Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63306.t1 | XP_013460705.1 | 96.3 | 271 | 10 | 0 | 1 | 271 | 1 | 271 | 9.50E-143 | 516.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63306.t1 | Q9LHT0 | 69.8 | 258 | 78 | 0 | 12 | 269 | 6 | 263 | 4.8e-103 | 375.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63306.t1 | A0A072UY55 | 96.3 | 271 | 10 | 0 | 1 | 271 | 1 | 271 | 6.9e-143 | 516.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055133 | MS.gene63306 | 0.807104 | 5.95E-50 | -1.69E-46 |
MS.gene058845 | MS.gene63306 | 0.800409 | 1.46E-48 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63306.t1 | MTR_3g068085 | 96.310 | 271 | 10 | 0 | 1 | 271 | 1 | 271 | 0.0 | 520 |
MS.gene63306.t1 | MTR_3g068070 | 89.394 | 264 | 28 | 0 | 1 | 264 | 1 | 264 | 2.12e-178 | 492 |
MS.gene63306.t1 | MTR_3g068065 | 85.547 | 256 | 37 | 0 | 15 | 270 | 17 | 272 | 1.76e-165 | 459 |
MS.gene63306.t1 | MTR_3g068155 | 77.068 | 266 | 61 | 0 | 6 | 271 | 10 | 275 | 2.64e-156 | 436 |
MS.gene63306.t1 | MTR_3g068175 | 73.993 | 273 | 69 | 1 | 1 | 271 | 1 | 273 | 1.57e-149 | 419 |
MS.gene63306.t1 | MTR_3g068175 | 72.924 | 277 | 69 | 2 | 1 | 271 | 1 | 277 | 2.04e-147 | 414 |
MS.gene63306.t1 | MTR_4g064883 | 62.109 | 256 | 97 | 0 | 12 | 267 | 11 | 266 | 2.66e-125 | 357 |
MS.gene63306.t1 | MTR_4g064887 | 61.069 | 262 | 102 | 0 | 1 | 262 | 1 | 262 | 1.83e-122 | 350 |
MS.gene63306.t1 | MTR_7g063320 | 60.700 | 257 | 97 | 1 | 9 | 261 | 9 | 265 | 1.04e-113 | 328 |
MS.gene63306.t1 | MTR_7g063270 | 61.240 | 258 | 97 | 1 | 6 | 260 | 7 | 264 | 5.21e-111 | 321 |
MS.gene63306.t1 | MTR_7g063390 | 60.000 | 260 | 100 | 2 | 6 | 261 | 7 | 266 | 1.63e-110 | 320 |
MS.gene63306.t1 | MTR_7g063360 | 60.769 | 260 | 98 | 2 | 6 | 261 | 7 | 266 | 1.46e-109 | 317 |
MS.gene63306.t1 | MTR_7g063330 | 58.175 | 263 | 107 | 1 | 1 | 260 | 1 | 263 | 5.08e-109 | 316 |
MS.gene63306.t1 | MTR_7g063260 | 59.073 | 259 | 102 | 1 | 6 | 260 | 7 | 265 | 1.97e-106 | 309 |
MS.gene63306.t1 | MTR_4g064887 | 61.722 | 209 | 80 | 0 | 1 | 209 | 1 | 209 | 1.04e-95 | 281 |
MS.gene63306.t1 | MTR_4g064883 | 63.131 | 198 | 73 | 0 | 12 | 209 | 11 | 208 | 9.45e-94 | 275 |
MS.gene63306.t1 | MTR_7g063270 | 51.163 | 258 | 74 | 3 | 6 | 260 | 7 | 215 | 1.20e-81 | 244 |
MS.gene63306.t1 | MTR_4g132850 | 32.114 | 246 | 162 | 4 | 15 | 259 | 7 | 248 | 4.29e-33 | 121 |
MS.gene63306.t1 | MTR_3g085740 | 30.488 | 246 | 160 | 6 | 21 | 261 | 81 | 320 | 2.23e-30 | 116 |
MS.gene63306.t1 | MTR_7g094510 | 32.157 | 255 | 157 | 9 | 15 | 259 | 6 | 254 | 4.85e-29 | 111 |
MS.gene63306.t1 | MTR_7g094520 | 32.812 | 256 | 154 | 9 | 15 | 259 | 11 | 259 | 1.75e-28 | 109 |
MS.gene63306.t1 | MTR_4g058810 | 30.651 | 261 | 168 | 9 | 14 | 264 | 10 | 267 | 5.08e-28 | 108 |
MS.gene63306.t1 | MTR_7g071680 | 31.560 | 282 | 155 | 8 | 8 | 260 | 22 | 294 | 1.14e-27 | 108 |
MS.gene63306.t1 | MTR_4g058840 | 29.730 | 259 | 171 | 7 | 15 | 264 | 11 | 267 | 6.80e-27 | 105 |
MS.gene63306.t1 | MTR_4g058820 | 29.730 | 259 | 171 | 7 | 15 | 264 | 11 | 267 | 6.80e-27 | 105 |
MS.gene63306.t1 | MTR_1196s0010 | 32.510 | 243 | 153 | 6 | 20 | 259 | 279 | 513 | 6.27e-25 | 103 |
MS.gene63306.t1 | MTR_7g083870 | 30.216 | 278 | 172 | 8 | 1 | 260 | 14 | 287 | 1.57e-23 | 97.4 |
MS.gene63306.t1 | MTR_4g052350 | 30.502 | 259 | 163 | 10 | 15 | 264 | 14 | 264 | 6.04e-23 | 95.1 |
MS.gene63306.t1 | MTR_4g131740 | 31.154 | 260 | 161 | 8 | 15 | 262 | 40 | 293 | 1.82e-22 | 94.4 |
MS.gene63306.t1 | MTR_4g052320 | 29.961 | 257 | 168 | 9 | 15 | 264 | 8 | 259 | 2.67e-21 | 90.5 |
MS.gene63306.t1 | MTR_3g020670 | 31.136 | 273 | 165 | 11 | 3 | 260 | 6 | 270 | 5.87e-21 | 90.1 |
MS.gene63306.t1 | MTR_7g107670 | 27.778 | 270 | 168 | 8 | 7 | 260 | 26 | 284 | 7.47e-21 | 90.1 |
MS.gene63306.t1 | MTR_7g113650 | 30.739 | 257 | 165 | 8 | 15 | 262 | 40 | 292 | 5.57e-20 | 87.4 |
MS.gene63306.t1 | MTR_8g442750 | 28.125 | 256 | 169 | 6 | 15 | 259 | 14 | 265 | 6.15e-20 | 87.4 |
MS.gene63306.t1 | MTR_6g023990 | 29.323 | 266 | 173 | 8 | 4 | 259 | 2 | 262 | 8.95e-20 | 86.7 |
MS.gene63306.t1 | MTR_6g023590 | 27.925 | 265 | 177 | 7 | 4 | 259 | 2 | 261 | 1.79e-19 | 85.5 |
MS.gene63306.t1 | MTR_4g052300 | 29.183 | 257 | 169 | 10 | 15 | 264 | 8 | 258 | 1.98e-19 | 85.5 |
MS.gene63306.t1 | MTR_3g068075 | 82.000 | 50 | 8 | 1 | 123 | 171 | 1 | 50 | 3.79e-19 | 80.1 |
MS.gene63306.t1 | MTR_4g052340 | 27.652 | 264 | 164 | 7 | 15 | 264 | 14 | 264 | 3.80e-19 | 84.7 |
MS.gene63306.t1 | MTR_1g051165 | 25.954 | 262 | 180 | 8 | 15 | 263 | 14 | 274 | 6.19e-19 | 84.3 |
MS.gene63306.t1 | MTR_4g058830 | 34.146 | 164 | 101 | 6 | 106 | 264 | 52 | 213 | 8.27e-19 | 82.8 |
MS.gene63306.t1 | MTR_1g068955 | 30.651 | 261 | 162 | 9 | 15 | 263 | 14 | 267 | 1.54e-18 | 83.6 |
MS.gene63306.t1 | MTR_1g082760 | 27.907 | 258 | 173 | 7 | 15 | 263 | 40 | 293 | 1.55e-18 | 83.6 |
MS.gene63306.t1 | MTR_4g078630 | 29.304 | 273 | 169 | 10 | 3 | 260 | 8 | 271 | 2.34e-18 | 82.8 |
MS.gene63306.t1 | MTR_7g105460 | 27.338 | 278 | 180 | 10 | 4 | 270 | 2 | 268 | 1.30e-17 | 80.9 |
MS.gene63306.t1 | MTR_7g105590 | 30.645 | 186 | 122 | 5 | 15 | 197 | 8 | 189 | 2.12e-17 | 78.6 |
MS.gene63306.t1 | MTR_6g023910 | 28.464 | 267 | 173 | 9 | 4 | 259 | 2 | 261 | 2.82e-17 | 79.7 |
MS.gene63306.t1 | MTR_6g023600 | 28.302 | 265 | 176 | 7 | 4 | 259 | 2 | 261 | 2.88e-17 | 79.7 |
MS.gene63306.t1 | MTR_5g098650 | 68.627 | 51 | 16 | 0 | 221 | 271 | 124 | 174 | 2.10e-16 | 75.5 |
MS.gene63306.t1 | MTR_6g023950 | 27.376 | 263 | 181 | 7 | 4 | 259 | 2 | 261 | 2.14e-16 | 77.0 |
MS.gene63306.t1 | MTR_6g023610 | 27.473 | 273 | 180 | 9 | 4 | 265 | 2 | 267 | 5.01e-16 | 76.3 |
MS.gene63306.t1 | MTR_7g105580 | 27.059 | 255 | 152 | 8 | 15 | 260 | 8 | 237 | 6.84e-16 | 75.5 |
MS.gene63306.t1 | MTR_7g110140 | 27.863 | 262 | 181 | 7 | 11 | 267 | 2 | 260 | 1.54e-15 | 74.7 |
MS.gene63306.t1 | MTR_8g089575 | 30.392 | 204 | 133 | 5 | 17 | 213 | 47 | 248 | 2.11e-15 | 75.1 |
MS.gene63306.t1 | MTR_2g090165 | 26.692 | 266 | 184 | 7 | 11 | 269 | 2 | 263 | 2.19e-15 | 74.3 |
MS.gene63306.t1 | MTR_6g023600 | 27.925 | 265 | 171 | 7 | 4 | 259 | 2 | 255 | 8.62e-15 | 72.8 |
MS.gene63306.t1 | MTR_7g110130 | 26.255 | 259 | 178 | 7 | 11 | 261 | 2 | 255 | 1.61e-14 | 72.0 |
MS.gene63306.t1 | MTR_4g134660 | 30.769 | 169 | 114 | 2 | 19 | 184 | 10 | 178 | 1.87e-14 | 71.2 |
MS.gene63306.t1 | MTR_1579s0020 | 35.227 | 88 | 56 | 1 | 181 | 268 | 1 | 87 | 4.96e-14 | 66.6 |
MS.gene63306.t1 | MTR_7g110160 | 27.626 | 257 | 158 | 7 | 11 | 261 | 2 | 236 | 1.30e-13 | 68.9 |
MS.gene63306.t1 | MTR_8g044240 | 27.803 | 223 | 143 | 8 | 21 | 233 | 75 | 289 | 2.12e-13 | 69.7 |
MS.gene63306.t1 | MTR_6g035395 | 27.059 | 255 | 165 | 7 | 12 | 261 | 2 | 240 | 8.19e-13 | 67.0 |
MS.gene63306.t1 | MTR_3g098470 | 34.459 | 148 | 94 | 3 | 8 | 154 | 25 | 170 | 1.42e-12 | 67.0 |
MS.gene63306.t1 | MTR_3g086210 | 27.461 | 193 | 135 | 3 | 17 | 204 | 53 | 245 | 2.31e-12 | 66.2 |
MS.gene63306.t1 | MTR_6g041980 | 34.247 | 146 | 84 | 5 | 15 | 154 | 64 | 203 | 3.10e-12 | 65.5 |
MS.gene63306.t1 | MTR_6g041980 | 30.144 | 209 | 122 | 6 | 15 | 205 | 64 | 266 | 5.14e-12 | 65.5 |
MS.gene63306.t1 | MTR_7g105570 | 28.191 | 188 | 116 | 7 | 94 | 270 | 46 | 225 | 1.49e-11 | 63.2 |
MS.gene63306.t1 | MTR_3g113870 | 26.667 | 180 | 126 | 4 | 28 | 205 | 34 | 209 | 1.56e-11 | 63.2 |
MS.gene63306.t1 | MTR_1g031180 | 33.784 | 148 | 95 | 3 | 8 | 154 | 30 | 175 | 1.70e-11 | 63.9 |
MS.gene63306.t1 | MTR_1275s0010 | 31.250 | 112 | 77 | 0 | 139 | 250 | 259 | 370 | 1.86e-11 | 64.3 |
MS.gene63306.t1 | MTR_7g080410 | 26.111 | 180 | 129 | 3 | 22 | 197 | 45 | 224 | 2.60e-11 | 63.2 |
MS.gene63306.t1 | MTR_7g080410 | 26.111 | 180 | 129 | 3 | 22 | 197 | 45 | 224 | 3.09e-11 | 62.8 |
MS.gene63306.t1 | MTR_3g087850 | 26.761 | 213 | 142 | 4 | 21 | 232 | 32 | 231 | 7.78e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63306.t1 | AT5G06060 | 69.767 | 258 | 78 | 0 | 12 | 269 | 6 | 263 | 3.57e-139 | 392 |
MS.gene63306.t1 | AT2G29260 | 61.176 | 255 | 99 | 0 | 12 | 266 | 65 | 319 | 2.61e-117 | 339 |
MS.gene63306.t1 | AT2G29290 | 59.922 | 257 | 101 | 1 | 12 | 266 | 4 | 260 | 2.92e-117 | 337 |
MS.gene63306.t1 | AT1G07440 | 60.075 | 268 | 101 | 3 | 1 | 266 | 1 | 264 | 6.65e-116 | 333 |
MS.gene63306.t1 | AT2G29150 | 60.377 | 265 | 103 | 2 | 1 | 264 | 1 | 264 | 1.20e-115 | 333 |
MS.gene63306.t1 | AT2G29360 | 59.387 | 261 | 106 | 0 | 4 | 264 | 5 | 265 | 2.23e-115 | 332 |
MS.gene63306.t1 | AT2G29350 | 59.470 | 264 | 106 | 1 | 1 | 264 | 1 | 263 | 1.88e-114 | 330 |
MS.gene63306.t1 | AT1G07450 | 59.684 | 253 | 101 | 1 | 12 | 264 | 5 | 256 | 1.68e-111 | 322 |
MS.gene63306.t1 | AT2G29330 | 60.853 | 258 | 97 | 3 | 12 | 266 | 4 | 260 | 1.22e-110 | 320 |
MS.gene63306.t1 | AT2G29340 | 57.529 | 259 | 108 | 1 | 12 | 268 | 4 | 262 | 1.21e-109 | 317 |
MS.gene63306.t1 | AT2G29340 | 57.977 | 257 | 106 | 1 | 12 | 266 | 4 | 260 | 4.28e-109 | 318 |
MS.gene63306.t1 | AT2G30670 | 58.893 | 253 | 104 | 0 | 12 | 264 | 4 | 256 | 1.19e-108 | 315 |
MS.gene63306.t1 | AT2G29370 | 55.172 | 261 | 117 | 0 | 4 | 264 | 5 | 265 | 5.13e-108 | 313 |
MS.gene63306.t1 | AT2G29320 | 58.755 | 257 | 103 | 2 | 13 | 266 | 11 | 267 | 7.26e-106 | 308 |
MS.gene63306.t1 | AT2G29310 | 57.312 | 253 | 108 | 0 | 12 | 264 | 4 | 256 | 1.90e-105 | 307 |
MS.gene63306.t1 | AT2G29290 | 58.403 | 238 | 97 | 1 | 31 | 266 | 6 | 243 | 9.60e-105 | 304 |
MS.gene63306.t1 | AT2G29300 | 56.977 | 258 | 108 | 2 | 12 | 266 | 4 | 261 | 2.57e-103 | 301 |
MS.gene63306.t1 | AT2G29300 | 56.800 | 250 | 107 | 1 | 12 | 260 | 4 | 253 | 6.66e-100 | 294 |
MS.gene63306.t1 | AT2G29350 | 59.111 | 225 | 91 | 1 | 40 | 264 | 2 | 225 | 7.61e-97 | 284 |
MS.gene63306.t1 | AT2G29320 | 57.741 | 239 | 98 | 2 | 31 | 266 | 11 | 249 | 3.47e-95 | 280 |
MS.gene63306.t1 | AT2G29310 | 55.983 | 234 | 103 | 0 | 31 | 264 | 21 | 254 | 2.21e-93 | 276 |
MS.gene63306.t1 | AT2G29350 | 60.784 | 204 | 80 | 0 | 1 | 204 | 1 | 204 | 2.05e-89 | 265 |
MS.gene63306.t1 | AT2G29340 | 56.566 | 198 | 86 | 0 | 12 | 209 | 4 | 201 | 1.05e-80 | 242 |
MS.gene63306.t1 | AT2G29340 | 56.566 | 198 | 86 | 0 | 12 | 209 | 4 | 201 | 1.05e-80 | 242 |
MS.gene63306.t1 | AT2G29310 | 56.566 | 198 | 86 | 0 | 12 | 209 | 4 | 201 | 1.35e-78 | 236 |
MS.gene63306.t1 | AT2G29320 | 59.162 | 191 | 77 | 1 | 13 | 202 | 11 | 201 | 7.25e-78 | 235 |
MS.gene63306.t1 | AT1G07440 | 58.721 | 172 | 68 | 1 | 1 | 172 | 1 | 169 | 7.10e-69 | 211 |
MS.gene63306.t1 | AT2G29310 | 54.749 | 179 | 81 | 0 | 31 | 209 | 21 | 199 | 3.31e-66 | 205 |
MS.gene63306.t1 | AT2G29170 | 58.824 | 102 | 41 | 1 | 1 | 101 | 1 | 102 | 2.54e-35 | 122 |
MS.gene63306.t1 | AT4G05530 | 32.520 | 246 | 161 | 5 | 15 | 259 | 9 | 250 | 2.13e-33 | 122 |
MS.gene63306.t1 | AT5G18210 | 32.950 | 261 | 160 | 7 | 10 | 259 | 3 | 259 | 8.28e-32 | 118 |
MS.gene63306.t1 | AT3G03980 | 30.855 | 269 | 167 | 7 | 6 | 259 | 5 | 269 | 2.40e-30 | 115 |
MS.gene63306.t1 | AT4G13180 | 32.819 | 259 | 164 | 8 | 10 | 261 | 8 | 263 | 2.61e-29 | 112 |
MS.gene63306.t1 | AT1G24360 | 30.364 | 247 | 159 | 7 | 21 | 261 | 80 | 319 | 6.84e-29 | 112 |
MS.gene63306.t1 | AT5G18210 | 32.234 | 273 | 156 | 9 | 10 | 271 | 3 | 257 | 6.89e-28 | 108 |
MS.gene63306.t1 | AT3G46170 | 29.457 | 258 | 171 | 7 | 15 | 263 | 26 | 281 | 7.86e-26 | 103 |
MS.gene63306.t1 | AT1G54870 | 33.852 | 257 | 157 | 8 | 15 | 262 | 84 | 336 | 2.18e-25 | 103 |
MS.gene63306.t1 | AT1G54870 | 33.852 | 257 | 157 | 8 | 15 | 262 | 82 | 334 | 2.28e-25 | 103 |
MS.gene63306.t1 | AT3G55310 | 30.769 | 260 | 165 | 11 | 15 | 263 | 17 | 272 | 2.33e-25 | 102 |
MS.gene63306.t1 | AT3G55290 | 30.000 | 260 | 167 | 11 | 15 | 263 | 18 | 273 | 8.98e-25 | 100 |
MS.gene63306.t1 | AT3G55290 | 29.344 | 259 | 170 | 9 | 15 | 263 | 17 | 272 | 9.09e-25 | 100 |
MS.gene63306.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 15 | 271 | 2.42e-24 | 99.4 |
MS.gene63306.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 19 | 275 | 2.88e-24 | 99.0 |
MS.gene63306.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 17 | 273 | 2.89e-24 | 99.0 |
MS.gene63306.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 14 | 270 | 3.57e-24 | 98.6 |
MS.gene63306.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 15 | 271 | 3.82e-24 | 98.6 |
MS.gene63306.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 22 | 278 | 3.84e-24 | 99.0 |
MS.gene63306.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 13 | 269 | 3.88e-24 | 98.6 |
MS.gene63306.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 19 | 275 | 4.06e-24 | 98.6 |
MS.gene63306.t1 | AT3G05260 | 33.208 | 265 | 165 | 7 | 6 | 262 | 28 | 288 | 4.59e-24 | 98.6 |
MS.gene63306.t1 | AT2G17845 | 28.897 | 263 | 171 | 9 | 15 | 264 | 47 | 306 | 1.99e-23 | 97.4 |
MS.gene63306.t1 | AT3G04000 | 31.734 | 271 | 165 | 8 | 4 | 258 | 3 | 269 | 3.55e-23 | 95.9 |
MS.gene63306.t1 | AT3G26760 | 29.323 | 266 | 170 | 7 | 8 | 260 | 30 | 290 | 4.53e-22 | 93.6 |
MS.gene63306.t1 | AT3G51680 | 33.166 | 199 | 123 | 5 | 15 | 205 | 32 | 228 | 5.98e-22 | 93.2 |
MS.gene63306.t1 | AT2G47120 | 28.947 | 266 | 169 | 13 | 11 | 267 | 2 | 256 | 1.96e-20 | 88.2 |
MS.gene63306.t1 | AT2G47120 | 29.008 | 262 | 166 | 13 | 15 | 267 | 7 | 257 | 2.84e-20 | 87.8 |
MS.gene63306.t1 | AT3G12800 | 26.070 | 257 | 174 | 7 | 15 | 259 | 10 | 262 | 4.44e-20 | 87.8 |
MS.gene63306.t1 | AT1G52340 | 29.278 | 263 | 164 | 8 | 15 | 260 | 18 | 275 | 1.87e-19 | 85.9 |
MS.gene63306.t1 | AT4G03140 | 26.562 | 256 | 174 | 6 | 15 | 260 | 78 | 329 | 3.79e-19 | 85.9 |
MS.gene63306.t1 | AT2G47130 | 29.457 | 258 | 169 | 9 | 11 | 261 | 2 | 253 | 2.59e-18 | 82.4 |
MS.gene63306.t1 | AT1G10310 | 34.132 | 167 | 107 | 3 | 19 | 184 | 19 | 183 | 1.63e-15 | 74.3 |
MS.gene63306.t1 | AT5G04900 | 31.492 | 181 | 116 | 6 | 21 | 195 | 83 | 261 | 2.62e-15 | 75.1 |
MS.gene63306.t1 | AT3G29260 | 30.798 | 263 | 159 | 13 | 11 | 261 | 2 | 253 | 7.33e-15 | 72.8 |
MS.gene63306.t1 | AT2G47140 | 27.843 | 255 | 170 | 8 | 15 | 261 | 6 | 254 | 2.25e-14 | 71.6 |
MS.gene63306.t1 | AT1G24470 | 27.053 | 207 | 134 | 6 | 17 | 213 | 52 | 251 | 4.44e-14 | 71.2 |
MS.gene63306.t1 | AT3G42960 | 28.794 | 257 | 159 | 9 | 20 | 260 | 13 | 261 | 5.75e-14 | 70.5 |
MS.gene63306.t1 | AT3G26770 | 25.940 | 266 | 175 | 7 | 15 | 264 | 41 | 300 | 1.60e-13 | 69.7 |
MS.gene63306.t1 | AT5G10050 | 26.291 | 213 | 143 | 4 | 21 | 232 | 11 | 210 | 1.77e-13 | 69.3 |
MS.gene63306.t1 | AT5G65205 | 30.000 | 180 | 115 | 5 | 21 | 197 | 12 | 183 | 1.97e-13 | 69.3 |
MS.gene63306.t1 | AT4G13250 | 25.391 | 256 | 152 | 8 | 21 | 243 | 165 | 414 | 3.51e-13 | 69.3 |
MS.gene63306.t1 | AT4G09750 | 30.144 | 209 | 122 | 6 | 15 | 205 | 41 | 243 | 4.80e-12 | 65.5 |
MS.gene63306.t1 | AT3G47350 | 26.636 | 214 | 142 | 7 | 17 | 221 | 46 | 253 | 5.77e-12 | 65.1 |
MS.gene63306.t1 | AT3G47350 | 26.636 | 214 | 142 | 7 | 17 | 221 | 46 | 253 | 7.04e-12 | 65.1 |
MS.gene63306.t1 | AT3G03330 | 26.904 | 197 | 139 | 3 | 6 | 197 | 32 | 228 | 7.24e-12 | 65.1 |
MS.gene63306.t1 | AT3G06060 | 25.743 | 202 | 143 | 2 | 9 | 207 | 48 | 245 | 7.99e-12 | 65.1 |
MS.gene63306.t1 | AT3G06060 | 25.743 | 202 | 143 | 2 | 9 | 207 | 31 | 228 | 8.10e-12 | 64.7 |
Find 54 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCACAGTTTACACTTGTTCT+AGG | 0.259656 | 3.3:-60334584 | MS.gene63306:CDS |
CATCCTCTGCTTAAAGAATC+TGG | 0.325649 | 3.3:-60334106 | MS.gene63306:CDS |
AATGGGCGAAAGACAATATA+AGG | 0.356013 | 3.3:-60333878 | MS.gene63306:CDS |
GGACAGATTGTTTCTGTTGA+TGG | 0.357615 | 3.3:-60332265 | MS.gene63306:CDS |
GGTTCTGCTATACGCTTTAT+CGG | 0.380929 | 3.3:+60332346 | None:intergenic |
GTTGAAGAACTCGCTGAGTT+TGG | 0.389672 | 3.3:-60334609 | MS.gene63306:CDS |
CTGCTTAAAGAATCTGGAAA+TGG | 0.406314 | 3.3:-60334100 | MS.gene63306:CDS |
GAAGCCAACAATTGAGTATA+CGG | 0.419549 | 3.3:-60334194 | MS.gene63306:CDS |
ACCGGCGGAACGCGTGGAAT+CGG | 0.443421 | 3.3:-60334642 | MS.gene63306:CDS |
GGATTAGGTAATCCTCATGC+TGG | 0.447027 | 3.3:+60332216 | None:intergenic |
GATGGAGGATTTACTGTGAA+TGG | 0.451398 | 3.3:-60332247 | MS.gene63306:CDS |
TCAGCCGTATACTCAATTGT+TGG | 0.456707 | 3.3:+60334190 | None:intergenic |
TCTCTCACAAGCATAGGTTC+TGG | 0.458121 | 3.3:-60334049 | MS.gene63306:CDS |
TGCATACCATCTATGTCAAT+TGG | 0.460251 | 3.3:-60334131 | MS.gene63306:CDS |
AGCGTTTATTCAGCTCCTCT+TGG | 0.468728 | 3.3:+60334559 | None:intergenic |
GAAAGTGATGACTACTAACT+TGG | 0.480086 | 3.3:-60334158 | MS.gene63306:CDS |
TCCGATTCCACGCGTTCCGC+CGG | 0.497124 | 3.3:+60334641 | None:intergenic |
TGAGTTTAGGTGAACAATGC+TGG | 0.497981 | 3.3:-60334229 | MS.gene63306:intron |
AAGAGCGGTGGTTCCCTTGA+GGG | 0.505200 | 3.3:+60334668 | None:intergenic |
CTTGTCACCGGCGGAACGCG+TGG | 0.512318 | 3.3:-60334648 | MS.gene63306:CDS |
CCAGCTGCTTCCTACATCAC+TGG | 0.520639 | 3.3:-60332286 | MS.gene63306:CDS |
ACCACATGAAGTGTCTTCCT+TGG | 0.531653 | 3.3:-60332326 | MS.gene63306:CDS |
AACGTGGCTTCTTCTTTCAA+CGG | 0.542163 | 3.3:-60334450 | MS.gene63306:CDS |
TGATGTAGGAAGCAGCTGGC+AGG | 0.543439 | 3.3:+60332290 | None:intergenic |
TTAAACGAGTGGAAAGAGAA+AGG | 0.546612 | 3.3:-60334537 | MS.gene63306:CDS |
AGCGTCTATGCAGCAAGTAA+AGG | 0.551642 | 3.3:-60334025 | MS.gene63306:intron |
AACAATCTGTCCAGTGATGT+AGG | 0.551671 | 3.3:+60332276 | None:intergenic |
GATGTACCAATTGACATAGA+TGG | 0.556385 | 3.3:+60334125 | None:intergenic |
GGAACCACCGCTCTTGTCAC+CGG | 0.562041 | 3.3:-60334660 | MS.gene63306:CDS |
TTTCCAGATTCTTTAAGCAG+AGG | 0.567292 | 3.3:+60334103 | None:intergenic |
GATTAGGTAATCCTCATGCT+GGG | 0.570838 | 3.3:+60332217 | None:intergenic |
AAGCTCAAGATGGTCCCTCA+AGG | 0.573784 | 3.3:-60334682 | MS.gene63306:CDS |
CAGATTGTTTCTGTTGATGG+AGG | 0.575569 | 3.3:-60332262 | MS.gene63306:CDS |
AGGAAGCAGCTGGCAGGCAA+AGG | 0.580855 | 3.3:+60332296 | None:intergenic |
CAAGAGCGGTGGTTCCCTTG+AGG | 0.592264 | 3.3:+60334667 | None:intergenic |
CCAGTGATGTAGGAAGCAGC+TGG | 0.595402 | 3.3:+60332286 | None:intergenic |
ATCATCTTCTTCTCAAAGAG+AGG | 0.596910 | 3.3:-60334484 | MS.gene63306:CDS |
AGCTCAAGATGGTCCCTCAA+GGG | 0.601552 | 3.3:-60334681 | MS.gene63306:CDS |
AGCATTACATGTTCCACAAG+TGG | 0.604747 | 3.3:+60333822 | None:intergenic |
GTTGCATCTCTCACAAGCAT+AGG | 0.610660 | 3.3:-60334055 | MS.gene63306:CDS |
GCAGTAGCAGAAGCTCAAGA+TGG | 0.612756 | 3.3:-60334692 | MS.gene63306:CDS |
ATGGATTTCAACCCAGCATG+AGG | 0.617391 | 3.3:-60332228 | MS.gene63306:CDS |
TGAATAAACGCTTAAACGAG+TGG | 0.622975 | 3.3:-60334548 | MS.gene63306:CDS |
CGTTCCGCCGGTGACAAGAG+CGG | 0.623119 | 3.3:+60334653 | None:intergenic |
GGAGCAACTGCGTTGCACCC+TGG | 0.632107 | 3.3:-60333857 | MS.gene63306:CDS |
TCCGCCGGTGACAAGAGCGG+TGG | 0.632560 | 3.3:+60334656 | None:intergenic |
GTATACGAAAACACCACTTG+TGG | 0.645433 | 3.3:-60333835 | MS.gene63306:CDS |
ACCACCGCTCTTGTCACCGG+CGG | 0.656160 | 3.3:-60334657 | MS.gene63306:CDS |
AGAGGAGCTTATTCGAAACG+TGG | 0.683344 | 3.3:-60334466 | MS.gene63306:CDS |
CACTTGTTCTAGGAACCAAG+AGG | 0.692789 | 3.3:-60334574 | MS.gene63306:CDS |
ACCAAGGAAGACACTTCATG+TGG | 0.707139 | 3.3:+60332325 | None:intergenic |
CAGGCAAAGGAAAGTCACCA+AGG | 0.712267 | 3.3:+60332309 | None:intergenic |
CCTAGAACAAGTGTAAACTG+TGG | 0.737540 | 3.3:+60334584 | None:intergenic |
ACAATGCTGGAACAAATGTG+AGG | 0.761871 | 3.3:-60334216 | MS.gene63306:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTAGTATTAATCTATAAA+TGG | - | chr3.3:60334465-60334484 | MS.gene63306:CDS | 15.0% |
!! | CAAAAGAAAATATATAGAAA+AGG | + | chr3.3:60332529-60332548 | None:intergenic | 15.0% |
!!! | TATTCTTCTATTTTGTTATT+AGG | - | chr3.3:60333257-60333276 | MS.gene63306:intron | 15.0% |
!! | AATTCTTTAGATTATTGAAC+AGG | - | chr3.3:60333400-60333419 | MS.gene63306:intron | 20.0% |
!! | ATCCATTATATTTAAGCAAA+AGG | + | chr3.3:60332958-60332977 | None:intergenic | 20.0% |
!! | TAGAACCAAAAAGAATAAAT+TGG | - | chr3.3:60333668-60333687 | MS.gene63306:intron | 20.0% |
!! | TTTGTAATCATGATTTGATT+TGG | - | chr3.3:60333190-60333209 | MS.gene63306:intron | 20.0% |
!!! | AACCTTTTGCTTAAATATAA+TGG | - | chr3.3:60332953-60332972 | MS.gene63306:intron | 20.0% |
!!! | AGTAACCAATTTATTCTTTT+TGG | + | chr3.3:60333676-60333695 | None:intergenic | 20.0% |
!!! | TTTTGCTTAAATATAATGGA+TGG | - | chr3.3:60332957-60332976 | MS.gene63306:intron | 20.0% |
! | AAAAAATCTTGCTTGTGAAT+GGG | - | chr3.3:60333032-60333051 | MS.gene63306:intron | 25.0% |
! | AACTTCAATTATTCATTCCA+TGG | - | chr3.3:60333135-60333154 | MS.gene63306:intron | 25.0% |
! | ATCAAAATTGCTTGCATATT+TGG | - | chr3.3:60333426-60333445 | MS.gene63306:intron | 25.0% |
! | ATGTATATGATACACAATTG+TGG | - | chr3.3:60334003-60334022 | MS.gene63306:intron | 25.0% |
! | ATTCATTTAGTATTGCATAC+AGG | - | chr3.3:60333901-60333920 | MS.gene63306:CDS | 25.0% |
! | ATTGAAGATATATCCAATGT+CGG | + | chr3.3:60332622-60332641 | None:intergenic | 25.0% |
! | CAATGTAATTACTTCCATAA+AGG | - | chr3.3:60333566-60333585 | MS.gene63306:intron | 25.0% |
! | CATACGAATAAGAAATGAAT+TGG | - | chr3.3:60334209-60334228 | MS.gene63306:CDS | 25.0% |
! | TAAAAAAAATGACAAAGCCA+TGG | + | chr3.3:60333155-60333174 | None:intergenic | 25.0% |
! | TACTCTTATCACAAGTTTAA+TGG | - | chr3.3:60333495-60333514 | MS.gene63306:intron | 25.0% |
! | TCAAAATTGCTTGCATATTT+GGG | - | chr3.3:60333427-60333446 | MS.gene63306:intron | 25.0% |
! | TGATTATCAAATGACCTTTA+TGG | + | chr3.3:60333583-60333602 | None:intergenic | 25.0% |
! | TTCATTTAGTATTGCATACA+GGG | - | chr3.3:60333902-60333921 | MS.gene63306:CDS | 25.0% |
!! | GACATAGTAAAACATGATTT+TGG | + | chr3.3:60334063-60334082 | None:intergenic | 25.0% |
!!! | ACATTCATACTCATTTTTGT+AGG | - | chr3.3:60333319-60333338 | MS.gene63306:intron | 25.0% |
AATTCACAATATTTGCACCT+AGG | - | chr3.3:60333627-60333646 | MS.gene63306:intron | 30.0% | |
AGTCCTCAACTATAAAAGAT+TGG | + | chr3.3:60334085-60334104 | None:intergenic | 30.0% | |
ATAGTTGAGGACTGTATATT+TGG | - | chr3.3:60334092-60334111 | MS.gene63306:CDS | 30.0% | |
ATTAATACTACATGAGCACA+CGG | + | chr3.3:60334458-60334477 | None:intergenic | 30.0% | |
ATTCACAATATTTGCACCTA+GGG | - | chr3.3:60333628-60333647 | MS.gene63306:intron | 30.0% | |
ATTGGTCATTGTTTAATCAG+GGG | - | chr3.3:60333227-60333246 | MS.gene63306:intron | 30.0% | |
ATTGTTTAATCAGGGGAATA+TGG | - | chr3.3:60333234-60333253 | MS.gene63306:intron | 30.0% | |
CAAAAAATCTTGCTTGTGAA+TGG | - | chr3.3:60333031-60333050 | MS.gene63306:intron | 30.0% | |
TATGATGTTCTTGTGAGTTT+AGG | - | chr3.3:60332685-60332704 | MS.gene63306:intron | 30.0% | |
TTAAACAATGACCAATCAGT+CGG | + | chr3.3:60333223-60333242 | None:intergenic | 30.0% | |
! | ATATCTTCAATCAGAAGTGT+CGG | - | chr3.3:60332631-60332650 | MS.gene63306:intron | 30.0% |
! | GAGAAAGGTTTTTCTGTTTA+TGG | - | chr3.3:60332405-60332424 | MS.gene63306:intron | 30.0% |
! | GATTGGTCATTGTTTAATCA+GGG | - | chr3.3:60333226-60333245 | MS.gene63306:intron | 30.0% |
! | TGATTGGTCATTGTTTAATC+AGG | - | chr3.3:60333225-60333244 | MS.gene63306:intron | 30.0% |
! | TGTCCAATCTTTTATAGTTG+AGG | - | chr3.3:60334079-60334098 | MS.gene63306:CDS | 30.0% |
! | TTAATGGTTTTCCATGTTGA+CGG | - | chr3.3:60333511-60333530 | MS.gene63306:intron | 30.0% |
!! | AAGAAATGAATTGGCTTTGA+GGG | - | chr3.3:60334218-60334237 | MS.gene63306:CDS | 30.0% |
!! | TAAGAAATGAATTGGCTTTG+AGG | - | chr3.3:60334217-60334236 | MS.gene63306:CDS | 30.0% |
!!! | ACTTTTTTGTTAAGACGCAT+GGG | - | chr3.3:60334261-60334280 | MS.gene63306:intron | 30.0% |
!!! | TTTTGGTTCTAACTGACAAA+TGG | + | chr3.3:60333659-60333678 | None:intergenic | 30.0% |
AATGGGCGAAAGACAATATA+AGG | - | chr3.3:60333049-60333068 | MS.gene63306:intron | 35.0% | |
AATTGCTTGCATATTTGGGA+TGG | - | chr3.3:60333431-60333450 | MS.gene63306:intron | 35.0% | |
ACATACGTGAATCAAACAGA+AGG | + | chr3.3:60333987-60334006 | None:intergenic | 35.0% | |
ATCATCTTCTTCTCAAAGAG+AGG | - | chr3.3:60332443-60332462 | MS.gene63306:intron | 35.0% | |
ATCCCTTCACAAATTGTCTA+TGG | - | chr3.3:60333802-60333821 | MS.gene63306:intron | 35.0% | |
CTGCTTAAAGAATCTGGAAA+TGG | - | chr3.3:60332827-60332846 | MS.gene63306:intron | 35.0% | |
GAAAGTGATGACTACTAACT+TGG | - | chr3.3:60332769-60332788 | MS.gene63306:intron | 35.0% | |
GAAGCCAACAATTGAGTATA+CGG | - | chr3.3:60332733-60332752 | MS.gene63306:intron | 35.0% | |
GATGTACCAATTGACATAGA+TGG | + | chr3.3:60332805-60332824 | None:intergenic | 35.0% | |
TAATCGTCAGTGTTGTCAAA+TGG | + | chr3.3:60333867-60333886 | None:intergenic | 35.0% | |
TGAATAAACGCTTAAACGAG+TGG | - | chr3.3:60332379-60332398 | MS.gene63306:CDS | 35.0% | |
TGCATACCATCTATGTCAAT+TGG | - | chr3.3:60332796-60332815 | MS.gene63306:intron | 35.0% | |
TTAAACGAGTGGAAAGAGAA+AGG | - | chr3.3:60332390-60332409 | MS.gene63306:CDS | 35.0% | |
TTTCCAGATTCTTTAAGCAG+AGG | + | chr3.3:60332827-60332846 | None:intergenic | 35.0% | |
! | GATACATTTTTCCGTCAACA+TGG | + | chr3.3:60333525-60333544 | None:intergenic | 35.0% |
! | TGGAGGATTTTCTGCTATAT+AGG | - | chr3.3:60334383-60334402 | MS.gene63306:intron | 35.0% |
!! | ATGATTTTGGCATCTTCACA+TGG | + | chr3.3:60334050-60334069 | None:intergenic | 35.0% |
!!! | GACTTTTTTGTTAAGACGCA+TGG | - | chr3.3:60334260-60334279 | MS.gene63306:intron | 35.0% |
AACAATCTGTCCAGTGATGT+AGG | + | chr3.3:60334654-60334673 | None:intergenic | 40.0% | |
AACAGAAGGCAGTGGAATTA+TGG | + | chr3.3:60333973-60333992 | None:intergenic | 40.0% | |
AACGTGGCTTCTTCTTTCAA+CGG | - | chr3.3:60332477-60332496 | MS.gene63306:intron | 40.0% | |
ACAATGCTGGAACAAATGTG+AGG | - | chr3.3:60332711-60332730 | MS.gene63306:intron | 40.0% | |
ACAGTTGTAGCAAGTGATTC+TGG | - | chr3.3:60334153-60334172 | MS.gene63306:CDS | 40.0% | |
AGCATTACATGTTCCACAAG+TGG | + | chr3.3:60333108-60333127 | None:intergenic | 40.0% | |
CACATGGATCAAGGTAACAT+TGG | + | chr3.3:60334034-60334053 | None:intergenic | 40.0% | |
CAGTTGTAGCAAGTGATTCT+GGG | - | chr3.3:60334154-60334173 | MS.gene63306:CDS | 40.0% | |
CATCCTCTGCTTAAAGAATC+TGG | - | chr3.3:60332821-60332840 | MS.gene63306:intron | 40.0% | |
CCACAGTTTACACTTGTTCT+AGG | - | chr3.3:60332343-60332362 | MS.gene63306:CDS | 40.0% | |
CCTAGAACAAGTGTAAACTG+TGG | + | chr3.3:60332346-60332365 | None:intergenic | 40.0% | |
CCTTCACAAATTGTCTATGG+CGG | - | chr3.3:60333805-60333824 | MS.gene63306:intron | 40.0% | |
CGCCATAGACAATTTGTGAA+GGG | + | chr3.3:60333807-60333826 | None:intergenic | 40.0% | |
GAGGACTGTATATTTGGATC+TGG | - | chr3.3:60334098-60334117 | MS.gene63306:CDS | 40.0% | |
GATGGAGGATTTACTGTGAA+TGG | - | chr3.3:60334680-60334699 | MS.gene63306:CDS | 40.0% | |
GGGCATCAATATGGCAAATA+TGG | - | chr3.3:60334238-60334257 | MS.gene63306:intron | 40.0% | |
GGTTCTGCTATACGCTTTAT+CGG | + | chr3.3:60334584-60334603 | None:intergenic | 40.0% | |
GTACTTGTCTGTAGTCTTTG+AGG | - | chr3.3:60333371-60333390 | MS.gene63306:intron | 40.0% | |
GTATACGAAAACACCACTTG+TGG | - | chr3.3:60333092-60333111 | MS.gene63306:intron | 40.0% | |
TCAGCCGTATACTCAATTGT+TGG | + | chr3.3:60332740-60332759 | None:intergenic | 40.0% | |
TGAGTTTAGGTGAACAATGC+TGG | - | chr3.3:60332698-60332717 | MS.gene63306:intron | 40.0% | |
TGGCTCTTTAACATCTTTCC+TGG | - | chr3.3:60334286-60334305 | MS.gene63306:intron | 40.0% | |
TTGGATGAATTCCGACTGAT+TGG | - | chr3.3:60333209-60333228 | MS.gene63306:intron | 40.0% | |
TTTGTTAAGACGCATGGGTT+TGG | - | chr3.3:60334266-60334285 | MS.gene63306:intron | 40.0% | |
! | AAGTGGTGTTTTCGTATACC+AGG | + | chr3.3:60333091-60333110 | None:intergenic | 40.0% |
! | AGTGGTGTTTTCGTATACCA+GGG | + | chr3.3:60333090-60333109 | None:intergenic | 40.0% |
! | GTTGGTTTATCTGTGTATGG+AGG | - | chr3.3:60334366-60334385 | MS.gene63306:intron | 40.0% |
!! | CAGATTGTTTCTGTTGATGG+AGG | - | chr3.3:60334665-60334684 | MS.gene63306:CDS | 40.0% |
!! | GGACAGATTGTTTCTGTTGA+TGG | - | chr3.3:60334662-60334681 | MS.gene63306:CDS | 40.0% |
!! | GTGGTTGGTTTATCTGTGTA+TGG | - | chr3.3:60334363-60334382 | MS.gene63306:intron | 40.0% |
ACCAAGGAAGACACTTCATG+TGG | + | chr3.3:60334605-60334624 | None:intergenic | 45.0% | |
AGAGGAGCTTATTCGAAACG+TGG | - | chr3.3:60332461-60332480 | MS.gene63306:intron | 45.0% | |
AGCGTCTATGCAGCAAGTAA+AGG | - | chr3.3:60332902-60332921 | MS.gene63306:intron | 45.0% | |
AGCGTTTATTCAGCTCCTCT+TGG | + | chr3.3:60332371-60332390 | None:intergenic | 45.0% | |
ATGGATTTCAACCCAGCATG+AGG | - | chr3.3:60334699-60334718 | MS.gene63306:CDS | 45.0% | |
CCGCCATAGACAATTTGTGA+AGG | + | chr3.3:60333808-60333827 | None:intergenic | 45.0% | |
CGATGGTGCAATATGACAGA+AGG | - | chr3.3:60333725-60333744 | MS.gene63306:intron | 45.0% | |
GTGAATCAAACAGAAGGCAG+TGG | + | chr3.3:60333981-60334000 | None:intergenic | 45.0% | |
GTGATTACCAGTGTTGTCGA+TGG | - | chr3.3:60333708-60333727 | MS.gene63306:intron | 45.0% | |
GTTGAAGAACTCGCTGAGTT+TGG | - | chr3.3:60332318-60332337 | MS.gene63306:CDS | 45.0% | |
GTTGCATCTCTCACAAGCAT+AGG | - | chr3.3:60332872-60332891 | MS.gene63306:intron | 45.0% | |
TATTGCACCATCGACAACAC+TGG | + | chr3.3:60333718-60333737 | None:intergenic | 45.0% | |
TCTCTCACAAGCATAGGTTC+TGG | - | chr3.3:60332878-60332897 | MS.gene63306:intron | 45.0% | |
TGGCATCTTCACATGGATCA+AGG | + | chr3.3:60334043-60334062 | None:intergenic | 45.0% | |
TTGTAGCAAGTGATTCTGGG+TGG | - | chr3.3:60334157-60334176 | MS.gene63306:CDS | 45.0% | |
! | ACCACATGAAGTGTCTTCCT+TGG | - | chr3.3:60334601-60334620 | MS.gene63306:CDS | 45.0% |
! | GCTGCAATGGCGTATTTCTA+TGG | + | chr3.3:60333761-60333780 | None:intergenic | 45.0% |
!! | CACTTGTTCTAGGAACCAAG+AGG | - | chr3.3:60332353-60332372 | MS.gene63306:CDS | 45.0% |
!! | TGGCTTTGAGGGCATCAATA+TGG | - | chr3.3:60334229-60334248 | MS.gene63306:intron | 45.0% |
AAGCTCAAGATGGTCCCTCA+AGG | - | chr3.3:60332245-60332264 | MS.gene63306:CDS | 50.0% | |
ACCACCTACACAAACACAGC+AGG | + | chr3.3:60334348-60334367 | None:intergenic | 50.0% | |
ACTAGAGCATGTGCAGATCC+AGG | + | chr3.3:60334307-60334326 | None:intergenic | 50.0% | |
AGCTCAAGATGGTCCCTCAA+GGG | - | chr3.3:60332246-60332265 | MS.gene63306:CDS | 50.0% | |
CAGGCAAAGGAAAGTCACCA+AGG | + | chr3.3:60334621-60334640 | None:intergenic | 50.0% | |
CATGTGTCTGTGTCCGACAT+TGG | - | chr3.3:60332606-60332625 | MS.gene63306:intron | 50.0% | |
GCAGTAGCAGAAGCTCAAGA+TGG | - | chr3.3:60332235-60332254 | MS.gene63306:CDS | 50.0% | |
GCTGTGTTTGTGTAGGTGGT+TGG | - | chr3.3:60334348-60334367 | MS.gene63306:intron | 50.0% | |
GTGTTGTCAAATGGCTGCCA+TGG | + | chr3.3:60333858-60333877 | None:intergenic | 50.0% | |
TGTGCCTGCTGTGTTTGTGT+AGG | - | chr3.3:60334341-60334360 | MS.gene63306:intron | 50.0% | |
AAGAGCGGTGGTTCCCTTGA+GGG | + | chr3.3:60332262-60332281 | None:intergenic | 55.0% | |
ACCGACACGTCATTCTGCCA+TGG | - | chr3.3:60333838-60333857 | MS.gene63306:CDS | 55.0% | |
CCAGCTGCTTCCTACATCAC+TGG | - | chr3.3:60334641-60334660 | MS.gene63306:CDS | 55.0% | |
CCAGTGATGTAGGAAGCAGC+TGG | + | chr3.3:60334644-60334663 | None:intergenic | 55.0% | |
CTGACAAATGGCGCTTCCCT+AGG | + | chr3.3:60333647-60333666 | None:intergenic | 55.0% | |
GCCATGGCAGAATGACGTGT+CGG | + | chr3.3:60333842-60333861 | None:intergenic | 55.0% | |
GCCTGCTGTGTTTGTGTAGG+TGG | - | chr3.3:60334344-60334363 | MS.gene63306:intron | 55.0% | |
TGATGTAGGAAGCAGCTGGC+AGG | + | chr3.3:60334640-60334659 | None:intergenic | 55.0% | |
TGGCATGGCATAGGCTGCAA+TGG | + | chr3.3:60333774-60333793 | None:intergenic | 55.0% | |
TTGCAGCCTATGCCATGCCA+TGG | - | chr3.3:60333774-60333793 | MS.gene63306:intron | 55.0% | |
TTGTGAAGGGATGCCTGCCA+TGG | + | chr3.3:60333794-60333813 | None:intergenic | 55.0% | |
AAGGGATGCCTGCCATGGCA+TGG | + | chr3.3:60333789-60333808 | None:intergenic | 60.0% | |
AGCCTATGCCATGCCATGGC+AGG | - | chr3.3:60333778-60333797 | MS.gene63306:intron | 60.0% | |
AGGAAGCAGCTGGCAGGCAA+AGG | + | chr3.3:60334634-60334653 | None:intergenic | 60.0% | |
CAAGAGCGGTGGTTCCCTTG+AGG | + | chr3.3:60332263-60332282 | None:intergenic | 60.0% | |
GGAACCACCGCTCTTGTCAC+CGG | - | chr3.3:60332267-60332286 | MS.gene63306:CDS | 60.0% | |
TGCCTGCCATGGCATGGCAT+AGG | + | chr3.3:60333783-60333802 | None:intergenic | 60.0% | |
ACCACCGCTCTTGTCACCGG+CGG | - | chr3.3:60332270-60332289 | MS.gene63306:CDS | 65.0% | |
ACCGGCGGAACGCGTGGAAT+CGG | - | chr3.3:60332285-60332304 | MS.gene63306:CDS | 65.0% | |
CGTTCCGCCGGTGACAAGAG+CGG | + | chr3.3:60332277-60332296 | None:intergenic | 65.0% | |
GGAGCAACTGCGTTGCACCC+TGG | - | chr3.3:60333070-60333089 | MS.gene63306:intron | 65.0% | |
TCCGATTCCACGCGTTCCGC+CGG | + | chr3.3:60332289-60332308 | None:intergenic | 65.0% | |
CTTGTCACCGGCGGAACGCG+TGG | - | chr3.3:60332279-60332298 | MS.gene63306:CDS | 70.0% | |
TCCGCCGGTGACAAGAGCGG+TGG | + | chr3.3:60332274-60332293 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 60332219 | 60334730 | 60332219 | ID=MS.gene63306 |
chr3.3 | mRNA | 60332219 | 60334730 | 60332219 | ID=MS.gene63306.t1;Parent=MS.gene63306 |
chr3.3 | exon | 60334434 | 60334730 | 60334434 | ID=MS.gene63306.t1.exon1;Parent=MS.gene63306.t1 |
chr3.3 | CDS | 60334434 | 60334730 | 60334434 | ID=cds.MS.gene63306.t1;Parent=MS.gene63306.t1 |
chr3.3 | exon | 60334026 | 60334242 | 60334026 | ID=MS.gene63306.t1.exon2;Parent=MS.gene63306.t1 |
chr3.3 | CDS | 60334026 | 60334242 | 60334026 | ID=cds.MS.gene63306.t1;Parent=MS.gene63306.t1 |
chr3.3 | exon | 60333830 | 60333936 | 60333830 | ID=MS.gene63306.t1.exon3;Parent=MS.gene63306.t1 |
chr3.3 | CDS | 60333830 | 60333936 | 60333830 | ID=cds.MS.gene63306.t1;Parent=MS.gene63306.t1 |
chr3.3 | exon | 60332219 | 60332413 | 60332219 | ID=MS.gene63306.t1.exon4;Parent=MS.gene63306.t1 |
chr3.3 | CDS | 60332219 | 60332413 | 60332219 | ID=cds.MS.gene63306.t1;Parent=MS.gene63306.t1 |
Gene Sequence |
Protein sequence |