Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63403.t1 | XP_013460705.1 | 95.9 | 271 | 11 | 0 | 1 | 271 | 1 | 271 | 9.50E-143 | 516.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63403.t1 | Q9LHT0 | 69.4 | 258 | 79 | 0 | 12 | 269 | 6 | 263 | 2.4e-102 | 373.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63403.t1 | A0A072UY55 | 95.9 | 271 | 11 | 0 | 1 | 271 | 1 | 271 | 6.9e-143 | 516.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049297 | MS.gene63403 | 0.811622 | 6.39E-51 | -1.69E-46 |
MS.gene050301 | MS.gene63403 | 0.811512 | 6.75E-51 | -1.69E-46 |
MS.gene050558 | MS.gene63403 | 0.835809 | 1.35E-56 | -1.69E-46 |
MS.gene051663 | MS.gene63403 | 0.809817 | 1.57E-50 | -1.69E-46 |
MS.gene051860 | MS.gene63403 | 0.807145 | 5.83E-50 | -1.69E-46 |
MS.gene053630 | MS.gene63403 | 0.808672 | 2.76E-50 | -1.69E-46 |
MS.gene053836 | MS.gene63403 | 0.84601 | 2.84E-59 | -1.69E-46 |
MS.gene055422 | MS.gene63403 | 0.804885 | 1.74E-49 | -1.69E-46 |
MS.gene057121 | MS.gene63403 | 0.856537 | 3.01E-62 | -1.69E-46 |
MS.gene057260 | MS.gene63403 | 0.815221 | 1.03E-51 | -1.69E-46 |
MS.gene057439 | MS.gene63403 | 0.807903 | 4.03E-50 | -1.69E-46 |
MS.gene058002 | MS.gene63403 | 0.839546 | 1.49E-57 | -1.69E-46 |
MS.gene058142 | MS.gene63403 | 0.812024 | 5.22E-51 | -1.69E-46 |
MS.gene058749 | MS.gene63403 | 0.824552 | 7.59E-54 | -1.69E-46 |
MS.gene058845 | MS.gene63403 | 0.809992 | 1.44E-50 | -1.69E-46 |
MS.gene061049 | MS.gene63403 | 0.811928 | 5.48E-51 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63403.t1 | MTR_3g068085 | 95.941 | 271 | 11 | 0 | 1 | 271 | 1 | 271 | 0.0 | 520 |
MS.gene63403.t1 | MTR_3g068070 | 88.258 | 264 | 31 | 0 | 1 | 264 | 1 | 264 | 9.76e-176 | 485 |
MS.gene63403.t1 | MTR_3g068065 | 85.156 | 256 | 38 | 0 | 15 | 270 | 17 | 272 | 2.85e-165 | 459 |
MS.gene63403.t1 | MTR_3g068155 | 76.692 | 266 | 62 | 0 | 6 | 271 | 10 | 275 | 2.50e-155 | 434 |
MS.gene63403.t1 | MTR_3g068175 | 73.626 | 273 | 70 | 1 | 1 | 271 | 1 | 273 | 2.57e-148 | 416 |
MS.gene63403.t1 | MTR_3g068175 | 72.563 | 277 | 70 | 2 | 1 | 271 | 1 | 277 | 3.71e-146 | 410 |
MS.gene63403.t1 | MTR_4g064883 | 61.719 | 256 | 98 | 0 | 12 | 267 | 11 | 266 | 1.66e-124 | 355 |
MS.gene63403.t1 | MTR_4g064887 | 60.305 | 262 | 104 | 0 | 1 | 262 | 1 | 262 | 1.81e-120 | 345 |
MS.gene63403.t1 | MTR_7g063320 | 60.311 | 257 | 98 | 1 | 9 | 261 | 9 | 265 | 1.86e-112 | 325 |
MS.gene63403.t1 | MTR_7g063270 | 60.853 | 258 | 98 | 1 | 6 | 260 | 7 | 264 | 2.46e-110 | 319 |
MS.gene63403.t1 | MTR_7g063390 | 59.615 | 260 | 101 | 2 | 6 | 261 | 7 | 266 | 6.89e-110 | 318 |
MS.gene63403.t1 | MTR_7g063360 | 60.385 | 260 | 99 | 2 | 6 | 261 | 7 | 266 | 9.70e-109 | 315 |
MS.gene63403.t1 | MTR_7g063330 | 57.795 | 263 | 108 | 1 | 1 | 260 | 1 | 263 | 3.55e-108 | 314 |
MS.gene63403.t1 | MTR_7g063260 | 58.687 | 259 | 103 | 1 | 6 | 260 | 7 | 265 | 1.07e-105 | 308 |
MS.gene63403.t1 | MTR_4g064887 | 60.766 | 209 | 82 | 0 | 1 | 209 | 1 | 209 | 9.35e-94 | 276 |
MS.gene63403.t1 | MTR_4g064883 | 62.626 | 198 | 74 | 0 | 12 | 209 | 11 | 208 | 8.13e-93 | 273 |
MS.gene63403.t1 | MTR_7g063270 | 50.775 | 258 | 75 | 3 | 6 | 260 | 7 | 215 | 6.60e-81 | 243 |
MS.gene63403.t1 | MTR_4g132850 | 32.114 | 246 | 162 | 4 | 15 | 259 | 7 | 248 | 8.02e-32 | 118 |
MS.gene63403.t1 | MTR_3g085740 | 30.081 | 246 | 161 | 5 | 21 | 261 | 81 | 320 | 1.60e-30 | 116 |
MS.gene63403.t1 | MTR_7g094510 | 32.283 | 254 | 148 | 10 | 20 | 259 | 11 | 254 | 2.08e-28 | 109 |
MS.gene63403.t1 | MTR_7g094520 | 33.068 | 251 | 150 | 9 | 20 | 259 | 16 | 259 | 2.89e-28 | 109 |
MS.gene63403.t1 | MTR_7g071680 | 31.915 | 282 | 154 | 8 | 8 | 260 | 22 | 294 | 9.39e-28 | 108 |
MS.gene63403.t1 | MTR_4g058810 | 30.651 | 261 | 168 | 9 | 14 | 264 | 10 | 267 | 2.35e-27 | 107 |
MS.gene63403.t1 | MTR_4g058840 | 29.730 | 259 | 171 | 7 | 15 | 264 | 11 | 267 | 2.00e-26 | 104 |
MS.gene63403.t1 | MTR_4g058820 | 29.730 | 259 | 171 | 7 | 15 | 264 | 11 | 267 | 2.00e-26 | 104 |
MS.gene63403.t1 | MTR_1196s0010 | 32.510 | 243 | 153 | 6 | 20 | 259 | 279 | 513 | 1.06e-24 | 103 |
MS.gene63403.t1 | MTR_7g083870 | 30.216 | 278 | 172 | 8 | 1 | 260 | 14 | 287 | 2.78e-23 | 96.7 |
MS.gene63403.t1 | MTR_4g131740 | 30.739 | 257 | 166 | 7 | 15 | 262 | 40 | 293 | 9.36e-22 | 92.4 |
MS.gene63403.t1 | MTR_4g052350 | 30.651 | 261 | 160 | 11 | 15 | 264 | 14 | 264 | 1.42e-21 | 91.7 |
MS.gene63403.t1 | MTR_7g107670 | 28.016 | 257 | 159 | 7 | 20 | 260 | 38 | 284 | 3.79e-20 | 88.2 |
MS.gene63403.t1 | MTR_4g052320 | 28.235 | 255 | 175 | 6 | 15 | 264 | 8 | 259 | 4.49e-20 | 87.4 |
MS.gene63403.t1 | MTR_3g020670 | 31.636 | 275 | 161 | 12 | 3 | 260 | 6 | 270 | 8.37e-20 | 87.0 |
MS.gene63403.t1 | MTR_6g023990 | 29.104 | 268 | 171 | 9 | 4 | 259 | 2 | 262 | 1.26e-19 | 86.3 |
MS.gene63403.t1 | MTR_6g023590 | 27.715 | 267 | 175 | 8 | 4 | 259 | 2 | 261 | 1.79e-19 | 85.5 |
MS.gene63403.t1 | MTR_7g113650 | 31.641 | 256 | 164 | 8 | 15 | 262 | 40 | 292 | 2.32e-19 | 85.9 |
MS.gene63403.t1 | MTR_3g068075 | 82.000 | 50 | 8 | 1 | 123 | 171 | 1 | 50 | 3.95e-19 | 80.1 |
MS.gene63403.t1 | MTR_8g442750 | 28.125 | 256 | 169 | 6 | 15 | 259 | 14 | 265 | 5.76e-19 | 84.7 |
MS.gene63403.t1 | MTR_1g051165 | 26.172 | 256 | 175 | 8 | 21 | 263 | 20 | 274 | 7.65e-19 | 84.3 |
MS.gene63403.t1 | MTR_4g058830 | 34.146 | 164 | 101 | 6 | 106 | 264 | 52 | 213 | 8.36e-19 | 82.8 |
MS.gene63403.t1 | MTR_4g052340 | 28.125 | 256 | 173 | 7 | 15 | 264 | 14 | 264 | 9.51e-19 | 84.0 |
MS.gene63403.t1 | MTR_4g078630 | 29.670 | 273 | 168 | 10 | 3 | 260 | 8 | 271 | 1.90e-18 | 83.2 |
MS.gene63403.t1 | MTR_4g052300 | 28.405 | 257 | 171 | 9 | 15 | 264 | 8 | 258 | 3.36e-18 | 82.0 |
MS.gene63403.t1 | MTR_1g068955 | 30.859 | 256 | 158 | 9 | 20 | 263 | 19 | 267 | 9.54e-18 | 81.3 |
MS.gene63403.t1 | MTR_1g082760 | 27.907 | 258 | 173 | 7 | 15 | 263 | 40 | 293 | 1.22e-17 | 81.3 |
MS.gene63403.t1 | MTR_6g023600 | 28.090 | 267 | 174 | 8 | 4 | 259 | 2 | 261 | 3.52e-17 | 79.3 |
MS.gene63403.t1 | MTR_7g105590 | 31.551 | 187 | 119 | 6 | 15 | 197 | 8 | 189 | 3.99e-17 | 77.8 |
MS.gene63403.t1 | MTR_5g098650 | 68.627 | 51 | 16 | 0 | 221 | 271 | 124 | 174 | 1.98e-16 | 75.5 |
MS.gene63403.t1 | MTR_6g023950 | 27.170 | 265 | 179 | 8 | 4 | 259 | 2 | 261 | 2.51e-16 | 77.0 |
MS.gene63403.t1 | MTR_7g105460 | 27.500 | 280 | 177 | 11 | 4 | 270 | 2 | 268 | 2.61e-16 | 77.0 |
MS.gene63403.t1 | MTR_7g105580 | 27.451 | 255 | 151 | 8 | 15 | 260 | 8 | 237 | 4.11e-16 | 76.3 |
MS.gene63403.t1 | MTR_6g023610 | 27.636 | 275 | 177 | 10 | 4 | 265 | 2 | 267 | 4.54e-16 | 76.3 |
MS.gene63403.t1 | MTR_2g090165 | 27.068 | 266 | 183 | 7 | 11 | 269 | 2 | 263 | 1.80e-15 | 74.7 |
MS.gene63403.t1 | MTR_8g044240 | 27.632 | 228 | 149 | 7 | 15 | 233 | 69 | 289 | 5.69e-15 | 73.9 |
MS.gene63403.t1 | MTR_8g089575 | 30.348 | 201 | 131 | 5 | 20 | 213 | 50 | 248 | 5.98e-15 | 73.9 |
MS.gene63403.t1 | MTR_7g110140 | 27.481 | 262 | 182 | 6 | 11 | 267 | 2 | 260 | 6.13e-15 | 73.2 |
MS.gene63403.t1 | MTR_6g023600 | 27.715 | 267 | 169 | 8 | 4 | 259 | 2 | 255 | 1.12e-14 | 72.4 |
MS.gene63403.t1 | MTR_7g110130 | 26.641 | 259 | 177 | 7 | 11 | 261 | 2 | 255 | 1.48e-14 | 72.0 |
MS.gene63403.t1 | MTR_1579s0020 | 35.227 | 88 | 56 | 1 | 181 | 268 | 1 | 87 | 4.96e-14 | 66.6 |
MS.gene63403.t1 | MTR_4g134660 | 31.138 | 167 | 112 | 2 | 21 | 184 | 12 | 178 | 5.73e-14 | 70.1 |
MS.gene63403.t1 | MTR_7g110160 | 28.016 | 257 | 157 | 7 | 11 | 261 | 2 | 236 | 9.69e-14 | 69.3 |
MS.gene63403.t1 | MTR_6g041980 | 34.247 | 146 | 84 | 5 | 15 | 154 | 64 | 203 | 3.55e-12 | 65.5 |
MS.gene63403.t1 | MTR_6g035395 | 27.059 | 255 | 165 | 7 | 12 | 261 | 2 | 240 | 3.75e-12 | 65.1 |
MS.gene63403.t1 | MTR_3g098470 | 34.459 | 148 | 94 | 3 | 8 | 154 | 25 | 170 | 3.80e-12 | 65.9 |
MS.gene63403.t1 | MTR_6g041980 | 30.144 | 209 | 122 | 6 | 15 | 205 | 64 | 266 | 6.69e-12 | 65.1 |
MS.gene63403.t1 | MTR_3g113870 | 26.667 | 180 | 126 | 4 | 28 | 205 | 34 | 209 | 1.39e-11 | 63.2 |
MS.gene63403.t1 | MTR_1275s0010 | 23.600 | 250 | 150 | 5 | 10 | 250 | 153 | 370 | 1.71e-11 | 64.3 |
MS.gene63403.t1 | MTR_7g105570 | 28.191 | 188 | 116 | 7 | 94 | 270 | 46 | 225 | 1.82e-11 | 62.8 |
MS.gene63403.t1 | MTR_7g080410 | 26.519 | 181 | 127 | 4 | 22 | 197 | 45 | 224 | 2.00e-11 | 63.5 |
MS.gene63403.t1 | MTR_7g080410 | 26.519 | 181 | 127 | 4 | 22 | 197 | 45 | 224 | 2.76e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63403.t1 | AT5G06060 | 69.380 | 258 | 79 | 0 | 12 | 269 | 6 | 263 | 4.68e-138 | 389 |
MS.gene63403.t1 | AT2G29290 | 60.311 | 257 | 100 | 1 | 12 | 266 | 4 | 260 | 2.00e-118 | 340 |
MS.gene63403.t1 | AT2G29260 | 61.176 | 255 | 99 | 0 | 12 | 266 | 65 | 319 | 2.85e-117 | 339 |
MS.gene63403.t1 | AT2G29150 | 60.000 | 265 | 104 | 2 | 1 | 264 | 1 | 264 | 4.88e-115 | 331 |
MS.gene63403.t1 | AT2G29360 | 59.004 | 261 | 107 | 0 | 4 | 264 | 5 | 265 | 1.11e-114 | 330 |
MS.gene63403.t1 | AT1G07440 | 59.701 | 268 | 102 | 3 | 1 | 266 | 1 | 264 | 1.25e-114 | 330 |
MS.gene63403.t1 | AT2G29350 | 59.091 | 264 | 107 | 1 | 1 | 264 | 1 | 263 | 7.95e-114 | 328 |
MS.gene63403.t1 | AT1G07450 | 59.289 | 253 | 102 | 1 | 12 | 264 | 5 | 256 | 3.90e-111 | 321 |
MS.gene63403.t1 | AT2G29330 | 60.465 | 258 | 98 | 3 | 12 | 266 | 4 | 260 | 2.98e-110 | 319 |
MS.gene63403.t1 | AT2G29340 | 57.143 | 259 | 109 | 1 | 12 | 268 | 4 | 262 | 3.31e-109 | 316 |
MS.gene63403.t1 | AT2G29340 | 57.588 | 257 | 107 | 1 | 12 | 266 | 4 | 260 | 1.07e-108 | 317 |
MS.gene63403.t1 | AT2G30670 | 58.498 | 253 | 105 | 0 | 12 | 264 | 4 | 256 | 3.67e-108 | 314 |
MS.gene63403.t1 | AT2G29370 | 54.789 | 261 | 118 | 0 | 4 | 264 | 5 | 265 | 2.42e-107 | 312 |
MS.gene63403.t1 | AT2G29320 | 58.366 | 257 | 104 | 2 | 13 | 266 | 11 | 267 | 2.52e-105 | 307 |
MS.gene63403.t1 | AT2G29310 | 56.917 | 253 | 109 | 0 | 12 | 264 | 4 | 256 | 4.82e-105 | 306 |
MS.gene63403.t1 | AT2G29290 | 58.403 | 238 | 97 | 1 | 31 | 266 | 6 | 243 | 1.29e-104 | 304 |
MS.gene63403.t1 | AT2G29300 | 56.589 | 258 | 109 | 2 | 12 | 266 | 4 | 261 | 5.97e-103 | 300 |
MS.gene63403.t1 | AT2G29300 | 56.400 | 250 | 108 | 1 | 12 | 260 | 4 | 253 | 3.28e-99 | 292 |
MS.gene63403.t1 | AT2G29350 | 59.111 | 225 | 91 | 1 | 40 | 264 | 2 | 225 | 1.13e-96 | 283 |
MS.gene63403.t1 | AT2G29320 | 57.741 | 239 | 98 | 2 | 31 | 266 | 11 | 249 | 3.22e-95 | 280 |
MS.gene63403.t1 | AT2G29310 | 55.983 | 234 | 103 | 0 | 31 | 264 | 21 | 254 | 2.02e-93 | 276 |
MS.gene63403.t1 | AT2G29350 | 60.294 | 204 | 81 | 0 | 1 | 204 | 1 | 204 | 1.03e-88 | 263 |
MS.gene63403.t1 | AT2G29340 | 56.061 | 198 | 87 | 0 | 12 | 209 | 4 | 201 | 4.16e-80 | 240 |
MS.gene63403.t1 | AT2G29340 | 56.061 | 198 | 87 | 0 | 12 | 209 | 4 | 201 | 4.16e-80 | 240 |
MS.gene63403.t1 | AT2G29310 | 56.061 | 198 | 87 | 0 | 12 | 209 | 4 | 201 | 4.19e-78 | 235 |
MS.gene63403.t1 | AT2G29320 | 58.639 | 191 | 78 | 1 | 13 | 202 | 11 | 201 | 2.83e-77 | 233 |
MS.gene63403.t1 | AT1G07440 | 58.140 | 172 | 69 | 1 | 1 | 172 | 1 | 169 | 1.14e-67 | 207 |
MS.gene63403.t1 | AT2G29310 | 54.749 | 179 | 81 | 0 | 31 | 209 | 21 | 199 | 2.91e-66 | 205 |
MS.gene63403.t1 | AT2G29170 | 57.843 | 102 | 42 | 1 | 1 | 101 | 1 | 102 | 1.09e-34 | 121 |
MS.gene63403.t1 | AT4G05530 | 32.114 | 246 | 162 | 5 | 15 | 259 | 9 | 250 | 6.69e-32 | 118 |
MS.gene63403.t1 | AT5G18210 | 32.950 | 261 | 160 | 7 | 10 | 259 | 3 | 259 | 1.48e-30 | 115 |
MS.gene63403.t1 | AT3G03980 | 31.227 | 269 | 166 | 8 | 6 | 259 | 5 | 269 | 1.59e-29 | 112 |
MS.gene63403.t1 | AT1G24360 | 30.364 | 247 | 159 | 7 | 21 | 261 | 80 | 319 | 3.91e-29 | 112 |
MS.gene63403.t1 | AT4G13180 | 32.432 | 259 | 165 | 8 | 10 | 261 | 8 | 263 | 1.65e-28 | 110 |
MS.gene63403.t1 | AT5G18210 | 32.234 | 273 | 156 | 9 | 10 | 271 | 3 | 257 | 1.04e-26 | 105 |
MS.gene63403.t1 | AT3G46170 | 29.457 | 258 | 171 | 7 | 15 | 263 | 26 | 281 | 2.95e-25 | 101 |
MS.gene63403.t1 | AT3G55310 | 30.769 | 260 | 165 | 11 | 15 | 263 | 17 | 272 | 1.10e-24 | 100 |
MS.gene63403.t1 | AT1G54870 | 33.463 | 257 | 158 | 8 | 15 | 262 | 84 | 336 | 1.17e-24 | 101 |
MS.gene63403.t1 | AT1G54870 | 33.463 | 257 | 158 | 8 | 15 | 262 | 82 | 334 | 1.24e-24 | 100 |
MS.gene63403.t1 | AT3G55290 | 29.344 | 259 | 170 | 9 | 15 | 263 | 18 | 273 | 3.96e-24 | 98.6 |
MS.gene63403.t1 | AT3G55290 | 30.000 | 260 | 167 | 11 | 15 | 263 | 17 | 272 | 4.27e-24 | 98.6 |
MS.gene63403.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 15 | 271 | 4.92e-24 | 98.6 |
MS.gene63403.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 19 | 275 | 4.96e-24 | 98.6 |
MS.gene63403.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 17 | 273 | 5.53e-24 | 98.2 |
MS.gene63403.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 13 | 269 | 6.91e-24 | 97.8 |
MS.gene63403.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 22 | 278 | 7.04e-24 | 98.2 |
MS.gene63403.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 15 | 271 | 7.16e-24 | 97.8 |
MS.gene63403.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 14 | 270 | 7.64e-24 | 97.8 |
MS.gene63403.t1 | AT1G62610 | 28.185 | 259 | 174 | 8 | 15 | 263 | 19 | 275 | 9.25e-24 | 97.8 |
MS.gene63403.t1 | AT3G05260 | 33.208 | 265 | 165 | 7 | 6 | 262 | 28 | 288 | 2.03e-23 | 97.1 |
MS.gene63403.t1 | AT2G17845 | 28.897 | 263 | 171 | 9 | 15 | 264 | 47 | 306 | 4.49e-23 | 96.3 |
MS.gene63403.t1 | AT3G04000 | 31.734 | 271 | 165 | 8 | 4 | 258 | 3 | 269 | 1.10e-22 | 94.7 |
MS.gene63403.t1 | AT3G26760 | 29.699 | 266 | 169 | 7 | 8 | 260 | 30 | 290 | 3.89e-22 | 93.6 |
MS.gene63403.t1 | AT3G51680 | 33.166 | 199 | 123 | 5 | 15 | 205 | 32 | 228 | 2.30e-20 | 89.0 |
MS.gene63403.t1 | AT1G52340 | 29.658 | 263 | 163 | 8 | 15 | 260 | 18 | 275 | 2.56e-19 | 85.5 |
MS.gene63403.t1 | AT2G47120 | 28.195 | 266 | 171 | 12 | 11 | 267 | 2 | 256 | 4.18e-19 | 84.7 |
MS.gene63403.t1 | AT3G12800 | 26.070 | 257 | 174 | 7 | 15 | 259 | 10 | 262 | 4.52e-19 | 85.1 |
MS.gene63403.t1 | AT2G47120 | 28.244 | 262 | 168 | 12 | 15 | 267 | 7 | 257 | 6.05e-19 | 84.3 |
MS.gene63403.t1 | AT4G03140 | 26.562 | 256 | 174 | 6 | 15 | 260 | 78 | 329 | 1.55e-18 | 84.3 |
MS.gene63403.t1 | AT2G47130 | 28.682 | 258 | 171 | 8 | 11 | 261 | 2 | 253 | 3.97e-17 | 79.3 |
MS.gene63403.t1 | AT5G04900 | 29.778 | 225 | 141 | 8 | 18 | 233 | 80 | 296 | 1.03e-15 | 76.3 |
MS.gene63403.t1 | AT3G42960 | 29.183 | 257 | 158 | 9 | 20 | 260 | 13 | 261 | 1.08e-14 | 72.8 |
MS.gene63403.t1 | AT1G10310 | 33.939 | 165 | 106 | 3 | 21 | 184 | 21 | 183 | 1.24e-14 | 72.0 |
MS.gene63403.t1 | AT2G47140 | 27.734 | 256 | 169 | 8 | 15 | 261 | 6 | 254 | 4.89e-14 | 70.5 |
MS.gene63403.t1 | AT4G13250 | 25.581 | 258 | 153 | 8 | 19 | 243 | 163 | 414 | 1.21e-13 | 70.9 |
MS.gene63403.t1 | AT1G24470 | 26.961 | 204 | 132 | 6 | 20 | 213 | 55 | 251 | 1.57e-13 | 69.7 |
MS.gene63403.t1 | AT3G26770 | 25.940 | 266 | 175 | 7 | 15 | 264 | 41 | 300 | 3.63e-13 | 68.6 |
MS.gene63403.t1 | AT5G10050 | 26.291 | 213 | 143 | 4 | 21 | 232 | 11 | 210 | 6.38e-13 | 67.8 |
MS.gene63403.t1 | AT5G65205 | 30.556 | 180 | 114 | 6 | 21 | 197 | 12 | 183 | 6.54e-13 | 67.8 |
MS.gene63403.t1 | AT3G06060 | 25.743 | 202 | 143 | 2 | 9 | 207 | 31 | 228 | 5.50e-12 | 65.5 |
MS.gene63403.t1 | AT4G09750 | 30.144 | 209 | 122 | 6 | 15 | 205 | 41 | 243 | 6.20e-12 | 65.1 |
MS.gene63403.t1 | AT3G06060 | 25.743 | 202 | 143 | 2 | 9 | 207 | 48 | 245 | 6.62e-12 | 65.1 |
MS.gene63403.t1 | AT3G47350 | 26.540 | 211 | 140 | 7 | 20 | 221 | 49 | 253 | 1.79e-11 | 63.9 |
MS.gene63403.t1 | AT3G03330 | 26.904 | 197 | 139 | 3 | 6 | 197 | 32 | 228 | 2.22e-11 | 63.5 |
MS.gene63403.t1 | AT3G47350 | 26.540 | 211 | 140 | 7 | 20 | 221 | 49 | 253 | 2.35e-11 | 63.5 |
Find 50 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCCTCTGCTTAAAGAATC+TGG | 0.325649 | 3.4:-69111658 | MS.gene63403:CDS |
AATGGGCGAAAGACAATATA+AGG | 0.356013 | 3.4:-69111430 | MS.gene63403:CDS |
GGACAGATTGTTTCTGTTGA+TGG | 0.357615 | 3.4:-69109816 | MS.gene63403:CDS |
GGTTCTGCTATACGCTTTAT+CGG | 0.380929 | 3.4:+69109897 | None:intergenic |
GTGGAAGAACTCGCTGAGTT+TGG | 0.400596 | 3.4:-69112161 | MS.gene63403:CDS |
CTGCTTAAAGAATCTGGAAA+TGG | 0.406314 | 3.4:-69111652 | MS.gene63403:CDS |
GAAGCCAACAATTGAGTATA+CGG | 0.419549 | 3.4:-69111746 | MS.gene63403:CDS |
CGAGAGCGTTGAATCCTTTG+AGG | 0.442296 | 3.4:+69112219 | None:intergenic |
ACCGGCGGAACGCGTGGAAT+CGG | 0.443421 | 3.4:-69112194 | MS.gene63403:CDS |
GGATTAGGTAATCCTCATGC+TGG | 0.447027 | 3.4:+69109767 | None:intergenic |
GATGGAGGATTTACTGTGAA+TGG | 0.451398 | 3.4:-69109798 | MS.gene63403:CDS |
TCAGCCGTATACTCAATTGT+TGG | 0.456707 | 3.4:+69111742 | None:intergenic |
TCTCTCACAAGCATAGGTTC+TGG | 0.458121 | 3.4:-69111601 | MS.gene63403:CDS |
TGCATACCATCTATGTCAAT+TGG | 0.460251 | 3.4:-69111683 | MS.gene63403:CDS |
AGCGTTTATTCAGCTCCTCT+TGG | 0.468728 | 3.4:+69112111 | None:intergenic |
GAAAGTGATGACTACTAACT+TGG | 0.480086 | 3.4:-69111710 | MS.gene63403:CDS |
CTCGTCACCGGCGGAACGCG+TGG | 0.489333 | 3.4:-69112200 | MS.gene63403:CDS |
TCCGATTCCACGCGTTCCGC+CGG | 0.497124 | 3.4:+69112193 | None:intergenic |
TGAGTTTAGGTGAACAATGC+TGG | 0.497981 | 3.4:-69111781 | MS.gene63403:intron |
AATGTTGCTTCTTCTTTCAA+CGG | 0.501278 | 3.4:-69112002 | MS.gene63403:CDS |
CCAGCTGCTTCCTACATCAC+TGG | 0.520639 | 3.4:-69109837 | MS.gene63403:CDS |
GGATTCAACGCTCTCGTCAC+CGG | 0.529505 | 3.4:-69112212 | MS.gene63403:CDS |
ACCACATGAAGTGTCTTCCT+TGG | 0.531653 | 3.4:-69109877 | MS.gene63403:CDS |
TGATGTAGGAAGCAGCTGGC+AGG | 0.543439 | 3.4:+69109841 | None:intergenic |
TTAAACGAGTGGAAAGAGAA+AGG | 0.546612 | 3.4:-69112089 | MS.gene63403:CDS |
AGCGTCTATGCAGCAAGTAA+AGG | 0.551642 | 3.4:-69111577 | MS.gene63403:intron |
AACAATCTGTCCAGTGATGT+AGG | 0.551671 | 3.4:+69109827 | None:intergenic |
GATGTACCAATTGACATAGA+TGG | 0.556385 | 3.4:+69111677 | None:intergenic |
ATCTTCTTCTTCTCAAAGAG+AGG | 0.556668 | 3.4:-69112036 | MS.gene63403:CDS |
TTTCCAGATTCTTTAAGCAG+AGG | 0.567292 | 3.4:+69111655 | None:intergenic |
GATTAGGTAATCCTCATGCT+GGG | 0.570838 | 3.4:+69109768 | None:intergenic |
CAGATTGTTTCTGTTGATGG+AGG | 0.575569 | 3.4:-69109813 | MS.gene63403:CDS |
GAGAGCGTTGAATCCTTTGA+GGG | 0.575644 | 3.4:+69112220 | None:intergenic |
AGCTCAAGATGGTCCCTCAA+AGG | 0.580641 | 3.4:-69112233 | MS.gene63403:CDS |
AGGAAGCAGCTGGCAGGCAA+AGG | 0.580855 | 3.4:+69109847 | None:intergenic |
CACTTGTTCTAGAAACCAAG+AGG | 0.591688 | 3.4:-69112126 | MS.gene63403:CDS |
CCAGTGATGTAGGAAGCAGC+TGG | 0.595402 | 3.4:+69109837 | None:intergenic |
AGCATTACATGTTCCACAAG+TGG | 0.604747 | 3.4:+69111374 | None:intergenic |
GTTGCATCTCTCACAAGCAT+AGG | 0.610660 | 3.4:-69111607 | MS.gene63403:CDS |
GCAGTAGCAGAAGCTCAAGA+TGG | 0.612756 | 3.4:-69112244 | MS.gene63403:CDS |
ATGGATTTCAACCCAGCATG+AGG | 0.617391 | 3.4:-69109779 | MS.gene63403:CDS |
TGAATAAACGCTTAAACGAG+TGG | 0.622975 | 3.4:-69112100 | MS.gene63403:CDS |
GGAGCAACTGCGTTGCACCC+TGG | 0.632107 | 3.4:-69111409 | MS.gene63403:CDS |
TGGAATCGGACATGCTATCG+TGG | 0.642183 | 3.4:-69112180 | MS.gene63403:CDS |
TTCAACGCTCTCGTCACCGG+CGG | 0.643369 | 3.4:-69112209 | MS.gene63403:CDS |
GTATACGAAAACACCACTTG+TGG | 0.645433 | 3.4:-69111387 | MS.gene63403:CDS |
ACCAAGGAAGACACTTCATG+TGG | 0.707139 | 3.4:+69109876 | None:intergenic |
CAGGCAAAGGAAAGTCACCA+AGG | 0.712267 | 3.4:+69109860 | None:intergenic |
TCTAGAACAAGTGTAAACTG+TGG | 0.727754 | 3.4:+69112136 | None:intergenic |
ACAATGCTGGAACAAATGTG+AGG | 0.761871 | 3.4:-69111768 | MS.gene63403:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTAGTATTAATCTATAAA+TGG | - | chr3.4:69112017-69112036 | MS.gene63403:CDS | 15.0% |
!! | CAAAAGAAAATATATAGAAA+AGG | + | chr3.4:69110080-69110099 | None:intergenic | 15.0% |
!!! | TATTCTTCTATTTTGTTATT+AGG | - | chr3.4:69110808-69110827 | MS.gene63403:intron | 15.0% |
!! | AATTCTTTAGATTATTGAAC+AGG | - | chr3.4:69110951-69110970 | MS.gene63403:intron | 20.0% |
!! | ATCCATTATATTTAAGCAAA+AGG | + | chr3.4:69110509-69110528 | None:intergenic | 20.0% |
!! | TAGAACCAAAAAGAATAAAT+TGG | - | chr3.4:69111219-69111238 | MS.gene63403:intron | 20.0% |
!! | TTTGTAATCATGATTTGATT+TGG | - | chr3.4:69110741-69110760 | MS.gene63403:intron | 20.0% |
!!! | AACCTTTTGCTTAAATATAA+TGG | - | chr3.4:69110504-69110523 | MS.gene63403:intron | 20.0% |
!!! | AGTAACCAATTTATTCTTTT+TGG | + | chr3.4:69111227-69111246 | None:intergenic | 20.0% |
!!! | TTTTGCTTAAATATAATGGA+TGG | - | chr3.4:69110508-69110527 | MS.gene63403:intron | 20.0% |
! | AAAAAATCTTGCTTGTGAAT+GGG | - | chr3.4:69110583-69110602 | MS.gene63403:intron | 25.0% |
! | ATCAAAATTGCTTGCATATT+TGG | - | chr3.4:69110977-69110996 | MS.gene63403:intron | 25.0% |
! | ATGTATATGATACACAATTG+TGG | - | chr3.4:69111555-69111574 | MS.gene63403:intron | 25.0% |
! | ATTCATTTAGTATTGCATAC+AGG | - | chr3.4:69111453-69111472 | MS.gene63403:CDS | 25.0% |
! | ATTGAAGATATATCCAATGT+CGG | + | chr3.4:69110173-69110192 | None:intergenic | 25.0% |
! | ATTGGTCATTGTTTAATCAA+GGG | - | chr3.4:69110778-69110797 | MS.gene63403:intron | 25.0% |
! | ATTGTTTAATCAAGGGAATA+TGG | - | chr3.4:69110785-69110804 | MS.gene63403:intron | 25.0% |
! | CAATGTAATTACTTCCATAA+AGG | - | chr3.4:69111117-69111136 | MS.gene63403:intron | 25.0% |
! | CATACGAATAAGAAATGAAT+TGG | - | chr3.4:69111761-69111780 | MS.gene63403:CDS | 25.0% |
! | TAAAAAAAATGACAAAGCCA+TGG | + | chr3.4:69110706-69110725 | None:intergenic | 25.0% |
! | TACTCTTATCACAAGTTTAA+TGG | - | chr3.4:69111046-69111065 | MS.gene63403:intron | 25.0% |
! | TCAAAATTGCTTGCATATTT+GGG | - | chr3.4:69110978-69110997 | MS.gene63403:intron | 25.0% |
! | TGATTATCAAATGACCTTTA+TGG | + | chr3.4:69111134-69111153 | None:intergenic | 25.0% |
! | TTCATTTAGTATTGCATACA+GGG | - | chr3.4:69111454-69111473 | MS.gene63403:CDS | 25.0% |
!! | GACATACTAAAACATGATTT+TGG | + | chr3.4:69111615-69111634 | None:intergenic | 25.0% |
!!! | ACATTCATACTCATTTTTGT+AGG | - | chr3.4:69110870-69110889 | MS.gene63403:intron | 25.0% |
AATTCACAATATTTGCACCT+AGG | - | chr3.4:69111178-69111197 | MS.gene63403:intron | 30.0% | |
ACCTTCAATTATTCATTCCA+TGG | - | chr3.4:69110686-69110705 | MS.gene63403:intron | 30.0% | |
AGTCCTCAACTATAAAAGAT+TGG | + | chr3.4:69111637-69111656 | None:intergenic | 30.0% | |
ATAGTTGAGGACTGTATATT+TGG | - | chr3.4:69111644-69111663 | MS.gene63403:CDS | 30.0% | |
ATTAATACTACATGAGCACA+CGG | + | chr3.4:69112010-69112029 | None:intergenic | 30.0% | |
ATTCACAATATTTGCACCTA+GGG | - | chr3.4:69111179-69111198 | MS.gene63403:intron | 30.0% | |
CAAAAAATCTTGCTTGTGAA+TGG | - | chr3.4:69110582-69110601 | MS.gene63403:intron | 30.0% | |
TATGATGTTCTTGTGAGTTT+AGG | - | chr3.4:69110236-69110255 | MS.gene63403:intron | 30.0% | |
TTAAACAATGACCAATCAGT+CGG | + | chr3.4:69110774-69110793 | None:intergenic | 30.0% | |
! | AATGTTGCTTCTTCTTTCAA+CGG | - | chr3.4:69110028-69110047 | MS.gene63403:intron | 30.0% |
! | ATATCTTCAATCAGAAGTGT+CGG | - | chr3.4:69110182-69110201 | MS.gene63403:intron | 30.0% |
! | GATTGGTCATTGTTTAATCA+AGG | - | chr3.4:69110777-69110796 | MS.gene63403:intron | 30.0% |
! | TGTCCAATCTTTTATAGTTG+AGG | - | chr3.4:69111631-69111650 | MS.gene63403:CDS | 30.0% |
! | TTAATGGTTTTCCATGTTGA+CGG | - | chr3.4:69111062-69111081 | MS.gene63403:intron | 30.0% |
!! | AAGAAATGAATTGGCTTTGA+GGG | - | chr3.4:69111770-69111789 | MS.gene63403:CDS | 30.0% |
!! | TAAGAAATGAATTGGCTTTG+AGG | - | chr3.4:69111769-69111788 | MS.gene63403:CDS | 30.0% |
!!! | ACTTTTTTGTTAAGACGCAT+GGG | - | chr3.4:69111813-69111832 | MS.gene63403:intron | 30.0% |
!!! | TTTTGGTTCTAACTGACAAA+TGG | + | chr3.4:69111210-69111229 | None:intergenic | 30.0% |
AATGGGCGAAAGACAATATA+AGG | - | chr3.4:69110600-69110619 | MS.gene63403:intron | 35.0% | |
AATTGCTTGCATATTTGGGA+TGG | - | chr3.4:69110982-69111001 | MS.gene63403:intron | 35.0% | |
ACATACGTGAATCAAACAGA+AGG | + | chr3.4:69111539-69111558 | None:intergenic | 35.0% | |
ATCCCTTCACAAATTGTCTA+TGG | - | chr3.4:69111353-69111372 | MS.gene63403:intron | 35.0% | |
ATCTTCTTCTTCTCAAAGAG+AGG | - | chr3.4:69109994-69110013 | MS.gene63403:intron | 35.0% | |
CTGCTTAAAGAATCTGGAAA+TGG | - | chr3.4:69110378-69110397 | MS.gene63403:intron | 35.0% | |
GAAAGTGATGACTACTAACT+TGG | - | chr3.4:69110320-69110339 | MS.gene63403:intron | 35.0% | |
GAAGCCAACAATTGAGTATA+CGG | - | chr3.4:69110284-69110303 | MS.gene63403:intron | 35.0% | |
GAGGACTGTATATTTGGATA+TGG | - | chr3.4:69111650-69111669 | MS.gene63403:CDS | 35.0% | |
GATGTACCAATTGACATAGA+TGG | + | chr3.4:69110356-69110375 | None:intergenic | 35.0% | |
GCCATGGAATGAATAATTGA+AGG | + | chr3.4:69110690-69110709 | None:intergenic | 35.0% | |
TAATCGTCAGTGTTGTCAAA+TGG | + | chr3.4:69111419-69111438 | None:intergenic | 35.0% | |
TGAATAAACGCTTAAACGAG+TGG | - | chr3.4:69109930-69109949 | MS.gene63403:CDS | 35.0% | |
TGCATACCATCTATGTCAAT+TGG | - | chr3.4:69110347-69110366 | MS.gene63403:intron | 35.0% | |
TTAAACGAGTGGAAAGAGAA+AGG | - | chr3.4:69109941-69109960 | MS.gene63403:CDS | 35.0% | |
TTGGTTTATCTGTGTATGGA+GGG | - | chr3.4:69111919-69111938 | MS.gene63403:intron | 35.0% | |
TTTCCAGATTCTTTAAGCAG+AGG | + | chr3.4:69110378-69110397 | None:intergenic | 35.0% | |
! | GAGAAAGGTTTTTCTGTTCA+TGG | - | chr3.4:69109956-69109975 | MS.gene63403:intron | 35.0% |
! | GATACATTTTTCCGTCAACA+TGG | + | chr3.4:69111076-69111095 | None:intergenic | 35.0% |
! | TCTAGAACAAGTGTAAACTG+TGG | + | chr3.4:69109897-69109916 | None:intergenic | 35.0% |
! | TGGCTCTTTAACATTTTTCC+TGG | - | chr3.4:69111838-69111857 | MS.gene63403:intron | 35.0% |
!! | ATGATTTTGGCATCTTCACA+TGG | + | chr3.4:69111602-69111621 | None:intergenic | 35.0% |
!!! | GACTTTTTTGTTAAGACGCA+TGG | - | chr3.4:69111812-69111831 | MS.gene63403:intron | 35.0% |
AACAATCTGTCCAGTGATGT+AGG | + | chr3.4:69112206-69112225 | None:intergenic | 40.0% | |
AACAGAAGGCAGTGGAATTA+TGG | + | chr3.4:69111525-69111544 | None:intergenic | 40.0% | |
ACAATGCTGGAACAAATGTG+AGG | - | chr3.4:69110262-69110281 | MS.gene63403:intron | 40.0% | |
ACAGTTGTAGCAAGTGATTC+TGG | - | chr3.4:69111705-69111724 | MS.gene63403:CDS | 40.0% | |
AGCATTACATGTTCCACAAG+TGG | + | chr3.4:69110659-69110678 | None:intergenic | 40.0% | |
CACATGGATCAAGGTAACAT+TGG | + | chr3.4:69111586-69111605 | None:intergenic | 40.0% | |
CAGTTGTAGCAAGTGATTCT+GGG | - | chr3.4:69111706-69111725 | MS.gene63403:CDS | 40.0% | |
CATCCTCTGCTTAAAGAATC+TGG | - | chr3.4:69110372-69110391 | MS.gene63403:intron | 40.0% | |
CCTTCACAAATTGTCTATGG+CGG | - | chr3.4:69111356-69111375 | MS.gene63403:intron | 40.0% | |
CGCCATAGACAATTTGTGAA+GGG | + | chr3.4:69111358-69111377 | None:intergenic | 40.0% | |
GATGGAGGATTTACTGTGAA+TGG | - | chr3.4:69112232-69112251 | MS.gene63403:CDS | 40.0% | |
GGGCATCAATATGGCAAATA+TGG | - | chr3.4:69111790-69111809 | MS.gene63403:intron | 40.0% | |
GGTTCTGCTATACGCTTTAT+CGG | + | chr3.4:69112136-69112155 | None:intergenic | 40.0% | |
GTACTTGTCTGTAGTCTTTG+AGG | - | chr3.4:69110922-69110941 | MS.gene63403:intron | 40.0% | |
GTATACGAAAACACCACTTG+TGG | - | chr3.4:69110643-69110662 | MS.gene63403:intron | 40.0% | |
TCAGCCGTATACTCAATTGT+TGG | + | chr3.4:69110291-69110310 | None:intergenic | 40.0% | |
TGAGTTTAGGTGAACAATGC+TGG | - | chr3.4:69110249-69110268 | MS.gene63403:intron | 40.0% | |
TTTGTTAAGACGCATGGGTT+TGG | - | chr3.4:69111818-69111837 | MS.gene63403:intron | 40.0% | |
! | AAGTGGTGTTTTCGTATACC+AGG | + | chr3.4:69110642-69110661 | None:intergenic | 40.0% |
! | AGTGGTGTTTTCGTATACCA+GGG | + | chr3.4:69110641-69110660 | None:intergenic | 40.0% |
! | GTTGGTTTATCTGTGTATGG+AGG | - | chr3.4:69111918-69111937 | MS.gene63403:intron | 40.0% |
! | TGGAGGGTTTTCTGCTATAT+AGG | - | chr3.4:69111935-69111954 | MS.gene63403:intron | 40.0% |
!! | CACTTGTTCTAGAAACCAAG+AGG | - | chr3.4:69109904-69109923 | MS.gene63403:CDS | 40.0% |
!! | CAGATTGTTTCTGTTGATGG+AGG | - | chr3.4:69112217-69112236 | MS.gene63403:CDS | 40.0% |
!! | GGACAGATTGTTTCTGTTGA+TGG | - | chr3.4:69112214-69112233 | MS.gene63403:CDS | 40.0% |
!! | GTGGTTGGTTTATCTGTGTA+TGG | - | chr3.4:69111915-69111934 | MS.gene63403:intron | 40.0% |
ACCAAGGAAGACACTTCATG+TGG | + | chr3.4:69112157-69112176 | None:intergenic | 45.0% | |
AGCGTCTATGCAGCAAGTAA+AGG | - | chr3.4:69110453-69110472 | MS.gene63403:intron | 45.0% | |
AGCGTTTATTCAGCTCCTCT+TGG | + | chr3.4:69109922-69109941 | None:intergenic | 45.0% | |
ATGGATTTCAACCCAGCATG+AGG | - | chr3.4:69112251-69112270 | MS.gene63403:CDS | 45.0% | |
CCGCCATAGACAATTTGTGA+AGG | + | chr3.4:69111359-69111378 | None:intergenic | 45.0% | |
CGATGGTGCAATATGACAGA+AGG | - | chr3.4:69111276-69111295 | MS.gene63403:intron | 45.0% | |
GTGAATCAAACAGAAGGCAG+TGG | + | chr3.4:69111533-69111552 | None:intergenic | 45.0% | |
GTGATTACCAGTGTTGTCGA+TGG | - | chr3.4:69111259-69111278 | MS.gene63403:intron | 45.0% | |
GTTGCATCTCTCACAAGCAT+AGG | - | chr3.4:69110423-69110442 | MS.gene63403:intron | 45.0% | |
TATTGCACCATCGACAACAC+TGG | + | chr3.4:69111269-69111288 | None:intergenic | 45.0% | |
TCTCTCACAAGCATAGGTTC+TGG | - | chr3.4:69110429-69110448 | MS.gene63403:intron | 45.0% | |
TGGCATCTTCACATGGATCA+AGG | + | chr3.4:69111595-69111614 | None:intergenic | 45.0% | |
TTGTAGCAAGTGATTCTGGG+TGG | - | chr3.4:69111709-69111728 | MS.gene63403:CDS | 45.0% | |
! | ACCACATGAAGTGTCTTCCT+TGG | - | chr3.4:69112153-69112172 | MS.gene63403:CDS | 45.0% |
! | GCTGCAATGGCGTATTTCTA+TGG | + | chr3.4:69111312-69111331 | None:intergenic | 45.0% |
! | TTGGATGAACACCGACTGAT+TGG | - | chr3.4:69110760-69110779 | MS.gene63403:intron | 45.0% |
!! | GAGAGCGTTGAATCCTTTGA+GGG | + | chr3.4:69109813-69109832 | None:intergenic | 45.0% |
!! | TGGCTTTGAGGGCATCAATA+TGG | - | chr3.4:69111781-69111800 | MS.gene63403:intron | 45.0% |
ACCACCTACACAAACACAGC+AGG | + | chr3.4:69111900-69111919 | None:intergenic | 50.0% | |
ACTAGAGCATGTGCAGATCC+AGG | + | chr3.4:69111859-69111878 | None:intergenic | 50.0% | |
AGCTCAAGATGGTCCCTCAA+AGG | - | chr3.4:69109797-69109816 | MS.gene63403:CDS | 50.0% | |
CAGGCAAAGGAAAGTCACCA+AGG | + | chr3.4:69112173-69112192 | None:intergenic | 50.0% | |
CATGTGTCTGTGTCCGACAT+TGG | - | chr3.4:69110157-69110176 | MS.gene63403:intron | 50.0% | |
GCAGTAGCAGAAGCTCAAGA+TGG | - | chr3.4:69109786-69109805 | MS.gene63403:CDS | 50.0% | |
GCTGTGTTTGTGTAGGTGGT+TGG | - | chr3.4:69111900-69111919 | MS.gene63403:intron | 50.0% | |
GTGGAAGAACTCGCTGAGTT+TGG | - | chr3.4:69109869-69109888 | MS.gene63403:CDS | 50.0% | |
GTGTTGTCAAATGGCTGCCA+TGG | + | chr3.4:69111410-69111429 | None:intergenic | 50.0% | |
TGGAATCGGACATGCTATCG+TGG | - | chr3.4:69109850-69109869 | MS.gene63403:CDS | 50.0% | |
TGTGCCTGCTGTGTTTGTGT+AGG | - | chr3.4:69111893-69111912 | MS.gene63403:intron | 50.0% | |
!! | CGAGAGCGTTGAATCCTTTG+AGG | + | chr3.4:69109814-69109833 | None:intergenic | 50.0% |
ACCGACACGTCATTCTGCCA+TGG | - | chr3.4:69111390-69111409 | MS.gene63403:CDS | 55.0% | |
CCAGCTGCTTCCTACATCAC+TGG | - | chr3.4:69112193-69112212 | MS.gene63403:CDS | 55.0% | |
CCAGTGATGTAGGAAGCAGC+TGG | + | chr3.4:69112196-69112215 | None:intergenic | 55.0% | |
CTGACAAATGGCGCTTCCCT+AGG | + | chr3.4:69111198-69111217 | None:intergenic | 55.0% | |
GCCATGGCAGAATGACGTGT+CGG | + | chr3.4:69111394-69111413 | None:intergenic | 55.0% | |
GCCTGCTGTGTTTGTGTAGG+TGG | - | chr3.4:69111896-69111915 | MS.gene63403:intron | 55.0% | |
GGATTCAACGCTCTCGTCAC+CGG | - | chr3.4:69109818-69109837 | MS.gene63403:CDS | 55.0% | |
TGATGTAGGAAGCAGCTGGC+AGG | + | chr3.4:69112192-69112211 | None:intergenic | 55.0% | |
TGGCATGGCATAGGCTGCAA+TGG | + | chr3.4:69111325-69111344 | None:intergenic | 55.0% | |
TTGCAGCCTATGCCATGCCA+TGG | - | chr3.4:69111325-69111344 | MS.gene63403:intron | 55.0% | |
TTGTGAAGGGATGCCTGCCA+TGG | + | chr3.4:69111345-69111364 | None:intergenic | 55.0% | |
AAGGGATGCCTGCCATGGCA+TGG | + | chr3.4:69111340-69111359 | None:intergenic | 60.0% | |
AGCCTATGCCATGCCATGGC+AGG | - | chr3.4:69111329-69111348 | MS.gene63403:intron | 60.0% | |
AGGAAGCAGCTGGCAGGCAA+AGG | + | chr3.4:69112186-69112205 | None:intergenic | 60.0% | |
TGCCTGCCATGGCATGGCAT+AGG | + | chr3.4:69111334-69111353 | None:intergenic | 60.0% | |
TTCAACGCTCTCGTCACCGG+CGG | - | chr3.4:69109821-69109840 | MS.gene63403:CDS | 60.0% | |
ACCGGCGGAACGCGTGGAAT+CGG | - | chr3.4:69109836-69109855 | MS.gene63403:CDS | 65.0% | |
GGAGCAACTGCGTTGCACCC+TGG | - | chr3.4:69110621-69110640 | MS.gene63403:intron | 65.0% | |
TCCGATTCCACGCGTTCCGC+CGG | + | chr3.4:69109840-69109859 | None:intergenic | 65.0% | |
CTCGTCACCGGCGGAACGCG+TGG | - | chr3.4:69109830-69109849 | MS.gene63403:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 69109770 | 69112282 | 69109770 | ID=MS.gene63403 |
chr3.4 | mRNA | 69109770 | 69112282 | 69109770 | ID=MS.gene63403.t1;Parent=MS.gene63403 |
chr3.4 | exon | 69111986 | 69112282 | 69111986 | ID=MS.gene63403.t1.exon1;Parent=MS.gene63403.t1 |
chr3.4 | CDS | 69111986 | 69112282 | 69111986 | ID=cds.MS.gene63403.t1;Parent=MS.gene63403.t1 |
chr3.4 | exon | 69111578 | 69111794 | 69111578 | ID=MS.gene63403.t1.exon2;Parent=MS.gene63403.t1 |
chr3.4 | CDS | 69111578 | 69111794 | 69111578 | ID=cds.MS.gene63403.t1;Parent=MS.gene63403.t1 |
chr3.4 | exon | 69111382 | 69111488 | 69111382 | ID=MS.gene63403.t1.exon3;Parent=MS.gene63403.t1 |
chr3.4 | CDS | 69111382 | 69111488 | 69111382 | ID=cds.MS.gene63403.t1;Parent=MS.gene63403.t1 |
chr3.4 | exon | 69109770 | 69109964 | 69109770 | ID=MS.gene63403.t1.exon4;Parent=MS.gene63403.t1 |
chr3.4 | CDS | 69109770 | 69109964 | 69109770 | ID=cds.MS.gene63403.t1;Parent=MS.gene63403.t1 |
Gene Sequence |
Protein sequence |