTGTGTGAAATG+AGG | + | chr6.2:58793660-58793679 | MS.gene30842:CDS | 40.0% | |
CAAATGGGTGTGTGAAATGA+GGG | + | chr6.2:58793661-58793680 | MS.gene30842:CDS | 40.0% | |
GGAAGAGGAACTTAGACAAA+TGG | + | chr6.2:58793645-58793664 | MS.gene30842:CDS | 40.0% | |
TGAGGAAATGGAGTGTGAAT+AGG | - | chr6.2:58793498-58793517 | None:intergenic | 40.0% | |
TTCCTAACACCTCTATACAC+CGG | - | chr6.2:58793629-58793648 | None:intergenic | 40.0% | |
! | AACTTTTCCAACAGCCGATA+TGG | + | chr6.2:58793715-58793734 | MS.gene30842:CDS | 40.0% |
! | AAGATGATGAGGTATCACTC+TGG | + | chr6.2:58794089-58794108 | MS.gene30842:CDS | 40.0% |
! | CATATCCTAGTCTTCGTGTT+GGG | - | chr6.2:58793689-58793708 | None:intergenic | 40.0% |
! | GGAGCTGAATATCTTTTGTG+GGG | + | chr6.2:58793949-58793968 | MS.gene30842:CDS | 40.0% |
! | GTAGGAAGAAGATGCTTTTG+AGG | - | chr6.2:58793516-58793535 | None:intergenic | 40.0% |
! | TCTTTTATCGAGGAAGTTGC+TGG | - | chr6.2:58793830-58793849 | None:intergenic | 40.0% |
!! | TGTATAGAGGTGTTAGGAAG+AGG | + | chr6.2:58793630-58793649 | MS.gene30842:CDS | 40.0% |
ACGAAGACTAGGATATGGCT+AGG | + | chr6.2:58793692-58793711 | MS.gene30842:CDS | 45.0% | |
AGCAGGGAGGAAGATATTCA+AGG | + | chr6.2:58793592-58793611 | MS.gene30842:CDS | 45.0% | |
ATACCCAAAGCTATGCGTAG+GGG | - | chr6.2:58794032-58794051 | None:intergenic | 45.0% | |
ATCGAGGAAGTTGCTGGAAT+AGG | - | chr6.2:58793824-58793843 | None:intergenic | 45.0% | |
ATGCCATTGCAGCAACATCA+TGG | - | chr6.2:58793751-58793770 | None:intergenic | 45.0% | |
ATGTTGCTGCAATGGCATTG+AGG | + | chr6.2:58793753-58793772 | MS.gene30842:CDS | 45.0% | |
CATACCCAAAGCTATGCGTA+GGG | - | chr6.2:58794033-58794052 | None:intergenic | 45.0% | |
CCAACACGAAGACTAGGATA+TGG | + | chr6.2:58793687-58793706 | MS.gene30842:CDS | 45.0% | |
GCTAATCGTATCTCCGAATC+CGG | - | chr6.2:58793551-58793570 | None:intergenic | 45.0% | |
GGATTCGGAGATACGATTAG+CGG | + | chr6.2:58793550-58793569 | MS.gene30842:CDS | 45.0% | |
GTCTGAGTTGTGGAGGAATA+TGG | + | chr6.2:58793997-58794016 | MS.gene30842:CDS | 45.0% | |
TCATACCCAAAGCTATGCGT+AGG | - | chr6.2:58794034-58794053 | None:intergenic | 45.0% | |
TCCTAACACCTCTATACACC+GGG | - | chr6.2:58793628-58793647 | None:intergenic | 45.0% | |
TGCCATTGCAGCAACATCAT+GGG | - | chr6.2:58793750-58793769 | None:intergenic | 45.0% | |
! | CCATATCCTAGTCTTCGTGT+TGG | - | chr6.2:58793690-58793709 | None:intergenic | 45.0% |
! | TGTTGCTGCAATGGCATTGA+GGG | + | chr6.2:58793754-58793773 | MS.gene30842:CDS | 45.0% |
AGCCCATGATGTTGCTGCAA+TGG | + | chr6.2:58793745-58793764 | MS.gene30842:CDS | 50.0% | |
AGCTATGCGTAGGGGACATT+AGG | - | chr6.2:58794024-58794043 | None:intergenic | 50.0% | |
AGTAACCCGAAGAAGAGAGC+AGG | + | chr6.2:58793575-58793594 | MS.gene30842:CDS | 50.0% | |
ATGTCCCCTACGCATAGCTT+TGG | + | chr6.2:58794025-58794044 | MS.gene30842:CDS | 50.0% | |
ATTCAAGGAAACTCGCCACC+CGG | + | chr6.2:58793607-58793626 | MS.gene30842:CDS | 50.0% | |
CTACGCCTGTCTCAATTTCG+CGG | + | chr6.2:58793781-58793800 | MS.gene30842:CDS | 50.0% | |
GCTATGCGTAGGGGACATTA+GGG | - | chr6.2:58794023-58794042 | None:intergenic | 50.0% | |
GTAACCCGAAGAAGAGAGCA+GGG | + | chr6.2:58793576-58793595 | MS.gene30842:CDS | 50.0% | |
TAACACCTCTATACACCGGG+TGG | - | chr6.2:58793625-58793644 | None:intergenic | 50.0% | |
TCAATTTCGCGGACTCAGTG+TGG | + | chr6.2:58793792-58793811 | MS.gene30842:CDS | 50.0% | |
TGAGTCCGCGAAATTGAGAC+AGG | - | chr6.2:58793789-58793808 | None:intergenic | 50.0% | |
TGTAGCTATCGTCGCCACAA+AGG | + | chr6.2:58793928-58793947 | MS.gene30842:CDS | 50.0% | |
TGTCCCCTACGCATAGCTTT+GGG | + | chr6.2:58794026-58794045 | MS.gene30842:CDS | 50.0% | |
TTCCTCCCTGCTCTCTTCTT+CGG | - | chr6.2:58793584-58793603 | None:intergenic | 50.0% | |
TTGCAGCAACATCATGGGCT+CGG | - | chr6.2:58793745-58793764 | None:intergenic | 50.0% | |
! | GTTGCTGCAATGGCATTGAG+GGG | + | chr6.2:58793755-58793774 | MS.gene30842:CDS | 50.0% |
!! | ACCCGGTGTATAGAGGTGTT+AGG | + | chr6.2:58793624-58793643 | MS.gene30842:CDS | 50.0% |
!! | CTCTGGTCTTAAAGCTTCGG+TGG | - | chr6.2:58793876-58793895 | None:intergenic | 50.0% |
ATTTCGCGGACTCAGTGTGG+CGG | + | chr6.2:58793795-58793814 | MS.gene30842:CDS | 55.0% | |
TCCTCCCTGCTCTCTTCTTC+GGG | - | chr6.2:58793583-58793602 | None:intergenic | 55.0% | |
TGCAGCAACATCATGGGCTC+GGG | - | chr6.2:58793744-58793763 | None:intergenic | 55.0% | |
ACCCGAAGAAGAGAGCAGGG+AGG | + | chr6.2:58793579-58793598 | MS.gene30842:CDS | 60.0% | |
ACTCGCCACCCGGTGTATAG+AGG | + | chr6.2:58793617-58793636 | MS.gene30842:CDS | 60.0% | |
ATGGGCTCGGGCTGCCATAT+CGG | - | chr6.2:58793732-58793751 | None:intergenic | 60.0% | |
GGGAGCCCAACACGAAGACT+AGG | + | chr6.2:58793681-58793700 | MS.gene30842:CDS | 60.0% | |
! | CGGGCTGCCATATCGGCTGT+TGG | - | chr6.2:58793725-58793744 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 58793473 | 58794120 | 58793473 | ID=MS.gene30842 |
chr6.2 | mRNA | 58793473 | 58794120 | 58793473 | ID=MS.gene30842.t1;Parent=MS.gene30842 |
chr6.2 | exon | 58793473 | 58794120 | 58793473 | ID=MS.gene30842.t1.exon1;Parent=MS.gene30842.t1 |
chr6.2 | CDS | 58793473 | 58794120 | 58793473 | ID=cds.MS.gene30842.t1;Parent=MS.gene30842.t1 |
Gene Sequence |
Protein sequence |