Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63300.t1 | XP_013460715.1 | 96.7 | 275 | 9 | 0 | 1 | 275 | 1 | 275 | 1.10E-146 | 529.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63300.t1 | Q9LHT0 | 65.6 | 259 | 89 | 0 | 15 | 273 | 5 | 263 | 4.7e-98 | 359.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63300.t1 | A0A072UY64 | 96.7 | 275 | 9 | 0 | 1 | 275 | 1 | 275 | 7.9e-147 | 529.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63300.t1 | MTR_3g068155 | 96.727 | 275 | 9 | 0 | 1 | 275 | 1 | 275 | 0.0 | 551 |
MS.gene63300.t1 | MTR_3g068175 | 78.676 | 272 | 58 | 0 | 4 | 275 | 2 | 273 | 1.10e-158 | 442 |
MS.gene63300.t1 | MTR_3g068175 | 77.536 | 276 | 58 | 1 | 4 | 275 | 2 | 277 | 3.84e-156 | 436 |
MS.gene63300.t1 | MTR_3g068085 | 77.432 | 257 | 58 | 0 | 19 | 275 | 15 | 271 | 1.07e-151 | 424 |
MS.gene63300.t1 | MTR_3g068070 | 75.769 | 260 | 63 | 0 | 9 | 268 | 5 | 264 | 1.82e-149 | 419 |
MS.gene63300.t1 | MTR_3g068065 | 73.438 | 256 | 68 | 0 | 19 | 274 | 17 | 272 | 1.21e-142 | 402 |
MS.gene63300.t1 | MTR_4g064883 | 64.591 | 257 | 91 | 0 | 15 | 271 | 10 | 266 | 1.85e-129 | 368 |
MS.gene63300.t1 | MTR_4g064887 | 61.776 | 259 | 99 | 0 | 7 | 265 | 3 | 261 | 2.42e-121 | 347 |
MS.gene63300.t1 | MTR_7g063320 | 58.175 | 263 | 106 | 1 | 7 | 265 | 3 | 265 | 4.15e-110 | 319 |
MS.gene63300.t1 | MTR_7g063390 | 58.846 | 260 | 103 | 1 | 10 | 265 | 7 | 266 | 1.68e-106 | 310 |
MS.gene63300.t1 | MTR_7g063270 | 57.364 | 258 | 107 | 1 | 10 | 264 | 7 | 264 | 2.85e-105 | 306 |
MS.gene63300.t1 | MTR_7g063330 | 56.489 | 262 | 111 | 1 | 6 | 264 | 2 | 263 | 3.42e-105 | 306 |
MS.gene63300.t1 | MTR_7g063360 | 57.692 | 260 | 106 | 1 | 10 | 265 | 7 | 266 | 7.63e-104 | 303 |
MS.gene63300.t1 | MTR_7g063260 | 55.985 | 259 | 110 | 1 | 10 | 264 | 7 | 265 | 8.74e-102 | 298 |
MS.gene63300.t1 | MTR_4g064883 | 66.162 | 198 | 67 | 0 | 15 | 212 | 10 | 207 | 1.18e-96 | 283 |
MS.gene63300.t1 | MTR_4g064887 | 60.891 | 202 | 79 | 0 | 7 | 208 | 3 | 204 | 1.98e-90 | 267 |
MS.gene63300.t1 | MTR_7g063270 | 48.837 | 258 | 80 | 4 | 10 | 264 | 7 | 215 | 1.79e-78 | 237 |
MS.gene63300.t1 | MTR_4g132850 | 32.787 | 244 | 159 | 4 | 21 | 263 | 9 | 248 | 2.20e-31 | 117 |
MS.gene63300.t1 | MTR_3g085740 | 32.099 | 243 | 160 | 4 | 25 | 265 | 81 | 320 | 8.95e-30 | 114 |
MS.gene63300.t1 | MTR_7g071680 | 32.847 | 274 | 148 | 7 | 19 | 264 | 29 | 294 | 8.06e-29 | 111 |
MS.gene63300.t1 | MTR_7g094520 | 31.154 | 260 | 161 | 8 | 15 | 263 | 7 | 259 | 7.19e-26 | 102 |
MS.gene63300.t1 | MTR_7g094510 | 30.435 | 253 | 162 | 7 | 19 | 262 | 6 | 253 | 7.36e-26 | 102 |
MS.gene63300.t1 | MTR_4g052350 | 32.000 | 250 | 163 | 6 | 19 | 265 | 14 | 259 | 5.53e-25 | 100 |
MS.gene63300.t1 | MTR_1196s0010 | 31.818 | 242 | 154 | 5 | 24 | 262 | 279 | 512 | 1.70e-24 | 102 |
MS.gene63300.t1 | MTR_4g058810 | 27.586 | 261 | 176 | 9 | 18 | 268 | 10 | 267 | 7.03e-23 | 95.1 |
MS.gene63300.t1 | MTR_4g052320 | 29.600 | 250 | 170 | 5 | 19 | 265 | 8 | 254 | 2.22e-22 | 93.6 |
MS.gene63300.t1 | MTR_4g058840 | 28.462 | 260 | 173 | 9 | 19 | 268 | 11 | 267 | 2.38e-22 | 93.6 |
MS.gene63300.t1 | MTR_4g058820 | 28.462 | 260 | 173 | 9 | 19 | 268 | 11 | 267 | 2.38e-22 | 93.6 |
MS.gene63300.t1 | MTR_4g052300 | 29.200 | 250 | 170 | 6 | 19 | 265 | 8 | 253 | 8.59e-22 | 92.0 |
MS.gene63300.t1 | MTR_7g107670 | 28.731 | 268 | 173 | 8 | 10 | 266 | 26 | 286 | 2.72e-21 | 91.3 |
MS.gene63300.t1 | MTR_7g083870 | 31.047 | 277 | 165 | 9 | 6 | 264 | 19 | 287 | 7.79e-21 | 90.1 |
MS.gene63300.t1 | MTR_4g078630 | 29.344 | 259 | 164 | 8 | 19 | 264 | 19 | 271 | 8.42e-21 | 89.7 |
MS.gene63300.t1 | MTR_4g052340 | 28.030 | 264 | 166 | 8 | 19 | 267 | 14 | 268 | 9.73e-21 | 89.4 |
MS.gene63300.t1 | MTR_8g442750 | 29.545 | 264 | 155 | 8 | 19 | 263 | 14 | 265 | 3.16e-20 | 88.6 |
MS.gene63300.t1 | MTR_5g098650 | 80.392 | 51 | 10 | 0 | 225 | 275 | 124 | 174 | 7.56e-20 | 84.7 |
MS.gene63300.t1 | MTR_3g020670 | 31.136 | 273 | 169 | 11 | 5 | 264 | 4 | 270 | 1.76e-18 | 83.2 |
MS.gene63300.t1 | MTR_4g131740 | 28.794 | 257 | 171 | 6 | 18 | 265 | 39 | 292 | 2.10e-18 | 83.2 |
MS.gene63300.t1 | MTR_1g068955 | 29.070 | 258 | 158 | 9 | 19 | 261 | 14 | 261 | 2.74e-17 | 80.1 |
MS.gene63300.t1 | MTR_6g023990 | 28.736 | 261 | 174 | 8 | 11 | 263 | 6 | 262 | 5.21e-17 | 79.0 |
MS.gene63300.t1 | MTR_7g110130 | 28.295 | 258 | 174 | 8 | 16 | 266 | 3 | 256 | 9.60e-16 | 75.5 |
MS.gene63300.t1 | MTR_1g082760 | 26.357 | 258 | 177 | 7 | 19 | 267 | 40 | 293 | 1.17e-15 | 75.5 |
MS.gene63300.t1 | MTR_3g068075 | 52.239 | 67 | 31 | 1 | 127 | 192 | 1 | 67 | 1.77e-15 | 70.5 |
MS.gene63300.t1 | MTR_7g105460 | 27.798 | 277 | 176 | 11 | 10 | 274 | 4 | 268 | 2.16e-15 | 74.7 |
MS.gene63300.t1 | MTR_6g023590 | 28.854 | 253 | 168 | 8 | 19 | 263 | 13 | 261 | 2.38e-15 | 74.3 |
MS.gene63300.t1 | MTR_4g058830 | 29.747 | 158 | 105 | 5 | 116 | 268 | 57 | 213 | 2.70e-15 | 73.6 |
MS.gene63300.t1 | MTR_1g051165 | 25.670 | 261 | 182 | 7 | 19 | 267 | 14 | 274 | 4.85e-15 | 73.6 |
MS.gene63300.t1 | MTR_2g090165 | 28.794 | 257 | 173 | 9 | 16 | 266 | 3 | 255 | 1.69e-14 | 72.0 |
MS.gene63300.t1 | MTR_1579s0020 | 36.364 | 88 | 55 | 1 | 185 | 272 | 1 | 87 | 1.78e-14 | 67.8 |
MS.gene63300.t1 | MTR_6g023950 | 28.854 | 253 | 168 | 8 | 19 | 263 | 13 | 261 | 2.22e-14 | 71.6 |
MS.gene63300.t1 | MTR_7g105580 | 25.806 | 248 | 160 | 6 | 19 | 262 | 8 | 235 | 4.04e-14 | 70.9 |
MS.gene63300.t1 | MTR_7g105590 | 28.497 | 193 | 129 | 6 | 14 | 203 | 5 | 191 | 6.67e-14 | 68.9 |
MS.gene63300.t1 | MTR_6g023600 | 29.249 | 253 | 167 | 8 | 19 | 263 | 13 | 261 | 2.40e-13 | 68.6 |
MS.gene63300.t1 | MTR_8g089575 | 28.972 | 214 | 141 | 6 | 21 | 227 | 47 | 256 | 3.31e-13 | 68.9 |
MS.gene63300.t1 | MTR_7g110140 | 27.099 | 262 | 181 | 8 | 16 | 271 | 3 | 260 | 1.11e-11 | 63.9 |
MS.gene63300.t1 | MTR_8g044240 | 26.087 | 184 | 129 | 4 | 19 | 196 | 69 | 251 | 3.35e-11 | 63.2 |
MS.gene63300.t1 | MTR_7g105570 | 25.229 | 218 | 147 | 8 | 66 | 274 | 15 | 225 | 6.24e-11 | 61.2 |
MS.gene63300.t1 | MTR_3g113870 | 26.667 | 180 | 126 | 4 | 32 | 209 | 34 | 209 | 7.47e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63300.t1 | AT5G06060 | 65.637 | 259 | 89 | 0 | 15 | 273 | 5 | 263 | 1.59e-132 | 375 |
MS.gene63300.t1 | AT2G29260 | 61.719 | 256 | 98 | 0 | 15 | 270 | 64 | 319 | 2.82e-120 | 347 |
MS.gene63300.t1 | AT2G29290 | 62.403 | 258 | 95 | 1 | 15 | 270 | 3 | 260 | 3.80e-119 | 342 |
MS.gene63300.t1 | AT1G07440 | 61.240 | 258 | 97 | 2 | 15 | 270 | 8 | 264 | 1.89e-118 | 340 |
MS.gene63300.t1 | AT1G07450 | 62.598 | 254 | 94 | 1 | 15 | 268 | 4 | 256 | 7.58e-118 | 338 |
MS.gene63300.t1 | AT2G29150 | 60.227 | 264 | 102 | 2 | 9 | 270 | 6 | 268 | 5.78e-116 | 334 |
MS.gene63300.t1 | AT2G29360 | 60.385 | 260 | 103 | 0 | 9 | 268 | 6 | 265 | 7.67e-115 | 331 |
MS.gene63300.t1 | AT2G29350 | 61.660 | 253 | 96 | 1 | 16 | 268 | 12 | 263 | 2.67e-113 | 327 |
MS.gene63300.t1 | AT2G29340 | 57.308 | 260 | 109 | 1 | 15 | 272 | 3 | 262 | 1.03e-111 | 323 |
MS.gene63300.t1 | AT2G29340 | 57.752 | 258 | 107 | 1 | 15 | 270 | 3 | 260 | 6.04e-111 | 323 |
MS.gene63300.t1 | AT2G29370 | 58.846 | 260 | 107 | 0 | 9 | 268 | 6 | 265 | 1.50e-110 | 320 |
MS.gene63300.t1 | AT2G29330 | 58.915 | 258 | 104 | 1 | 15 | 270 | 3 | 260 | 1.56e-110 | 320 |
MS.gene63300.t1 | AT2G29300 | 58.301 | 259 | 105 | 2 | 15 | 270 | 3 | 261 | 3.38e-109 | 317 |
MS.gene63300.t1 | AT2G29310 | 57.752 | 258 | 107 | 1 | 15 | 270 | 3 | 260 | 2.07e-108 | 315 |
MS.gene63300.t1 | AT2G30670 | 59.055 | 254 | 104 | 0 | 15 | 268 | 3 | 256 | 7.37e-108 | 313 |
MS.gene63300.t1 | AT2G29320 | 58.555 | 263 | 94 | 4 | 17 | 270 | 11 | 267 | 1.02e-107 | 313 |
MS.gene63300.t1 | AT2G29290 | 60.924 | 238 | 91 | 1 | 35 | 270 | 6 | 243 | 4.89e-106 | 308 |
MS.gene63300.t1 | AT2G29300 | 57.708 | 253 | 106 | 1 | 15 | 266 | 3 | 255 | 1.82e-105 | 308 |
MS.gene63300.t1 | AT2G29350 | 60.889 | 225 | 87 | 1 | 44 | 268 | 2 | 225 | 7.89e-98 | 286 |
MS.gene63300.t1 | AT2G29320 | 57.143 | 245 | 90 | 4 | 35 | 270 | 11 | 249 | 1.33e-96 | 284 |
MS.gene63300.t1 | AT2G29310 | 56.303 | 238 | 102 | 1 | 35 | 270 | 21 | 258 | 3.18e-95 | 281 |
MS.gene63300.t1 | AT2G29350 | 63.731 | 193 | 70 | 0 | 16 | 208 | 12 | 204 | 1.67e-88 | 263 |
MS.gene63300.t1 | AT2G29340 | 56.701 | 194 | 84 | 0 | 15 | 208 | 3 | 196 | 3.03e-81 | 243 |
MS.gene63300.t1 | AT2G29340 | 56.701 | 194 | 84 | 0 | 15 | 208 | 3 | 196 | 3.03e-81 | 243 |
MS.gene63300.t1 | AT2G29310 | 58.247 | 194 | 81 | 0 | 15 | 208 | 3 | 196 | 4.02e-80 | 240 |
MS.gene63300.t1 | AT2G29320 | 58.115 | 191 | 79 | 1 | 17 | 206 | 11 | 201 | 3.41e-78 | 236 |
MS.gene63300.t1 | AT1G07440 | 60.494 | 162 | 64 | 0 | 15 | 176 | 8 | 169 | 1.97e-71 | 217 |
MS.gene63300.t1 | AT2G29310 | 56.322 | 174 | 76 | 0 | 35 | 208 | 21 | 194 | 5.78e-67 | 207 |
MS.gene63300.t1 | AT2G29170 | 64.444 | 90 | 32 | 0 | 16 | 105 | 13 | 102 | 1.06e-38 | 131 |
MS.gene63300.t1 | AT5G18210 | 33.721 | 258 | 154 | 8 | 18 | 263 | 7 | 259 | 4.18e-31 | 116 |
MS.gene63300.t1 | AT3G03980 | 32.472 | 271 | 162 | 8 | 8 | 262 | 3 | 268 | 2.15e-30 | 115 |
MS.gene63300.t1 | AT4G05530 | 32.520 | 246 | 161 | 5 | 19 | 263 | 9 | 250 | 3.80e-30 | 114 |
MS.gene63300.t1 | AT4G13180 | 32.707 | 266 | 165 | 7 | 9 | 265 | 3 | 263 | 2.34e-29 | 112 |
MS.gene63300.t1 | AT1G24360 | 29.851 | 268 | 177 | 5 | 3 | 265 | 58 | 319 | 1.54e-27 | 108 |
MS.gene63300.t1 | AT5G18210 | 33.750 | 240 | 142 | 8 | 18 | 245 | 7 | 241 | 8.12e-27 | 105 |
MS.gene63300.t1 | AT1G63380 | 29.344 | 259 | 171 | 8 | 19 | 267 | 19 | 275 | 1.88e-23 | 97.1 |
MS.gene63300.t1 | AT1G63380 | 29.344 | 259 | 171 | 8 | 19 | 267 | 17 | 273 | 2.16e-23 | 96.7 |
MS.gene63300.t1 | AT1G63380 | 29.344 | 259 | 171 | 8 | 19 | 267 | 15 | 271 | 2.22e-23 | 96.7 |
MS.gene63300.t1 | AT3G04000 | 31.008 | 258 | 162 | 8 | 19 | 262 | 14 | 269 | 2.64e-23 | 96.3 |
MS.gene63300.t1 | AT1G63380 | 29.344 | 259 | 171 | 8 | 19 | 267 | 22 | 278 | 3.13e-23 | 96.7 |
MS.gene63300.t1 | AT3G46170 | 28.016 | 257 | 176 | 6 | 19 | 267 | 26 | 281 | 1.88e-22 | 94.4 |
MS.gene63300.t1 | AT1G54870 | 30.859 | 256 | 164 | 7 | 19 | 265 | 82 | 333 | 2.77e-22 | 94.7 |
MS.gene63300.t1 | AT1G54870 | 30.859 | 256 | 164 | 7 | 19 | 265 | 84 | 335 | 3.27e-22 | 94.7 |
MS.gene63300.t1 | AT1G62610 | 27.132 | 258 | 178 | 7 | 19 | 267 | 13 | 269 | 3.32e-22 | 93.6 |
MS.gene63300.t1 | AT1G62610 | 27.132 | 258 | 178 | 7 | 19 | 267 | 15 | 271 | 3.43e-22 | 93.6 |
MS.gene63300.t1 | AT1G62610 | 27.132 | 258 | 178 | 7 | 19 | 267 | 14 | 270 | 3.82e-22 | 93.2 |
MS.gene63300.t1 | AT1G62610 | 27.132 | 258 | 178 | 7 | 19 | 267 | 19 | 275 | 3.86e-22 | 93.6 |
MS.gene63300.t1 | AT3G55310 | 28.682 | 258 | 173 | 8 | 19 | 267 | 17 | 272 | 6.99e-22 | 92.8 |
MS.gene63300.t1 | AT3G55290 | 28.736 | 261 | 169 | 9 | 19 | 267 | 18 | 273 | 1.14e-21 | 92.0 |
MS.gene63300.t1 | AT3G55290 | 28.736 | 261 | 169 | 9 | 19 | 267 | 17 | 272 | 1.15e-21 | 92.0 |
MS.gene63300.t1 | AT3G51680 | 28.571 | 266 | 168 | 7 | 19 | 264 | 32 | 295 | 3.18e-21 | 91.3 |
MS.gene63300.t1 | AT3G05260 | 29.020 | 255 | 169 | 6 | 19 | 265 | 37 | 287 | 1.81e-20 | 89.0 |
MS.gene63300.t1 | AT2G17845 | 26.515 | 264 | 176 | 9 | 19 | 268 | 47 | 306 | 2.02e-19 | 86.7 |
MS.gene63300.t1 | AT3G26760 | 27.099 | 262 | 172 | 6 | 19 | 266 | 36 | 292 | 2.61e-19 | 85.9 |
MS.gene63300.t1 | AT3G12800 | 26.482 | 253 | 174 | 6 | 21 | 263 | 12 | 262 | 3.99e-19 | 85.5 |
MS.gene63300.t1 | AT1G52340 | 30.534 | 262 | 162 | 9 | 19 | 264 | 18 | 275 | 5.46e-17 | 79.3 |
MS.gene63300.t1 | AT4G03140 | 26.172 | 256 | 175 | 7 | 19 | 264 | 78 | 329 | 9.43e-17 | 79.3 |
MS.gene63300.t1 | AT3G26770 | 27.692 | 260 | 171 | 6 | 19 | 266 | 41 | 295 | 6.40e-16 | 76.6 |
MS.gene63300.t1 | AT2G47120 | 26.255 | 259 | 177 | 9 | 19 | 271 | 6 | 256 | 1.35e-15 | 75.1 |
MS.gene63300.t1 | AT2G47120 | 26.255 | 259 | 177 | 9 | 19 | 271 | 7 | 257 | 1.36e-15 | 75.1 |
MS.gene63300.t1 | AT3G42960 | 27.969 | 261 | 156 | 8 | 24 | 264 | 13 | 261 | 8.02e-15 | 73.2 |
MS.gene63300.t1 | AT2G47130 | 26.587 | 252 | 176 | 7 | 19 | 265 | 6 | 253 | 1.27e-14 | 72.4 |
MS.gene63300.t1 | AT3G06060 | 28.125 | 192 | 129 | 3 | 24 | 211 | 42 | 228 | 7.03e-14 | 70.9 |
MS.gene63300.t1 | AT3G06060 | 28.125 | 192 | 129 | 3 | 24 | 211 | 59 | 245 | 8.04e-14 | 70.9 |
MS.gene63300.t1 | AT5G04900 | 28.780 | 205 | 136 | 7 | 2 | 200 | 61 | 261 | 3.99e-13 | 68.9 |
MS.gene63300.t1 | AT3G47350 | 28.037 | 214 | 143 | 6 | 18 | 226 | 43 | 250 | 7.55e-13 | 67.8 |
MS.gene63300.t1 | AT3G47350 | 28.037 | 214 | 143 | 6 | 18 | 226 | 43 | 250 | 1.20e-12 | 67.4 |
MS.gene63300.t1 | AT5G19200 | 26.471 | 204 | 141 | 3 | 25 | 224 | 41 | 239 | 3.78e-12 | 65.9 |
MS.gene63300.t1 | AT3G03330 | 26.131 | 199 | 138 | 4 | 10 | 201 | 32 | 228 | 8.31e-12 | 65.1 |
MS.gene63300.t1 | AT1G24470 | 27.228 | 202 | 136 | 6 | 15 | 209 | 46 | 243 | 1.56e-11 | 63.9 |
MS.gene63300.t1 | AT1G49670 | 29.126 | 206 | 129 | 8 | 21 | 212 | 6 | 208 | 2.70e-11 | 63.9 |
MS.gene63300.t1 | AT1G49670 | 29.126 | 206 | 129 | 8 | 21 | 212 | 6 | 208 | 3.20e-11 | 63.9 |
MS.gene63300.t1 | AT5G10050 | 29.508 | 183 | 122 | 4 | 25 | 206 | 11 | 187 | 6.95e-11 | 62.0 |
Find 60 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCGGTGGCACTCGTGGAAT+CGG | 0.347184 | 3.3:+60405689 | MS.gene63300:CDS |
TGGAAGCCACTTGTTGAATA+AGG | 0.356666 | 3.3:-60406202 | None:intergenic |
TATCCTCTTCTAAAAGAATC+TGG | 0.356990 | 3.3:+60407157 | MS.gene63300:CDS |
ATGTTCTACAAGTGGGGTTC+TGG | 0.364231 | 3.3:-60407446 | None:intergenic |
ACCCGAAGAGGTCTCCTCTT+TGG | 0.381912 | 3.3:+60408083 | MS.gene63300:CDS |
GTGTTCATTTCATCTGTTGC+AGG | 0.395569 | 3.3:+60407193 | MS.gene63300:CDS |
GGACAAGTTATTTGTGTTGA+TGG | 0.402356 | 3.3:+60408144 | MS.gene63300:CDS |
ATCTCATGTAATTCTCATGC+TGG | 0.418009 | 3.3:-60408193 | None:intergenic |
CTTCTAAAAGAATCTGGAAA+TGG | 0.429287 | 3.3:+60407163 | MS.gene63300:CDS |
GTTGCAGGTGTGGTTAGCTT+AGG | 0.435339 | 3.3:+60407208 | MS.gene63300:CDS |
CACCAAAGAGGAGACCTCTT+CGG | 0.436189 | 3.3:-60408085 | None:intergenic |
TCAATAAGTGCTTACAAGAA+TGG | 0.438266 | 3.3:+60406114 | MS.gene63300:CDS |
GATATGCAAGTTGGCACAAA+TGG | 0.442938 | 3.3:-60407138 | None:intergenic |
CAAGTGGCTTCCACTTTCAA+TGG | 0.445054 | 3.3:+60406212 | MS.gene63300:CDS |
GGTTCGGCAATGCGCTTAAG+AGG | 0.448812 | 3.3:-60408063 | None:intergenic |
TGAATAAGGCTCTCTCTTTG+TGG | 0.452558 | 3.3:-60406188 | None:intergenic |
AGAGGAGACCTCTTCGGGTT+CGG | 0.459507 | 3.3:-60408079 | None:intergenic |
GTGAATGATCTAGTTGCATT+TGG | 0.466081 | 3.3:+60406053 | MS.gene63300:CDS |
GGAATGACAGCTCTTGTAAC+CGG | 0.471184 | 3.3:+60405671 | MS.gene63300:CDS |
TGCAACTAGATCATTCACTA+TGG | 0.473158 | 3.3:-60406048 | None:intergenic |
ACCAAAGAGGAGACCTCTTC+GGG | 0.477426 | 3.3:-60408084 | None:intergenic |
TCAGCAGTGTACTCAATGGT+TGG | 0.489827 | 3.3:-60407073 | None:intergenic |
ATTTCAAAATCAAAAGTTTG+TGG | 0.490723 | 3.3:+60408020 | MS.gene63300:CDS |
GTTGTCTATTGCCCATTCAC+AGG | 0.493489 | 3.3:-60407392 | None:intergenic |
CTACTGTACACACTTGTTCA+AGG | 0.495979 | 3.3:+60406078 | MS.gene63300:CDS |
AATGGGCAATAGACAACATA+AGG | 0.496335 | 3.3:+60407398 | MS.gene63300:CDS |
GGTGTGGTTAGCTTAGGTAC+TGG | 0.499150 | 3.3:+60407214 | MS.gene63300:CDS |
TTCTTCAGCAGTGTACTCAA+TGG | 0.499815 | 3.3:-60407077 | None:intergenic |
GACAAGTTATTTGTGTTGAT+GGG | 0.502183 | 3.3:+60408145 | MS.gene63300:CDS |
CCGGTGGCACTCGTGGAATC+GGG | 0.504977 | 3.3:+60405690 | MS.gene63300:CDS |
GTTGAGCTTGCCATTGAAAG+TGG | 0.515168 | 3.3:-60406222 | None:intergenic |
CATTTCATCTGTTGCAGGTG+TGG | 0.515366 | 3.3:+60407198 | MS.gene63300:CDS |
CTTGTAACCGGTGGCACTCG+TGG | 0.521899 | 3.3:+60405683 | MS.gene63300:CDS |
CCCGATTCCACGAGTGCCAC+CGG | 0.529955 | 3.3:-60405690 | None:intergenic |
GGACAGAGATGGTCTCTCAC+TGG | 0.538298 | 3.3:+60405650 | MS.gene63300:CDS |
TCTGTCTACGCAGCAAGTAA+AGG | 0.541483 | 3.3:+60407238 | MS.gene63300:CDS |
CCTGCTGCATCTTACATCAC+TGG | 0.543937 | 3.3:+60408123 | MS.gene63300:CDS |
AAATTACATGTTCTACAAGT+GGG | 0.546415 | 3.3:-60407453 | None:intergenic |
TTAGAAGAGGATATGCAAGT+TGG | 0.555015 | 3.3:-60407147 | None:intergenic |
TTACAAGAATGGCAAAGTAA+AGG | 0.555353 | 3.3:+60406125 | MS.gene63300:CDS |
AGTGGGGTTCTGGTTGCCCA+TGG | 0.559899 | 3.3:-60407436 | None:intergenic |
GAGCAATTGTGTTGTACCAT+GGG | 0.560513 | 3.3:+60407420 | MS.gene63300:CDS |
GAAACACATAGCAGCAGAGG+TGG | 0.561832 | 3.3:+60405629 | MS.gene63300:CDS |
AGAGAGCCTTATTCAACAAG+TGG | 0.562362 | 3.3:+60406196 | MS.gene63300:CDS |
AAAATTACATGTTCTACAAG+TGG | 0.573526 | 3.3:-60407454 | None:intergenic |
TCTCATGTAATTCTCATGCT+GGG | 0.575912 | 3.3:-60408192 | None:intergenic |
GGAGCAATTGTGTTGTACCA+TGG | 0.576420 | 3.3:+60407419 | MS.gene63300:CDS |
GCGCATTGCCGAACCCGAAG+AGG | 0.578494 | 3.3:+60408071 | MS.gene63300:CDS |
GCAGCAGAGGTGGACAGAGA+TGG | 0.586161 | 3.3:+60405639 | MS.gene63300:CDS |
GTAGAAACACATAGCAGCAG+AGG | 0.588040 | 3.3:+60405626 | MS.gene63300:CDS |
CGGTCTGTGATGTAAGCTCT+CGG | 0.593629 | 3.3:+60406165 | MS.gene63300:CDS |
CAAGTTATTTGTGTTGATGG+GGG | 0.602087 | 3.3:+60408147 | MS.gene63300:CDS |
ATGCTTTAGGTAAATAACGT+GGG | 0.610168 | 3.3:+60407034 | MS.gene63300:intron |
CCAGTGATGTAAGATGCAGC+AGG | 0.631919 | 3.3:-60408123 | None:intergenic |
ACAAGTTATTTGTGTTGATG+GGG | 0.632558 | 3.3:+60408146 | MS.gene63300:CDS |
AAGATGCAGCAGGTAAGCAA+AGG | 0.634488 | 3.3:-60408113 | None:intergenic |
TATGCTTTAGGTAAATAACG+TGG | 0.635045 | 3.3:+60407033 | MS.gene63300:intron |
AATTACATGTTCTACAAGTG+GGG | 0.636533 | 3.3:-60407452 | None:intergenic |
GCAAAGGAAAGTCACCAAAG+AGG | 0.638884 | 3.3:-60408097 | None:intergenic |
ATGACAGCTCTTGTAACCGG+TGG | 0.671270 | 3.3:+60405674 | MS.gene63300:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAAGTAAGTT+AGG | - | chr3.3:60407487-60407506 | None:intergenic | 10.0% |
!! | AAAAAAAAAAAAGTAAGTTA+GGG | - | chr3.3:60407486-60407505 | None:intergenic | 10.0% |
!! | TAAAATAGTAATTATTTGTA+AGG | - | chr3.3:60406687-60406706 | None:intergenic | 10.0% |
!! | TTATTAATGATTTATATGTT+TGG | - | chr3.3:60406270-60406289 | None:intergenic | 10.0% |
!! | ACTCTTTATAATTAAGTTAA+TGG | - | chr3.3:60406432-60406451 | None:intergenic | 15.0% |
!! | TAGATAATACTATAAAATGT+TGG | - | chr3.3:60405945-60405964 | None:intergenic | 15.0% |
!! | TATTATGTATCCATATTTAT+TGG | - | chr3.3:60407552-60407571 | None:intergenic | 15.0% |
!!! | CTTACTTTTTTTTTTTTTGA+AGG | + | chr3.3:60407489-60407508 | MS.gene63300:intron | 15.0% |
!!! | TATTTACATTTTTTCATTCA+TGG | + | chr3.3:60407859-60407878 | MS.gene63300:intron | 15.0% |
!! | AAAATACACATAAAACTCAA+AGG | - | chr3.3:60407628-60407647 | None:intergenic | 20.0% |
!! | AAATAATGAAATAAGAGAGA+AGG | - | chr3.3:60405729-60405748 | None:intergenic | 20.0% |
!! | AATAATGAAATAAGAGAGAA+GGG | - | chr3.3:60405728-60405747 | None:intergenic | 20.0% |
!! | ATTTCAAAATCAAAAGTTTG+TGG | + | chr3.3:60408020-60408039 | MS.gene63300:CDS | 20.0% |
!! | CAAAATAAAATAATGATGCA+GGG | - | chr3.3:60405767-60405786 | None:intergenic | 20.0% |
!! | TAATCAGCTTACAAAAAATT+TGG | + | chr3.3:60407369-60407388 | MS.gene63300:CDS | 20.0% |
!! | TCAAAATAAAATAATGATGC+AGG | - | chr3.3:60405768-60405787 | None:intergenic | 20.0% |
!!! | AAAAGATAAGGAAGTATTTT+TGG | - | chr3.3:60405796-60405815 | None:intergenic | 20.0% |
!!! | TTGGATAATTTTGAAGATAA+AGG | - | chr3.3:60406609-60406628 | None:intergenic | 20.0% |
!!! | TTTTTTGTTCAAACTAACAA+TGG | + | chr3.3:60407945-60407964 | MS.gene63300:intron | 20.0% |
! | AAAATTACATGTTCTACAAG+TGG | - | chr3.3:60407457-60407476 | None:intergenic | 25.0% |
! | AAATTACATGTTCTACAAGT+GGG | - | chr3.3:60407456-60407475 | None:intergenic | 25.0% |
! | ACCTTAAGAGAGTTTATAAA+CGG | + | chr3.3:60406577-60406596 | MS.gene63300:intron | 25.0% |
! | ATAATGAAATAAGAGAGAAG+GGG | - | chr3.3:60405727-60405746 | None:intergenic | 25.0% |
! | ATTATAAAGAGTGATGACAA+TGG | + | chr3.3:60406440-60406459 | MS.gene63300:intron | 25.0% |
! | CTTAAGCAGATTACATAAAA+AGG | - | chr3.3:60406735-60406754 | None:intergenic | 25.0% |
! | TCTGCTTATGATTGATTATA+TGG | + | chr3.3:60407771-60407790 | MS.gene63300:intron | 25.0% |
! | TTATAAAGAGTGATGACAAT+GGG | + | chr3.3:60406441-60406460 | MS.gene63300:intron | 25.0% |
! | TTGAAGGAAACTTACTTATT+TGG | + | chr3.3:60407505-60407524 | MS.gene63300:intron | 25.0% |
! | TTTGCATGAATTTATGCTTT+AGG | + | chr3.3:60407021-60407040 | MS.gene63300:intron | 25.0% |
!! | ACTAGACATATCAAAAGTTT+TGG | - | chr3.3:60406881-60406900 | None:intergenic | 25.0% |
!!! | CATATTTATTGGTTCTATGT+GGG | - | chr3.3:60407541-60407560 | None:intergenic | 25.0% |
!!! | CGTTTAAATGTTTTTACACA+CGG | + | chr3.3:60405841-60405860 | MS.gene63300:intron | 25.0% |
AAAAAATTTGGCCTGTGAAT+GGG | + | chr3.3:60407381-60407400 | MS.gene63300:CDS | 30.0% | |
AAACGACGCTAATCTTAAAA+CGG | - | chr3.3:60405826-60405845 | None:intergenic | 30.0% | |
AATTACATGTTCTACAAGTG+GGG | - | chr3.3:60407455-60407474 | None:intergenic | 30.0% | |
AATTGCAGCTGAAAATTCAA+TGG | - | chr3.3:60407350-60407369 | None:intergenic | 30.0% | |
ACCAACACTACAACATAATT+GGG | + | chr3.3:60405864-60405883 | MS.gene63300:intron | 30.0% | |
ACCGTTTATAAACTCTCTTA+AGG | - | chr3.3:60406581-60406600 | None:intergenic | 30.0% | |
ATTCATTTGACACATTCTCT+AGG | + | chr3.3:60406021-60406040 | MS.gene63300:intron | 30.0% | |
CAACAAAAATCAGGAAGAAA+CGG | - | chr3.3:60406816-60406835 | None:intergenic | 30.0% | |
CCACATAGAACCAATAAATA+TGG | + | chr3.3:60407539-60407558 | MS.gene63300:intron | 30.0% | |
CTATTGGACTAAGTTTGAAT+TGG | + | chr3.3:60406337-60406356 | MS.gene63300:intron | 30.0% | |
TAGAGAATGTGTCAAATGAA+TGG | - | chr3.3:60406022-60406041 | None:intergenic | 30.0% | |
TCAATAAGTGCTTACAAGAA+TGG | + | chr3.3:60406114-60406133 | MS.gene63300:CDS | 30.0% | |
TTACAAGAATGGCAAAGTAA+AGG | + | chr3.3:60406125-60406144 | MS.gene63300:CDS | 30.0% | |
TTCAGGAATCAACAAAAATC+AGG | - | chr3.3:60406825-60406844 | None:intergenic | 30.0% | |
! | ACAAGTTATTTGTGTTGATG+GGG | + | chr3.3:60408146-60408165 | MS.gene63300:CDS | 30.0% |
! | ATGCTTTAGGTAAATAACGT+GGG | + | chr3.3:60407034-60407053 | MS.gene63300:intron | 30.0% |
! | ATGGCAAAGTAAAGGATTTT+CGG | + | chr3.3:60406133-60406152 | MS.gene63300:CDS | 30.0% |
! | ATTCCTATCTTCAAGTTCAA+TGG | + | chr3.3:60407894-60407913 | MS.gene63300:intron | 30.0% |
! | ATTGTTGACTGTTCTATTCA+TGG | + | chr3.3:60406300-60406319 | MS.gene63300:intron | 30.0% |
! | CTTCTAAAAGAATCTGGAAA+TGG | + | chr3.3:60407163-60407182 | MS.gene63300:CDS | 30.0% |
! | GACAAGTTATTTGTGTTGAT+GGG | + | chr3.3:60408145-60408164 | MS.gene63300:CDS | 30.0% |
! | GTAAGTACATTGTTTAGAGT+CGG | + | chr3.3:60406899-60406918 | MS.gene63300:intron | 30.0% |
! | TATCCTCTTCTAAAAGAATC+TGG | + | chr3.3:60407157-60407176 | MS.gene63300:CDS | 30.0% |
! | TATGCTTTAGGTAAATAACG+TGG | + | chr3.3:60407033-60407052 | MS.gene63300:intron | 30.0% |
! | TTGATCAATGTTTAGAGTTG+AGG | + | chr3.3:60406779-60406798 | MS.gene63300:intron | 30.0% |
!! | CAAGTTTGTTATGGACTTAT+GGG | - | chr3.3:60406508-60406527 | None:intergenic | 30.0% |
!! | CATAGGTTTGTTGATAGTAA+AGG | + | chr3.3:60406360-60406379 | MS.gene63300:intron | 30.0% |
!! | CCATATTTATTGGTTCTATG+TGG | - | chr3.3:60407542-60407561 | None:intergenic | 30.0% |
!! | TCAAGTTTGTTATGGACTTA+TGG | - | chr3.3:60406509-60406528 | None:intergenic | 30.0% |
!! | TCACTATTTGACTTGATGTT+TGG | - | chr3.3:60406628-60406647 | None:intergenic | 30.0% |
!! | TTTCCAGATTCTTTTAGAAG+AGG | - | chr3.3:60407163-60407182 | None:intergenic | 30.0% |
!!! | GGTGTTATCTTTTTTCAATG+TGG | - | chr3.3:60406560-60406579 | None:intergenic | 30.0% |
AATGGGCAATAGACAACATA+AGG | + | chr3.3:60407398-60407417 | MS.gene63300:CDS | 35.0% | |
CAAAAAATTTGGCCTGTGAA+TGG | + | chr3.3:60407380-60407399 | MS.gene63300:CDS | 35.0% | |
GAATGTGTCAAATGAATGGA+TGG | - | chr3.3:60406018-60406037 | None:intergenic | 35.0% | |
GACCAACACTACAACATAAT+TGG | + | chr3.3:60405863-60405882 | MS.gene63300:intron | 35.0% | |
GACTAAGTTTGAATTGGCAT+AGG | + | chr3.3:60406343-60406362 | MS.gene63300:intron | 35.0% | |
GGACAAGTTATTTGTGTTGA+TGG | + | chr3.3:60408144-60408163 | MS.gene63300:CDS | 35.0% | |
GGATCTATGCAGAAAACTAT+TGG | + | chr3.3:60406321-60406340 | MS.gene63300:intron | 35.0% | |
GTGAATGATCTAGTTGCATT+TGG | + | chr3.3:60406053-60406072 | MS.gene63300:CDS | 35.0% | |
TAGATCCAAATGATGAGTTC+AGG | - | chr3.3:60406842-60406861 | None:intergenic | 35.0% | |
TCATAAGCAGACATTACAGA+TGG | - | chr3.3:60407762-60407781 | None:intergenic | 35.0% | |
TCCCAATTATGTTGTAGTGT+TGG | - | chr3.3:60405868-60405887 | None:intergenic | 35.0% | |
TGATTCCTGAACTCATCATT+TGG | + | chr3.3:60406834-60406853 | MS.gene63300:intron | 35.0% | |
TGCAACTAGATCATTCACTA+TGG | - | chr3.3:60406051-60406070 | None:intergenic | 35.0% | |
TGTCCATTGAACTTGAAGAT+AGG | - | chr3.3:60407900-60407919 | None:intergenic | 35.0% | |
TTAGAAGAGGATATGCAAGT+TGG | - | chr3.3:60407150-60407169 | None:intergenic | 35.0% | |
! | AGTAAAGGATTTTCGGTTAC+TGG | + | chr3.3:60406140-60406159 | MS.gene63300:CDS | 35.0% |
! | CAAACTTGAGTTGTTGCTAT+TGG | + | chr3.3:60406520-60406539 | MS.gene63300:intron | 35.0% |
! | CAAGTTATTTGTGTTGATGG+GGG | + | chr3.3:60408147-60408166 | MS.gene63300:CDS | 35.0% |
!! | GCAACAACTCAAGTTTGTTA+TGG | - | chr3.3:60406517-60406536 | None:intergenic | 35.0% |
!! | TGGACTAGCAGTAAATTGTT+AGG | + | chr3.3:60407791-60407810 | MS.gene63300:intron | 35.0% |
AACGGAGGGAGTAAAAGATA+AGG | - | chr3.3:60405808-60405827 | None:intergenic | 40.0% | |
AGTCGGATGTCATTCAACAA+TGG | + | chr3.3:60406916-60406935 | MS.gene63300:intron | 40.0% | |
CTACTGTACACACTTGTTCA+AGG | + | chr3.3:60406078-60406097 | MS.gene63300:CDS | 40.0% | |
GACGCTAATCTTAAAACGGA+GGG | - | chr3.3:60405822-60405841 | None:intergenic | 40.0% | |
GAGCAATTGTGTTGTACCAT+GGG | + | chr3.3:60407420-60407439 | MS.gene63300:CDS | 40.0% | |
GGTAGAGCTCTTTAGTAACA+CGG | - | chr3.3:60405924-60405943 | None:intergenic | 40.0% | |
GTCGGATGTCATTCAACAAT+GGG | + | chr3.3:60406917-60406936 | MS.gene63300:intron | 40.0% | |
GTGTTCATTTCATCTGTTGC+AGG | + | chr3.3:60407193-60407212 | MS.gene63300:CDS | 40.0% | |
TGAATAAGGCTCTCTCTTTG+TGG | - | chr3.3:60406191-60406210 | None:intergenic | 40.0% | |
TTCTTCAGCAGTGTACTCAA+TGG | - | chr3.3:60407080-60407099 | None:intergenic | 40.0% | |
! | AGGATTTTCGGTTACTGGAT+CGG | + | chr3.3:60406145-60406164 | MS.gene63300:CDS | 40.0% |
! | GATATGCAAGTTGGCACAAA+TGG | - | chr3.3:60407141-60407160 | None:intergenic | 40.0% |
! | TGGAAGCCACTTGTTGAATA+AGG | - | chr3.3:60406205-60406224 | None:intergenic | 40.0% |
!! | AGAGAGCCTTATTCAACAAG+TGG | + | chr3.3:60406196-60406215 | MS.gene63300:CDS | 40.0% |
AAGATGCAGCAGGTAAGCAA+AGG | - | chr3.3:60408116-60408135 | None:intergenic | 45.0% | |
ATGTTCTACAAGTGGGGTTC+TGG | - | chr3.3:60407449-60407468 | None:intergenic | 45.0% | |
CAAGTGGCTTCCACTTTCAA+TGG | + | chr3.3:60406212-60406231 | MS.gene63300:CDS | 45.0% | |
CATTTCATCTGTTGCAGGTG+TGG | + | chr3.3:60407198-60407217 | MS.gene63300:CDS | 45.0% | |
CGACGCTAATCTTAAAACGG+AGG | - | chr3.3:60405823-60405842 | None:intergenic | 45.0% | |
GAGTGATGACAATGGGAAAG+TGG | + | chr3.3:60406448-60406467 | MS.gene63300:intron | 45.0% | |
GATGGGGGATTAACTGTGTT+TGG | + | chr3.3:60408162-60408181 | MS.gene63300:CDS | 45.0% | |
GCAAAGGAAAGTCACCAAAG+AGG | - | chr3.3:60408100-60408119 | None:intergenic | 45.0% | |
GGAATGACAGCTCTTGTAAC+CGG | + | chr3.3:60405671-60405690 | MS.gene63300:CDS | 45.0% | |
GGAGCAATTGTGTTGTACCA+TGG | + | chr3.3:60407419-60407438 | MS.gene63300:CDS | 45.0% | |
GTAGAAACACATAGCAGCAG+AGG | + | chr3.3:60405626-60405645 | MS.gene63300:CDS | 45.0% | |
GTTGAGCTTGCCATTGAAAG+TGG | - | chr3.3:60406225-60406244 | None:intergenic | 45.0% | |
GTTGTCTATTGCCCATTCAC+AGG | - | chr3.3:60407395-60407414 | None:intergenic | 45.0% | |
TCAGCAGTGTACTCAATGGT+TGG | - | chr3.3:60407076-60407095 | None:intergenic | 45.0% | |
TCTGTCTACGCAGCAAGTAA+AGG | + | chr3.3:60407238-60407257 | MS.gene63300:CDS | 45.0% | |
!! | CAAAAATTAAAAAAAAATAT+TGG | - | chr3.3:60407995-60408014 | None:intergenic | 5.0% |
ACCAAAGAGGAGACCTCTTC+GGG | - | chr3.3:60408087-60408106 | None:intergenic | 50.0% | |
ATGACAGCTCTTGTAACCGG+TGG | + | chr3.3:60405674-60405693 | MS.gene63300:CDS | 50.0% | |
CACCAAAGAGGAGACCTCTT+CGG | - | chr3.3:60408088-60408107 | None:intergenic | 50.0% | |
CCAGTGATGTAAGATGCAGC+AGG | - | chr3.3:60408126-60408145 | None:intergenic | 50.0% | |
CCTGCTGCATCTTACATCAC+TGG | + | chr3.3:60408123-60408142 | MS.gene63300:CDS | 50.0% | |
CGGTCTGTGATGTAAGCTCT+CGG | + | chr3.3:60406165-60406184 | MS.gene63300:CDS | 50.0% | |
GAAACACATAGCAGCAGAGG+TGG | + | chr3.3:60405629-60405648 | MS.gene63300:CDS | 50.0% | |
!! | GGTGTGGTTAGCTTAGGTAC+TGG | + | chr3.3:60407214-60407233 | MS.gene63300:CDS | 50.0% |
!! | GTTGCAGGTGTGGTTAGCTT+AGG | + | chr3.3:60407208-60407227 | MS.gene63300:CDS | 50.0% |
ACCCGAAGAGGTCTCCTCTT+TGG | + | chr3.3:60408083-60408102 | MS.gene63300:CDS | 55.0% | |
GGACAGAGATGGTCTCTCAC+TGG | + | chr3.3:60405650-60405669 | MS.gene63300:CDS | 55.0% | |
GGTTCGGCAATGCGCTTAAG+AGG | - | chr3.3:60408066-60408085 | None:intergenic | 55.0% | |
! | AGAGGAGACCTCTTCGGGTT+CGG | - | chr3.3:60408082-60408101 | None:intergenic | 55.0% |
ACCGGTGGCACTCGTGGAAT+CGG | + | chr3.3:60405689-60405708 | MS.gene63300:CDS | 60.0% | |
CTTGTAACCGGTGGCACTCG+TGG | + | chr3.3:60405683-60405702 | MS.gene63300:CDS | 60.0% | |
GCAGCAGAGGTGGACAGAGA+TGG | + | chr3.3:60405639-60405658 | MS.gene63300:CDS | 60.0% | |
! | AGTGGGGTTCTGGTTGCCCA+TGG | - | chr3.3:60407439-60407458 | None:intergenic | 60.0% |
CCCGATTCCACGAGTGCCAC+CGG | - | chr3.3:60405693-60405712 | None:intergenic | 65.0% | |
CCGGTGGCACTCGTGGAATC+GGG | + | chr3.3:60405690-60405709 | MS.gene63300:CDS | 65.0% | |
GCGCATTGCCGAACCCGAAG+AGG | + | chr3.3:60408071-60408090 | MS.gene63300:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 60405611 | 60408212 | 60405611 | ID=MS.gene63300 |
chr3.3 | mRNA | 60405611 | 60408212 | 60405611 | ID=MS.gene63300.t1;Parent=MS.gene63300 |
chr3.3 | exon | 60405611 | 60405711 | 60405611 | ID=MS.gene63300.t1.exon1;Parent=MS.gene63300.t1 |
chr3.3 | CDS | 60405611 | 60405711 | 60405611 | ID=cds.MS.gene63300.t1;Parent=MS.gene63300.t1 |
chr3.3 | exon | 60406043 | 60406250 | 60406043 | ID=MS.gene63300.t1.exon2;Parent=MS.gene63300.t1 |
chr3.3 | CDS | 60406043 | 60406250 | 60406043 | ID=cds.MS.gene63300.t1;Parent=MS.gene63300.t1 |
chr3.3 | exon | 60407043 | 60407259 | 60407043 | ID=MS.gene63300.t1.exon3;Parent=MS.gene63300.t1 |
chr3.3 | CDS | 60407043 | 60407259 | 60407043 | ID=cds.MS.gene63300.t1;Parent=MS.gene63300.t1 |
chr3.3 | exon | 60407362 | 60407468 | 60407362 | ID=MS.gene63300.t1.exon4;Parent=MS.gene63300.t1 |
chr3.3 | CDS | 60407362 | 60407468 | 60407362 | ID=cds.MS.gene63300.t1;Parent=MS.gene63300.t1 |
chr3.3 | exon | 60408018 | 60408212 | 60408018 | ID=MS.gene63300.t1.exon5;Parent=MS.gene63300.t1 |
chr3.3 | CDS | 60408018 | 60408212 | 60408018 | ID=cds.MS.gene63300.t1;Parent=MS.gene63300.t1 |
Gene Sequence |
Protein sequence |