Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021442.t1 | XP_003588491.1 | 97.4 | 265 | 7 | 0 | 1 | 265 | 1 | 265 | 4.80E-131 | 477.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021442.t1 | Q9LBG2 | 28.8 | 271 | 165 | 9 | 2 | 255 | 5 | 264 | 3.0e-17 | 90.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021442.t1 | G7I3F7 | 97.4 | 265 | 7 | 0 | 1 | 265 | 1 | 265 | 3.4e-131 | 477.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021442.t1 | MTR_1g007800 | 97.358 | 265 | 7 | 0 | 1 | 265 | 1 | 265 | 0.0 | 536 |
| MS.gene021442.t1 | MTR_4g058840 | 32.540 | 252 | 168 | 2 | 6 | 256 | 14 | 264 | 4.27e-36 | 129 |
| MS.gene021442.t1 | MTR_4g058820 | 32.540 | 252 | 168 | 2 | 6 | 256 | 14 | 264 | 4.27e-36 | 129 |
| MS.gene021442.t1 | MTR_4g058810 | 32.143 | 252 | 169 | 2 | 6 | 256 | 14 | 264 | 4.91e-36 | 129 |
| MS.gene021442.t1 | MTR_1g051165 | 30.556 | 252 | 168 | 3 | 6 | 251 | 17 | 267 | 7.29e-32 | 119 |
| MS.gene021442.t1 | MTR_4g058830 | 35.294 | 170 | 110 | 0 | 87 | 256 | 41 | 210 | 5.50e-29 | 109 |
| MS.gene021442.t1 | MTR_8g442750 | 27.820 | 266 | 170 | 9 | 6 | 260 | 17 | 271 | 1.13e-13 | 69.7 |
| MS.gene021442.t1 | MTR_4g052350 | 26.538 | 260 | 165 | 8 | 6 | 256 | 17 | 259 | 3.54e-13 | 68.2 |
| MS.gene021442.t1 | MTR_6g035395 | 29.050 | 179 | 119 | 4 | 84 | 258 | 68 | 242 | 1.10e-12 | 66.2 |
| MS.gene021442.t1 | MTR_4g052340 | 25.373 | 268 | 174 | 8 | 6 | 264 | 17 | 267 | 1.17e-12 | 66.6 |
| MS.gene021442.t1 | MTR_4g052300 | 25.769 | 260 | 167 | 8 | 6 | 256 | 11 | 253 | 4.74e-11 | 62.0 |
| MS.gene021442.t1 | MTR_7g105460 | 22.932 | 266 | 186 | 7 | 6 | 264 | 16 | 269 | 5.89e-11 | 61.6 |
| MS.gene021442.t1 | MTR_4g132850 | 27.386 | 241 | 157 | 7 | 18 | 252 | 18 | 246 | 5.89e-11 | 61.6 |
| MS.gene021442.t1 | MTR_7g094520 | 24.706 | 255 | 167 | 7 | 9 | 252 | 17 | 257 | 6.47e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021442.t1 | AT3G01980 | 59.774 | 266 | 106 | 1 | 1 | 265 | 1 | 266 | 4.04e-119 | 341 |
| MS.gene021442.t1 | AT3G01980 | 59.774 | 266 | 106 | 1 | 1 | 265 | 1 | 266 | 4.04e-119 | 341 |
| MS.gene021442.t1 | AT3G01980 | 53.716 | 296 | 106 | 2 | 1 | 265 | 1 | 296 | 6.74e-112 | 324 |
| MS.gene021442.t1 | AT3G01980 | 58.650 | 237 | 97 | 1 | 30 | 265 | 6 | 242 | 1.18e-101 | 296 |
| MS.gene021442.t1 | AT3G01980 | 54.598 | 174 | 78 | 1 | 1 | 173 | 1 | 174 | 5.17e-66 | 203 |
| MS.gene021442.t1 | AT3G01980 | 46.569 | 204 | 78 | 2 | 1 | 173 | 1 | 204 | 5.29e-59 | 187 |
| MS.gene021442.t1 | AT2G17845 | 33.594 | 256 | 163 | 6 | 6 | 256 | 50 | 303 | 6.94e-38 | 135 |
| MS.gene021442.t1 | AT1G63380 | 33.202 | 253 | 166 | 3 | 6 | 256 | 22 | 273 | 8.87e-38 | 134 |
| MS.gene021442.t1 | AT1G63380 | 33.202 | 253 | 166 | 3 | 6 | 256 | 18 | 269 | 9.07e-38 | 134 |
| MS.gene021442.t1 | AT1G63380 | 33.202 | 253 | 166 | 3 | 6 | 256 | 20 | 271 | 1.05e-37 | 134 |
| MS.gene021442.t1 | AT1G63380 | 33.202 | 253 | 166 | 3 | 6 | 256 | 25 | 276 | 1.18e-37 | 134 |
| MS.gene021442.t1 | AT3G55290 | 33.992 | 253 | 163 | 4 | 6 | 256 | 20 | 270 | 1.24e-37 | 134 |
| MS.gene021442.t1 | AT3G55290 | 33.992 | 253 | 163 | 4 | 6 | 256 | 21 | 271 | 1.25e-37 | 134 |
| MS.gene021442.t1 | AT1G62610 | 32.411 | 253 | 168 | 3 | 6 | 256 | 18 | 269 | 1.04e-36 | 131 |
| MS.gene021442.t1 | AT1G62610 | 32.411 | 253 | 168 | 3 | 6 | 256 | 16 | 267 | 1.10e-36 | 131 |
| MS.gene021442.t1 | AT1G62610 | 32.411 | 253 | 168 | 3 | 6 | 256 | 17 | 268 | 1.18e-36 | 131 |
| MS.gene021442.t1 | AT1G62610 | 32.411 | 253 | 168 | 3 | 6 | 256 | 22 | 273 | 1.45e-36 | 131 |
| MS.gene021442.t1 | AT3G55310 | 32.016 | 253 | 168 | 4 | 6 | 256 | 20 | 270 | 1.85e-34 | 125 |
| MS.gene021442.t1 | AT3G46170 | 30.830 | 253 | 171 | 4 | 6 | 256 | 29 | 279 | 2.40e-33 | 123 |
| MS.gene021442.t1 | AT2G29150 | 29.480 | 173 | 116 | 4 | 84 | 256 | 95 | 261 | 1.89e-13 | 68.9 |
| MS.gene021442.t1 | AT2G47140 | 25.954 | 262 | 173 | 7 | 6 | 259 | 9 | 257 | 6.07e-12 | 64.3 |
Find 63 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATAAAGCTTGTAAAATTT+TGG | 0.076813 | 1.4:+11671419 | MS.gene021442:CDS |
| CTTTCCCTTCCCACCGATAA+TGG | 0.206019 | 1.4:-11674827 | None:intergenic |
| TGTATTTATAACGTCGATAA+TGG | 0.234136 | 1.4:+11672840 | MS.gene021442:CDS |
| GGAAGTGGTTGAATTGGATA+TGG | 0.334118 | 1.4:+11671362 | MS.gene021442:CDS |
| TTCACACCTGCATCCTTGTT+TGG | 0.341452 | 1.4:-11671178 | None:intergenic |
| AAGGGAAAGGGCAGAGAAGT+TGG | 0.349755 | 1.4:+11674841 | MS.gene021442:CDS |
| CTGTGCTCCATCAACATATA+TGG | 0.350340 | 1.4:-11674969 | None:intergenic |
| CTGGAGTTCAGCAGTTAGTT+CGG | 0.353967 | 1.4:+11672914 | MS.gene021442:CDS |
| CTGTTAACTCAAGATGATCT+TGG | 0.368618 | 1.4:-11672714 | None:intergenic |
| AGAAATATCGTCGCCATTAG+AGG | 0.371340 | 1.4:-11671133 | None:intergenic |
| TGTTGAAGTTCCGCATCCTT+TGG | 0.387285 | 1.4:-11672804 | None:intergenic |
| TTTCCCTTCCCACCGATAAT+GGG | 0.391273 | 1.4:-11674826 | None:intergenic |
| TGTTGTGGAAGTGGTTGAAT+TGG | 0.391516 | 1.4:+11671356 | MS.gene021442:CDS |
| GTATTTATAACGTCGATAAT+GGG | 0.394081 | 1.4:+11672841 | MS.gene021442:CDS |
| GCATATGCCTCAGCCTTGGC+TGG | 0.394449 | 1.4:+11672895 | MS.gene021442:CDS |
| TGCTGCATATGCCTCAGCCT+TGG | 0.396535 | 1.4:+11672891 | MS.gene021442:CDS |
| GTGAGTAATACTCTCTTTGT+TGG | 0.410502 | 1.4:-11671111 | None:intergenic |
| GTTAATTGTTATTCTTATGA+AGG | 0.411867 | 1.4:+11671459 | MS.gene021442:CDS |
| AGAGTATTACTCACCTCTAA+TGG | 0.413408 | 1.4:+11671120 | MS.gene021442:CDS |
| GAGGCATATGCAGCAGCTCC+TGG | 0.414436 | 1.4:-11672883 | None:intergenic |
| TGGAGTTCAGCAGTTAGTTC+GGG | 0.420239 | 1.4:+11672915 | MS.gene021442:CDS |
| CAGGCATCGGCTATGGAGAT+AGG | 0.432742 | 1.4:+11674746 | MS.gene021442:intron |
| ATAATGGGAATTCATCTTCC+AGG | 0.433329 | 1.4:-11674811 | None:intergenic |
| TACTGATTCTGTTGTGGAAG+TGG | 0.440619 | 1.4:+11671347 | MS.gene021442:CDS |
| GGAAGATGAATTCCCATTAT+CGG | 0.455189 | 1.4:+11674814 | MS.gene021442:CDS |
| GGCAGAGAAGTTGGTGAAAG+AGG | 0.458842 | 1.4:+11674850 | MS.gene021442:CDS |
| CAATAGCATTAACTCTGATC+TGG | 0.461612 | 1.4:-11674775 | None:intergenic |
| CACATAAAGGAACGCATCCT+AGG | 0.467073 | 1.4:-11675004 | None:intergenic |
| TCAGAAAGAGGGCTTTATCC+AGG | 0.475145 | 1.4:+11672865 | MS.gene021442:CDS |
| GTGGAAGAACAATCACATAA+AGG | 0.476583 | 1.4:-11675017 | None:intergenic |
| GGAACAACCATATATGTTGA+TGG | 0.493494 | 1.4:+11674962 | MS.gene021442:CDS |
| GTCATCTATCTAATCAGTGA+TGG | 0.511788 | 1.4:+11674923 | MS.gene021442:CDS |
| ATTATCGGTGGGAAGGGAAA+GGG | 0.515455 | 1.4:+11674829 | MS.gene021442:CDS |
| CATTATCGGTGGGAAGGGAA+AGG | 0.521918 | 1.4:+11674828 | MS.gene021442:CDS |
| TCGATAATGGGTTCAGAAAG+AGG | 0.524746 | 1.4:+11672853 | MS.gene021442:CDS |
| ATTTAGCCAAACAAGGATGC+AGG | 0.531939 | 1.4:+11671172 | MS.gene021442:CDS |
| AGGCTGTTGGCCAAAGGATG+CGG | 0.532056 | 1.4:+11672794 | MS.gene021442:CDS |
| TTCAGTTACTGATTCTGTTG+TGG | 0.546092 | 1.4:+11671341 | MS.gene021442:CDS |
| AAAGGAACGCATCCTAGGCC+TGG | 0.552291 | 1.4:-11674999 | None:intergenic |
| CTGAACTCCAGCCAAGGCTG+AGG | 0.556384 | 1.4:-11672902 | None:intergenic |
| TATTAAAGGCTGTTGGCCAA+AGG | 0.558624 | 1.4:+11672788 | MS.gene021442:CDS |
| GATGGGTCATGCTACATGAC+AGG | 0.564383 | 1.4:+11674941 | MS.gene021442:CDS |
| AATTCCCATTATCGGTGGGA+AGG | 0.575283 | 1.4:+11674822 | MS.gene021442:CDS |
| ATTCCCATTATCGGTGGGAA+GGG | 0.578456 | 1.4:+11674823 | MS.gene021442:CDS |
| AGAGTTAATGCTATTGCAAG+AGG | 0.584311 | 1.4:+11674782 | MS.gene021442:CDS |
| AGGCAGCACCACTTGAGAGA+TGG | 0.586030 | 1.4:+11674870 | MS.gene021442:CDS |
| CACAGTCTATAACCAGGCCT+AGG | 0.587077 | 1.4:+11674987 | MS.gene021442:CDS |
| CGATAATGGGTTCAGAAAGA+GGG | 0.588137 | 1.4:+11672854 | MS.gene021442:CDS |
| GGAATTCATCTTCCAGGTGA+AGG | 0.588874 | 1.4:-11674805 | None:intergenic |
| TCATCTATCTAATCAGTGAT+GGG | 0.590549 | 1.4:+11674924 | MS.gene021442:CDS |
| TATTGCAAGAGGCCTTCACC+TGG | 0.592366 | 1.4:+11674793 | MS.gene021442:CDS |
| TGCGGAACTTCAACAAGGGT+GGG | 0.594166 | 1.4:+11672812 | MS.gene021442:CDS |
| TATCGACGTTATAAATACAA+TGG | 0.599236 | 1.4:-11672836 | None:intergenic |
| ACATCAAGCCATCTCTCAAG+TGG | 0.599720 | 1.4:-11674878 | None:intergenic |
| GCTTTCAATTTAGCCAAACA+AGG | 0.601130 | 1.4:+11671165 | MS.gene021442:CDS |
| ATGCGGAACTTCAACAAGGG+TGG | 0.606430 | 1.4:+11672811 | MS.gene021442:CDS |
| AGATGAATTCCCATTATCGG+TGG | 0.607123 | 1.4:+11674817 | MS.gene021442:CDS |
| AATGGCGACGATATTTCTCA+TGG | 0.613815 | 1.4:+11671138 | MS.gene021442:CDS |
| AGGATGCGGAACTTCAACAA+GGG | 0.642788 | 1.4:+11672808 | MS.gene021442:CDS |
| GATGAATTCCCATTATCGGT+GGG | 0.643626 | 1.4:+11674818 | MS.gene021442:CDS |
| AAGGATGCGGAACTTCAACA+AGG | 0.644362 | 1.4:+11672807 | MS.gene021442:CDS |
| ATGGAGCACAGTCTATAACC+AGG | 0.654617 | 1.4:+11674981 | MS.gene021442:CDS |
| TAACTGCTGAACTCCAGCCA+AGG | 0.675105 | 1.4:-11672908 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACAAAATCAAATAAAATAA+TGG | - | chr1.4:11671496-11671515 | None:intergenic | 10.0% |
| !! | TGAAATAATAAATCTTTAAA+AGG | + | chr1.4:11673762-11673781 | MS.gene021442:intron | 10.0% |
| !! | TTAAAATAATAATTATGAGA+AGG | + | chr1.4:11673646-11673665 | MS.gene021442:intron | 10.0% |
| !!! | AAATTTTTTGTGTATTTTTA+GGG | + | chr1.4:11671263-11671282 | MS.gene021442:intron | 10.0% |
| !!! | GAAATAATAAATCTTTAAAA+GGG | + | chr1.4:11673763-11673782 | MS.gene021442:intron | 10.0% |
| !!! | TAAATTTTTTGTGTATTTTT+AGG | + | chr1.4:11671262-11671281 | MS.gene021442:intron | 10.0% |
| !!! | TCTCATAATTATTATTTTAA+CGG | - | chr1.4:11673646-11673665 | None:intergenic | 10.0% |
| !! | AAAATCGAAAAAAAAAATGA+AGG | - | chr1.4:11671223-11671242 | None:intergenic | 15.0% |
| !! | TAGCTTAATTAAGTATAAAT+TGG | + | chr1.4:11674580-11674599 | MS.gene021442:intron | 15.0% |
| !!! | AATAGTGAAGATAAATTTTA+TGG | + | chr1.4:11672753-11672772 | MS.gene021442:CDS | 15.0% |
| !! | AATTAAGCTGTTTATTCAAA+TGG | + | chr1.4:11671967-11671986 | MS.gene021442:intron | 20.0% |
| !! | AATTTCTTACTAATGAGATA+GGG | + | chr1.4:11674236-11674255 | MS.gene021442:intron | 20.0% |
| !! | ATATTTATCACAAACTTGAT+AGG | - | chr1.4:11672081-11672100 | None:intergenic | 20.0% |
| !! | ATTAAGCTGTTTATTCAAAT+GGG | + | chr1.4:11671968-11671987 | MS.gene021442:intron | 20.0% |
| !! | CAAATTAATCTATTCAAACA+GGG | + | chr1.4:11671668-11671687 | MS.gene021442:intron | 20.0% |
| !! | GAAAAAGCTTATAGTTTATA+GGG | + | chr1.4:11671561-11671580 | MS.gene021442:intron | 20.0% |
| !! | TAATTTCTTACTAATGAGAT+AGG | + | chr1.4:11674235-11674254 | MS.gene021442:intron | 20.0% |
| !! | TGAAAAAGCTTATAGTTTAT+AGG | + | chr1.4:11671560-11671579 | MS.gene021442:intron | 20.0% |
| !! | TTTATCTTGTGTAATAGAAA+TGG | + | chr1.4:11671897-11671916 | MS.gene021442:intron | 20.0% |
| !!! | AACTTTTATAGCAGATAATA+AGG | - | chr1.4:11674704-11674723 | None:intergenic | 20.0% |
| !!! | ATAAAGCTTGTAAAATTTTG+GGG | + | chr1.4:11671421-11671440 | MS.gene021442:CDS | 20.0% |
| !!! | CTTATTTAGAGTTTCTTTTT+TGG | - | chr1.4:11673083-11673102 | None:intergenic | 20.0% |
| !!! | GATAAAGCTTGTAAAATTTT+GGG | + | chr1.4:11671420-11671439 | MS.gene021442:CDS | 20.0% |
| !!! | GGCATGATATAATTTTTTAT+GGG | + | chr1.4:11674410-11674429 | MS.gene021442:intron | 20.0% |
| !!! | GTTAATTGTTATTCTTATGA+AGG | + | chr1.4:11671459-11671478 | MS.gene021442:CDS | 20.0% |
| !!! | TGATAAAGCTTGTAAAATTT+TGG | + | chr1.4:11671419-11671438 | MS.gene021442:CDS | 20.0% |
| !!! | TGGCATGATATAATTTTTTA+TGG | + | chr1.4:11674409-11674428 | MS.gene021442:intron | 20.0% |
| !!! | TTAATGGATATGAAAAGAAA+AGG | - | chr1.4:11673893-11673912 | None:intergenic | 20.0% |
| !!! | TTTTACTTGCTTTTCATATT+TGG | + | chr1.4:11674625-11674644 | MS.gene021442:intron | 20.0% |
| ! | ACAAGAAAATAGTCTCTAAA+TGG | - | chr1.4:11672592-11672611 | None:intergenic | 25.0% |
| ! | ACTCCAATGATGATAATTAA+CGG | - | chr1.4:11674057-11674076 | None:intergenic | 25.0% |
| ! | ATAGATTCACACAAATAAAG+TGG | - | chr1.4:11672650-11672669 | None:intergenic | 25.0% |
| ! | ATCAAAGATTGTTTCAGTTA+GGG | - | chr1.4:11672367-11672386 | None:intergenic | 25.0% |
| ! | ATTATCTGCTATAAAAGTTG+AGG | + | chr1.4:11674705-11674724 | MS.gene021442:intron | 25.0% |
| ! | GACTTATTCATGAGTTTATA+TGG | + | chr1.4:11671623-11671642 | MS.gene021442:intron | 25.0% |
| ! | GATTGATAAAAGTAAAGAAC+AGG | - | chr1.4:11673053-11673072 | None:intergenic | 25.0% |
| ! | GCAAATTAATCTATTCAAAC+AGG | + | chr1.4:11671667-11671686 | MS.gene021442:intron | 25.0% |
| ! | GTATTTATAACGTCGATAAT+GGG | + | chr1.4:11672841-11672860 | MS.gene021442:CDS | 25.0% |
| ! | GTTTAAAAACACCTAAACTT+AGG | - | chr1.4:11671694-11671713 | None:intergenic | 25.0% |
| ! | TAATTGGGTTAAATCAATGT+GGG | - | chr1.4:11673399-11673418 | None:intergenic | 25.0% |
| ! | TAGATTCACACAAATAAAGT+GGG | - | chr1.4:11672649-11672668 | None:intergenic | 25.0% |
| ! | TATCGACGTTATAAATACAA+TGG | - | chr1.4:11672839-11672858 | None:intergenic | 25.0% |
| ! | TCAAAATCAAGGAAGTAATA+AGG | - | chr1.4:11674158-11674177 | None:intergenic | 25.0% |
| ! | TCATTTATTTGAAAATCAGC+TGG | + | chr1.4:11673017-11673036 | MS.gene021442:intron | 25.0% |
| ! | TCCTCTATTAAAGAATTCTT+CGG | - | chr1.4:11673266-11673285 | None:intergenic | 25.0% |
| ! | TGGTTGTAAATAACAGTAAT+TGG | - | chr1.4:11673935-11673954 | None:intergenic | 25.0% |
| ! | TGTAACAAAGGTTTAATGTT+AGG | + | chr1.4:11674085-11674104 | MS.gene021442:intron | 25.0% |
| ! | TGTATTTATAACGTCGATAA+TGG | + | chr1.4:11672840-11672859 | MS.gene021442:CDS | 25.0% |
| ! | TTAAGCTGTTTATTCAAATG+GGG | + | chr1.4:11671969-11671988 | MS.gene021442:intron | 25.0% |
| ! | TTTGGAAATATTAGAAAGTC+TGG | + | chr1.4:11674643-11674662 | MS.gene021442:intron | 25.0% |
| !! | AAGTATTGCACGAAAAATAA+CGG | + | chr1.4:11671317-11671336 | MS.gene021442:CDS | 25.0% |
| !! | AATAAATCTTTAAAAGGGAC+AGG | + | chr1.4:11673768-11673787 | MS.gene021442:intron | 25.0% |
| !! | AATACACTCTAACATGATTT+TGG | + | chr1.4:11672140-11672159 | MS.gene021442:intron | 25.0% |
| !! | ACAGTAATTGGTAATAAGTT+AGG | - | chr1.4:11673923-11673942 | None:intergenic | 25.0% |
| !! | AGTGAAGATAAATTTTATGG+CGG | + | chr1.4:11672756-11672775 | MS.gene021442:CDS | 25.0% |
| !! | ATAAGAAGATTTTCATGACT+TGG | + | chr1.4:11673098-11673117 | MS.gene021442:intron | 25.0% |
| !! | ATTTTGTATAGTAACTGAGA+TGG | - | chr1.4:11673844-11673863 | None:intergenic | 25.0% |
| !! | CAGTAATTGGTAATAAGTTA+GGG | - | chr1.4:11673922-11673941 | None:intergenic | 25.0% |
| !! | GTATTGAAAGTGATTTTGAA+GGG | - | chr1.4:11672125-11672144 | None:intergenic | 25.0% |
| !! | TGTATTGAAAGTGATTTTGA+AGG | - | chr1.4:11672126-11672145 | None:intergenic | 25.0% |
| !! | TTAGAAGCAGATATACTTTT+AGG | + | chr1.4:11673549-11673568 | MS.gene021442:intron | 25.0% |
| !! | TTGTCATTTGGATTATATCT+TGG | + | chr1.4:11673495-11673514 | MS.gene021442:intron | 25.0% |
| !!! | CAAAAGAAAAAGGTACTATT+TGG | + | chr1.4:11674312-11674331 | MS.gene021442:intron | 25.0% |
| !!! | GTAAATTCTTTTGACTTTCA+TGG | + | chr1.4:11673174-11673193 | MS.gene021442:intron | 25.0% |
| !!! | TGATTTTGGCAAAAATTTAG+AGG | + | chr1.4:11672154-11672173 | MS.gene021442:intron | 25.0% |
| !!! | TGTGATAAATATGACTTGTT+TGG | + | chr1.4:11672089-11672108 | MS.gene021442:intron | 25.0% |
| !!! | TTGTAAAATTTTGGGGAAAT+TGG | + | chr1.4:11671428-11671447 | MS.gene021442:CDS | 25.0% |
| !!! | TTTTTTGTGTATTTTTAGGG+TGG | + | chr1.4:11671266-11671285 | MS.gene021442:intron | 25.0% |
| AATGTTATCTGCAGAACAAA+AGG | - | chr1.4:11672980-11672999 | None:intergenic | 30.0% | |
| ACTACTTGAATCTAAGCATT+TGG | - | chr1.4:11672295-11672314 | None:intergenic | 30.0% | |
| AGAAGTTTGAACAGATAGTT+AGG | - | chr1.4:11674479-11674498 | None:intergenic | 30.0% | |
| AGCTGACAAATGAATTTCTA+TGG | + | chr1.4:11674372-11674391 | MS.gene021442:intron | 30.0% | |
| ATGCAAGATTGAGTAGTTTA+AGG | + | chr1.4:11671720-11671739 | MS.gene021442:intron | 30.0% | |
| CAGTTAGGTGATTAAATGAT+TGG | - | chr1.4:11673955-11673974 | None:intergenic | 30.0% | |
| CCTCTATTAAAGAATTCTTC+GGG | - | chr1.4:11673265-11673284 | None:intergenic | 30.0% | |
| CTAAAAAACTTCATCACACA+AGG | - | chr1.4:11673146-11673165 | None:intergenic | 30.0% | |
| CTAATTGGGTTAAATCAATG+TGG | - | chr1.4:11673400-11673419 | None:intergenic | 30.0% | |
| GATCAAAGATTGTTTCAGTT+AGG | - | chr1.4:11672368-11672387 | None:intergenic | 30.0% | |
| GATTGTTCATAACTCATAAG+TGG | + | chr1.4:11671795-11671814 | MS.gene021442:intron | 30.0% | |
| GTGAAGTTTAAAGACAAAAG+TGG | + | chr1.4:11672035-11672054 | MS.gene021442:intron | 30.0% | |
| TAAGTTAGGGTAGAGATTAA+TGG | - | chr1.4:11673909-11673928 | None:intergenic | 30.0% | |
| TCAATTTCCTATTACAGTAG+AGG | - | chr1.4:11674189-11674208 | None:intergenic | 30.0% | |
| TCATCTATCTAATCAGTGAT+GGG | + | chr1.4:11674924-11674943 | MS.gene021442:CDS | 30.0% | |
| TCATTTGGATTATATCTTGG+TGG | + | chr1.4:11673498-11673517 | MS.gene021442:intron | 30.0% | |
| TCTACTGTAATAGGAAATTG+AGG | + | chr1.4:11674188-11674207 | MS.gene021442:intron | 30.0% | |
| TGAGATGATTATGTCAAACT+GGG | + | chr1.4:11674340-11674359 | MS.gene021442:intron | 30.0% | |
| TGCAAGATTGAGTAGTTTAA+GGG | + | chr1.4:11671721-11671740 | MS.gene021442:intron | 30.0% | |
| TGTCCGTTAATTATCATCAT+TGG | + | chr1.4:11674051-11674070 | MS.gene021442:intron | 30.0% | |
| TTGAGATGATTATGTCAAAC+TGG | + | chr1.4:11674339-11674358 | MS.gene021442:intron | 30.0% | |
| TTTCGCTAAGCAAAAGAAAA+AGG | + | chr1.4:11674302-11674321 | MS.gene021442:intron | 30.0% | |
| TTTGGCAAAAATTTAGAGGT+CGG | + | chr1.4:11672158-11672177 | MS.gene021442:intron | 30.0% | |
| ! | ACTTCTGTAATTTTATCCTG+CGG | + | chr1.4:11674493-11674512 | MS.gene021442:intron | 30.0% |
| ! | AGATTTTTCATACGCTATCT+TGG | - | chr1.4:11671846-11671865 | None:intergenic | 30.0% |
| ! | ATGATGATAATTAACGGACA+AGG | - | chr1.4:11674051-11674070 | None:intergenic | 30.0% |
| ! | ATTACTTCCTTGATTTTGAG+TGG | + | chr1.4:11674159-11674178 | MS.gene021442:intron | 30.0% |
| ! | TGGTTTTTATTAAAGGCTGT+TGG | + | chr1.4:11672781-11672800 | MS.gene021442:CDS | 30.0% |
| !! | AGTGTTGCTTGGTTAATTTA+TGG | + | chr1.4:11673426-11673445 | MS.gene021442:intron | 30.0% |
| !! | GCAATTTAGTCTTTTGCATT+AGG | + | chr1.4:11672235-11672254 | MS.gene021442:intron | 30.0% |
| !! | TGAATCTGTTTTTCATGATG+CGG | + | chr1.4:11671395-11671414 | MS.gene021442:CDS | 30.0% |
| !! | TTAATGGGGTATTGGTAAAA+AGG | + | chr1.4:11673700-11673719 | MS.gene021442:intron | 30.0% |
| !!! | AATTTGTTTTGTTCAGGCAT+CGG | + | chr1.4:11674733-11674752 | MS.gene021442:intron | 30.0% |
| !!! | AGCTTTTTCATAAGCTATCT+TGG | - | chr1.4:11671550-11671569 | None:intergenic | 30.0% |
| !!! | ATTTTTAGGGTGGTTTTGAT+GGG | + | chr1.4:11671276-11671295 | MS.gene021442:intron | 30.0% |
| !!! | GACTATTTTCTTGTTTTCGT+TGG | + | chr1.4:11672598-11672617 | MS.gene021442:intron | 30.0% |
| !!! | GCTATCAATTTGTTTTGTTC+AGG | + | chr1.4:11674727-11674746 | MS.gene021442:intron | 30.0% |
| !!! | TAGAGTTTCTTTTTTGGCAA+CGG | - | chr1.4:11673077-11673096 | None:intergenic | 30.0% |
| !!! | TATTTTTAGGGTGGTTTTGA+TGG | + | chr1.4:11671275-11671294 | MS.gene021442:intron | 30.0% |
| AACGAATAGAGTTGTCAGTT+AGG | - | chr1.4:11673970-11673989 | None:intergenic | 35.0% | |
| AATCTATGAGCTGAACGAAT+TGG | + | chr1.4:11672663-11672682 | MS.gene021442:intron | 35.0% | |
| AATTATGAGAAGGATGACGA+TGG | + | chr1.4:11673656-11673675 | MS.gene021442:intron | 35.0% | |
| ACGCTATCTTGGAAAACTTA+TGG | - | chr1.4:11671835-11671854 | None:intergenic | 35.0% | |
| AGAGTTAATGCTATTGCAAG+AGG | + | chr1.4:11674782-11674801 | MS.gene021442:CDS | 35.0% | |
| AGGATTACCACTCAAAATCA+AGG | - | chr1.4:11674169-11674188 | None:intergenic | 35.0% | |
| AGTTACTGCATTGTTTGTGT+TGG | + | chr1.4:11673466-11673485 | MS.gene021442:intron | 35.0% | |
| ATAATGCCTAACATGTTGAC+AGG | - | chr1.4:11672467-11672486 | None:intergenic | 35.0% | |
| ATCTATGAGCTGAACGAATT+GGG | + | chr1.4:11672664-11672683 | MS.gene021442:intron | 35.0% | |
| ATTATGAGAAGGATGACGAT+GGG | + | chr1.4:11673657-11673676 | MS.gene021442:intron | 35.0% | |
| ATTCATCAAAACAGTCCTGA+AGG | - | chr1.4:11672515-11672534 | None:intergenic | 35.0% | |
| CAATAGCATTAACTCTGATC+TGG | - | chr1.4:11674778-11674797 | None:intergenic | 35.0% | |
| CAATGAAGATCAAATCGATC+CGG | + | chr1.4:11672325-11672344 | MS.gene021442:intron | 35.0% | |
| CCCGAAGAATTCTTTAATAG+AGG | + | chr1.4:11673262-11673281 | MS.gene021442:intron | 35.0% | |
| CTAGCTAATTCTCTTCTCAA+GGG | + | chr1.4:11673803-11673822 | MS.gene021442:intron | 35.0% | |
| CTGTTAACTCAAGATGATCT+TGG | - | chr1.4:11672717-11672736 | None:intergenic | 35.0% | |
| CTTGGTTAATTTATGGCTCA+TGG | + | chr1.4:11673433-11673452 | MS.gene021442:intron | 35.0% | |
| GAAATGGAACCCACATAAAA+TGG | - | chr1.4:11673364-11673383 | None:intergenic | 35.0% | |
| GCTTTCAATTTAGCCAAACA+AGG | + | chr1.4:11671165-11671184 | MS.gene021442:CDS | 35.0% | |
| GGAACAACCATATATGTTGA+TGG | + | chr1.4:11674962-11674981 | MS.gene021442:CDS | 35.0% | |
| GGAACTTCAAGTACTAGTAT+TGG | - | chr1.4:11674458-11674477 | None:intergenic | 35.0% | |
| GGAAGATGAATTCCCATTAT+CGG | + | chr1.4:11674814-11674833 | MS.gene021442:CDS | 35.0% | |
| GGTTCAGCATATACTATACA+AGG | - | chr1.4:11672433-11672452 | None:intergenic | 35.0% | |
| GTCATCTATCTAATCAGTGA+TGG | + | chr1.4:11674923-11674942 | MS.gene021442:CDS | 35.0% | |
| GTGAGTAATACTCTCTTTGT+TGG | - | chr1.4:11671114-11671133 | None:intergenic | 35.0% | |
| GTTACTGCATTGTTTGTGTT+GGG | + | chr1.4:11673467-11673486 | MS.gene021442:intron | 35.0% | |
| TAACTAATGTATGCACCTTC+AGG | + | chr1.4:11672497-11672516 | MS.gene021442:intron | 35.0% | |
| TCAACATGTTAGGCATTATG+AGG | + | chr1.4:11672468-11672487 | MS.gene021442:intron | 35.0% | |
| TGGTAATCCTCTACTGTAAT+AGG | + | chr1.4:11674179-11674198 | MS.gene021442:intron | 35.0% | |
| TGTTGGGTATACTTGTCATT+TGG | + | chr1.4:11673483-11673502 | MS.gene021442:intron | 35.0% | |
| TTCTTTGATCTGCTTGAGAA+TGG | + | chr1.4:11672622-11672641 | MS.gene021442:intron | 35.0% | |
| ! | AGAGTATTACTCACCTCTAA+TGG | + | chr1.4:11671120-11671139 | MS.gene021442:CDS | 35.0% |
| ! | AGATAAATTTTATGGCGGCA+TGG | + | chr1.4:11672761-11672780 | MS.gene021442:CDS | 35.0% |
| ! | ATAATGGGAATTCATCTTCC+AGG | - | chr1.4:11674814-11674833 | None:intergenic | 35.0% |
| ! | GGATTCTATTCATCTGAAAC+AGG | + | chr1.4:11672685-11672704 | MS.gene021442:intron | 35.0% |
| ! | TATGTCCCACCATTTTATGT+GGG | + | chr1.4:11673352-11673371 | MS.gene021442:intron | 35.0% |
| ! | TTATGTCCCACCATTTTATG+TGG | + | chr1.4:11673351-11673370 | MS.gene021442:intron | 35.0% |
| !! | TCAAGTACTAGTATTGGCTT+CGG | - | chr1.4:11674452-11674471 | None:intergenic | 35.0% |
| !! | TTCAGTTACTGATTCTGTTG+TGG | + | chr1.4:11671341-11671360 | MS.gene021442:CDS | 35.0% |
| !!! | AGAGTTTCTTTTTTGGCAAC+GGG | - | chr1.4:11673076-11673095 | None:intergenic | 35.0% |
| AATAAACAGTGCACTCTAGG+AGG | - | chr1.4:11674009-11674028 | None:intergenic | 40.0% | |
| AATGGCGACGATATTTCTCA+TGG | + | chr1.4:11671138-11671157 | MS.gene021442:CDS | 40.0% | |
| AGAAATATCGTCGCCATTAG+AGG | - | chr1.4:11671136-11671155 | None:intergenic | 40.0% | |
| AGATGAATTCCCATTATCGG+TGG | + | chr1.4:11674817-11674836 | MS.gene021442:CDS | 40.0% | |
| AGCAACACTCACTCTCTAAT+TGG | - | chr1.4:11673415-11673434 | None:intergenic | 40.0% | |
| AGTAACTGAGATGGTTGCAA+GGG | - | chr1.4:11673835-11673854 | None:intergenic | 40.0% | |
| ATATAGTGTCCGGGGTTAAT+GGG | + | chr1.4:11673685-11673704 | MS.gene021442:intron | 40.0% | |
| ATGGAACCCACATAAAATGG+TGG | - | chr1.4:11673361-11673380 | None:intergenic | 40.0% | |
| ATTCAAATGGGGCCTAAGTT+TGG | + | chr1.4:11671980-11671999 | MS.gene021442:intron | 40.0% | |
| ATTTAGCCAAACAAGGATGC+AGG | + | chr1.4:11671172-11671191 | MS.gene021442:CDS | 40.0% | |
| CAAACACTCGCTCTCTTATT+GGG | + | chr1.4:11673318-11673337 | MS.gene021442:intron | 40.0% | |
| CTATAACAGAGAAACTGCAC+AGG | - | chr1.4:11674553-11674572 | None:intergenic | 40.0% | |
| CTGTGCTCCATCAACATATA+TGG | - | chr1.4:11674972-11674991 | None:intergenic | 40.0% | |
| GAGAATAAACAGTGCACTCT+AGG | - | chr1.4:11674012-11674031 | None:intergenic | 40.0% | |
| GAGTTGCATCGTTGTAACAA+AGG | + | chr1.4:11674073-11674092 | MS.gene021442:intron | 40.0% | |
| GATGAATTCCCATTATCGGT+GGG | + | chr1.4:11674818-11674837 | MS.gene021442:CDS | 40.0% | |
| GCAACACTCACTCTCTAATT+GGG | - | chr1.4:11673414-11673433 | None:intergenic | 40.0% | |
| GCTAGCTAATTCTCTTCTCA+AGG | + | chr1.4:11673802-11673821 | MS.gene021442:intron | 40.0% | |
| GGAAGTGGTTGAATTGGATA+TGG | + | chr1.4:11671362-11671381 | MS.gene021442:CDS | 40.0% | |
| GGAGAGTTCACAATAGAGAT+AGG | - | chr1.4:11673872-11673891 | None:intergenic | 40.0% | |
| GGGTTCCATTTCCAAAATGT+AGG | + | chr1.4:11673372-11673391 | MS.gene021442:intron | 40.0% | |
| TAGTAACTGAGATGGTTGCA+AGG | - | chr1.4:11673836-11673855 | None:intergenic | 40.0% | |
| TATTAAAGGCTGTTGGCCAA+AGG | + | chr1.4:11672788-11672807 | MS.gene021442:CDS | 40.0% | |
| TCAAACACTCGCTCTCTTAT+TGG | + | chr1.4:11673317-11673336 | MS.gene021442:intron | 40.0% | |
| TCAAGGAAGTAATAAGGTGC+AGG | - | chr1.4:11674152-11674171 | None:intergenic | 40.0% | |
| TGGAACCCACATAAAATGGT+GGG | - | chr1.4:11673360-11673379 | None:intergenic | 40.0% | |
| TGTTGTGGAAGTGGTTGAAT+TGG | + | chr1.4:11671356-11671375 | MS.gene021442:CDS | 40.0% | |
| TTCAAACAGGGCCTAAGTTT+AGG | + | chr1.4:11671680-11671699 | MS.gene021442:intron | 40.0% | |
| ! | AAGACAAAAGTGGTTCTGCT+TGG | + | chr1.4:11672045-11672064 | MS.gene021442:intron | 40.0% |
| ! | AGACAAAAGTGGTTCTGCTT+GGG | + | chr1.4:11672046-11672065 | MS.gene021442:intron | 40.0% |
| ! | ATATTGACTAATCCAACCGC+AGG | - | chr1.4:11674512-11674531 | None:intergenic | 40.0% |
| ! | ATTAGAGAGTGAGTGTTGCT+TGG | + | chr1.4:11673415-11673434 | MS.gene021442:intron | 40.0% |
| ! | CTGTAATTTTATCCTGCGGT+TGG | + | chr1.4:11674497-11674516 | MS.gene021442:intron | 40.0% |
| ! | GATAATTAACGGACAAGGTG+CGG | - | chr1.4:11674046-11674065 | None:intergenic | 40.0% |
| ! | GGCGGCATGGTTTTTATTAA+AGG | + | chr1.4:11672774-11672793 | MS.gene021442:CDS | 40.0% |
| ! | TCAATGTGGGTCCTACATTT+TGG | - | chr1.4:11673386-11673405 | None:intergenic | 40.0% |
| !! | ACTAGTATTGGCTTCGGAAT+AGG | - | chr1.4:11674446-11674465 | None:intergenic | 40.0% |
| !! | CGATAATGGGTTCAGAAAGA+GGG | + | chr1.4:11672854-11672873 | MS.gene021442:CDS | 40.0% |
| !! | TACTGATTCTGTTGTGGAAG+TGG | + | chr1.4:11671347-11671366 | MS.gene021442:CDS | 40.0% |
| !! | TCGATAATGGGTTCAGAAAG+AGG | + | chr1.4:11672853-11672872 | MS.gene021442:CDS | 40.0% |
| !! | TGGGTCCTACATTTTGGAAA+TGG | - | chr1.4:11673380-11673399 | None:intergenic | 40.0% |
| !! | TTTTAGGAGTTGTCTCTGCA+TGG | + | chr1.4:11673565-11673584 | MS.gene021442:intron | 40.0% |
| !!! | GAGTTTCTTTTTTGGCAACG+GGG | - | chr1.4:11673075-11673094 | None:intergenic | 40.0% |
| AAGGATGCGGAACTTCAACA+AGG | + | chr1.4:11672807-11672826 | MS.gene021442:CDS | 45.0% | |
| AATTCCCATTATCGGTGGGA+AGG | + | chr1.4:11674822-11674841 | MS.gene021442:CDS | 45.0% | |
| ACATCAAGCCATCTCTCAAG+TGG | - | chr1.4:11674881-11674900 | None:intergenic | 45.0% | |
| AGGATGCGGAACTTCAACAA+GGG | + | chr1.4:11672808-11672827 | MS.gene021442:CDS | 45.0% | |
| ATGGAGCACAGTCTATAACC+AGG | + | chr1.4:11674981-11675000 | MS.gene021442:CDS | 45.0% | |
| ATTATCGGTGGGAAGGGAAA+GGG | + | chr1.4:11674829-11674848 | MS.gene021442:CDS | 45.0% | |
| ATTCCCATTATCGGTGGGAA+GGG | + | chr1.4:11674823-11674842 | MS.gene021442:CDS | 45.0% | |
| CACATAAAGGAACGCATCCT+AGG | - | chr1.4:11675007-11675026 | None:intergenic | 45.0% | |
| CCAAGTCCTGTCAACATGTT+AGG | + | chr1.4:11672458-11672477 | MS.gene021442:intron | 45.0% | |
| CCTAACATGTTGACAGGACT+TGG | - | chr1.4:11672461-11672480 | None:intergenic | 45.0% | |
| CTATGGCTGTGATATCGATG+TGG | + | chr1.4:11674389-11674408 | MS.gene021442:intron | 45.0% | |
| CTGGAGTTCAGCAGTTAGTT+CGG | + | chr1.4:11672914-11672933 | MS.gene021442:CDS | 45.0% | |
| GAGTAGTTTAAGGGTCTGCT+TGG | + | chr1.4:11671730-11671749 | MS.gene021442:intron | 45.0% | |
| GATATAGTGTCCGGGGTTAA+TGG | + | chr1.4:11673684-11673703 | MS.gene021442:intron | 45.0% | |
| GGAATTCATCTTCCAGGTGA+AGG | - | chr1.4:11674808-11674827 | None:intergenic | 45.0% | |
| TAAGAGAGCGAGTGTTTGAG+AGG | - | chr1.4:11673316-11673335 | None:intergenic | 45.0% | |
| TACCAATACCCCATTAACCC+CGG | - | chr1.4:11673697-11673716 | None:intergenic | 45.0% | |
| TATAGTGTCCGGGGTTAATG+GGG | + | chr1.4:11673686-11673705 | MS.gene021442:intron | 45.0% | |
| TCACTGTCACCACCAAACTT+AGG | - | chr1.4:11671995-11672014 | None:intergenic | 45.0% | |
| TGGAGTTCAGCAGTTAGTTC+GGG | + | chr1.4:11672915-11672934 | MS.gene021442:CDS | 45.0% | |
| TGTTGAAGTTCCGCATCCTT+TGG | - | chr1.4:11672807-11672826 | None:intergenic | 45.0% | |
| TGTTGACAGGACTTGGCATT+TGG | - | chr1.4:11672454-11672473 | None:intergenic | 45.0% | |
| TTCACACCTGCATCCTTGTT+TGG | - | chr1.4:11671181-11671200 | None:intergenic | 45.0% | |
| TTTCCCTTCCCACCGATAAT+GGG | - | chr1.4:11674829-11674848 | None:intergenic | 45.0% | |
| ! | TCAGAAAGAGGGCTTTATCC+AGG | + | chr1.4:11672865-11672884 | MS.gene021442:CDS | 45.0% |
| !! | ATGGGCACTGATATAGTGTC+CGG | + | chr1.4:11673675-11673694 | MS.gene021442:intron | 45.0% |
| !!! | TTTTGTTCAGGCATCGGCTA+TGG | + | chr1.4:11674739-11674758 | MS.gene021442:intron | 45.0% |
| AAGGGAAAGGGCAGAGAAGT+TGG | + | chr1.4:11674841-11674860 | MS.gene021442:CDS | 50.0% | |
| AAGGTGCAGGAAAGCCACTT+CGG | - | chr1.4:11674139-11674158 | None:intergenic | 50.0% | |
| AGTGACTCTATCCTCCGAAG+TGG | + | chr1.4:11674122-11674141 | MS.gene021442:intron | 50.0% | |
| ATGCGGAACTTCAACAAGGG+TGG | + | chr1.4:11672811-11672830 | MS.gene021442:CDS | 50.0% | |
| CAAATGGGGCCTAAGTTTGG+TGG | + | chr1.4:11671983-11672002 | MS.gene021442:intron | 50.0% | |
| CACAGTCTATAACCAGGCCT+AGG | + | chr1.4:11674987-11675006 | MS.gene021442:CDS | 50.0% | |
| CAGAGAAACTGCACAGGACA+TGG | - | chr1.4:11674547-11674566 | None:intergenic | 50.0% | |
| CATTATCGGTGGGAAGGGAA+AGG | + | chr1.4:11674828-11674847 | MS.gene021442:CDS | 50.0% | |
| CTTTCCCTTCCCACCGATAA+TGG | - | chr1.4:11674830-11674849 | None:intergenic | 50.0% | |
| GATGGGTCATGCTACATGAC+AGG | + | chr1.4:11674941-11674960 | MS.gene021442:CDS | 50.0% | |
| GGGTTCCAACTCAGATACTC+CGG | - | chr1.4:11672347-11672366 | None:intergenic | 50.0% | |
| TAACTGCTGAACTCCAGCCA+AGG | - | chr1.4:11672911-11672930 | None:intergenic | 50.0% | |
| TATTGCAAGAGGCCTTCACC+TGG | + | chr1.4:11674793-11674812 | MS.gene021442:CDS | 50.0% | |
| TGCGGAACTTCAACAAGGGT+GGG | + | chr1.4:11672812-11672831 | MS.gene021442:CDS | 50.0% | |
| ! | AAACAGTGCACTCTAGGAGG+AGG | - | chr1.4:11674006-11674025 | None:intergenic | 50.0% |
| ! | TCGATCCGGAGTATCTGAGT+TGG | + | chr1.4:11672339-11672358 | MS.gene021442:intron | 50.0% |
| !! | GGCAGAGAAGTTGGTGAAAG+AGG | + | chr1.4:11674850-11674869 | MS.gene021442:CDS | 50.0% |
| !! | TGGGCACTGATATAGTGTCC+GGG | + | chr1.4:11673676-11673695 | MS.gene021442:intron | 50.0% |
| !!! | TAGGGTGGTTTTGATGGGAG+AGG | + | chr1.4:11671281-11671300 | MS.gene021442:intron | 50.0% |
| AAAGGAACGCATCCTAGGCC+TGG | - | chr1.4:11675002-11675021 | None:intergenic | 55.0% | |
| AGGCAGCACCACTTGAGAGA+TGG | + | chr1.4:11674870-11674889 | MS.gene021442:CDS | 55.0% | |
| AGGCTGTTGGCCAAAGGATG+CGG | + | chr1.4:11672794-11672813 | MS.gene021442:CDS | 55.0% | |
| GTCCGGGGTTAATGGGGTAT+TGG | + | chr1.4:11673692-11673711 | MS.gene021442:intron | 55.0% | |
| TGCTGCATATGCCTCAGCCT+TGG | + | chr1.4:11672891-11672910 | MS.gene021442:CDS | 55.0% | |
| !! | CAGGCATCGGCTATGGAGAT+AGG | + | chr1.4:11674746-11674765 | MS.gene021442:intron | 55.0% |
| !! | GGGCACTGATATAGTGTCCG+GGG | + | chr1.4:11673677-11673696 | MS.gene021442:intron | 55.0% |
| CTGAACTCCAGCCAAGGCTG+AGG | - | chr1.4:11672905-11672924 | None:intergenic | 60.0% | |
| GAGGCATATGCAGCAGCTCC+TGG | - | chr1.4:11672886-11672905 | None:intergenic | 60.0% | |
| GCATATGCCTCAGCCTTGGC+TGG | + | chr1.4:11672895-11672914 | MS.gene021442:CDS | 60.0% | |
| GTGCAGGAAAGCCACTTCGG+AGG | - | chr1.4:11674136-11674155 | None:intergenic | 60.0% | |
| TCTAGGAGGAGGAGGAGGAG+GGG | - | chr1.4:11673995-11674014 | None:intergenic | 60.0% | |
| ! | ACTCTAGGAGGAGGAGGAGG+AGG | - | chr1.4:11673997-11674016 | None:intergenic | 60.0% |
| ! | CAGTGCACTCTAGGAGGAGG+AGG | - | chr1.4:11674003-11674022 | None:intergenic | 60.0% |
| ! | CTCTAGGAGGAGGAGGAGGA+GGG | - | chr1.4:11673996-11674015 | None:intergenic | 60.0% |
| ! | TGCACTCTAGGAGGAGGAGG+AGG | - | chr1.4:11674000-11674019 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 11671102 | 11675027 | 11671102 | ID=MS.gene021442 |
| chr1.4 | mRNA | 11671102 | 11675027 | 11671102 | ID=MS.gene021442.t1;Parent=MS.gene021442 |
| chr1.4 | exon | 11671102 | 11671193 | 11671102 | ID=MS.gene021442.t1.exon1;Parent=MS.gene021442.t1 |
| chr1.4 | CDS | 11671102 | 11671193 | 11671102 | ID=cds.MS.gene021442.t1;Parent=MS.gene021442.t1 |
| chr1.4 | exon | 11671284 | 11671480 | 11671284 | ID=MS.gene021442.t1.exon2;Parent=MS.gene021442.t1 |
| chr1.4 | CDS | 11671284 | 11671480 | 11671284 | ID=cds.MS.gene021442.t1;Parent=MS.gene021442.t1 |
| chr1.4 | exon | 11672707 | 11672936 | 11672707 | ID=MS.gene021442.t1.exon3;Parent=MS.gene021442.t1 |
| chr1.4 | CDS | 11672707 | 11672936 | 11672707 | ID=cds.MS.gene021442.t1;Parent=MS.gene021442.t1 |
| chr1.4 | exon | 11674749 | 11675027 | 11674749 | ID=MS.gene021442.t1.exon4;Parent=MS.gene021442.t1 |
| chr1.4 | CDS | 11674749 | 11675027 | 11674749 | ID=cds.MS.gene021442.t1;Parent=MS.gene021442.t1 |
| Gene Sequence |
| Protein sequence |
