AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073684

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073684.t1 MTR_1g051165 95.374 281 12 1 1 280 1 281 0.0 541
MS.gene073684.t1 MTR_4g058840 72.993 274 70 1 7 280 4 273 3.71e-145 408
MS.gene073684.t1 MTR_4g058820 72.993 274 70 1 7 280 4 273 3.71e-145 408
MS.gene073684.t1 MTR_4g058810 72.263 274 72 1 7 280 4 273 1.19e-143 404
MS.gene073684.t1 MTR_4g058830 72.189 169 47 0 112 280 51 219 1.15e-84 253
MS.gene073684.t1 MTR_3g085740 35.185 270 157 11 5 271 66 320 4.03e-33 123
MS.gene073684.t1 MTR_4g052320 31.599 269 163 8 8 271 2 254 5.14e-29 111
MS.gene073684.t1 MTR_1g007800 29.688 256 174 3 17 271 6 256 3.10e-27 106
MS.gene073684.t1 MTR_4g052350 32.443 262 159 8 13 271 13 259 4.65e-26 103
MS.gene073684.t1 MTR_4g052300 30.112 269 166 9 8 271 2 253 5.35e-26 103
MS.gene073684.t1 MTR_4g052340 30.682 264 165 8 11 271 11 259 8.59e-25 100
MS.gene073684.t1 MTR_7g083870 28.358 268 170 6 12 270 33 287 2.94e-24 99.8
MS.gene073684.t1 MTR_6g023590 27.413 259 175 6 13 268 12 260 6.55e-24 97.8
MS.gene073684.t1 MTR_7g110140 29.730 259 167 6 13 268 5 251 6.90e-23 95.1
MS.gene073684.t1 MTR_7g110130 28.464 267 161 8 13 268 5 252 1.07e-22 94.7
MS.gene073684.t1 MTR_6g023950 28.352 261 170 7 13 268 12 260 1.36e-22 94.4
MS.gene073684.t1 MTR_6g035395 26.616 263 159 7 12 268 3 237 7.34e-22 92.0
MS.gene073684.t1 MTR_4g064883 29.588 267 169 11 12 273 10 262 2.77e-21 90.9
MS.gene073684.t1 MTR_2g090165 28.185 259 173 6 12 268 4 251 2.83e-21 90.9
MS.gene073684.t1 MTR_6g023610 28.682 258 171 8 13 267 12 259 4.74e-21 90.1
MS.gene073684.t1 MTR_6g023910 26.357 258 177 7 13 267 12 259 3.46e-20 87.8
MS.gene073684.t1 MTR_7g110160 27.715 267 152 8 12 271 4 236 7.36e-19 84.0
MS.gene073684.t1 MTR_6g023990 26.718 262 173 7 13 268 13 261 8.66e-19 84.0
MS.gene073684.t1 MTR_3g068085 25.287 261 182 8 14 273 15 263 1.18e-18 83.6
MS.gene073684.t1 MTR_7g105460 27.652 264 172 7 13 271 12 261 1.60e-18 83.6
MS.gene073684.t1 MTR_3g068070 24.427 262 183 9 14 273 15 263 4.17e-18 82.0
MS.gene073684.t1 MTR_4g064887 24.710 259 182 6 14 271 15 261 5.15e-18 82.0
MS.gene073684.t1 MTR_6g023600 25.869 259 179 6 13 268 12 260 5.59e-18 81.6
MS.gene073684.t1 MTR_4g105310 31.797 217 113 7 20 213 52 256 8.55e-18 81.3
MS.gene073684.t1 MTR_3g087850 32.323 198 115 7 18 213 30 210 1.26e-17 81.3
MS.gene073684.t1 MTR_3g068175 27.099 262 176 10 14 273 17 265 1.54e-17 80.9
MS.gene073684.t1 MTR_3g087860 34.078 179 100 6 36 213 34 195 2.77e-17 80.1
MS.gene073684.t1 MTR_7g094510 28.148 270 157 12 14 268 6 253 4.83e-17 79.0
MS.gene073684.t1 MTR_4g105310 31.797 217 113 7 20 213 52 256 4.91e-17 80.1
MS.gene073684.t1 MTR_7g094520 28.409 264 164 11 14 268 11 258 8.90e-17 78.2
MS.gene073684.t1 MTR_7g105580 25.581 258 161 6 13 268 7 235 2.16e-16 77.0
MS.gene073684.t1 MTR_3g068155 25.475 263 179 7 14 273 19 267 2.23e-16 77.4
MS.gene073684.t1 MTR_1g082760 27.228 202 140 5 7 207 33 228 2.77e-16 77.4
MS.gene073684.t1 MTR_4g078630 28.014 282 168 8 4 270 10 271 2.90e-16 77.4
MS.gene073684.t1 MTR_1196s0010 28.195 266 151 13 15 268 275 512 4.57e-16 78.2
MS.gene073684.t1 MTR_8g442750 30.075 266 160 12 14 268 14 264 1.28e-15 75.9
MS.gene073684.t1 MTR_3g068175 26.692 266 176 11 14 273 17 269 1.98e-15 74.7
MS.gene073684.t1 MTR_7g113650 25.743 202 143 5 7 207 33 228 2.28e-15 74.7
MS.gene073684.t1 MTR_3g068065 23.438 256 181 9 20 273 23 265 2.93e-15 74.3
MS.gene073684.t1 MTR_7g105590 28.571 196 127 5 13 207 7 190 4.70e-15 72.4
MS.gene073684.t1 MTR_3g020670 27.407 270 176 7 10 270 12 270 6.66e-15 73.6
MS.gene073684.t1 MTR_4g131740 25.475 263 183 6 10 268 36 289 1.16e-14 72.8
MS.gene073684.t1 MTR_7g063330 26.459 257 169 8 20 270 21 263 1.96e-14 72.0
MS.gene073684.t1 MTR_7g063390 26.394 269 169 10 14 271 16 266 2.35e-14 71.6
MS.gene073684.t1 MTR_7g107670 25.279 269 176 8 12 270 31 284 2.45e-14 72.0
MS.gene073684.t1 MTR_7g063270 23.938 259 173 9 20 270 22 264 7.51e-14 70.1
MS.gene073684.t1 MTR_6g023600 25.097 259 175 7 13 268 12 254 1.58e-13 69.3
MS.gene073684.t1 MTR_7g105570 27.895 190 123 5 87 271 38 218 5.91e-13 67.0
MS.gene073684.t1 MTR_7g063320 24.809 262 182 8 14 271 15 265 8.79e-13 67.0
MS.gene073684.t1 MTR_7g063360 24.528 265 179 8 14 271 16 266 1.06e-12 67.0
MS.gene073684.t1 MTR_7g063260 23.596 267 177 9 14 270 16 265 1.28e-12 66.6
MS.gene073684.t1 MTR_7g080410 27.723 202 135 5 9 207 32 225 1.30e-12 67.4
MS.gene073684.t1 MTR_4g064887 25.243 206 142 5 14 218 15 209 1.54e-12 65.9
MS.gene073684.t1 MTR_7g080410 27.723 202 135 5 9 207 32 225 1.54e-12 67.0
MS.gene073684.t1 MTR_6g088500 22.034 236 169 4 8 230 172 405 5.39e-12 66.2
MS.gene073684.t1 MTR_8g096620 26.131 199 136 4 17 215 48 235 7.43e-12 65.1
MS.gene073684.t1 MTR_6g088500 22.581 217 155 3 8 213 172 386 1.45e-11 64.7
MS.gene073684.t1 MTR_4g134660 27.053 207 129 7 14 213 6 197 9.96e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073684.t1 AT1G63380 64.599 274 94 1 7 280 8 278 7.07e-130 370
MS.gene073684.t1 AT1G63380 63.701 281 97 2 2 280 8 285 7.92e-130 370
MS.gene073684.t1 AT1G63380 64.599 274 94 1 7 280 12 282 1.12e-129 369
MS.gene073684.t1 AT1G62610 64.964 274 93 1 7 280 7 277 1.43e-129 369
MS.gene073684.t1 AT1G63380 64.599 274 94 1 7 280 10 280 1.51e-129 369
MS.gene073684.t1 AT1G62610 64.964 274 93 1 7 280 8 278 1.73e-129 369
MS.gene073684.t1 AT1G62610 64.964 274 93 1 7 280 6 276 1.76e-129 369
MS.gene073684.t1 AT1G62610 64.964 274 93 1 7 280 12 282 2.95e-129 368
MS.gene073684.t1 AT3G55290 65.201 273 91 2 8 280 11 279 9.76e-129 367
MS.gene073684.t1 AT3G55290 65.201 273 91 2 8 280 12 280 9.78e-129 367
MS.gene073684.t1 AT3G46170 63.121 282 98 3 1 280 11 288 1.21e-126 362
MS.gene073684.t1 AT3G55310 62.774 274 98 2 7 280 10 279 2.97e-125 358
MS.gene073684.t1 AT2G17845 64.074 270 92 3 13 280 46 312 4.95e-120 346
MS.gene073684.t1 AT3G01980 31.641 256 170 2 17 271 6 257 5.99e-35 127
MS.gene073684.t1 AT3G01980 31.641 256 170 2 17 271 6 257 5.99e-35 127
MS.gene073684.t1 AT3G01980 34.518 197 128 1 76 271 37 233 7.57e-33 120
MS.gene073684.t1 AT1G24360 32.103 271 160 13 4 268 64 316 3.76e-29 113
MS.gene073684.t1 AT3G01980 28.322 286 170 3 17 271 6 287 1.50e-28 110
MS.gene073684.t1 AT3G26760 28.889 270 168 7 12 270 34 290 1.09e-24 100
MS.gene073684.t1 AT5G06060 30.916 262 166 9 14 273 9 257 1.15e-24 100
MS.gene073684.t1 AT3G51680 30.935 278 159 8 13 270 31 295 1.59e-23 97.8
MS.gene073684.t1 AT3G26770 29.032 279 171 9 13 278 40 304 2.65e-22 94.4
MS.gene073684.t1 AT5G65205 33.831 201 114 7 15 213 7 190 1.43e-21 92.0
MS.gene073684.t1 AT2G29150 27.586 261 175 8 14 273 16 263 1.80e-21 91.3
MS.gene073684.t1 AT2G47120 26.538 260 178 5 13 271 6 253 2.46e-21 90.9
MS.gene073684.t1 AT2G47120 26.538 260 178 5 13 271 5 252 2.57e-21 90.9
MS.gene073684.t1 AT3G03980 28.986 276 164 11 9 268 9 268 6.85e-21 89.7
MS.gene073684.t1 AT3G01980 31.073 177 117 3 17 192 6 178 7.93e-20 85.1
MS.gene073684.t1 AT5G10050 31.034 203 117 9 15 213 6 189 2.56e-19 85.9
MS.gene073684.t1 AT2G29370 26.545 275 187 9 4 276 6 267 4.01e-19 85.1
MS.gene073684.t1 AT2G47140 28.185 259 171 7 13 268 5 251 4.80e-19 84.7
MS.gene073684.t1 AT2G47130 27.027 259 173 6 13 268 5 250 4.88e-18 82.0
MS.gene073684.t1 AT2G30670 26.054 261 180 7 14 273 7 255 2.84e-17 79.7
MS.gene073684.t1 AT2G29360 28.309 272 180 9 4 273 6 264 3.42e-17 79.7
MS.gene073684.t1 AT3G29250 24.906 265 172 5 13 268 5 251 7.41e-17 78.6
MS.gene073684.t1 AT1G52340 27.239 268 178 7 12 270 16 275 8.39e-17 79.0
MS.gene073684.t1 AT1G07440 25.385 260 182 8 14 273 12 259 8.39e-17 78.6
MS.gene073684.t1 AT3G29250 24.906 265 172 5 13 268 41 287 1.55e-16 78.2
MS.gene073684.t1 AT3G29260 26.667 270 162 7 12 268 4 250 2.32e-16 77.4
MS.gene073684.t1 AT5G18210 27.519 258 175 9 14 267 8 257 3.03e-16 77.0
MS.gene073684.t1 AT3G29250 25.000 264 171 5 14 268 44 289 4.03e-16 77.0
MS.gene073684.t1 AT3G47360 31.313 198 125 6 17 214 48 234 7.21e-16 76.6
MS.gene073684.t1 AT2G29310 25.385 260 179 8 14 271 7 253 8.63e-16 75.9
MS.gene073684.t1 AT2G29330 24.427 262 183 8 14 273 7 255 9.00e-16 75.5
MS.gene073684.t1 AT1G07450 25.954 262 178 9 14 273 8 255 9.00e-16 75.5
MS.gene073684.t1 AT3G47350 28.436 211 140 6 17 227 47 246 1.03e-15 76.3
MS.gene073684.t1 AT2G29320 25.670 261 182 7 14 273 13 262 1.04e-15 75.5
MS.gene073684.t1 AT3G47350 27.650 217 146 6 11 227 41 246 1.35e-15 75.9
MS.gene073684.t1 AT2G29300 25.000 264 180 8 14 273 7 256 5.44e-15 73.6
MS.gene073684.t1 AT3G42960 27.037 270 170 6 13 270 7 261 7.17e-15 73.2
MS.gene073684.t1 AT2G29350 24.809 262 181 10 14 273 15 262 8.76e-15 72.8
MS.gene073684.t1 AT2G29260 27.138 269 176 12 9 273 64 316 9.67e-15 73.6
MS.gene073684.t1 AT3G05260 25.279 269 176 9 9 268 32 284 3.75e-14 71.6
MS.gene073684.t1 AT2G29300 24.806 258 182 7 14 270 7 253 4.92e-14 71.2
MS.gene073684.t1 AT3G04000 23.381 278 182 9 10 271 10 272 1.03e-13 70.1
MS.gene073684.t1 AT5G50130 26.522 230 140 8 4 213 24 244 9.24e-13 67.0
MS.gene073684.t1 AT5G50130 26.609 233 137 9 4 213 24 245 1.53e-12 66.6
MS.gene073684.t1 AT5G50690 27.500 200 132 7 13 211 44 231 1.89e-12 66.2
MS.gene073684.t1 AT5G50590 27.500 200 132 7 13 211 44 231 1.89e-12 66.2
MS.gene073684.t1 AT5G50130 26.522 230 140 7 4 213 24 244 2.18e-12 66.6
MS.gene073684.t1 AT5G50130 26.609 233 137 9 4 213 24 245 3.15e-12 66.2
MS.gene073684.t1 AT5G50690 27.363 201 133 7 12 211 43 231 3.31e-12 65.9
MS.gene073684.t1 AT5G50590 27.363 201 133 7 12 211 43 231 3.31e-12 65.9
MS.gene073684.t1 AT4G05530 26.056 284 142 11 12 268 7 249 3.40e-12 65.5
MS.gene073684.t1 AT5G50130 26.609 233 137 9 4 213 24 245 7.74e-12 65.1
MS.gene073684.t1 AT5G50600 30.435 207 127 9 12 215 43 235 1.38e-11 64.3
MS.gene073684.t1 AT5G50700 30.435 207 127 9 12 215 43 235 1.38e-11 64.3
MS.gene073684.t1 AT1G10310 25.871 201 129 6 17 213 18 202 2.73e-11 62.8
MS.gene073684.t1 AT3G12800 28.731 268 156 11 17 268 13 261 3.09e-11 63.2

Find 76 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAATATTTCTTCAACTTC+TGG 0.232365 1.1:+35897529 MS.gene073684:CDS
ATTCAGAAGAATCGTGAATT+AGG 0.255985 1.1:-35899954 None:intergenic
AATAAACCCTTTGAGAAGTT+TGG 0.262247 1.1:+35899894 MS.gene073684:CDS
AAACTAACTTAACTGGTTCT+TGG 0.262537 1.1:+35897449 MS.gene073684:CDS
CGTATAGATGGTTGATTTGA+TGG 0.313890 1.1:-35897231 None:intergenic
ACAGGTCATGGCTTTGGAAT+TGG 0.319499 1.1:+35899768 MS.gene073684:intron
CAGGTCATGGCTTTGGAATT+GGG 0.326278 1.1:+35899769 MS.gene073684:intron
TTCAACTTCTGGTTTGAATC+GGG 0.350170 1.1:+35897540 MS.gene073684:CDS
AGGAAGTGTTAAATCTCCTT+TGG 0.359377 1.1:+35897393 MS.gene073684:CDS
ATTAACAATGCTGGTGTTAG+AGG 0.363495 1.1:+35897373 MS.gene073684:CDS
CTTCAACTTCTGGTTTGAAT+CGG 0.369506 1.1:+35897539 MS.gene073684:CDS
CGGCTACGGCGCGGAGGTTG+AGG 0.375343 1.1:-35897264 None:intergenic
ATTTCTGATTTGAAAATTCC+AGG 0.381992 1.1:-35899823 None:intergenic
CATCAAATCAACCATCTATA+CGG 0.382027 1.1:+35897232 MS.gene073684:CDS
CAGAAGGCGTGGGATGCCTT+TGG 0.400753 1.1:+35897334 MS.gene073684:CDS
TTTGAGAAGTTTGGTTGCTT+CGG 0.405858 1.1:+35899903 MS.gene073684:CDS
TGATTTGATGGCAGAGGGAG+TGG 0.410540 1.1:-35897219 None:intergenic
GGATCCTGCATTGACATCTC+TGG 0.418260 1.1:+35899924 MS.gene073684:CDS
AGCGGCAACGATTCTGCAGC+CGG 0.418418 1.1:-35897176 None:intergenic
TTGAATCGGGGAAACCTCTC+TGG 0.423556 1.1:+35897553 MS.gene073684:CDS
GGTTTCCGTTACCGTATAGA+TGG 0.436889 1.1:-35897243 None:intergenic
TATGTGTGATGCACACATAA+AGG 0.439557 1.1:+35897498 MS.gene073684:CDS
TGTTTGACAGGTCATGGCTT+TGG 0.442198 1.1:+35899762 MS.gene073684:intron
GACAAAGTGGTGTTAGTAAC+CGG 0.443721 1.1:+35897106 MS.gene073684:CDS
TTAGTAACCGGCGCATCCTC+CGG 0.449628 1.1:+35897118 MS.gene073684:CDS
CTTTACAAAGAAGAATAAAT+CGG 0.459390 1.1:-35900030 None:intergenic
GATGGTTGATTTGATGGCAG+AGG 0.465252 1.1:-35897225 None:intergenic
GCTTATGCATCTTCAAAGGC+TGG 0.468683 1.1:+35897583 MS.gene073684:CDS
ACCGGCGCATCCTCCGGCCT+CGG 0.469173 1.1:+35897124 MS.gene073684:CDS
ATGTGTGATGCACACATAAA+GGG 0.472795 1.1:+35897499 MS.gene073684:CDS
TGGATTTGTCTGAAGATGAA+TGG 0.477320 1.1:+35897413 MS.gene073684:CDS
GATGGTGGAGCAACCTTACC+TGG 0.485121 1.1:+35900003 MS.gene073684:CDS
TAACTTAACTGGTTCTTGGT+TGG 0.493107 1.1:+35897453 MS.gene073684:CDS
AAGCAACCAAACTTCTCAAA+GGG 0.503208 1.1:-35899900 None:intergenic
TGATGCACACATAAAGGGTT+CGG 0.520044 1.1:+35897504 MS.gene073684:CDS
ATAAATCGGTACACCAGGTA+AGG 0.521362 1.1:-35900016 None:intergenic
TACGTCGAGCTCAACGGCTA+CGG 0.522511 1.1:-35897278 None:intergenic
TCAACTTCTGGTTTGAATCG+GGG 0.527475 1.1:+35897541 MS.gene073684:CDS
ATGGTTGATTTGATGGCAGA+GGG 0.533083 1.1:-35897224 None:intergenic
GATGGCAGAGGGAGTGGAGG+CGG 0.533320 1.1:-35897213 None:intergenic
AGAGTGAATTCAATATCTCC+TGG 0.540831 1.1:+35899805 MS.gene073684:CDS
TTGTCATCTAGCTTATGCCA+TGG 0.542529 1.1:-35897088 None:intergenic
ACAAGTCCGTGCAGAAGGCG+TGG 0.547318 1.1:+35897323 MS.gene073684:CDS
GGCATCCCACGCCTTCTGCA+CGG 0.553501 1.1:-35897329 None:intergenic
CGATTCTTCTGAATATGTCA+CGG 0.555081 1.1:+35899963 MS.gene073684:CDS
CATCGACAAGTCCGTGCAGA+AGG 0.555236 1.1:+35897318 MS.gene073684:CDS
ACAGAAGTCGTATCCGAGGC+CGG 0.555252 1.1:-35897137 None:intergenic
TGTTGCTTATGCATCTTCAA+AGG 0.555754 1.1:+35897579 MS.gene073684:CDS
GCGGTCGAGACGGCGAGCAG+CGG 0.558468 1.1:-35897194 None:intergenic
TGTCTCGATCTCGCTAAAGC+CGG 0.559326 1.1:+35897157 MS.gene073684:CDS
TCCGAGGCCGGAGGATGCGC+CGG 0.561376 1.1:-35897125 None:intergenic
CGAGCCAGAGATGTCAATGC+AGG 0.573817 1.1:-35899928 None:intergenic
GAAGCAACCAAACTTCTCAA+AGG 0.582285 1.1:-35899901 None:intergenic
CAATGTATCAATATGTCCAA+AGG 0.584653 1.1:-35897350 None:intergenic
ATCAACCATCTATACGGTAA+CGG 0.588521 1.1:+35897238 MS.gene073684:CDS
CGCGGATACGTCGAGCTCAA+CGG 0.590703 1.1:-35897284 None:intergenic
CAAGTCCGTGCAGAAGGCGT+GGG 0.595258 1.1:+35897324 MS.gene073684:CDS
GATACATTGATTAACAATGC+TGG 0.598125 1.1:+35897364 MS.gene073684:CDS
GATTCTTCTGAATATGTCAC+GGG 0.598872 1.1:+35899964 MS.gene073684:CDS
GGGAGTGGAGGCGGTCGAGA+CGG 0.600933 1.1:-35897204 None:intergenic
GTCGATGGAAGCGCCGTCCG+CGG 0.601036 1.1:-35897302 None:intergenic
TTACCTTTGTAAGCATGTTG+AGG 0.603542 1.1:-35897606 None:intergenic
GAAGAATAAATCGGTACACC+AGG 0.607308 1.1:-35900021 None:intergenic
GAGCTCGACGTATCCGCGGA+CGG 0.607403 1.1:+35897289 MS.gene073684:CDS
CTTCTGCACGGACTTGTCGA+TGG 0.618059 1.1:-35897317 None:intergenic
AAGAAGTAGAGCTAGAGCCA+TGG 0.629361 1.1:+35897071 MS.gene073684:CDS
TTTGATGGCAGAGGGAGTGG+AGG 0.639655 1.1:-35897216 None:intergenic
TCATCTTCAGACAAATCCAA+AGG 0.642760 1.1:-35897409 None:intergenic
CGTTGAGCTCGACGTATCCG+CGG 0.658605 1.1:+35897285 MS.gene073684:CDS
GCTCAACGGCTACGGCGCGG+AGG 0.662193 1.1:-35897270 None:intergenic
CGAGACAGAAGTCGTATCCG+AGG 0.665178 1.1:-35897141 None:intergenic
TGGCCTCAACATGCTTACAA+AGG 0.669846 1.1:+35897603 MS.gene073684:CDS
GCATAAGCTAGATGACAAAG+TGG 0.673476 1.1:+35897093 MS.gene073684:CDS
CGAGCTCAACGGCTACGGCG+CGG 0.687740 1.1:-35897273 None:intergenic
CATAAGCAACAGCACCAGAG+AGG 0.690788 1.1:-35897567 None:intergenic
GAAGTCGTATCCGAGGCCGG+AGG 0.715985 1.1:-35897134 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGATAAATAAAAAAGAA+AGG - chr1.1:35898261-35898280 None:intergenic 10.0%
!! AATTATCTATTAATTATTAC+AGG + chr1.1:35899592-35899611 MS.gene073684:intron 10.0%
!! ATTATCTATTAATTATTACA+GGG + chr1.1:35899593-35899612 MS.gene073684:intron 10.0%
!! TAAAATGTTAAAAGCAAATA+GGG - chr1.1:35899191-35899210 None:intergenic 15.0%
!! TTAAAATGTTAAAAGCAAAT+AGG - chr1.1:35899192-35899211 None:intergenic 15.0%
!!! AATTTCTTCTAAATTTGTTT+TGG + chr1.1:35899507-35899526 MS.gene073684:intron 15.0%
!!! AGTAATGGAATTAATAAATA+AGG + chr1.1:35897921-35897940 MS.gene073684:intron 15.0%
!!! ATTTTAATTAGAACCTAATT+TGG + chr1.1:35898635-35898654 MS.gene073684:intron 15.0%
!!! GTTTAATTTGAAATCTAATT+TGG + chr1.1:35898778-35898797 MS.gene073684:intron 15.0%
!! AAAAATTAGTACAAAAAGCT+TGG + chr1.1:35899851-35899870 MS.gene073684:CDS 20.0%
!! AAGACACTAAACTAAATATA+TGG - chr1.1:35897955-35897974 None:intergenic 20.0%
!! AGACACTAAACTAAATATAT+GGG - chr1.1:35897954-35897973 None:intergenic 20.0%
!! ATTAATATTTCTTCAACTTC+TGG + chr1.1:35897529-35897548 MS.gene073684:CDS 20.0%
!! TATTCATAATGATTAAACAG+CGG + chr1.1:35899713-35899732 MS.gene073684:intron 20.0%
!!! CAATTTTAAATATCATCCAT+TGG + chr1.1:35898318-35898337 MS.gene073684:intron 20.0%
!!! GTTTTTAAAACTAACTTAAC+TGG + chr1.1:35897442-35897461 MS.gene073684:CDS 20.0%
!!! TATATTTAGTTTAGTGTCTT+AGG + chr1.1:35897955-35897974 MS.gene073684:intron 20.0%
!!! TCTCATATACTTTTACATTT+AGG + chr1.1:35899041-35899060 MS.gene073684:intron 20.0%
! AAAATGATAATCAATAGCCA+GGG + chr1.1:35899392-35899411 MS.gene073684:intron 25.0%
! AATTAAACTCATAATCCCAA+CGG - chr1.1:35898766-35898785 None:intergenic 25.0%
! ACAATATTAATCGTAACACA+CGG - chr1.1:35897755-35897774 None:intergenic 25.0%
! ACAATTATGCAATCTAGTAT+TGG + chr1.1:35897666-35897685 MS.gene073684:intron 25.0%
! ACATATGCCATATAAATGTT+AGG - chr1.1:35898478-35898497 None:intergenic 25.0%
! AGCATTTACTAGCAATTAAA+AGG - chr1.1:35899353-35899372 None:intergenic 25.0%
! ATGTTAGAACATGAAAGTTT+GGG + chr1.1:35898494-35898513 MS.gene073684:intron 25.0%
! CAAATAGGGAAGAATAAAAA+GGG - chr1.1:35899177-35899196 None:intergenic 25.0%
! CATATGCCATATAAATGTTA+GGG - chr1.1:35898477-35898496 None:intergenic 25.0%
! CATTTACTAGCAATTAAAAG+GGG - chr1.1:35899351-35899370 None:intergenic 25.0%
! GCATTTACTAGCAATTAAAA+GGG - chr1.1:35899352-35899371 None:intergenic 25.0%
! TATATTTCGTGATCTTATGT+TGG + chr1.1:35899422-35899441 MS.gene073684:intron 25.0%
! TATGTTAGAACATGAAAGTT+TGG + chr1.1:35898493-35898512 MS.gene073684:intron 25.0%
! TGCATTTCTATCTATAGAAT+CGG - chr1.1:35897782-35897801 None:intergenic 25.0%
! TGTACATATAACCAAAATCA+AGG + chr1.1:35897714-35897733 MS.gene073684:intron 25.0%
!! ATTTCTGATTTGAAAATTCC+AGG - chr1.1:35899826-35899845 None:intergenic 25.0%
!! GGTAACAATTTTATTGTTGA+TGG + chr1.1:35899985-35900004 MS.gene073684:CDS 25.0%
!! TTTCATTTTGCATCTTCATT+CGG + chr1.1:35899149-35899168 MS.gene073684:intron 25.0%
!!! AACAATTTTATTGTTGATGG+TGG + chr1.1:35899988-35900007 MS.gene073684:CDS 25.0%
ATAGATAGAAATGCAGTTGT+TGG + chr1.1:35897787-35897806 MS.gene073684:intron 30.0%
ATAGTTGGGAAATCAAGTAA+TGG + chr1.1:35897906-35897925 MS.gene073684:intron 30.0%
ATATGACATAGGTAGTTACT+TGG + chr1.1:35898883-35898902 MS.gene073684:intron 30.0%
ATCTAGTAACATGTAGGAAT+TGG + chr1.1:35898531-35898550 MS.gene073684:intron 30.0%
ATTCAGAAGAATCGTGAATT+AGG - chr1.1:35899957-35899976 None:intergenic 30.0%
CAAAATGATAATCAATAGCC+AGG + chr1.1:35899391-35899410 MS.gene073684:intron 30.0%
CAACAAATGTAAAGATGCAA+TGG - chr1.1:35899217-35899236 None:intergenic 30.0%
CAATGTATCAATATGTCCAA+AGG - chr1.1:35897353-35897372 None:intergenic 30.0%
CATATAAATGTTAGGGTCAA+AGG - chr1.1:35898470-35898489 None:intergenic 30.0%
CATCAAATCAACCATCTATA+CGG + chr1.1:35897232-35897251 MS.gene073684:CDS 30.0%
CGTCGGTAAGTTATAAATTA+CGG - chr1.1:35897885-35897904 None:intergenic 30.0%
CTCATATGTTGAATCAAGAT+TGG - chr1.1:35898682-35898701 None:intergenic 30.0%
CTTTGACCCTAACATTTATA+TGG + chr1.1:35898468-35898487 MS.gene073684:intron 30.0%
GCAAATAGGGAAGAATAAAA+AGG - chr1.1:35899178-35899197 None:intergenic 30.0%
GTAACTACCTATGTCATATT+TGG - chr1.1:35898882-35898901 None:intergenic 30.0%
TAACAGATCTAGTAACATGT+AGG + chr1.1:35898525-35898544 MS.gene073684:intron 30.0%
TATTCAGACTTCACCAAATT+AGG - chr1.1:35898651-35898670 None:intergenic 30.0%
TCAACATATGAGATCTTTGA+CGG + chr1.1:35898690-35898709 MS.gene073684:intron 30.0%
TCAGAAATGTCATATACACT+TGG + chr1.1:35898411-35898430 MS.gene073684:intron 30.0%
TTCAATTTGAACACAAGTTG+AGG - chr1.1:35897827-35897846 None:intergenic 30.0%
! AAACTAACTTAACTGGTTCT+TGG + chr1.1:35897449-35897468 MS.gene073684:CDS 30.0%
! AATAAACCCTTTGAGAAGTT+TGG + chr1.1:35899894-35899913 MS.gene073684:CDS 30.0%
! ACGAAATATATTTTTCTCCC+TGG - chr1.1:35899412-35899431 None:intergenic 30.0%
! ACTAAACTCAACCTTGATTT+TGG - chr1.1:35897728-35897747 None:intergenic 30.0%
! GAAATCTAATTTGGTGAAGT+CGG + chr1.1:35898787-35898806 MS.gene073684:intron 30.0%
! GATACATTGATTAACAATGC+TGG + chr1.1:35897364-35897383 MS.gene073684:CDS 30.0%
!! AACCACAATTTCAAGTTACT+CGG - chr1.1:35898108-35898127 None:intergenic 30.0%
!! GAGTTTGTTGATTGATGAAA+AGG - chr1.1:35899023-35899042 None:intergenic 30.0%
!!! ATGCAATCTAGTATTGGTTT+TGG + chr1.1:35897672-35897691 MS.gene073684:intron 30.0%
!!! TGTAGGTCTAATTTGCTTTT+AGG + chr1.1:35898034-35898053 MS.gene073684:intron 30.0%
AAACACTGCTAACACGAAAA+TGG - chr1.1:35899116-35899135 None:intergenic 35.0%
AAGCAACCAAACTTCTCAAA+GGG - chr1.1:35899903-35899922 None:intergenic 35.0%
ACAAGTGGTATCAAAGTTGA+TGG + chr1.1:35898074-35898093 MS.gene073684:intron 35.0%
ACTTGAAATTGTGGTTAGTG+TGG + chr1.1:35898112-35898131 MS.gene073684:intron 35.0%
AGAGTGAATTCAATATCTCC+TGG + chr1.1:35899805-35899824 MS.gene073684:CDS 35.0%
AGCAACAAAACACTAAGAAC+AGG - chr1.1:35898003-35898022 None:intergenic 35.0%
AGTTTAGATCTGCTCCATTT+AGG - chr1.1:35898392-35898411 None:intergenic 35.0%
ATAAATGTTAGGGTCAAAGG+AGG - chr1.1:35898467-35898486 None:intergenic 35.0%
ATAACTTACCGACGTATAGT+TGG + chr1.1:35897891-35897910 MS.gene073684:intron 35.0%
ATAGATAAGGCTTCTTGTCA+AGG + chr1.1:35898913-35898932 MS.gene073684:intron 35.0%
ATCAACCATCTATACGGTAA+CGG + chr1.1:35897238-35897257 MS.gene073684:CDS 35.0%
ATGCGGCAAAAAAAATCCAA+TGG - chr1.1:35898337-35898356 None:intergenic 35.0%
ATGTGTGATGCACACATAAA+GGG + chr1.1:35897499-35897518 MS.gene073684:CDS 35.0%
CAACTTTGATACCACTTGTT+GGG - chr1.1:35898073-35898092 None:intergenic 35.0%
CGATTCTTCTGAATATGTCA+CGG + chr1.1:35899963-35899982 MS.gene073684:CDS 35.0%
CGTAGATCCAAATATGACAT+AGG + chr1.1:35898872-35898891 MS.gene073684:intron 35.0%
CTCAATTGTTGCATCATGAT+TGG - chr1.1:35898825-35898844 None:intergenic 35.0%
CTTGAAATTGTGGTTAGTGT+GGG + chr1.1:35898113-35898132 MS.gene073684:intron 35.0%
GAAATGTCATATACACTTGG+TGG + chr1.1:35898414-35898433 MS.gene073684:intron 35.0%
GATTCTTCTGAATATGTCAC+GGG + chr1.1:35899964-35899983 MS.gene073684:CDS 35.0%
GCAATTAAAAGGGGCTTATT+TGG - chr1.1:35899342-35899361 None:intergenic 35.0%
GTGTTGTCCATTTAGATGTA+TGG - chr1.1:35898369-35898388 None:intergenic 35.0%
GTTATGATAGCAAGTAGAGA+AGG + chr1.1:35897857-35897876 MS.gene073684:intron 35.0%
GTTTAGATCTGCTCCATTTA+GGG - chr1.1:35898391-35898410 None:intergenic 35.0%
TAAATGGACAACACCCTAAA+TGG + chr1.1:35898375-35898394 MS.gene073684:intron 35.0%
TAACTTACCGACGTATAGTT+GGG + chr1.1:35897892-35897911 MS.gene073684:intron 35.0%
TAGACGAACACTTAATTACC+AGG - chr1.1:35899568-35899587 None:intergenic 35.0%
TATGTGTGATGCACACATAA+AGG + chr1.1:35897498-35897517 MS.gene073684:CDS 35.0%
TCAACTTTGATACCACTTGT+TGG - chr1.1:35898074-35898093 None:intergenic 35.0%
TCATCTTCAGACAAATCCAA+AGG - chr1.1:35897412-35897431 None:intergenic 35.0%
TGGATTTGTCTGAAGATGAA+TGG + chr1.1:35897413-35897432 MS.gene073684:CDS 35.0%
TGTGCATCCATACATCTAAA+TGG + chr1.1:35898359-35898378 MS.gene073684:intron 35.0%
TTACCTTTGTAAGCATGTTG+AGG - chr1.1:35897609-35897628 None:intergenic 35.0%
TTGATTTCCCAACTATACGT+CGG - chr1.1:35897902-35897921 None:intergenic 35.0%
TTGTCTGAATGAAGTGAAAC+CGG - chr1.1:35898951-35898970 None:intergenic 35.0%
TTTGAGAAGTTTGGTTGCTT+CGG + chr1.1:35899903-35899922 MS.gene073684:CDS 35.0%
TTTGTCCAATGATGTTTGAC+AGG + chr1.1:35899750-35899769 MS.gene073684:intron 35.0%
! AACTTTGATACCACTTGTTG+GGG - chr1.1:35898072-35898091 None:intergenic 35.0%
! ACTTGGAGTGTCTATAGATA+AGG + chr1.1:35898900-35898919 MS.gene073684:intron 35.0%
! ATTAACAATGCTGGTGTTAG+AGG + chr1.1:35897373-35897392 MS.gene073684:CDS 35.0%
! TAACTTAACTGGTTCTTGGT+TGG + chr1.1:35897453-35897472 MS.gene073684:CDS 35.0%
! TGTTGCTTATGCATCTTCAA+AGG + chr1.1:35897579-35897598 MS.gene073684:CDS 35.0%
!! AGGAAGTGTTAAATCTCCTT+TGG + chr1.1:35897393-35897412 MS.gene073684:CDS 35.0%
!! CGTATAGATGGTTGATTTGA+TGG - chr1.1:35897234-35897253 None:intergenic 35.0%
!! CTTCAACTTCTGGTTTGAAT+CGG + chr1.1:35897539-35897558 MS.gene073684:CDS 35.0%
!! GTTCTTAGTGTTTTGTTGCT+CGG + chr1.1:35898003-35898022 MS.gene073684:intron 35.0%
!! TTCAACTTCTGGTTTGAATC+GGG + chr1.1:35897540-35897559 MS.gene073684:CDS 35.0%
!!! TTGTTTTGGTCTTAACCCTT+CGG + chr1.1:35899521-35899540 MS.gene073684:intron 35.0%
ATAAATCGGTACACCAGGTA+AGG - chr1.1:35900019-35900038 None:intergenic 40.0%
ATGTATGGATGCACAACATG+CGG - chr1.1:35898354-35898373 None:intergenic 40.0%
CAATGATGTTTGACAGGTCA+TGG + chr1.1:35899756-35899775 MS.gene073684:intron 40.0%
CATGACCTGTCAAACATCAT+TGG - chr1.1:35899758-35899777 None:intergenic 40.0%
CTCCATTTCACAGTTGCTTA+AGG - chr1.1:35899452-35899471 None:intergenic 40.0%
CTTAAGCAACTGTGAAATGG+AGG + chr1.1:35899450-35899469 MS.gene073684:intron 40.0%
GAAGAATAAATCGGTACACC+AGG - chr1.1:35900024-35900043 None:intergenic 40.0%
GAAGCAACCAAACTTCTCAA+AGG - chr1.1:35899904-35899923 None:intergenic 40.0%
GCAAATTAGACCTACACCAA+TGG - chr1.1:35898030-35898049 None:intergenic 40.0%
GCAATTGACAAGTGCAGAAA+AGG - chr1.1:35899279-35899298 None:intergenic 40.0%
GCATAAGCTAGATGACAAAG+TGG + chr1.1:35897093-35897112 MS.gene073684:CDS 40.0%
GGTTCCTAAGGAAAAGAAAG+AGG + chr1.1:35899542-35899561 MS.gene073684:intron 40.0%
TGATGCACACATAAAGGGTT+CGG + chr1.1:35897504-35897523 MS.gene073684:CDS 40.0%
TGCCGAGTAACTTGAAATTG+TGG + chr1.1:35898103-35898122 MS.gene073684:intron 40.0%
TGCCTTAAGCAACTGTGAAA+TGG + chr1.1:35899447-35899466 MS.gene073684:intron 40.0%
TGTCTGAATGAAGTGAAACC+GGG - chr1.1:35898950-35898969 None:intergenic 40.0%
! ACTTTGATACCACTTGTTGG+GGG - chr1.1:35898071-35898090 None:intergenic 40.0%
! GACAAAGTGGTGTTAGTAAC+CGG + chr1.1:35897106-35897125 MS.gene073684:CDS 40.0%
! TCTTTTCCTTAGGAACCGAA+GGG - chr1.1:35899539-35899558 None:intergenic 40.0%
! TTCTTTTCCTTAGGAACCGA+AGG - chr1.1:35899540-35899559 None:intergenic 40.0%
! TTGCTACTAACCTAGGGTTT+TGG + chr1.1:35898137-35898156 MS.gene073684:intron 40.0%
! TTGTCATCTAGCTTATGCCA+TGG - chr1.1:35897091-35897110 None:intergenic 40.0%
!! AGAAATGCAGTTGTTGGCTT+TGG + chr1.1:35897793-35897812 MS.gene073684:intron 40.0%
!! ATGGTTGATTTGATGGCAGA+GGG - chr1.1:35897227-35897246 None:intergenic 40.0%
!! TCAACTTCTGGTTTGAATCG+GGG + chr1.1:35897541-35897560 MS.gene073684:CDS 40.0%
!! TGGTATCAAAGTTGATGGCT+TGG + chr1.1:35898079-35898098 MS.gene073684:intron 40.0%
AAAGGAGGATTTGCACCAGT+GGG - chr1.1:35898452-35898471 None:intergenic 45.0%
AACTCATAATCCCAACGGTC+TGG - chr1.1:35898761-35898780 None:intergenic 45.0%
AAGAAGTAGAGCTAGAGCCA+TGG + chr1.1:35897071-35897090 MS.gene073684:CDS 45.0%
AGCCATGTTGTTAGGCACTT+TGG + chr1.1:35898160-35898179 MS.gene073684:intron 45.0%
AGTCTGCACATCTTGGTTGT+TGG + chr1.1:35898585-35898604 MS.gene073684:intron 45.0%
CTAAGGAAAAGAAAGAGGCC+TGG + chr1.1:35899547-35899566 MS.gene073684:intron 45.0%
CTGCTAACACGAAAATGGCA+AGG - chr1.1:35899111-35899130 None:intergenic 45.0%
GCTTATGCATCTTCAAAGGC+TGG + chr1.1:35897583-35897602 MS.gene073684:CDS 45.0%
GGCTTATTTGGACATGTTCG+GGG - chr1.1:35899330-35899349 None:intergenic 45.0%
GGGCTTATTTGGACATGTTC+GGG - chr1.1:35899331-35899350 None:intergenic 45.0%
GGGGCTTATTTGGACATGTT+CGG - chr1.1:35899332-35899351 None:intergenic 45.0%
GGTTTCCGTTACCGTATAGA+TGG - chr1.1:35897246-35897265 None:intergenic 45.0%
TCTTAACCCTTCGGTTCCTA+AGG + chr1.1:35899530-35899549 MS.gene073684:intron 45.0%
TGCATTAAGACCAGACCGTT+GGG + chr1.1:35898748-35898767 MS.gene073684:intron 45.0%
TGGCCTCAACATGCTTACAA+AGG + chr1.1:35897603-35897622 MS.gene073684:CDS 45.0%
TGTTTGACAGGTCATGGCTT+TGG + chr1.1:35899762-35899781 MS.gene073684:intron 45.0%
TTGCAGGGAAAGATGGAAGA+GGG + chr1.1:35898227-35898246 MS.gene073684:intron 45.0%
TTGCATTAAGACCAGACCGT+TGG + chr1.1:35898747-35898766 MS.gene073684:intron 45.0%
TTGCTTCACAACGTGACAAG+AGG - chr1.1:35898195-35898214 None:intergenic 45.0%
TTTCCCTGCAAACGCAAACA+CGG - chr1.1:35898218-35898237 None:intergenic 45.0%
TTTGCAGGGAAAGATGGAAG+AGG + chr1.1:35898226-35898245 MS.gene073684:intron 45.0%
TTTGCGTTTGCAGGGAAAGA+TGG + chr1.1:35898220-35898239 MS.gene073684:intron 45.0%
! AGCCAAAGTGCCTAACAACA+TGG - chr1.1:35898165-35898184 None:intergenic 45.0%
! CAGGCCTCTTTCTTTTCCTT+AGG - chr1.1:35899549-35899568 None:intergenic 45.0%
! CTTTGATACCACTTGTTGGG+GGG - chr1.1:35898070-35898089 None:intergenic 45.0%
! GGCTTCTTGTCAAGGTGTTA+AGG + chr1.1:35898921-35898940 MS.gene073684:intron 45.0%
!! ACAGGTCATGGCTTTGGAAT+TGG + chr1.1:35899768-35899787 MS.gene073684:intron 45.0%
!! CAGGTCATGGCTTTGGAATT+GGG + chr1.1:35899769-35899788 MS.gene073684:intron 45.0%
!! GATGGTTGATTTGATGGCAG+AGG - chr1.1:35897228-35897247 None:intergenic 45.0%
!! GTGGGTTTGCTACTAACCTA+GGG + chr1.1:35898131-35898150 MS.gene073684:intron 45.0%
!! TGTGGGTTTGCTACTAACCT+AGG + chr1.1:35898130-35898149 MS.gene073684:intron 45.0%
!! TGTTTTGTTGCTCGGTCCAT+TGG + chr1.1:35898011-35898030 MS.gene073684:intron 45.0%
!!! GGTTTTGGAGCCATGTTGTT+AGG + chr1.1:35898152-35898171 MS.gene073684:intron 45.0%
CAAAGGAGGATTTGCACCAG+TGG - chr1.1:35898453-35898472 None:intergenic 50.0%
CAACATGGCTCCAAAACCCT+AGG - chr1.1:35898150-35898169 None:intergenic 50.0%
CAACCGTGTTTGCGTTTGCA+GGG + chr1.1:35898212-35898231 MS.gene073684:intron 50.0%
CATAAGCAACAGCACCAGAG+AGG - chr1.1:35897570-35897589 None:intergenic 50.0%
CCAAGATGTGCAGACTACAG+TGG - chr1.1:35898581-35898600 None:intergenic 50.0%
CCACTGTAGTCTGCACATCT+TGG + chr1.1:35898578-35898597 MS.gene073684:intron 50.0%
TGTCTCGATCTCGCTAAAGC+CGG + chr1.1:35897157-35897176 MS.gene073684:CDS 50.0%
TTGAATCGGGGAAACCTCTC+TGG + chr1.1:35897553-35897572 MS.gene073684:CDS 50.0%
! ATACCACTTGTTGGGGGGTT+TGG - chr1.1:35898065-35898084 None:intergenic 50.0%
! GGATCCTGCATTGACATCTC+TGG + chr1.1:35899924-35899943 MS.gene073684:CDS 50.0%
! GTCAAGGTGTTAAGGATGCC+CGG + chr1.1:35898929-35898948 MS.gene073684:intron 50.0%
! TGATTTGATGGCAGAGGGAG+TGG - chr1.1:35897222-35897241 None:intergenic 50.0%
ACAGAAGTCGTATCCGAGGC+CGG - chr1.1:35897140-35897159 None:intergenic 55.0%
CATCGACAAGTCCGTGCAGA+AGG + chr1.1:35897318-35897337 MS.gene073684:CDS 55.0%
CGAGACAGAAGTCGTATCCG+AGG - chr1.1:35897144-35897163 None:intergenic 55.0%
CGAGCCAGAGATGTCAATGC+AGG - chr1.1:35899931-35899950 None:intergenic 55.0%
CTTCTGCACGGACTTGTCGA+TGG - chr1.1:35897320-35897339 None:intergenic 55.0%
GCAACCGTGTTTGCGTTTGC+AGG + chr1.1:35898211-35898230 MS.gene073684:intron 55.0%
GTTGCTCGGTCCATTGGTGT+AGG + chr1.1:35898017-35898036 MS.gene073684:intron 55.0%
TACGTCGAGCTCAACGGCTA+CGG - chr1.1:35897281-35897300 None:intergenic 55.0%
TCTCCAAACCCCCCAACAAG+TGG + chr1.1:35898059-35898078 MS.gene073684:intron 55.0%
TGTGCAGACTACAGTGGCTG+CGG - chr1.1:35898575-35898594 None:intergenic 55.0%
TTAGTAACCGGCGCATCCTC+CGG + chr1.1:35897118-35897137 MS.gene073684:CDS 55.0%
! TTTGATGGCAGAGGGAGTGG+AGG - chr1.1:35897219-35897238 None:intergenic 55.0%
!! GATGGTGGAGCAACCTTACC+TGG + chr1.1:35900003-35900022 MS.gene073684:CDS 55.0%
!! TGGTTTGTTCCTCGACCCAC+TGG + chr1.1:35898434-35898453 MS.gene073684:intron 55.0%
ACAAGTCCGTGCAGAAGGCG+TGG + chr1.1:35897323-35897342 MS.gene073684:CDS 60.0%
AGCGGCAACGATTCTGCAGC+CGG - chr1.1:35897179-35897198 None:intergenic 60.0%
CGCGGATACGTCGAGCTCAA+CGG - chr1.1:35897287-35897306 None:intergenic 60.0%
CGTTGAGCTCGACGTATCCG+CGG + chr1.1:35897285-35897304 MS.gene073684:CDS 60.0%
GGATTTGCACCAGTGGGTCG+AGG - chr1.1:35898446-35898465 None:intergenic 60.0%
GTGCAGACTACAGTGGCTGC+GGG - chr1.1:35898574-35898593 None:intergenic 60.0%
! CAAGTCCGTGCAGAAGGCGT+GGG + chr1.1:35897324-35897343 MS.gene073684:CDS 60.0%
! CAGAAGGCGTGGGATGCCTT+TGG + chr1.1:35897334-35897353 MS.gene073684:CDS 60.0%
GAAGTCGTATCCGAGGCCGG+AGG - chr1.1:35897137-35897156 None:intergenic 65.0%
GAGCTCGACGTATCCGCGGA+CGG + chr1.1:35897289-35897308 MS.gene073684:CDS 65.0%
GATGGCAGAGGGAGTGGAGG+CGG - chr1.1:35897216-35897235 None:intergenic 65.0%
GGCATCCCACGCCTTCTGCA+CGG - chr1.1:35897332-35897351 None:intergenic 65.0%
CGAGCTCAACGGCTACGGCG+CGG - chr1.1:35897276-35897295 None:intergenic 70.0%
GGGAGTGGAGGCGGTCGAGA+CGG - chr1.1:35897207-35897226 None:intergenic 70.0%
!! GTCGATGGAAGCGCCGTCCG+CGG - chr1.1:35897305-35897324 None:intergenic 70.0%
ACCGGCGCATCCTCCGGCCT+CGG + chr1.1:35897124-35897143 MS.gene073684:CDS 75.0%
CGGCTACGGCGCGGAGGTTG+AGG - chr1.1:35897267-35897286 None:intergenic 75.0%
GCGGTCGAGACGGCGAGCAG+CGG - chr1.1:35897197-35897216 None:intergenic 75.0%
GCTCAACGGCTACGGCGCGG+AGG - chr1.1:35897273-35897292 None:intergenic 75.0%
TCCGAGGCCGGAGGATGCGC+CGG - chr1.1:35897128-35897147 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 35897061 35900050 35897061 ID=MS.gene073684
chr1.1 mRNA 35897061 35900050 35897061 ID=MS.gene073684.t1;Parent=MS.gene073684
chr1.1 exon 35897061 35897624 35897061 ID=MS.gene073684.t1.exon1;Parent=MS.gene073684.t1
chr1.1 CDS 35897061 35897624 35897061 ID=cds.MS.gene073684.t1;Parent=MS.gene073684.t1
chr1.1 exon 35899772 35900050 35899772 ID=MS.gene073684.t1.exon2;Parent=MS.gene073684.t1
chr1.1 CDS 35899772 35900050 35899772 ID=cds.MS.gene073684.t1;Parent=MS.gene073684.t1
Gene Sequence

>MS.gene073684

ATGGGAAGAGAAGAAGTAGAGCTAGAGCCATGGCATAAGCTAGATGACAAAGTGGTGTTAGTAACCGGCGCATCCTCCGGCCTCGGATACGACTTCTGTCTCGATCTCGCTAAAGCCGGCTGCAGAATCGTTGCCGCTGCTCGCCGTCTCGACCGCCTCCACTCCCTCTGCCATCAAATCAACCATCTATACGGTAACGGAAACCTCAACCTCCGCGCCGTAGCCGTTGAGCTCGACGTATCCGCGGACGGCGCTTCCATCGACAAGTCCGTGCAGAAGGCGTGGGATGCCTTTGGACATATTGATACATTGATTAACAATGCTGGTGTTAGAGGAAGTGTTAAATCTCCTTTGGATTTGTCTGAAGATGAATGGAATCATGTTTTTAAAACTAACTTAACTGGTTCTTGGTTGGTTTCAAAATATGTATGTAAACGTATGTGTGATGCACACATAAAGGGTTCGGTTATTAATATTTCTTCAACTTCTGGTTTGAATCGGGGAAACCTCTCTGGTGCTGTTGCTTATGCATCTTCAAAGGCTGGCCTCAACATGCTTACAAAGGTAATTGTTTTTTCTTTACATTTCATCGTATTTTTTTGCTTACAATTATGCAATCTAGTATTGGTTTTGGATGAGAGTTATCACTATATTGTACATATAACCAAAATCAAGGTTGAGTTTAGTTTAGCCGTGTGTTACGATTAATATTGTAATGCCGATTCTATAGATAGAAATGCAGTTGTTGGCTTTGGCAAAAGAACCTCAACTTGTGTTCAAATTGAATAGCAACAATGTTATGATAGCAAGTAGAGAAGGATCCGTAATTTATAACTTACCGACGTATAGTTGGGAAATCAAGTAATGGAATTAATAAATAAGGAGTTAGACCCATATATTTAGTTTAGTGTCTTAGGAATTTGAGTGAAGATTCAGTGACCTGTTCTTAGTGTTTTGTTGCTCGGTCCATTGGTGTAGGTCTAATTTGCTTTTAGGCTTCTCCAAACCCCCCAACAAGTGGTATCAAAGTTGATGGCTTGGCTGCCGAGTAACTTGAAATTGTGGTTAGTGTGGGTTTGCTACTAACCTAGGGTTTTGGAGCCATGTTGTTAGGCACTTTGGCTCTTTGAACCTCTTGTCACGTTGTGAAGCAACCGTGTTTGCGTTTGCAGGGAAAGATGGAAGAGGGATCTGTGTCCTTTCTTTTTTATTTATCTATTTTTTTTAAAAAAATTATATTAAAAGATGCTTAATTTTCAATTTTAAATATCATCCATTGGATTTTTTTTGCCGCATGTTGTGCATCCATACATCTAAATGGACAACACCCTAAATGGAGCAGATCTAAACTCAGAAATGTCATATACACTTGGTGGTTTGTTCCTCGACCCACTGGTGCAAATCCTCCTTTGACCCTAACATTTATATGGCATATGTTAGAACATGAAAGTTTGGGAAGTTATCTAACAGATCTAGTAACATGTAGGAATTGGATTAGATATCAAAACTTCCCGCAGCCACTGTAGTCTGCACATCTTGGTTGTTGGATTAACATCAGACGATTTGTATTCGTAATTTTAATTAGAACCTAATTTGGTGAAGTCTGAATACAAATGATCCAATCTTGATTCAACATATGAGATCTTTGACGGCACTGTAGTCACTACAGTTTTCTCAATTTTGTTGTTGCATTAAGACCAGACCGTTGGGATTATGAGTTTAATTTGAAATCTAATTTGGTGAAGTCGGAATATAAACTTTCCAATCATGATGCAACAATTGAGATCGATGACTGCAGTTACTGCTGACATCGTAGATCCAAATATGACATAGGTAGTTACTTGGAGTGTCTATAGATAAGGCTTCTTGTCAAGGTGTTAAGGATGCCCGGTTTCACTTCATTCAGACAAACTAAAATTGACTGATTCAAGTTCATTTATCGACGATTATAATCATTGTCCTTTTCATCAATCAACAAACTCTCATATACTTTTACATTTAGGTACTTTAAATCTCGTTAATTCGATTGTTGCACGCTTATTATCTTCCTTGCCATTTTCGTGTTAGCAGTGTTTATCTCTTGCAAATTTTCATTTTGCATCTTCATTCGGTGCCCTTTTTATTCTTCCCTATTTGCTTTTAACATTTTAATGCCATTGCATCTTTACATTTGTTGTCAATTACTTTCAGTTTATAATTTCTGCACTTGACATCTCCTTTTCTGCACTTGTCAATTGCTGCAGCGTTAAGTTTCTGCACTTGACATCCCCGAACATGTCCAAATAAGCCCCTTTTAATTGCTAGTAAATGCTGTATTAATCAAGAAAAAACAAAATGATAATCAATAGCCAGGGAGAAAAATATATTTCGTGATCTTATGTTGGCATGCCTTAAGCAACTGTGAAATGGAGGAGTTGAACACTATGTAAATCAATTCTACGTGTTAAATTTCTTCTAAATTTGTTTTGGTCTTAACCCTTCGGTTCCTAAGGAAAAGAAAGAGGCCTGGTAATTAAGTGTTCGTCTAAAAAAATTATCTATTAATTATTACAGGGTTTAGAGTTCAGAAGTTCACATGTTAATTCATAGACAAAAGTAAAAAACAATTAACTTATAGCTCTGTAAAATGTTCAATTTGTCATTTACTGATTATATTCATAATGATTAAACAGCGGCATATTAAAATCATTTTGTCCAATGATGTTTGACAGGTCATGGCTTTGGAATTGGGTGCACACAAAATTAGAGTGAATTCAATATCTCCTGGAATTTTCAAATCAGAAATCACTGAAAAATTAGTACAAAAAGCTTGGCTGAATAATGTGATCACGAAAATAAACCCTTTGAGAAGTTTGGTTGCTTCGGATCCTGCATTGACATCTCTGGCTCGTTACCTAATTCACGATTCTTCTGAATATGTCACGGGTAACAATTTTATTGTTGATGGTGGAGCAACCTTACCTGGTGTACCGATTTATTCTTCTTTGTAA
Protein sequence

>MS.gene073684.t1

MGREEVELEPWHKLDDKVVLVTGASSGLGYDFCLDLAKAGCRIVAAARRLDRLHSLCHQINHLYGNGNLNLRAVAVELDVSADGASIDKSVQKAWDAFGHIDTLINNAGVRGSVKSPLDLSEDEWNHVFKTNLTGSWLVSKYVCKRMCDAHIKGSVINISSTSGLNRGNLSGAVAYASSKAGLNMLTKVMALELGAHKIRVNSISPGIFKSEITEKLVQKAWLNNVITKINPLRSLVASDPALTSLARYLIHDSSEYVTGNNFIVDGGATLPGVPIYSSL