Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62193.t1 | XP_013460705.1 | 95.6 | 271 | 12 | 0 | 1 | 271 | 1 | 271 | 3.10E-141 | 511.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62193.t1 | Q9LHT0 | 69.4 | 258 | 79 | 0 | 12 | 269 | 6 | 263 | 3.1e-102 | 372.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62193.t1 | A0A072UY55 | 95.6 | 271 | 12 | 0 | 1 | 271 | 1 | 271 | 2.2e-141 | 511.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62193.t1 | MTR_3g068085 | 95.572 | 271 | 12 | 0 | 1 | 271 | 1 | 271 | 0.0 | 515 |
MS.gene62193.t1 | MTR_3g068070 | 88.636 | 264 | 30 | 0 | 1 | 264 | 1 | 264 | 3.02e-176 | 486 |
MS.gene62193.t1 | MTR_3g068065 | 84.766 | 256 | 39 | 0 | 15 | 270 | 17 | 272 | 1.72e-163 | 454 |
MS.gene62193.t1 | MTR_3g068155 | 77.068 | 266 | 61 | 0 | 6 | 271 | 10 | 275 | 1.05e-155 | 434 |
MS.gene62193.t1 | MTR_3g068175 | 73.626 | 273 | 70 | 1 | 1 | 271 | 1 | 273 | 4.74e-148 | 415 |
MS.gene62193.t1 | MTR_3g068175 | 72.563 | 277 | 70 | 2 | 1 | 271 | 1 | 277 | 8.62e-146 | 409 |
MS.gene62193.t1 | MTR_4g064883 | 62.109 | 256 | 97 | 0 | 12 | 267 | 11 | 266 | 5.54e-125 | 357 |
MS.gene62193.t1 | MTR_4g064887 | 60.687 | 262 | 103 | 0 | 1 | 262 | 1 | 262 | 5.73e-121 | 346 |
MS.gene62193.t1 | MTR_7g063320 | 60.700 | 257 | 97 | 1 | 9 | 261 | 9 | 265 | 3.41e-113 | 327 |
MS.gene62193.t1 | MTR_7g063270 | 61.240 | 258 | 97 | 1 | 6 | 260 | 7 | 264 | 1.73e-110 | 320 |
MS.gene62193.t1 | MTR_7g063390 | 60.000 | 260 | 100 | 2 | 6 | 261 | 7 | 266 | 4.50e-110 | 318 |
MS.gene62193.t1 | MTR_7g063360 | 60.769 | 260 | 98 | 2 | 6 | 261 | 7 | 266 | 6.06e-109 | 316 |
MS.gene62193.t1 | MTR_7g063330 | 58.175 | 263 | 107 | 1 | 1 | 260 | 1 | 263 | 3.63e-108 | 314 |
MS.gene62193.t1 | MTR_7g063260 | 59.073 | 259 | 102 | 1 | 6 | 260 | 7 | 265 | 7.96e-106 | 308 |
MS.gene62193.t1 | MTR_4g064887 | 61.244 | 209 | 81 | 0 | 1 | 209 | 1 | 209 | 3.73e-94 | 277 |
MS.gene62193.t1 | MTR_4g064883 | 63.131 | 198 | 73 | 0 | 12 | 209 | 11 | 208 | 3.74e-93 | 274 |
MS.gene62193.t1 | MTR_7g063270 | 51.163 | 258 | 74 | 3 | 6 | 260 | 7 | 215 | 4.08e-81 | 243 |
MS.gene62193.t1 | MTR_4g132850 | 32.114 | 246 | 162 | 4 | 15 | 259 | 7 | 248 | 6.99e-32 | 118 |
MS.gene62193.t1 | MTR_3g085740 | 30.081 | 246 | 161 | 5 | 21 | 261 | 81 | 320 | 5.99e-30 | 115 |
MS.gene62193.t1 | MTR_7g094510 | 31.890 | 254 | 159 | 7 | 15 | 259 | 6 | 254 | 1.46e-29 | 112 |
MS.gene62193.t1 | MTR_7g094520 | 32.422 | 256 | 155 | 9 | 15 | 259 | 11 | 259 | 1.25e-27 | 107 |
MS.gene62193.t1 | MTR_4g058810 | 30.651 | 261 | 168 | 9 | 14 | 264 | 10 | 267 | 1.47e-27 | 107 |
MS.gene62193.t1 | MTR_7g071680 | 31.560 | 282 | 155 | 8 | 8 | 260 | 22 | 294 | 2.00e-27 | 107 |
MS.gene62193.t1 | MTR_4g058840 | 29.730 | 259 | 171 | 7 | 15 | 264 | 11 | 267 | 1.77e-26 | 104 |
MS.gene62193.t1 | MTR_4g058820 | 29.730 | 259 | 171 | 7 | 15 | 264 | 11 | 267 | 1.77e-26 | 104 |
MS.gene62193.t1 | MTR_1196s0010 | 32.922 | 243 | 152 | 6 | 20 | 259 | 279 | 513 | 3.74e-25 | 104 |
MS.gene62193.t1 | MTR_7g083870 | 30.216 | 278 | 172 | 8 | 1 | 260 | 14 | 287 | 6.44e-24 | 98.6 |
MS.gene62193.t1 | MTR_4g131740 | 31.154 | 260 | 161 | 8 | 15 | 262 | 40 | 293 | 3.48e-23 | 96.3 |
MS.gene62193.t1 | MTR_4g052350 | 30.651 | 261 | 160 | 11 | 15 | 264 | 14 | 264 | 1.11e-22 | 94.4 |
MS.gene62193.t1 | MTR_3g020670 | 31.884 | 276 | 159 | 13 | 3 | 260 | 6 | 270 | 2.77e-21 | 90.9 |
MS.gene62193.t1 | MTR_4g052320 | 29.572 | 257 | 169 | 9 | 15 | 264 | 8 | 259 | 8.45e-21 | 89.4 |
MS.gene62193.t1 | MTR_7g107670 | 27.778 | 270 | 168 | 8 | 7 | 260 | 26 | 284 | 9.23e-21 | 89.7 |
MS.gene62193.t1 | MTR_6g023990 | 29.104 | 268 | 171 | 9 | 4 | 259 | 2 | 262 | 2.56e-20 | 88.2 |
MS.gene62193.t1 | MTR_6g023590 | 27.715 | 267 | 175 | 8 | 4 | 259 | 2 | 261 | 4.19e-20 | 87.4 |
MS.gene62193.t1 | MTR_7g113650 | 29.961 | 257 | 167 | 8 | 15 | 262 | 40 | 292 | 8.25e-20 | 87.0 |
MS.gene62193.t1 | MTR_4g078630 | 29.670 | 273 | 168 | 10 | 3 | 260 | 8 | 271 | 2.04e-19 | 85.9 |
MS.gene62193.t1 | MTR_4g052340 | 28.682 | 258 | 169 | 8 | 15 | 264 | 14 | 264 | 3.07e-19 | 85.1 |
MS.gene62193.t1 | MTR_3g068075 | 82.000 | 50 | 8 | 1 | 123 | 171 | 1 | 50 | 3.71e-19 | 80.1 |
MS.gene62193.t1 | MTR_8g442750 | 28.125 | 256 | 169 | 6 | 15 | 259 | 14 | 265 | 3.94e-19 | 85.5 |
MS.gene62193.t1 | MTR_4g052300 | 28.794 | 257 | 170 | 10 | 15 | 264 | 8 | 258 | 5.68e-19 | 84.3 |
MS.gene62193.t1 | MTR_1g082760 | 28.682 | 258 | 171 | 8 | 15 | 263 | 40 | 293 | 7.45e-19 | 84.3 |
MS.gene62193.t1 | MTR_4g058830 | 34.146 | 164 | 101 | 6 | 106 | 264 | 52 | 213 | 7.70e-19 | 83.2 |
MS.gene62193.t1 | MTR_1g068955 | 30.268 | 261 | 163 | 8 | 15 | 263 | 14 | 267 | 3.92e-18 | 82.4 |
MS.gene62193.t1 | MTR_1g051165 | 26.568 | 271 | 167 | 9 | 15 | 263 | 14 | 274 | 6.88e-18 | 81.6 |
MS.gene62193.t1 | MTR_6g023600 | 28.090 | 267 | 174 | 8 | 4 | 259 | 2 | 261 | 7.97e-18 | 81.3 |
MS.gene62193.t1 | MTR_6g023910 | 28.625 | 269 | 170 | 10 | 4 | 259 | 2 | 261 | 1.32e-17 | 80.5 |
MS.gene62193.t1 | MTR_7g105460 | 27.500 | 280 | 177 | 11 | 4 | 270 | 2 | 268 | 3.36e-17 | 79.7 |
MS.gene62193.t1 | MTR_6g023950 | 27.170 | 265 | 179 | 8 | 4 | 259 | 2 | 261 | 4.68e-17 | 79.0 |
MS.gene62193.t1 | MTR_7g105590 | 30.481 | 187 | 121 | 6 | 15 | 197 | 8 | 189 | 5.70e-17 | 77.4 |
MS.gene62193.t1 | MTR_6g023610 | 27.636 | 275 | 177 | 10 | 4 | 265 | 2 | 267 | 7.87e-17 | 78.6 |
MS.gene62193.t1 | MTR_5g098650 | 68.627 | 51 | 16 | 0 | 221 | 271 | 124 | 174 | 2.23e-16 | 75.1 |
MS.gene62193.t1 | MTR_7g105580 | 27.059 | 255 | 152 | 8 | 15 | 260 | 8 | 237 | 2.37e-16 | 77.0 |
MS.gene62193.t1 | MTR_2g090165 | 27.068 | 266 | 183 | 7 | 11 | 269 | 2 | 263 | 4.48e-16 | 76.3 |
MS.gene62193.t1 | MTR_6g023600 | 27.715 | 267 | 169 | 8 | 4 | 259 | 2 | 255 | 2.55e-15 | 73.9 |
MS.gene62193.t1 | MTR_7g110140 | 28.030 | 264 | 178 | 8 | 11 | 267 | 2 | 260 | 3.13e-15 | 73.9 |
MS.gene62193.t1 | MTR_7g110130 | 26.641 | 259 | 177 | 7 | 11 | 261 | 2 | 255 | 3.14e-15 | 73.9 |
MS.gene62193.t1 | MTR_8g089575 | 30.244 | 205 | 132 | 6 | 17 | 213 | 47 | 248 | 1.66e-14 | 72.4 |
MS.gene62193.t1 | MTR_7g110160 | 28.016 | 257 | 157 | 7 | 11 | 261 | 2 | 236 | 3.02e-14 | 70.9 |
MS.gene62193.t1 | MTR_1579s0020 | 35.227 | 88 | 56 | 1 | 181 | 268 | 1 | 87 | 4.96e-14 | 66.6 |
MS.gene62193.t1 | MTR_4g134660 | 30.814 | 172 | 110 | 4 | 19 | 184 | 10 | 178 | 5.79e-14 | 70.1 |
MS.gene62193.t1 | MTR_6g035395 | 26.667 | 255 | 166 | 6 | 12 | 261 | 2 | 240 | 3.02e-13 | 68.2 |
MS.gene62193.t1 | MTR_8g044240 | 27.477 | 222 | 145 | 7 | 21 | 233 | 75 | 289 | 4.04e-13 | 68.6 |
MS.gene62193.t1 | MTR_3g098470 | 35.135 | 148 | 93 | 3 | 8 | 154 | 25 | 170 | 4.43e-13 | 68.6 |
MS.gene62193.t1 | MTR_3g086210 | 27.461 | 193 | 135 | 3 | 17 | 204 | 53 | 245 | 5.33e-12 | 65.5 |
MS.gene62193.t1 | MTR_6g041980 | 34.247 | 146 | 84 | 5 | 15 | 154 | 64 | 203 | 8.52e-12 | 64.3 |
MS.gene62193.t1 | MTR_6g041980 | 30.144 | 209 | 122 | 6 | 15 | 205 | 64 | 266 | 1.27e-11 | 64.3 |
MS.gene62193.t1 | MTR_7g105570 | 28.191 | 188 | 116 | 7 | 94 | 270 | 46 | 225 | 1.58e-11 | 63.2 |
MS.gene62193.t1 | MTR_1275s0010 | 31.250 | 112 | 77 | 0 | 139 | 250 | 259 | 370 | 1.63e-11 | 64.3 |
MS.gene62193.t1 | MTR_3g113870 | 26.667 | 180 | 126 | 4 | 28 | 205 | 34 | 209 | 1.65e-11 | 63.2 |
MS.gene62193.t1 | MTR_7g080410 | 26.374 | 182 | 126 | 4 | 22 | 197 | 45 | 224 | 4.67e-11 | 62.4 |
MS.gene62193.t1 | MTR_7g080410 | 26.374 | 182 | 126 | 4 | 22 | 197 | 45 | 224 | 5.67e-11 | 62.0 |
MS.gene62193.t1 | MTR_3g087850 | 27.230 | 213 | 141 | 5 | 21 | 232 | 32 | 231 | 6.50e-11 | 62.0 |
MS.gene62193.t1 | MTR_1g031180 | 33.784 | 148 | 95 | 3 | 8 | 154 | 30 | 175 | 7.47e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62193.t1 | AT5G06060 | 69.380 | 258 | 79 | 0 | 12 | 269 | 6 | 263 | 7.03e-138 | 389 |
MS.gene62193.t1 | AT2G29260 | 61.176 | 255 | 99 | 0 | 12 | 266 | 65 | 319 | 6.60e-117 | 338 |
MS.gene62193.t1 | AT2G29290 | 59.922 | 257 | 101 | 1 | 12 | 266 | 4 | 260 | 9.53e-117 | 335 |
MS.gene62193.t1 | AT1G07440 | 60.075 | 268 | 101 | 3 | 1 | 266 | 1 | 264 | 1.94e-115 | 332 |
MS.gene62193.t1 | AT2G29150 | 60.377 | 265 | 103 | 2 | 1 | 264 | 1 | 264 | 4.14e-115 | 332 |
MS.gene62193.t1 | AT2G29360 | 59.387 | 261 | 106 | 0 | 4 | 264 | 5 | 265 | 7.51e-115 | 331 |
MS.gene62193.t1 | AT2G29350 | 59.470 | 264 | 106 | 1 | 1 | 264 | 1 | 263 | 4.91e-114 | 329 |
MS.gene62193.t1 | AT1G07450 | 59.684 | 253 | 101 | 1 | 12 | 264 | 5 | 256 | 3.35e-111 | 321 |
MS.gene62193.t1 | AT2G29330 | 60.853 | 258 | 97 | 3 | 12 | 266 | 4 | 260 | 2.92e-110 | 319 |
MS.gene62193.t1 | AT2G29340 | 57.529 | 259 | 108 | 1 | 12 | 268 | 4 | 262 | 2.69e-109 | 317 |
MS.gene62193.t1 | AT2G29340 | 57.977 | 257 | 106 | 1 | 12 | 266 | 4 | 260 | 7.15e-109 | 317 |
MS.gene62193.t1 | AT2G30670 | 58.893 | 253 | 104 | 0 | 12 | 264 | 4 | 256 | 2.70e-108 | 314 |
MS.gene62193.t1 | AT2G29370 | 55.172 | 261 | 117 | 0 | 4 | 264 | 5 | 265 | 1.86e-107 | 312 |
MS.gene62193.t1 | AT2G29320 | 58.755 | 257 | 103 | 2 | 13 | 266 | 11 | 267 | 1.61e-105 | 307 |
MS.gene62193.t1 | AT2G29310 | 57.312 | 253 | 108 | 0 | 12 | 264 | 4 | 256 | 3.55e-105 | 306 |
MS.gene62193.t1 | AT2G29290 | 58.403 | 238 | 97 | 1 | 31 | 266 | 6 | 243 | 3.37e-104 | 303 |
MS.gene62193.t1 | AT2G29300 | 56.977 | 258 | 108 | 2 | 12 | 266 | 4 | 261 | 5.07e-103 | 301 |
MS.gene62193.t1 | AT2G29300 | 56.800 | 250 | 107 | 1 | 12 | 260 | 4 | 253 | 1.45e-99 | 293 |
MS.gene62193.t1 | AT2G29350 | 59.111 | 225 | 91 | 1 | 40 | 264 | 2 | 225 | 2.06e-96 | 283 |
MS.gene62193.t1 | AT2G29320 | 57.741 | 239 | 98 | 2 | 31 | 266 | 11 | 249 | 6.54e-95 | 280 |
MS.gene62193.t1 | AT2G29310 | 55.983 | 234 | 103 | 0 | 31 | 264 | 21 | 254 | 4.69e-93 | 275 |
MS.gene62193.t1 | AT2G29350 | 60.784 | 204 | 80 | 0 | 1 | 204 | 1 | 204 | 6.74e-89 | 263 |
MS.gene62193.t1 | AT2G29340 | 56.566 | 198 | 86 | 0 | 12 | 209 | 4 | 201 | 2.69e-80 | 241 |
MS.gene62193.t1 | AT2G29340 | 56.566 | 198 | 86 | 0 | 12 | 209 | 4 | 201 | 2.69e-80 | 241 |
MS.gene62193.t1 | AT2G29310 | 56.566 | 198 | 86 | 0 | 12 | 209 | 4 | 201 | 3.97e-78 | 235 |
MS.gene62193.t1 | AT2G29320 | 59.162 | 191 | 77 | 1 | 13 | 202 | 11 | 201 | 1.81e-77 | 234 |
MS.gene62193.t1 | AT1G07440 | 58.721 | 172 | 68 | 1 | 1 | 172 | 1 | 169 | 2.93e-68 | 209 |
MS.gene62193.t1 | AT2G29310 | 54.749 | 179 | 81 | 0 | 31 | 209 | 21 | 199 | 8.17e-66 | 204 |
MS.gene62193.t1 | AT2G29170 | 58.824 | 102 | 41 | 1 | 1 | 101 | 1 | 102 | 1.01e-34 | 121 |
MS.gene62193.t1 | AT4G05530 | 32.114 | 246 | 162 | 5 | 15 | 259 | 9 | 250 | 1.56e-32 | 120 |
MS.gene62193.t1 | AT5G18210 | 32.171 | 258 | 166 | 5 | 10 | 259 | 3 | 259 | 7.18e-31 | 116 |
MS.gene62193.t1 | AT3G03980 | 31.599 | 269 | 165 | 7 | 6 | 259 | 5 | 269 | 2.43e-30 | 115 |
MS.gene62193.t1 | AT4G13180 | 32.171 | 258 | 167 | 6 | 10 | 261 | 8 | 263 | 2.87e-29 | 112 |
MS.gene62193.t1 | AT1G24360 | 30.364 | 247 | 159 | 7 | 21 | 261 | 80 | 319 | 1.57e-28 | 111 |
MS.gene62193.t1 | AT5G18210 | 31.481 | 270 | 162 | 7 | 10 | 271 | 3 | 257 | 4.63e-27 | 106 |
MS.gene62193.t1 | AT1G54870 | 33.463 | 257 | 158 | 8 | 15 | 262 | 84 | 336 | 3.56e-25 | 102 |
MS.gene62193.t1 | AT1G54870 | 33.074 | 257 | 159 | 7 | 15 | 262 | 82 | 334 | 4.16e-25 | 102 |
MS.gene62193.t1 | AT3G46170 | 29.457 | 258 | 171 | 7 | 15 | 263 | 26 | 281 | 6.86e-25 | 100 |
MS.gene62193.t1 | AT3G55310 | 30.769 | 260 | 165 | 11 | 15 | 263 | 17 | 272 | 2.92e-24 | 99.0 |
MS.gene62193.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 17 | 273 | 3.90e-24 | 98.6 |
MS.gene62193.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 15 | 271 | 4.30e-24 | 98.6 |
MS.gene62193.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 19 | 275 | 4.48e-24 | 98.6 |
MS.gene62193.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 14 | 270 | 5.17e-24 | 98.2 |
MS.gene62193.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 22 | 278 | 5.39e-24 | 98.6 |
MS.gene62193.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 15 | 271 | 5.95e-24 | 98.2 |
MS.gene62193.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 13 | 269 | 6.05e-24 | 98.2 |
MS.gene62193.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 19 | 275 | 6.94e-24 | 98.2 |
MS.gene62193.t1 | AT3G04000 | 31.317 | 281 | 153 | 9 | 4 | 258 | 3 | 269 | 1.16e-23 | 97.1 |
MS.gene62193.t1 | AT3G55290 | 30.000 | 260 | 167 | 11 | 15 | 263 | 17 | 272 | 1.34e-23 | 97.1 |
MS.gene62193.t1 | AT3G55290 | 30.000 | 260 | 167 | 11 | 15 | 263 | 18 | 273 | 1.40e-23 | 97.1 |
MS.gene62193.t1 | AT3G05260 | 33.208 | 265 | 165 | 7 | 6 | 262 | 28 | 288 | 1.46e-23 | 97.4 |
MS.gene62193.t1 | AT2G17845 | 28.897 | 263 | 171 | 9 | 15 | 264 | 47 | 306 | 3.31e-23 | 96.7 |
MS.gene62193.t1 | AT3G26760 | 29.699 | 266 | 169 | 7 | 8 | 260 | 30 | 290 | 1.15e-22 | 95.1 |
MS.gene62193.t1 | AT3G51680 | 33.166 | 199 | 123 | 5 | 15 | 205 | 32 | 228 | 1.43e-20 | 89.4 |
MS.gene62193.t1 | AT1G52340 | 29.658 | 263 | 163 | 8 | 15 | 260 | 18 | 275 | 1.89e-20 | 89.0 |
MS.gene62193.t1 | AT2G47120 | 28.464 | 267 | 169 | 12 | 11 | 267 | 2 | 256 | 2.79e-20 | 87.8 |
MS.gene62193.t1 | AT2G47120 | 28.517 | 263 | 166 | 12 | 15 | 267 | 7 | 257 | 4.10e-20 | 87.4 |
MS.gene62193.t1 | AT3G12800 | 26.070 | 257 | 174 | 7 | 15 | 259 | 10 | 262 | 2.68e-19 | 85.9 |
MS.gene62193.t1 | AT4G03140 | 26.562 | 256 | 174 | 6 | 15 | 260 | 78 | 329 | 5.86e-19 | 85.5 |
MS.gene62193.t1 | AT2G47130 | 28.295 | 258 | 172 | 8 | 11 | 261 | 2 | 253 | 2.33e-17 | 79.7 |
MS.gene62193.t1 | AT3G42960 | 29.183 | 257 | 158 | 9 | 20 | 260 | 13 | 261 | 1.67e-15 | 74.7 |
MS.gene62193.t1 | AT3G29260 | 29.924 | 264 | 160 | 12 | 11 | 261 | 2 | 253 | 2.81e-15 | 73.9 |
MS.gene62193.t1 | AT1G10310 | 34.132 | 167 | 107 | 3 | 19 | 184 | 19 | 183 | 1.16e-14 | 72.0 |
MS.gene62193.t1 | AT2G47140 | 27.344 | 256 | 170 | 8 | 15 | 261 | 6 | 254 | 1.92e-14 | 71.6 |
MS.gene62193.t1 | AT5G04900 | 31.492 | 181 | 116 | 6 | 21 | 195 | 83 | 261 | 3.08e-14 | 72.0 |
MS.gene62193.t1 | AT3G26770 | 26.316 | 266 | 174 | 7 | 15 | 264 | 41 | 300 | 1.07e-13 | 70.1 |
MS.gene62193.t1 | AT1G24470 | 27.053 | 207 | 134 | 6 | 17 | 213 | 52 | 251 | 1.86e-13 | 69.7 |
MS.gene62193.t1 | AT5G10050 | 26.761 | 213 | 142 | 5 | 21 | 232 | 11 | 210 | 4.41e-13 | 68.2 |
MS.gene62193.t1 | AT3G29250 | 27.203 | 261 | 172 | 9 | 11 | 261 | 2 | 254 | 6.39e-13 | 67.4 |
MS.gene62193.t1 | AT5G65205 | 30.556 | 180 | 114 | 6 | 21 | 197 | 12 | 183 | 6.54e-13 | 67.8 |
MS.gene62193.t1 | AT3G29250 | 27.308 | 260 | 171 | 9 | 12 | 261 | 41 | 292 | 7.28e-13 | 67.8 |
MS.gene62193.t1 | AT3G29250 | 27.237 | 257 | 169 | 9 | 15 | 261 | 42 | 290 | 1.38e-12 | 67.0 |
MS.gene62193.t1 | AT4G13250 | 25.391 | 256 | 152 | 8 | 21 | 243 | 165 | 414 | 1.70e-12 | 67.4 |
MS.gene62193.t1 | AT4G09750 | 30.144 | 209 | 122 | 6 | 15 | 205 | 41 | 243 | 9.58e-12 | 64.7 |
MS.gene62193.t1 | AT3G47350 | 26.636 | 214 | 142 | 7 | 17 | 221 | 46 | 253 | 1.43e-11 | 63.9 |
MS.gene62193.t1 | AT3G03330 | 26.904 | 197 | 139 | 3 | 6 | 197 | 32 | 228 | 1.50e-11 | 63.9 |
MS.gene62193.t1 | AT3G06060 | 26.108 | 203 | 141 | 3 | 9 | 207 | 31 | 228 | 1.79e-11 | 63.9 |
MS.gene62193.t1 | AT3G47350 | 26.636 | 214 | 142 | 7 | 17 | 221 | 46 | 253 | 2.05e-11 | 63.5 |
MS.gene62193.t1 | AT3G59710 | 27.049 | 244 | 126 | 6 | 8 | 204 | 9 | 247 | 2.16e-11 | 63.5 |
MS.gene62193.t1 | AT3G06060 | 26.108 | 203 | 141 | 3 | 9 | 207 | 48 | 245 | 2.20e-11 | 63.5 |
Find 54 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCACAGTTTACACTTGTTCT+AGG | 0.259656 | 3.2:-62763280 | MS.gene62193:CDS |
CATCCTCTGCTTAAAGAATC+TGG | 0.325649 | 3.2:-62762802 | MS.gene62193:CDS |
AATGGGCGAAAGACAATATA+AGG | 0.356013 | 3.2:-62762574 | MS.gene62193:CDS |
GGACAGATTGTTTCTGTTGA+TGG | 0.357615 | 3.2:-62760960 | MS.gene62193:CDS |
GGTTCTGCTATACGCTTTAT+CGG | 0.380929 | 3.2:+62761041 | None:intergenic |
GTTGAAGAACTCGCTGAGTT+TGG | 0.389672 | 3.2:-62763305 | MS.gene62193:CDS |
CTGCTTAAAGAATCTGGAAA+TGG | 0.406314 | 3.2:-62762796 | MS.gene62193:CDS |
CATCACTTTCGAATAATCTT+CGG | 0.431430 | 3.2:+62762867 | None:intergenic |
TCGGCTGTATACTCAATTGT+TGG | 0.433889 | 3.2:+62762886 | None:intergenic |
ACCGGCGGAACGCGTGGAAT+CGG | 0.443421 | 3.2:-62763338 | MS.gene62193:CDS |
GATGGAGGATTTACTGTGAA+TGG | 0.451398 | 3.2:-62760942 | MS.gene62193:CDS |
TCTCTCACAAGCATAGGTTC+TGG | 0.458121 | 3.2:-62762745 | MS.gene62193:CDS |
TGCATACCATCTATGTCAAT+TGG | 0.460251 | 3.2:-62762827 | MS.gene62193:CDS |
TGAAATTAGGTGAACAATGC+TGG | 0.465684 | 3.2:-62762925 | MS.gene62193:intron |
GAAAGTGATGACTACTAACT+TGG | 0.480086 | 3.2:-62762854 | MS.gene62193:CDS |
AGCGTTTATTCAGCTCCTCT+TGG | 0.481572 | 3.2:+62763255 | None:intergenic |
TCCGATTCCACGCGTTCCGC+CGG | 0.497124 | 3.2:+62763337 | None:intergenic |
AAGAGCGGTGGTTCCCTTGA+GGG | 0.505200 | 3.2:+62763364 | None:intergenic |
GTATTAGGTAATCCTCATGC+TGG | 0.506409 | 3.2:+62760911 | None:intergenic |
CTTGTCACCGGCGGAACGCG+TGG | 0.512318 | 3.2:-62763344 | MS.gene62193:CDS |
CCAGCTGCTTCCTACATCAC+TGG | 0.520639 | 3.2:-62760981 | MS.gene62193:CDS |
ACCACATGAAGTGTCTTCCT+TGG | 0.531653 | 3.2:-62761021 | MS.gene62193:CDS |
AACGTGGCTTCTTCTTTCAA+CGG | 0.542163 | 3.2:-62763146 | MS.gene62193:CDS |
TGATGTAGGAAGCAGCTGGC+AGG | 0.543439 | 3.2:+62760985 | None:intergenic |
TTAATCGAGTGGAAAGAGAA+AGG | 0.545150 | 3.2:-62763233 | MS.gene62193:CDS |
AGCGTCTATGCAGCAAGTAA+AGG | 0.551642 | 3.2:-62762721 | MS.gene62193:intron |
AACAATCTGTCCAGTGATGT+AGG | 0.551671 | 3.2:+62760971 | None:intergenic |
GATGTACCAATTGACATAGA+TGG | 0.556385 | 3.2:+62762821 | None:intergenic |
ATCTTCTTCTTCTCAAAGAG+AGG | 0.556668 | 3.2:-62763180 | MS.gene62193:CDS |
GGAACCACCGCTCTTGTCAC+CGG | 0.562041 | 3.2:-62763356 | MS.gene62193:CDS |
TTTCCAGATTCTTTAAGCAG+AGG | 0.567292 | 3.2:+62762799 | None:intergenic |
TATTAGGTAATCCTCATGCT+GGG | 0.570838 | 3.2:+62760912 | None:intergenic |
AAGCTCAAGATGGTCCCTCA+AGG | 0.573784 | 3.2:-62763378 | MS.gene62193:CDS |
CAGATTGTTTCTGTTGATGG+AGG | 0.575569 | 3.2:-62760957 | MS.gene62193:CDS |
AGGAAGCAGCTGGCAGGCAA+AGG | 0.580855 | 3.2:+62760991 | None:intergenic |
CAAGAGCGGTGGTTCCCTTG+AGG | 0.592264 | 3.2:+62763363 | None:intergenic |
CCAGTGATGTAGGAAGCAGC+TGG | 0.595402 | 3.2:+62760981 | None:intergenic |
AGCTCAAGATGGTCCCTCAA+GGG | 0.601552 | 3.2:-62763377 | MS.gene62193:CDS |
AGCATTACATGTTCCACAAG+TGG | 0.604747 | 3.2:+62762518 | None:intergenic |
GTTGCATCTCTCACAAGCAT+AGG | 0.610660 | 3.2:-62762751 | MS.gene62193:CDS |
GCAGTAGCAGAAGCTCAAGA+TGG | 0.612756 | 3.2:-62763388 | MS.gene62193:CDS |
ATGGATTTCAACCCAGCATG+AGG | 0.617391 | 3.2:-62760923 | MS.gene62193:CDS |
TGAATAAACGCTTAATCGAG+TGG | 0.619521 | 3.2:-62763244 | MS.gene62193:CDS |
CGTTCCGCCGGTGACAAGAG+CGG | 0.623119 | 3.2:+62763349 | None:intergenic |
GGAGCAACTGCGTTGCACCC+TGG | 0.632107 | 3.2:-62762553 | MS.gene62193:CDS |
TCCGCCGGTGACAAGAGCGG+TGG | 0.632560 | 3.2:+62763352 | None:intergenic |
GTATACGAAAACACCACTTG+TGG | 0.645433 | 3.2:-62762531 | MS.gene62193:CDS |
ACCACCGCTCTTGTCACCGG+CGG | 0.656160 | 3.2:-62763353 | MS.gene62193:CDS |
AGAGGAGCTTATTCGAAACG+TGG | 0.683344 | 3.2:-62763162 | MS.gene62193:CDS |
CACTTGTTCTAGGAACCAAG+AGG | 0.692789 | 3.2:-62763270 | MS.gene62193:CDS |
ACCAAGGAAGACACTTCATG+TGG | 0.707139 | 3.2:+62761020 | None:intergenic |
CAGGCAAAGGAAAGTCACCA+AGG | 0.712267 | 3.2:+62761004 | None:intergenic |
CCTAGAACAAGTGTAAACTG+TGG | 0.737540 | 3.2:+62763280 | None:intergenic |
ACAATGCTGGAACAAATGTG+AGG | 0.761871 | 3.2:-62762912 | MS.gene62193:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTAGTATTAATCTATAAA+TGG | - | chr3.2:62763161-62763180 | MS.gene62193:CDS | 15.0% |
!! | CAAAAGAAAATATATAGAAA+AGG | + | chr3.2:62761224-62761243 | None:intergenic | 15.0% |
!!! | TATTCTTCTATTTTGTTATT+AGG | - | chr3.2:62761952-62761971 | MS.gene62193:intron | 15.0% |
!! | AATTCTTTAGATTATTGAAC+AGG | - | chr3.2:62762095-62762114 | MS.gene62193:intron | 20.0% |
!! | ATCCATTATATTTAAGCAAA+AGG | + | chr3.2:62761653-62761672 | None:intergenic | 20.0% |
!! | TAGAACCAAAAAGAATAAAT+TGG | - | chr3.2:62762363-62762382 | MS.gene62193:intron | 20.0% |
!! | TTTGTAATCATGATTTGATT+TGG | - | chr3.2:62761885-62761904 | MS.gene62193:intron | 20.0% |
!!! | AACCTTTTGCTTAAATATAA+TGG | - | chr3.2:62761648-62761667 | MS.gene62193:intron | 20.0% |
!!! | AGTAACCAATTTATTCTTTT+TGG | + | chr3.2:62762371-62762390 | None:intergenic | 20.0% |
!!! | TTTTGCTTAAATATAATGGA+TGG | - | chr3.2:62761652-62761671 | MS.gene62193:intron | 20.0% |
! | AAAAAATCTTGCTTGTGAAT+GGG | - | chr3.2:62761727-62761746 | MS.gene62193:intron | 25.0% |
! | ATCAAAATTGCTTGCATATT+TGG | - | chr3.2:62762121-62762140 | MS.gene62193:intron | 25.0% |
! | ATGTATATGATACACAATTG+TGG | - | chr3.2:62762699-62762718 | MS.gene62193:intron | 25.0% |
! | ATTCATTTAGTATTGCATAC+AGG | - | chr3.2:62762597-62762616 | MS.gene62193:CDS | 25.0% |
! | ATTGAAGATATATCCAATGT+CGG | + | chr3.2:62761317-62761336 | None:intergenic | 25.0% |
! | CAATGTAATTACTTCCATAA+AGG | - | chr3.2:62762261-62762280 | MS.gene62193:intron | 25.0% |
! | CATACGAATAAGAAATGAAT+TGG | - | chr3.2:62762905-62762924 | MS.gene62193:CDS | 25.0% |
! | TAAAAAAAATGACAAAGCCA+TGG | + | chr3.2:62761850-62761869 | None:intergenic | 25.0% |
! | TACTCTTATCACAAGTTTAA+TGG | - | chr3.2:62762190-62762209 | MS.gene62193:intron | 25.0% |
! | TATGATGTTCTTGTGAAATT+AGG | - | chr3.2:62761380-62761399 | MS.gene62193:intron | 25.0% |
! | TCAAAATTGCTTGCATATTT+GGG | - | chr3.2:62762122-62762141 | MS.gene62193:intron | 25.0% |
! | TGATTATCAAATGACCTTTA+TGG | + | chr3.2:62762278-62762297 | None:intergenic | 25.0% |
! | TTCATTTAGTATTGCATACA+GGG | - | chr3.2:62762598-62762617 | MS.gene62193:CDS | 25.0% |
!! | GACATACTAAAACATGATTT+TGG | + | chr3.2:62762759-62762778 | None:intergenic | 25.0% |
!!! | ACATTCATACTCATTTTTGT+AGG | - | chr3.2:62762014-62762033 | MS.gene62193:intron | 25.0% |
AATTCACAATATTTGCACCT+AGG | - | chr3.2:62762322-62762341 | MS.gene62193:intron | 30.0% | |
ACCTTCAATTATTCATTCCA+TGG | - | chr3.2:62761830-62761849 | MS.gene62193:intron | 30.0% | |
AGTCCTCAACTATAAAAGAT+TGG | + | chr3.2:62762781-62762800 | None:intergenic | 30.0% | |
ATAGTTGAGGACTGTATATT+TGG | - | chr3.2:62762788-62762807 | MS.gene62193:CDS | 30.0% | |
ATTAATACTACATGAGCACA+CGG | + | chr3.2:62763154-62763173 | None:intergenic | 30.0% | |
ATTCACAATATTTGCACCTA+GGG | - | chr3.2:62762323-62762342 | MS.gene62193:intron | 30.0% | |
ATTGGTCATTGTTTAATCAG+GGG | - | chr3.2:62761922-62761941 | MS.gene62193:intron | 30.0% | |
ATTGTTTAATCAGGGGAATA+TGG | - | chr3.2:62761929-62761948 | MS.gene62193:intron | 30.0% | |
CAAAAAATCTTGCTTGTGAA+TGG | - | chr3.2:62761726-62761745 | MS.gene62193:intron | 30.0% | |
CATCACTTTCGAATAATCTT+CGG | + | chr3.2:62761454-62761473 | None:intergenic | 30.0% | |
TTAAACAATGACCAATCAGT+CGG | + | chr3.2:62761918-62761937 | None:intergenic | 30.0% | |
! | ATATCTTCAATCAGAAGTGT+CGG | - | chr3.2:62761326-62761345 | MS.gene62193:intron | 30.0% |
! | GATTGGTCATTGTTTAATCA+GGG | - | chr3.2:62761921-62761940 | MS.gene62193:intron | 30.0% |
! | TGATTGGTCATTGTTTAATC+AGG | - | chr3.2:62761920-62761939 | MS.gene62193:intron | 30.0% |
! | TGTCCAATCTTTTATAGTTG+AGG | - | chr3.2:62762775-62762794 | MS.gene62193:CDS | 30.0% |
! | TTAATGGTTTTCCATGTTGA+CGG | - | chr3.2:62762206-62762225 | MS.gene62193:intron | 30.0% |
!! | AAGAAATGAATTGGCTTTGA+GGG | - | chr3.2:62762914-62762933 | MS.gene62193:CDS | 30.0% |
!! | TAAGAAATGAATTGGCTTTG+AGG | - | chr3.2:62762913-62762932 | MS.gene62193:CDS | 30.0% |
!!! | ACTTTTTTGTTAAGACGCAT+GGG | - | chr3.2:62762957-62762976 | MS.gene62193:intron | 30.0% |
!!! | TTTTGGTTCTAACTGACAAA+TGG | + | chr3.2:62762354-62762373 | None:intergenic | 30.0% |
AATGGGCGAAAGACAATATA+AGG | - | chr3.2:62761744-62761763 | MS.gene62193:intron | 35.0% | |
AATTGCTTGCATATTTGGGA+TGG | - | chr3.2:62762126-62762145 | MS.gene62193:intron | 35.0% | |
ACATACGTGAATCAAACAGA+AGG | + | chr3.2:62762683-62762702 | None:intergenic | 35.0% | |
ATCCCTTCACAAATTGTCTA+TGG | - | chr3.2:62762497-62762516 | MS.gene62193:intron | 35.0% | |
ATCTTCTTCTTCTCAAAGAG+AGG | - | chr3.2:62761138-62761157 | MS.gene62193:intron | 35.0% | |
CTGCTTAAAGAATCTGGAAA+TGG | - | chr3.2:62761522-62761541 | MS.gene62193:intron | 35.0% | |
GAAAGTGATGACTACTAACT+TGG | - | chr3.2:62761464-62761483 | MS.gene62193:intron | 35.0% | |
GAGGACTGTATATTTGGATA+TGG | - | chr3.2:62762794-62762813 | MS.gene62193:CDS | 35.0% | |
GATGTACCAATTGACATAGA+TGG | + | chr3.2:62761500-62761519 | None:intergenic | 35.0% | |
GCCATGGAATGAATAATTGA+AGG | + | chr3.2:62761834-62761853 | None:intergenic | 35.0% | |
TAATCGTCAGTGTTGTCAAA+TGG | + | chr3.2:62762563-62762582 | None:intergenic | 35.0% | |
TGAAATTAGGTGAACAATGC+TGG | - | chr3.2:62761393-62761412 | MS.gene62193:intron | 35.0% | |
TGAATAAACGCTTAATCGAG+TGG | - | chr3.2:62761074-62761093 | MS.gene62193:CDS | 35.0% | |
TGCATACCATCTATGTCAAT+TGG | - | chr3.2:62761491-62761510 | MS.gene62193:intron | 35.0% | |
TTAATCGAGTGGAAAGAGAA+AGG | - | chr3.2:62761085-62761104 | MS.gene62193:CDS | 35.0% | |
TTGGTTTATCTGTGTATGGA+GGG | - | chr3.2:62763063-62763082 | MS.gene62193:intron | 35.0% | |
TTTCCAGATTCTTTAAGCAG+AGG | + | chr3.2:62761522-62761541 | None:intergenic | 35.0% | |
! | GAGAAAGGTTTTTCTGTTCA+TGG | - | chr3.2:62761100-62761119 | MS.gene62193:intron | 35.0% |
! | GATACATTTTTCCGTCAACA+TGG | + | chr3.2:62762220-62762239 | None:intergenic | 35.0% |
! | TGGCTCTTTAACATTTTTCC+TGG | - | chr3.2:62762982-62763001 | MS.gene62193:intron | 35.0% |
!! | ATGATTTTGGCATCTTCACA+TGG | + | chr3.2:62762746-62762765 | None:intergenic | 35.0% |
!!! | GACTTTTTTGTTAAGACGCA+TGG | - | chr3.2:62762956-62762975 | MS.gene62193:intron | 35.0% |
AACAATCTGTCCAGTGATGT+AGG | + | chr3.2:62763350-62763369 | None:intergenic | 40.0% | |
AACAGAAGGCAGTGGAATTA+TGG | + | chr3.2:62762669-62762688 | None:intergenic | 40.0% | |
AACGTGGCTTCTTCTTTCAA+CGG | - | chr3.2:62761172-62761191 | MS.gene62193:intron | 40.0% | |
ACAATGCTGGAACAAATGTG+AGG | - | chr3.2:62761406-62761425 | MS.gene62193:intron | 40.0% | |
ACAGTTGTAGCAAGTGATTC+TGG | - | chr3.2:62762849-62762868 | MS.gene62193:CDS | 40.0% | |
AGCATTACATGTTCCACAAG+TGG | + | chr3.2:62761803-62761822 | None:intergenic | 40.0% | |
CACATGGATCAAGGTAACAT+TGG | + | chr3.2:62762730-62762749 | None:intergenic | 40.0% | |
CAGTTGTAGCAAGTGATTCT+GGG | - | chr3.2:62762850-62762869 | MS.gene62193:CDS | 40.0% | |
CATCCTCTGCTTAAAGAATC+TGG | - | chr3.2:62761516-62761535 | MS.gene62193:intron | 40.0% | |
CCACAGTTTACACTTGTTCT+AGG | - | chr3.2:62761038-62761057 | MS.gene62193:CDS | 40.0% | |
CCTAGAACAAGTGTAAACTG+TGG | + | chr3.2:62761041-62761060 | None:intergenic | 40.0% | |
CCTTCACAAATTGTCTATGG+CGG | - | chr3.2:62762500-62762519 | MS.gene62193:intron | 40.0% | |
CGCCATAGACAATTTGTGAA+GGG | + | chr3.2:62762502-62762521 | None:intergenic | 40.0% | |
GATGGAGGATTTACTGTGAA+TGG | - | chr3.2:62763376-62763395 | MS.gene62193:CDS | 40.0% | |
GGGCATCAATATGGCAAATA+TGG | - | chr3.2:62762934-62762953 | MS.gene62193:intron | 40.0% | |
GGTTCTGCTATACGCTTTAT+CGG | + | chr3.2:62763280-62763299 | None:intergenic | 40.0% | |
GTACTTGTCTGTAGTCTTTG+AGG | - | chr3.2:62762066-62762085 | MS.gene62193:intron | 40.0% | |
GTATACGAAAACACCACTTG+TGG | - | chr3.2:62761787-62761806 | MS.gene62193:intron | 40.0% | |
TCGGCTGTATACTCAATTGT+TGG | + | chr3.2:62761435-62761454 | None:intergenic | 40.0% | |
TTTGTTAAGACGCATGGGTT+TGG | - | chr3.2:62762962-62762981 | MS.gene62193:intron | 40.0% | |
! | AAGTGGTGTTTTCGTATACC+AGG | + | chr3.2:62761786-62761805 | None:intergenic | 40.0% |
! | AGTGGTGTTTTCGTATACCA+GGG | + | chr3.2:62761785-62761804 | None:intergenic | 40.0% |
! | GTTGGTTTATCTGTGTATGG+AGG | - | chr3.2:62763062-62763081 | MS.gene62193:intron | 40.0% |
! | TGGAGGGTTTTCTGCTATAT+AGG | - | chr3.2:62763079-62763098 | MS.gene62193:intron | 40.0% |
!! | CAGATTGTTTCTGTTGATGG+AGG | - | chr3.2:62763361-62763380 | MS.gene62193:CDS | 40.0% |
!! | GGACAGATTGTTTCTGTTGA+TGG | - | chr3.2:62763358-62763377 | MS.gene62193:CDS | 40.0% |
!! | GTGGTTGGTTTATCTGTGTA+TGG | - | chr3.2:62763059-62763078 | MS.gene62193:intron | 40.0% |
ACCAAGGAAGACACTTCATG+TGG | + | chr3.2:62763301-62763320 | None:intergenic | 45.0% | |
AGAGGAGCTTATTCGAAACG+TGG | - | chr3.2:62761156-62761175 | MS.gene62193:intron | 45.0% | |
AGCGTCTATGCAGCAAGTAA+AGG | - | chr3.2:62761597-62761616 | MS.gene62193:intron | 45.0% | |
AGCGTTTATTCAGCTCCTCT+TGG | + | chr3.2:62761066-62761085 | None:intergenic | 45.0% | |
ATGGATTTCAACCCAGCATG+AGG | - | chr3.2:62763395-62763414 | MS.gene62193:CDS | 45.0% | |
CCGCCATAGACAATTTGTGA+AGG | + | chr3.2:62762503-62762522 | None:intergenic | 45.0% | |
CGATGGTGCAATATGACAGA+AGG | - | chr3.2:62762420-62762439 | MS.gene62193:intron | 45.0% | |
GTGAATCAAACAGAAGGCAG+TGG | + | chr3.2:62762677-62762696 | None:intergenic | 45.0% | |
GTGATTACCAGTGTTGTCGA+TGG | - | chr3.2:62762403-62762422 | MS.gene62193:intron | 45.0% | |
GTTGAAGAACTCGCTGAGTT+TGG | - | chr3.2:62761013-62761032 | MS.gene62193:CDS | 45.0% | |
GTTGCATCTCTCACAAGCAT+AGG | - | chr3.2:62761567-62761586 | MS.gene62193:intron | 45.0% | |
TATTGCACCATCGACAACAC+TGG | + | chr3.2:62762413-62762432 | None:intergenic | 45.0% | |
TCTCTCACAAGCATAGGTTC+TGG | - | chr3.2:62761573-62761592 | MS.gene62193:intron | 45.0% | |
TGGCATCTTCACATGGATCA+AGG | + | chr3.2:62762739-62762758 | None:intergenic | 45.0% | |
TTGTAGCAAGTGATTCTGGG+TGG | - | chr3.2:62762853-62762872 | MS.gene62193:CDS | 45.0% | |
! | ACCACATGAAGTGTCTTCCT+TGG | - | chr3.2:62763297-62763316 | MS.gene62193:CDS | 45.0% |
! | GCTGCAATGGCGTATTTCTA+TGG | + | chr3.2:62762456-62762475 | None:intergenic | 45.0% |
! | TTGGATGAACACCGACTGAT+TGG | - | chr3.2:62761904-62761923 | MS.gene62193:intron | 45.0% |
!! | CACTTGTTCTAGGAACCAAG+AGG | - | chr3.2:62761048-62761067 | MS.gene62193:CDS | 45.0% |
!! | TGGCTTTGAGGGCATCAATA+TGG | - | chr3.2:62762925-62762944 | MS.gene62193:intron | 45.0% |
AAGCTCAAGATGGTCCCTCA+AGG | - | chr3.2:62760940-62760959 | MS.gene62193:CDS | 50.0% | |
ACCACCTACACAAACACAGC+AGG | + | chr3.2:62763044-62763063 | None:intergenic | 50.0% | |
ACTAGAGCATGTGCAGATCC+AGG | + | chr3.2:62763003-62763022 | None:intergenic | 50.0% | |
AGCTCAAGATGGTCCCTCAA+GGG | - | chr3.2:62760941-62760960 | MS.gene62193:CDS | 50.0% | |
CAGGCAAAGGAAAGTCACCA+AGG | + | chr3.2:62763317-62763336 | None:intergenic | 50.0% | |
CATGTGTCTGTGTCCGACAT+TGG | - | chr3.2:62761301-62761320 | MS.gene62193:intron | 50.0% | |
GCAGTAGCAGAAGCTCAAGA+TGG | - | chr3.2:62760930-62760949 | MS.gene62193:CDS | 50.0% | |
GCTGTGTTTGTGTAGGTGGT+TGG | - | chr3.2:62763044-62763063 | MS.gene62193:intron | 50.0% | |
GTGTTGTCAAATGGCTGCCA+TGG | + | chr3.2:62762554-62762573 | None:intergenic | 50.0% | |
TGTGCCTGCTGTGTTTGTGT+AGG | - | chr3.2:62763037-62763056 | MS.gene62193:intron | 50.0% | |
AAGAGCGGTGGTTCCCTTGA+GGG | + | chr3.2:62760957-62760976 | None:intergenic | 55.0% | |
ACCGACACGTCATTCTGCCA+TGG | - | chr3.2:62762534-62762553 | MS.gene62193:CDS | 55.0% | |
CCAGCTGCTTCCTACATCAC+TGG | - | chr3.2:62763337-62763356 | MS.gene62193:CDS | 55.0% | |
CCAGTGATGTAGGAAGCAGC+TGG | + | chr3.2:62763340-62763359 | None:intergenic | 55.0% | |
CTGACAAATGGCGCTTCCCT+AGG | + | chr3.2:62762342-62762361 | None:intergenic | 55.0% | |
GCCATGGCAGAATGACGTGT+CGG | + | chr3.2:62762538-62762557 | None:intergenic | 55.0% | |
GCCTGCTGTGTTTGTGTAGG+TGG | - | chr3.2:62763040-62763059 | MS.gene62193:intron | 55.0% | |
TGATGTAGGAAGCAGCTGGC+AGG | + | chr3.2:62763336-62763355 | None:intergenic | 55.0% | |
TGGCATGGCATAGGCTGCAA+TGG | + | chr3.2:62762469-62762488 | None:intergenic | 55.0% | |
TTGCAGCCTATGCCATGCCA+TGG | - | chr3.2:62762469-62762488 | MS.gene62193:intron | 55.0% | |
TTGTGAAGGGATGCCTGCCA+TGG | + | chr3.2:62762489-62762508 | None:intergenic | 55.0% | |
AAGGGATGCCTGCCATGGCA+TGG | + | chr3.2:62762484-62762503 | None:intergenic | 60.0% | |
AGCCTATGCCATGCCATGGC+AGG | - | chr3.2:62762473-62762492 | MS.gene62193:intron | 60.0% | |
AGGAAGCAGCTGGCAGGCAA+AGG | + | chr3.2:62763330-62763349 | None:intergenic | 60.0% | |
CAAGAGCGGTGGTTCCCTTG+AGG | + | chr3.2:62760958-62760977 | None:intergenic | 60.0% | |
GGAACCACCGCTCTTGTCAC+CGG | - | chr3.2:62760962-62760981 | MS.gene62193:CDS | 60.0% | |
TGCCTGCCATGGCATGGCAT+AGG | + | chr3.2:62762478-62762497 | None:intergenic | 60.0% | |
ACCACCGCTCTTGTCACCGG+CGG | - | chr3.2:62760965-62760984 | MS.gene62193:CDS | 65.0% | |
ACCGGCGGAACGCGTGGAAT+CGG | - | chr3.2:62760980-62760999 | MS.gene62193:CDS | 65.0% | |
CGTTCCGCCGGTGACAAGAG+CGG | + | chr3.2:62760972-62760991 | None:intergenic | 65.0% | |
GGAGCAACTGCGTTGCACCC+TGG | - | chr3.2:62761765-62761784 | MS.gene62193:intron | 65.0% | |
TCCGATTCCACGCGTTCCGC+CGG | + | chr3.2:62760984-62761003 | None:intergenic | 65.0% | |
CTTGTCACCGGCGGAACGCG+TGG | - | chr3.2:62760974-62760993 | MS.gene62193:CDS | 70.0% | |
TCCGCCGGTGACAAGAGCGG+TGG | + | chr3.2:62760969-62760988 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 62760914 | 62763426 | 62760914 | ID=MS.gene62193 |
chr3.2 | mRNA | 62760914 | 62763426 | 62760914 | ID=MS.gene62193.t1;Parent=MS.gene62193 |
chr3.2 | exon | 62763130 | 62763426 | 62763130 | ID=MS.gene62193.t1.exon1;Parent=MS.gene62193.t1 |
chr3.2 | CDS | 62763130 | 62763426 | 62763130 | ID=cds.MS.gene62193.t1;Parent=MS.gene62193.t1 |
chr3.2 | exon | 62762722 | 62762938 | 62762722 | ID=MS.gene62193.t1.exon2;Parent=MS.gene62193.t1 |
chr3.2 | CDS | 62762722 | 62762938 | 62762722 | ID=cds.MS.gene62193.t1;Parent=MS.gene62193.t1 |
chr3.2 | exon | 62762526 | 62762632 | 62762526 | ID=MS.gene62193.t1.exon3;Parent=MS.gene62193.t1 |
chr3.2 | CDS | 62762526 | 62762632 | 62762526 | ID=cds.MS.gene62193.t1;Parent=MS.gene62193.t1 |
chr3.2 | exon | 62760914 | 62761108 | 62760914 | ID=MS.gene62193.t1.exon4;Parent=MS.gene62193.t1 |
chr3.2 | CDS | 62760914 | 62761108 | 62760914 | ID=cds.MS.gene62193.t1;Parent=MS.gene62193.t1 |
Gene Sequence |
Protein sequence |