Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08756.t1 | XP_013455994.1 | 94.9 | 273 | 14 | 0 | 1 | 273 | 1 | 273 | 5.10E-144 | 520.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08756.t1 | Q9X248 | 35.4 | 254 | 154 | 6 | 11 | 264 | 3 | 246 | 3.1e-33 | 143.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08756.t1 | I3T7Z9 | 94.9 | 273 | 14 | 0 | 1 | 273 | 1 | 273 | 3.7e-144 | 520.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08756.t1 | MTR_4g058840 | 94.872 | 273 | 14 | 0 | 1 | 273 | 1 | 273 | 0.0 | 531 |
MS.gene08756.t1 | MTR_4g058820 | 94.872 | 273 | 14 | 0 | 1 | 273 | 1 | 273 | 0.0 | 531 |
MS.gene08756.t1 | MTR_4g058810 | 93.407 | 273 | 18 | 0 | 1 | 273 | 1 | 273 | 0.0 | 526 |
MS.gene08756.t1 | MTR_1g051165 | 70.909 | 275 | 75 | 1 | 4 | 273 | 7 | 281 | 9.99e-143 | 402 |
MS.gene08756.t1 | MTR_4g058830 | 88.398 | 181 | 20 | 1 | 93 | 273 | 40 | 219 | 6.38e-115 | 329 |
MS.gene08756.t1 | MTR_3g085740 | 33.077 | 260 | 164 | 7 | 6 | 264 | 70 | 320 | 1.80e-32 | 121 |
MS.gene08756.t1 | MTR_1g007800 | 31.373 | 255 | 171 | 3 | 14 | 265 | 6 | 259 | 1.20e-29 | 112 |
MS.gene08756.t1 | MTR_4g052320 | 31.599 | 269 | 173 | 6 | 5 | 270 | 2 | 262 | 1.46e-28 | 110 |
MS.gene08756.t1 | MTR_3g068085 | 29.730 | 259 | 171 | 7 | 11 | 267 | 15 | 264 | 2.30e-27 | 107 |
MS.gene08756.t1 | MTR_4g052300 | 30.545 | 275 | 167 | 8 | 5 | 270 | 2 | 261 | 4.63e-27 | 106 |
MS.gene08756.t1 | MTR_3g068070 | 30.268 | 261 | 169 | 9 | 10 | 267 | 14 | 264 | 5.02e-27 | 106 |
MS.gene08756.t1 | MTR_4g052350 | 31.955 | 266 | 163 | 8 | 11 | 270 | 14 | 267 | 4.58e-26 | 103 |
MS.gene08756.t1 | MTR_4g052340 | 30.038 | 263 | 172 | 7 | 11 | 270 | 14 | 267 | 7.13e-25 | 100 |
MS.gene08756.t1 | MTR_3g068065 | 29.615 | 260 | 170 | 10 | 11 | 267 | 17 | 266 | 1.07e-24 | 100 |
MS.gene08756.t1 | MTR_6g023590 | 26.744 | 258 | 172 | 6 | 11 | 261 | 13 | 260 | 2.27e-24 | 99.0 |
MS.gene08756.t1 | MTR_7g110130 | 29.167 | 264 | 163 | 5 | 11 | 264 | 6 | 255 | 2.57e-24 | 99.0 |
MS.gene08756.t1 | MTR_3g068155 | 29.119 | 261 | 172 | 9 | 10 | 267 | 18 | 268 | 4.17e-24 | 98.6 |
MS.gene08756.t1 | MTR_2g090165 | 29.670 | 273 | 164 | 6 | 1 | 264 | 1 | 254 | 6.71e-24 | 97.8 |
MS.gene08756.t1 | MTR_3g068175 | 31.034 | 261 | 167 | 11 | 10 | 267 | 16 | 266 | 2.96e-23 | 96.3 |
MS.gene08756.t1 | MTR_4g064883 | 28.846 | 260 | 172 | 9 | 11 | 267 | 14 | 263 | 3.19e-23 | 95.9 |
MS.gene08756.t1 | MTR_7g063330 | 29.297 | 256 | 171 | 6 | 11 | 263 | 15 | 263 | 1.28e-22 | 94.4 |
MS.gene08756.t1 | MTR_7g110140 | 29.688 | 256 | 171 | 4 | 11 | 264 | 6 | 254 | 1.53e-22 | 94.0 |
MS.gene08756.t1 | MTR_1g082760 | 27.444 | 266 | 181 | 6 | 6 | 266 | 35 | 293 | 5.12e-22 | 93.2 |
MS.gene08756.t1 | MTR_6g023610 | 28.627 | 255 | 155 | 8 | 11 | 253 | 13 | 252 | 9.49e-22 | 92.0 |
MS.gene08756.t1 | MTR_3g068175 | 30.566 | 265 | 167 | 12 | 10 | 267 | 16 | 270 | 4.71e-21 | 90.1 |
MS.gene08756.t1 | MTR_7g094520 | 27.652 | 264 | 182 | 7 | 1 | 261 | 1 | 258 | 1.05e-20 | 89.0 |
MS.gene08756.t1 | MTR_7g063320 | 28.295 | 258 | 174 | 6 | 11 | 264 | 15 | 265 | 1.69e-20 | 88.6 |
MS.gene08756.t1 | MTR_6g035395 | 26.820 | 261 | 159 | 5 | 11 | 264 | 5 | 240 | 1.96e-20 | 88.2 |
MS.gene08756.t1 | MTR_6g023950 | 27.027 | 259 | 170 | 7 | 11 | 261 | 13 | 260 | 2.89e-20 | 87.8 |
MS.gene08756.t1 | MTR_7g063390 | 29.119 | 261 | 168 | 9 | 11 | 264 | 16 | 266 | 3.47e-20 | 87.8 |
MS.gene08756.t1 | MTR_3g087850 | 33.505 | 194 | 114 | 7 | 15 | 206 | 30 | 210 | 5.18e-20 | 87.8 |
MS.gene08756.t1 | MTR_4g131740 | 29.213 | 267 | 166 | 11 | 7 | 262 | 36 | 290 | 5.64e-20 | 87.8 |
MS.gene08756.t1 | MTR_7g083870 | 29.008 | 262 | 168 | 7 | 11 | 263 | 35 | 287 | 6.66e-20 | 87.4 |
MS.gene08756.t1 | MTR_7g110160 | 27.473 | 273 | 152 | 6 | 1 | 264 | 1 | 236 | 8.48e-20 | 86.3 |
MS.gene08756.t1 | MTR_7g094510 | 28.409 | 264 | 165 | 11 | 7 | 261 | 5 | 253 | 1.12e-19 | 86.3 |
MS.gene08756.t1 | MTR_4g064887 | 26.772 | 254 | 179 | 5 | 11 | 264 | 15 | 261 | 1.39e-19 | 85.9 |
MS.gene08756.t1 | MTR_7g113650 | 24.254 | 268 | 183 | 6 | 6 | 264 | 35 | 291 | 4.59e-19 | 85.1 |
MS.gene08756.t1 | MTR_6g023910 | 27.843 | 255 | 157 | 9 | 11 | 253 | 13 | 252 | 4.85e-19 | 84.7 |
MS.gene08756.t1 | MTR_7g071680 | 29.455 | 275 | 163 | 9 | 11 | 263 | 29 | 294 | 5.94e-19 | 85.1 |
MS.gene08756.t1 | MTR_7g105590 | 31.937 | 191 | 121 | 5 | 11 | 200 | 8 | 190 | 3.73e-18 | 80.5 |
MS.gene08756.t1 | MTR_7g063360 | 28.682 | 258 | 173 | 8 | 11 | 264 | 16 | 266 | 3.79e-18 | 82.0 |
MS.gene08756.t1 | MTR_6g023990 | 25.769 | 260 | 172 | 7 | 11 | 261 | 14 | 261 | 6.39e-18 | 81.6 |
MS.gene08756.t1 | MTR_8g442750 | 29.389 | 262 | 169 | 8 | 11 | 264 | 14 | 267 | 1.05e-17 | 81.3 |
MS.gene08756.t1 | MTR_7g063260 | 26.357 | 258 | 177 | 7 | 11 | 263 | 16 | 265 | 1.06e-17 | 80.9 |
MS.gene08756.t1 | MTR_4g132850 | 26.923 | 260 | 176 | 7 | 5 | 262 | 1 | 248 | 2.05e-17 | 79.7 |
MS.gene08756.t1 | MTR_7g105580 | 28.897 | 263 | 154 | 8 | 1 | 261 | 4 | 235 | 2.33e-17 | 79.7 |
MS.gene08756.t1 | MTR_3g020670 | 29.927 | 274 | 160 | 8 | 7 | 263 | 12 | 270 | 2.68e-17 | 80.1 |
MS.gene08756.t1 | MTR_7g063270 | 26.070 | 257 | 178 | 7 | 11 | 263 | 16 | 264 | 2.81e-17 | 79.7 |
MS.gene08756.t1 | MTR_6g023600 | 24.803 | 254 | 182 | 5 | 11 | 261 | 13 | 260 | 4.87e-17 | 79.0 |
MS.gene08756.t1 | MTR_3g087860 | 39.855 | 138 | 76 | 5 | 70 | 206 | 64 | 195 | 7.55e-17 | 79.0 |
MS.gene08756.t1 | MTR_1196s0010 | 27.734 | 256 | 165 | 10 | 9 | 261 | 274 | 512 | 1.10e-16 | 79.7 |
MS.gene08756.t1 | MTR_4g105310 | 27.586 | 261 | 159 | 7 | 17 | 256 | 52 | 303 | 1.33e-16 | 79.0 |
MS.gene08756.t1 | MTR_4g078630 | 28.309 | 272 | 174 | 7 | 2 | 263 | 11 | 271 | 2.10e-16 | 77.4 |
MS.gene08756.t1 | MTR_3g086210 | 30.526 | 190 | 125 | 4 | 13 | 199 | 53 | 238 | 4.39e-16 | 77.0 |
MS.gene08756.t1 | MTR_4g105310 | 29.665 | 209 | 124 | 5 | 17 | 206 | 52 | 256 | 4.42e-16 | 76.3 |
MS.gene08756.t1 | MTR_7g107670 | 28.409 | 264 | 166 | 9 | 11 | 263 | 33 | 284 | 6.44e-16 | 76.3 |
MS.gene08756.t1 | MTR_7g080410 | 30.542 | 203 | 133 | 6 | 1 | 200 | 28 | 225 | 7.81e-16 | 76.3 |
MS.gene08756.t1 | MTR_7g080410 | 30.542 | 203 | 133 | 6 | 1 | 200 | 28 | 225 | 8.90e-16 | 75.9 |
MS.gene08756.t1 | MTR_4g097510 | 29.952 | 207 | 130 | 7 | 14 | 215 | 5 | 201 | 9.34e-16 | 75.9 |
MS.gene08756.t1 | MTR_8g044240 | 29.231 | 195 | 132 | 4 | 16 | 206 | 74 | 266 | 1.47e-15 | 75.9 |
MS.gene08756.t1 | MTR_6g088500 | 25.439 | 228 | 152 | 5 | 5 | 218 | 172 | 395 | 8.12e-15 | 74.3 |
MS.gene08756.t1 | MTR_6g088500 | 25.676 | 222 | 147 | 5 | 5 | 212 | 172 | 389 | 1.39e-14 | 73.2 |
MS.gene08756.t1 | MTR_7g105460 | 25.746 | 268 | 180 | 7 | 11 | 270 | 13 | 269 | 1.68e-14 | 72.0 |
MS.gene08756.t1 | MTR_4g064887 | 27.723 | 202 | 140 | 4 | 10 | 211 | 14 | 209 | 2.16e-14 | 70.9 |
MS.gene08756.t1 | MTR_8g096620 | 28.000 | 200 | 137 | 5 | 9 | 208 | 43 | 235 | 6.56e-14 | 71.2 |
MS.gene08756.t1 | MTR_8g089575 | 26.943 | 193 | 128 | 4 | 13 | 199 | 47 | 232 | 7.69e-14 | 70.5 |
MS.gene08756.t1 | MTR_3g077410 | 25.188 | 266 | 169 | 7 | 12 | 256 | 36 | 292 | 1.50e-13 | 70.1 |
MS.gene08756.t1 | MTR_6g023600 | 24.409 | 254 | 177 | 6 | 11 | 261 | 13 | 254 | 3.88e-13 | 68.2 |
MS.gene08756.t1 | MTR_4g086400 | 27.488 | 211 | 134 | 7 | 12 | 210 | 5 | 208 | 1.03e-12 | 68.2 |
MS.gene08756.t1 | MTR_4g134660 | 28.283 | 198 | 134 | 6 | 11 | 206 | 6 | 197 | 6.01e-12 | 64.3 |
MS.gene08756.t1 | MTR_7g099850 | 24.275 | 276 | 181 | 7 | 2 | 257 | 23 | 290 | 1.80e-11 | 63.9 |
MS.gene08756.t1 | MTR_1g068955 | 25.781 | 256 | 177 | 9 | 5 | 255 | 9 | 256 | 3.47e-11 | 62.8 |
MS.gene08756.t1 | MTR_3g086190 | 28.000 | 200 | 137 | 5 | 13 | 208 | 46 | 242 | 7.17e-11 | 62.0 |
MS.gene08756.t1 | MTR_8g096580 | 26.728 | 217 | 145 | 7 | 2 | 214 | 36 | 242 | 7.17e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08756.t1 | AT3G55290 | 66.912 | 272 | 88 | 2 | 3 | 273 | 10 | 280 | 1.73e-136 | 386 |
MS.gene08756.t1 | AT3G55290 | 66.912 | 272 | 88 | 2 | 3 | 273 | 9 | 279 | 2.15e-136 | 386 |
MS.gene08756.t1 | AT3G55310 | 64.706 | 272 | 94 | 2 | 3 | 273 | 9 | 279 | 3.05e-133 | 378 |
MS.gene08756.t1 | AT3G46170 | 64.706 | 272 | 94 | 2 | 3 | 273 | 18 | 288 | 6.32e-132 | 375 |
MS.gene08756.t1 | AT1G63380 | 63.736 | 273 | 96 | 2 | 3 | 273 | 7 | 278 | 1.82e-131 | 374 |
MS.gene08756.t1 | AT1G63380 | 63.736 | 273 | 96 | 2 | 3 | 273 | 11 | 282 | 2.30e-131 | 374 |
MS.gene08756.t1 | AT1G63380 | 63.736 | 273 | 96 | 2 | 3 | 273 | 9 | 280 | 2.59e-131 | 373 |
MS.gene08756.t1 | AT1G63380 | 63.736 | 273 | 96 | 2 | 3 | 273 | 14 | 285 | 3.88e-131 | 373 |
MS.gene08756.t1 | AT1G62610 | 63.370 | 273 | 97 | 2 | 3 | 273 | 7 | 278 | 2.55e-130 | 370 |
MS.gene08756.t1 | AT1G62610 | 63.370 | 273 | 97 | 2 | 3 | 273 | 5 | 276 | 2.60e-130 | 370 |
MS.gene08756.t1 | AT1G62610 | 63.370 | 273 | 97 | 2 | 3 | 273 | 6 | 277 | 2.61e-130 | 370 |
MS.gene08756.t1 | AT1G62610 | 63.370 | 273 | 97 | 2 | 3 | 273 | 11 | 282 | 3.21e-130 | 370 |
MS.gene08756.t1 | AT2G17845 | 65.169 | 267 | 90 | 2 | 10 | 273 | 46 | 312 | 4.25e-127 | 363 |
MS.gene08756.t1 | AT3G01980 | 32.677 | 254 | 168 | 3 | 13 | 264 | 5 | 257 | 1.35e-41 | 144 |
MS.gene08756.t1 | AT3G01980 | 32.677 | 254 | 168 | 3 | 13 | 264 | 5 | 257 | 1.35e-41 | 144 |
MS.gene08756.t1 | AT3G01980 | 34.101 | 217 | 141 | 2 | 50 | 264 | 17 | 233 | 2.69e-38 | 135 |
MS.gene08756.t1 | AT3G01980 | 29.225 | 284 | 168 | 4 | 13 | 264 | 5 | 287 | 2.94e-35 | 128 |
MS.gene08756.t1 | AT5G06060 | 33.716 | 261 | 160 | 9 | 10 | 267 | 8 | 258 | 7.12e-31 | 116 |
MS.gene08756.t1 | AT1G24360 | 30.418 | 263 | 167 | 8 | 6 | 264 | 69 | 319 | 6.68e-29 | 112 |
MS.gene08756.t1 | AT3G01980 | 32.571 | 175 | 115 | 3 | 13 | 185 | 5 | 178 | 2.47e-25 | 99.4 |
MS.gene08756.t1 | AT3G26770 | 30.072 | 276 | 166 | 9 | 11 | 271 | 41 | 304 | 1.03e-24 | 100 |
MS.gene08756.t1 | AT3G51680 | 31.387 | 274 | 157 | 9 | 11 | 263 | 32 | 295 | 1.74e-24 | 100 |
MS.gene08756.t1 | AT2G29150 | 29.304 | 273 | 178 | 8 | 1 | 267 | 1 | 264 | 1.79e-24 | 99.4 |
MS.gene08756.t1 | AT2G29260 | 29.811 | 265 | 172 | 11 | 6 | 267 | 64 | 317 | 4.68e-24 | 99.4 |
MS.gene08756.t1 | AT2G29370 | 29.091 | 275 | 181 | 8 | 1 | 269 | 1 | 267 | 1.26e-23 | 97.1 |
MS.gene08756.t1 | AT5G18210 | 28.906 | 256 | 170 | 9 | 10 | 259 | 7 | 256 | 2.52e-22 | 93.6 |
MS.gene08756.t1 | AT4G13180 | 29.804 | 255 | 168 | 8 | 11 | 261 | 13 | 260 | 1.16e-21 | 91.7 |
MS.gene08756.t1 | AT1G07440 | 28.625 | 269 | 177 | 10 | 2 | 267 | 4 | 260 | 1.23e-21 | 91.7 |
MS.gene08756.t1 | AT2G29360 | 29.562 | 274 | 177 | 10 | 1 | 267 | 1 | 265 | 1.80e-21 | 91.3 |
MS.gene08756.t1 | AT2G29290 | 26.744 | 258 | 182 | 5 | 10 | 267 | 6 | 256 | 1.98e-21 | 90.9 |
MS.gene08756.t1 | AT3G26760 | 27.652 | 264 | 171 | 5 | 11 | 263 | 36 | 290 | 2.01e-21 | 91.7 |
MS.gene08756.t1 | AT2G29350 | 28.185 | 259 | 176 | 7 | 10 | 267 | 14 | 263 | 2.16e-21 | 91.3 |
MS.gene08756.t1 | AT1G54870 | 26.792 | 265 | 180 | 7 | 6 | 264 | 77 | 333 | 4.41e-21 | 91.3 |
MS.gene08756.t1 | AT1G54870 | 26.792 | 265 | 180 | 7 | 6 | 264 | 79 | 335 | 4.89e-21 | 91.3 |
MS.gene08756.t1 | AT5G65205 | 35.567 | 194 | 110 | 7 | 15 | 206 | 10 | 190 | 9.29e-21 | 89.7 |
MS.gene08756.t1 | AT5G10050 | 34.021 | 194 | 113 | 7 | 15 | 206 | 9 | 189 | 3.23e-20 | 88.2 |
MS.gene08756.t1 | AT2G30670 | 27.132 | 258 | 179 | 7 | 11 | 267 | 7 | 256 | 3.44e-20 | 87.8 |
MS.gene08756.t1 | AT1G52340 | 29.389 | 262 | 172 | 6 | 11 | 263 | 18 | 275 | 1.53e-19 | 86.3 |
MS.gene08756.t1 | AT5G18210 | 29.218 | 243 | 160 | 9 | 10 | 246 | 7 | 243 | 8.86e-19 | 84.0 |
MS.gene08756.t1 | AT1G67730 | 31.579 | 209 | 134 | 5 | 5 | 208 | 41 | 245 | 1.41e-18 | 84.3 |
MS.gene08756.t1 | AT3G47360 | 30.500 | 200 | 132 | 5 | 8 | 207 | 42 | 234 | 2.22e-18 | 83.6 |
MS.gene08756.t1 | AT3G03980 | 27.509 | 269 | 173 | 10 | 6 | 261 | 9 | 268 | 2.99e-18 | 82.4 |
MS.gene08756.t1 | AT1G49670 | 31.754 | 211 | 123 | 7 | 13 | 210 | 6 | 208 | 3.12e-18 | 84.7 |
MS.gene08756.t1 | AT1G49670 | 31.754 | 211 | 123 | 7 | 13 | 210 | 6 | 208 | 3.28e-18 | 84.7 |
MS.gene08756.t1 | AT3G05260 | 25.856 | 263 | 180 | 8 | 6 | 262 | 32 | 285 | 3.59e-18 | 82.8 |
MS.gene08756.t1 | AT2G29290 | 28.191 | 188 | 129 | 5 | 81 | 267 | 57 | 239 | 1.19e-17 | 80.5 |
MS.gene08756.t1 | AT2G29310 | 28.897 | 263 | 168 | 10 | 11 | 267 | 7 | 256 | 1.24e-17 | 80.5 |
MS.gene08756.t1 | AT1G10310 | 30.102 | 196 | 129 | 5 | 11 | 206 | 15 | 202 | 2.09e-17 | 79.7 |
MS.gene08756.t1 | AT1G24470 | 26.214 | 206 | 141 | 5 | 13 | 214 | 52 | 250 | 5.54e-17 | 79.7 |
MS.gene08756.t1 | AT3G42960 | 30.712 | 267 | 152 | 9 | 14 | 263 | 11 | 261 | 1.13e-16 | 78.2 |
MS.gene08756.t1 | AT3G47350 | 28.365 | 208 | 142 | 5 | 8 | 215 | 41 | 241 | 1.70e-16 | 78.2 |
MS.gene08756.t1 | AT3G47350 | 28.365 | 208 | 142 | 5 | 8 | 215 | 41 | 241 | 1.87e-16 | 78.2 |
MS.gene08756.t1 | AT2G47140 | 27.344 | 256 | 177 | 5 | 11 | 264 | 6 | 254 | 2.56e-16 | 77.0 |
MS.gene08756.t1 | AT2G47130 | 26.923 | 260 | 172 | 5 | 11 | 264 | 6 | 253 | 3.16e-16 | 76.6 |
MS.gene08756.t1 | AT2G29350 | 29.379 | 177 | 117 | 6 | 92 | 267 | 56 | 225 | 4.26e-16 | 75.9 |
MS.gene08756.t1 | AT2G47120 | 25.781 | 256 | 179 | 5 | 11 | 264 | 6 | 252 | 5.77e-16 | 75.9 |
MS.gene08756.t1 | AT2G47120 | 25.781 | 256 | 179 | 5 | 11 | 264 | 7 | 253 | 6.47e-16 | 75.9 |
MS.gene08756.t1 | AT5G50690 | 31.100 | 209 | 128 | 8 | 13 | 215 | 47 | 245 | 6.62e-16 | 76.3 |
MS.gene08756.t1 | AT5G50590 | 31.100 | 209 | 128 | 8 | 13 | 215 | 47 | 245 | 6.62e-16 | 76.3 |
MS.gene08756.t1 | AT1G07450 | 26.154 | 260 | 178 | 9 | 11 | 267 | 8 | 256 | 9.19e-16 | 75.5 |
MS.gene08756.t1 | AT5G50690 | 31.282 | 195 | 121 | 7 | 13 | 204 | 47 | 231 | 1.20e-15 | 75.1 |
MS.gene08756.t1 | AT5G50590 | 31.282 | 195 | 121 | 7 | 13 | 204 | 47 | 231 | 1.20e-15 | 75.1 |
MS.gene08756.t1 | AT2G29340 | 26.641 | 259 | 179 | 8 | 11 | 267 | 7 | 256 | 3.74e-15 | 73.9 |
MS.gene08756.t1 | AT2G29340 | 26.538 | 260 | 180 | 8 | 10 | 267 | 6 | 256 | 4.41e-15 | 74.3 |
MS.gene08756.t1 | AT2G29320 | 27.308 | 260 | 177 | 9 | 11 | 267 | 13 | 263 | 6.95e-15 | 73.2 |
MS.gene08756.t1 | AT5G50600 | 31.188 | 202 | 128 | 7 | 9 | 208 | 43 | 235 | 1.03e-14 | 73.6 |
MS.gene08756.t1 | AT5G50700 | 31.188 | 202 | 128 | 7 | 9 | 208 | 43 | 235 | 1.03e-14 | 73.6 |
MS.gene08756.t1 | AT5G61830 | 29.752 | 242 | 118 | 7 | 15 | 207 | 38 | 276 | 1.62e-14 | 72.8 |
MS.gene08756.t1 | AT5G61830 | 29.752 | 242 | 118 | 7 | 15 | 207 | 38 | 276 | 1.62e-14 | 72.8 |
MS.gene08756.t1 | AT4G03140 | 27.547 | 265 | 167 | 8 | 11 | 263 | 78 | 329 | 2.63e-14 | 72.4 |
MS.gene08756.t1 | AT3G29250 | 27.407 | 270 | 159 | 8 | 11 | 264 | 6 | 254 | 3.39e-14 | 71.2 |
MS.gene08756.t1 | AT3G29250 | 25.781 | 256 | 181 | 3 | 11 | 264 | 42 | 290 | 3.59e-14 | 71.6 |
MS.gene08756.t1 | AT3G29260 | 27.308 | 260 | 171 | 6 | 11 | 264 | 6 | 253 | 3.73e-14 | 70.9 |
MS.gene08756.t1 | AT3G29250 | 25.781 | 256 | 181 | 3 | 11 | 264 | 44 | 292 | 4.14e-14 | 71.2 |
MS.gene08756.t1 | AT5G04900 | 27.692 | 195 | 134 | 5 | 16 | 206 | 82 | 273 | 5.43e-14 | 71.2 |
MS.gene08756.t1 | AT3G04000 | 23.466 | 277 | 179 | 10 | 7 | 264 | 10 | 272 | 1.24e-13 | 69.7 |
MS.gene08756.t1 | AT2G29330 | 24.231 | 260 | 184 | 8 | 11 | 267 | 7 | 256 | 8.79e-13 | 67.0 |
MS.gene08756.t1 | AT2G29350 | 29.319 | 191 | 127 | 5 | 10 | 199 | 14 | 197 | 9.42e-13 | 66.6 |
MS.gene08756.t1 | AT2G29300 | 25.769 | 260 | 181 | 8 | 11 | 267 | 7 | 257 | 1.04e-12 | 67.0 |
MS.gene08756.t1 | AT4G05530 | 25.098 | 255 | 175 | 8 | 11 | 262 | 9 | 250 | 1.49e-12 | 66.2 |
MS.gene08756.t1 | AT3G03330 | 28.646 | 192 | 132 | 3 | 11 | 200 | 41 | 229 | 1.78e-12 | 67.0 |
MS.gene08756.t1 | AT2G29310 | 30.435 | 207 | 126 | 9 | 11 | 211 | 7 | 201 | 1.51e-11 | 62.8 |
MS.gene08756.t1 | AT2G37540 | 25.455 | 275 | 177 | 9 | 10 | 265 | 30 | 295 | 2.89e-11 | 63.2 |
MS.gene08756.t1 | AT5G50130 | 25.359 | 209 | 133 | 5 | 17 | 206 | 7 | 211 | 3.43e-11 | 62.8 |
MS.gene08756.t1 | AT2G29300 | 25.391 | 256 | 179 | 8 | 11 | 263 | 7 | 253 | 4.08e-11 | 62.4 |
MS.gene08756.t1 | AT5G50130 | 25.359 | 209 | 133 | 5 | 17 | 206 | 7 | 211 | 4.67e-11 | 62.4 |
Find 77 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGAAGGCGTGGGAGGCTTT+TGG | 0.275675 | 4.2:-44672320 | MS.gene08756:CDS |
ATCAATATCTCTTCAATTGC+TGG | 0.294772 | 4.2:-44670677 | MS.gene08756:CDS |
GTGTTTAAAACAAACATAAA+TGG | 0.315012 | 4.2:-44670764 | MS.gene08756:CDS |
ATTCATAGTGAGGAATAAAT+AGG | 0.326565 | 4.2:+44669452 | None:intergenic |
TGAAGTGCCCCATTCTCTTA+AGG | 0.336024 | 4.2:+44669580 | None:intergenic |
CTTGTCACCGGCGCATCAGC+AGG | 0.346471 | 4.2:-44672524 | MS.gene08756:CDS |
ACAGGTAATGGCATTGGAAA+TGG | 0.347927 | 4.2:-44669714 | MS.gene08756:intron |
GAAGTGCCCCATTCTCTTAA+GGG | 0.360752 | 4.2:+44669581 | None:intergenic |
ACGTGATTTCTGCCTTGATC+TGG | 0.366903 | 4.2:-44672495 | MS.gene08756:CDS |
TGCCTTGATCTGGCTCGTGC+TGG | 0.384037 | 4.2:-44672485 | MS.gene08756:CDS |
TCTTAAGGGTACTGTTCTCT+TGG | 0.392609 | 4.2:+44669595 | None:intergenic |
ATCAATAATGCCGGTGTTAG+AGG | 0.395800 | 4.2:-44672281 | MS.gene08756:intron |
GGTGACAAGGACAACTTTGC+CGG | 0.399560 | 4.2:+44672538 | None:intergenic |
CAGGTAATGGCATTGGAAAT+GGG | 0.401207 | 4.2:-44669713 | MS.gene08756:CDS |
GATGCTGGTGTAACCTTGCC+AGG | 0.405617 | 4.2:-44669479 | MS.gene08756:CDS |
AACAGTACCCTTAAGAGAAT+GGG | 0.418260 | 4.2:-44669588 | MS.gene08756:CDS |
CGGGCAATTGTCCCCTCTCT+AGG | 0.426091 | 4.2:+44670654 | None:intergenic |
GAGCTTGATGTGGCGGCTGA+TGG | 0.434808 | 4.2:-44672365 | MS.gene08756:CDS |
ATTTGAGATTTGAAAAGTCC+TGG | 0.476294 | 4.2:+44669659 | None:intergenic |
GAACAGTACCCTTAAGAGAA+TGG | 0.491792 | 4.2:-44669589 | MS.gene08756:CDS |
CTTGATGTGGCGGCTGATGG+TGG | 0.496263 | 4.2:-44672362 | MS.gene08756:CDS |
CGAGCAATTGATGTCAATGC+TGG | 0.507791 | 4.2:+44669554 | None:intergenic |
GGCAAAGTTGTCCTTGTCAC+CGG | 0.508416 | 4.2:-44672536 | MS.gene08756:CDS |
AGAAGTATGTGCAGAAGGCG+TGG | 0.508562 | 4.2:-44672331 | MS.gene08756:CDS |
GAGGAATAAATAGGAAAGCC+TGG | 0.509947 | 4.2:+44669461 | None:intergenic |
TCCGATCCCTGCTGATGCGC+CGG | 0.512043 | 4.2:+44672517 | None:intergenic |
GCATATGCTTGTTCAAAGGC+AGG | 0.522186 | 4.2:-44670623 | MS.gene08756:CDS |
AATATATTTATTGCTGATGC+TGG | 0.523150 | 4.2:-44669494 | MS.gene08756:CDS |
GATTCTTCTGAATATGTGAC+AGG | 0.524490 | 4.2:-44669518 | MS.gene08756:CDS |
TGGAATTGACTGAGGAGGAA+TGG | 0.528283 | 4.2:-44670793 | MS.gene08756:CDS |
CTGCTGATGCGCCGGTGACA+AGG | 0.532114 | 4.2:+44672525 | None:intergenic |
TTCAATTGCTGGCCTAGAGA+GGG | 0.532544 | 4.2:-44670666 | MS.gene08756:CDS |
TAATTGACAGGTAATGGCAT+TGG | 0.550875 | 4.2:-44669720 | MS.gene08756:intron |
AAGTCTCCGTGCAGTTGCGG+TGG | 0.551617 | 4.2:-44672387 | MS.gene08756:CDS |
CTTCAATTGCTGGCCTAGAG+AGG | 0.552027 | 4.2:-44670667 | MS.gene08756:CDS |
AAACAAACATAAATGGTACA+TGG | 0.552103 | 4.2:-44670757 | MS.gene08756:CDS |
AGGAAATGTGAGTTCACCCT+TGG | 0.553066 | 4.2:-44670813 | MS.gene08756:CDS |
CTAGAGAGGGGACAATTGCC+CGG | 0.556034 | 4.2:-44670653 | MS.gene08756:CDS |
TTCCTCCTCAGTCAATTCCA+AGG | 0.561664 | 4.2:+44670796 | None:intergenic |
AAACATAAATGGTACATGGT+TGG | 0.562444 | 4.2:-44670753 | MS.gene08756:CDS |
AGGTAATGGCATTGGAAATG+GGG | 0.563034 | 4.2:-44669712 | MS.gene08756:CDS |
ATTCAAATTACCTCTAACAC+CGG | 0.563895 | 4.2:+44672271 | None:intergenic |
ATCCAGCACGAGCCAGATCA+AGG | 0.564390 | 4.2:+44672483 | None:intergenic |
TATAGAGAAGTATGTGCAGA+AGG | 0.570186 | 4.2:-44672336 | MS.gene08756:CDS |
GAAGTATGTGCAGAAGGCGT+GGG | 0.571173 | 4.2:-44672330 | MS.gene08756:CDS |
GAACCATGGCACGACCTCGC+CGG | 0.574081 | 4.2:-44672557 | MS.gene08756:CDS |
GATGAAATCAATGGAAAGGA+GGG | 0.578092 | 4.2:-44672410 | MS.gene08756:CDS |
TTGCCGGCGAGGTCGTGCCA+TGG | 0.580382 | 4.2:+44672554 | None:intergenic |
GGGAAGTCTCCGTGCAGTTG+CGG | 0.586746 | 4.2:-44672390 | MS.gene08756:CDS |
AATTGCATATGCTTGTTCAA+AGG | 0.589192 | 4.2:-44670627 | MS.gene08756:CDS |
TGCGGTGGAGCTTGATGTGG+CGG | 0.592898 | 4.2:-44672372 | MS.gene08756:CDS |
AACTCATGCGTGATTCAAAG+AGG | 0.594350 | 4.2:-44670712 | MS.gene08756:CDS |
CAAGGACAACTTTGCCGGCG+AGG | 0.595256 | 4.2:+44672543 | None:intergenic |
CAAGCATATGCAATTCCACC+GGG | 0.595751 | 4.2:+44670635 | None:intergenic |
ACCGGCGCATCAGCAGGGAT+CGG | 0.598824 | 4.2:-44672518 | MS.gene08756:CDS |
TCCTCCTCAGTCAATTCCAA+GGG | 0.607693 | 4.2:+44670797 | None:intergenic |
CATATCAAGTATTCATAGTG+AGG | 0.608610 | 4.2:+44669442 | None:intergenic |
TGGCAAAGCAACTAGAACCA+TGG | 0.609409 | 4.2:-44672571 | MS.gene08756:CDS |
TCATTGTGTGATGAAATCAA+TGG | 0.617419 | 4.2:-44672419 | MS.gene08756:CDS |
ACCCTTGGAATTGACTGAGG+AGG | 0.618106 | 4.2:-44670798 | MS.gene08756:CDS |
TGATGAAATCAATGGAAAGG+AGG | 0.620320 | 4.2:-44672411 | MS.gene08756:CDS |
ATGCGTGATTCAAAGAGGAA+AGG | 0.620679 | 4.2:-44670707 | MS.gene08756:CDS |
TTGTCACCGGCGCATCAGCA+GGG | 0.621162 | 4.2:-44672523 | MS.gene08756:CDS |
ATAAATAGGAAAGCCTGGCA+AGG | 0.625510 | 4.2:+44669466 | None:intergenic |
ACAAGCATATGCAATTCCAC+CGG | 0.630032 | 4.2:+44670634 | None:intergenic |
GTATGTGCAGAAGGCGTGGG+AGG | 0.631713 | 4.2:-44672327 | MS.gene08756:CDS |
TCAATTGCTGGCCTAGAGAG+GGG | 0.637165 | 4.2:-44670665 | MS.gene08756:CDS |
CAAGCTCCACCGCAACTGCA+CGG | 0.638345 | 4.2:+44672381 | None:intergenic |
AGGTGTCAATATGCTAACAA+AGG | 0.644536 | 4.2:-44670603 | MS.gene08756:intron |
AGTTGCGGTGGAGCTTGATG+TGG | 0.644706 | 4.2:-44672375 | MS.gene08756:CDS |
GTGTGATGAAATCAATGGAA+AGG | 0.648715 | 4.2:-44672414 | MS.gene08756:CDS |
TTCACCCTTGGAATTGACTG+AGG | 0.656324 | 4.2:-44670801 | MS.gene08756:CDS |
AGAGTGAATTCAATATCACC+AGG | 0.658398 | 4.2:-44669677 | MS.gene08756:CDS |
GATGTGTTGATCAATAATGC+CGG | 0.669788 | 4.2:-44672290 | MS.gene08756:CDS |
ACAGTACCCTTAAGAGAATG+GGG | 0.676856 | 4.2:-44669587 | MS.gene08756:CDS |
GGTAATGGCATTGGAAATGG+GGG | 0.681681 | 4.2:-44669711 | MS.gene08756:CDS |
GAGAGGGGACAATTGCCCGG+TGG | 0.736062 | 4.2:-44670650 | MS.gene08756:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATAATTTTTTAAAATATA+AGG | - | chr4.2:44671015-44671034 | MS.gene08756:intron | 0.0% |
!!! | AAAACTAATACTATTTTTTA+AGG | + | chr4.2:44670401-44670420 | None:intergenic | 10.0% |
!!! | AAAATTTTCAAAAACAAAAT+TGG | - | chr4.2:44671683-44671702 | MS.gene08756:intron | 10.0% |
!!! | ATTATAGTAGTATATATTTT+TGG | + | chr4.2:44670797-44670816 | None:intergenic | 10.0% |
!! | AAAGACAAACATTAAATAAA+AGG | + | chr4.2:44671765-44671784 | None:intergenic | 15.0% |
!! | AGTCTAATACTTATAATATA+AGG | + | chr4.2:44670555-44670574 | None:intergenic | 15.0% |
!! | GTCTAATACTTATAATATAA+GGG | + | chr4.2:44670554-44670573 | None:intergenic | 15.0% |
!! | TGAATATTCATAAACTAAAA+GGG | - | chr4.2:44672028-44672047 | MS.gene08756:intron | 15.0% |
!! | TGTATGAAAAAAATATTGTA+AGG | - | chr4.2:44670873-44670892 | MS.gene08756:intron | 15.0% |
!!! | TTAATAATTTTAAGTGTATG+TGG | + | chr4.2:44671155-44671174 | None:intergenic | 15.0% |
!!! | TTAATCTTATACTTTTATCT+TGG | + | chr4.2:44670953-44670972 | None:intergenic | 15.0% |
!!! | TTGTTTTTCTTCTTATAATA+AGG | - | chr4.2:44671893-44671912 | MS.gene08756:intron | 15.0% |
!! | AAAAATTGATGAAGAAAGAT+TGG | - | chr4.2:44672395-44672414 | MS.gene08756:CDS | 20.0% |
!! | CTTGTGTAAAAAATATGATA+AGG | - | chr4.2:44671546-44671565 | MS.gene08756:intron | 20.0% |
!! | GTGAATATTCATAAACTAAA+AGG | - | chr4.2:44672027-44672046 | MS.gene08756:intron | 20.0% |
!! | GTTGAAAAGTGATAAAAAAT+GGG | + | chr4.2:44672153-44672172 | None:intergenic | 20.0% |
!! | TAGCATGTATATTTACAAAA+AGG | - | chr4.2:44670594-44670613 | MS.gene08756:intron | 20.0% |
!! | TGTTGAAAAGTGATAAAAAA+TGG | + | chr4.2:44672154-44672173 | None:intergenic | 20.0% |
!! | TTTCTTCTTATAATAAGGAT+CGG | - | chr4.2:44671898-44671917 | MS.gene08756:intron | 20.0% |
!!! | AAGGTATTAAAGTGAAATAT+TGG | + | chr4.2:44670382-44670401 | None:intergenic | 20.0% |
!!! | AATTTTCTTACATATAAGAG+CGG | + | chr4.2:44671669-44671688 | None:intergenic | 20.0% |
!!! | ATATTTTCAAGTTACCAAAA+TGG | - | chr4.2:44670662-44670681 | MS.gene08756:CDS | 20.0% |
!!! | ATTTTAAACATTAGACACTT+TGG | - | chr4.2:44670496-44670515 | MS.gene08756:intron | 20.0% |
!!! | GTGTTTAAAACAAACATAAA+TGG | - | chr4.2:44671262-44671281 | MS.gene08756:intron | 20.0% |
!!! | TTTTGGTAACTTGAAAATAT+TGG | + | chr4.2:44670662-44670681 | None:intergenic | 20.0% |
!!! | TTTTTGTAATGATAATTGAC+AGG | - | chr4.2:44672294-44672313 | MS.gene08756:CDS | 20.0% |
! | AAACAAACATAAATGGTACA+TGG | - | chr4.2:44671269-44671288 | MS.gene08756:intron | 25.0% |
! | AATATATTTATTGCTGATGC+TGG | - | chr4.2:44672532-44672551 | MS.gene08756:CDS | 25.0% |
! | ATATACATGCTAGTAACTTA+AGG | + | chr4.2:44670586-44670605 | None:intergenic | 25.0% |
! | ATGATTTATTGTTTGTGTGA+AGG | - | chr4.2:44670137-44670156 | MS.gene08756:intron | 25.0% |
! | GCTGAAACATATAATTATAC+CGG | - | chr4.2:44669847-44669866 | MS.gene08756:intron | 25.0% |
! | TAATGATAATTGACAGGTAA+TGG | - | chr4.2:44672300-44672319 | MS.gene08756:CDS | 25.0% |
! | TATACATGCTAGTAACTTAA+GGG | + | chr4.2:44670585-44670604 | None:intergenic | 25.0% |
! | TATATAAAGATTGACTGCTT+TGG | - | chr4.2:44671110-44671129 | MS.gene08756:intron | 25.0% |
! | TGTGACATCTTCTTATAAAT+AGG | + | chr4.2:44671710-44671729 | None:intergenic | 25.0% |
! | TTCGAGAAAATCATATAATC+CGG | + | chr4.2:44669869-44669888 | None:intergenic | 25.0% |
!! | ACACTGATTAACAATTGTAT+TGG | - | chr4.2:44671858-44671877 | MS.gene08756:intron | 25.0% |
!!! | TTGATTCAAAAAGTTGATGA+TGG | - | chr4.2:44670085-44670104 | MS.gene08756:intron | 25.0% |
AAACATAAATGGTACATGGT+TGG | - | chr4.2:44671273-44671292 | MS.gene08756:intron | 30.0% | |
AATTGCATATGCTTGTTCAA+AGG | - | chr4.2:44671399-44671418 | MS.gene08756:intron | 30.0% | |
ACGTTTAAATCTACCAAGTA+CGG | - | chr4.2:44669782-44669801 | MS.gene08756:intron | 30.0% | |
ATCAATATCTCTTCAATTGC+TGG | - | chr4.2:44671349-44671368 | MS.gene08756:intron | 30.0% | |
ATTCAAATTACCTCTAACAC+CGG | + | chr4.2:44669758-44669777 | None:intergenic | 30.0% | |
CATTTAAACCCGTAACATTT+CGG | + | chr4.2:44671513-44671532 | None:intergenic | 30.0% | |
GATTTATTGTTGTGTTGTGT+AGG | - | chr4.2:44671193-44671212 | MS.gene08756:intron | 30.0% | |
GTCTAACATTTACAACTTGA+TGG | - | chr4.2:44670625-44670644 | MS.gene08756:CDS | 30.0% | |
TACAACTTGATGGAACTAAA+GGG | - | chr4.2:44670635-44670654 | MS.gene08756:CDS | 30.0% | |
TCATTGTGTGATGAAATCAA+TGG | - | chr4.2:44669607-44669626 | MS.gene08756:CDS | 30.0% | |
TTACAACTTGATGGAACTAA+AGG | - | chr4.2:44670634-44670653 | MS.gene08756:CDS | 30.0% | |
TTATCTTAGCTAATGCCTTA+AGG | + | chr4.2:44672071-44672090 | None:intergenic | 30.0% | |
TTCTTATAATAAGGATCGGA+GGG | - | chr4.2:44671902-44671921 | MS.gene08756:intron | 30.0% | |
! | AGAAGATGTCACAACTTTTA+AGG | - | chr4.2:44671717-44671736 | MS.gene08756:intron | 30.0% |
! | ATCGTTCTTTATTTGAGATG+TGG | - | chr4.2:44670161-44670180 | MS.gene08756:intron | 30.0% |
! | ATTTGAGATTTGAAAAGTCC+TGG | + | chr4.2:44672370-44672389 | None:intergenic | 30.0% |
!! | AAATGTTAAAGAGTGCCTTT+AGG | + | chr4.2:44672210-44672229 | None:intergenic | 30.0% |
!! | AAGTGCTTTTGATTCCATTT+TGG | + | chr4.2:44670679-44670698 | None:intergenic | 30.0% |
!! | AATGGAATCAAAAGCACTTA+TGG | - | chr4.2:44670680-44670699 | MS.gene08756:CDS | 30.0% |
!! | AATGTTAAAGAGTGCCTTTA+GGG | + | chr4.2:44672209-44672228 | None:intergenic | 30.0% |
!! | ATGGAATCAAAAGCACTTAT+GGG | - | chr4.2:44670681-44670700 | MS.gene08756:CDS | 30.0% |
!! | TTTTAAGTGTATGTGGTCAA+AGG | + | chr4.2:44671148-44671167 | None:intergenic | 30.0% |
AACAGTACCCTTAAGAGAAT+GGG | - | chr4.2:44672438-44672457 | MS.gene08756:CDS | 35.0% | |
AAGCGGTGCAATATTGAAAA+GGG | - | chr4.2:44670188-44670207 | MS.gene08756:intron | 35.0% | |
ACTCAGAGATCAAAGTGAAA+CGG | - | chr4.2:44670726-44670745 | MS.gene08756:CDS | 35.0% | |
AGAGTGAATTCAATATCACC+AGG | - | chr4.2:44672349-44672368 | MS.gene08756:CDS | 35.0% | |
AGGTGTCAATATGCTAACAA+AGG | - | chr4.2:44671423-44671442 | MS.gene08756:intron | 35.0% | |
ATTGTGATTCCTTACGCTAT+CGG | - | chr4.2:44670421-44670440 | MS.gene08756:intron | 35.0% | |
CACTTGGATGATATAGCTTA+TGG | + | chr4.2:44671062-44671081 | None:intergenic | 35.0% | |
CTTCTTATAATAAGGATCGG+AGG | - | chr4.2:44671901-44671920 | MS.gene08756:intron | 35.0% | |
GATAGATATTAGACACGACA+TGG | + | chr4.2:44669954-44669973 | None:intergenic | 35.0% | |
GATGAAATCAATGGAAAGGA+GGG | - | chr4.2:44669616-44669635 | MS.gene08756:CDS | 35.0% | |
GATTCTTCTGAATATGTGAC+AGG | - | chr4.2:44672508-44672527 | MS.gene08756:CDS | 35.0% | |
GTGTGATGAAATCAATGGAA+AGG | - | chr4.2:44669612-44669631 | MS.gene08756:CDS | 35.0% | |
TACAGATATTAGACACGACA+TGG | + | chr4.2:44669919-44669938 | None:intergenic | 35.0% | |
TGATGAAATCAATGGAAAGG+AGG | - | chr4.2:44669615-44669634 | MS.gene08756:CDS | 35.0% | |
TTCTTACATATAAGAGCGGA+GGG | + | chr4.2:44671665-44671684 | None:intergenic | 35.0% | |
TTGGATGATATAGCTTATGG+TGG | + | chr4.2:44671059-44671078 | None:intergenic | 35.0% | |
TTTCTTACATATAAGAGCGG+AGG | + | chr4.2:44671666-44671685 | None:intergenic | 35.0% | |
TTTGCTAACAAGTGTCCTTA+AGG | - | chr4.2:44672053-44672072 | MS.gene08756:intron | 35.0% | |
! | AGCACTTTTCTTCGAATGAT+TGG | - | chr4.2:44670819-44670838 | MS.gene08756:intron | 35.0% |
! | ATTAGTCACTTTCAGTCACT+TGG | + | chr4.2:44671078-44671097 | None:intergenic | 35.0% |
! | GAGTTTTGCTACATATGTAG+CGG | + | chr4.2:44670324-44670343 | None:intergenic | 35.0% |
! | GATGTGTTGATCAATAATGC+CGG | - | chr4.2:44669736-44669755 | MS.gene08756:intron | 35.0% |
! | TAATTGACAGGTAATGGCAT+TGG | - | chr4.2:44672306-44672325 | MS.gene08756:CDS | 35.0% |
! | TATAGAGAAGTATGTGCAGA+AGG | - | chr4.2:44669690-44669709 | MS.gene08756:CDS | 35.0% |
! | TCTTTTATCCAATGCCCTAA+AGG | - | chr4.2:44672192-44672211 | MS.gene08756:intron | 35.0% |
!! | ATGTTTGTTTTCGTGTGACT+TGG | - | chr4.2:44671460-44671479 | MS.gene08756:intron | 35.0% |
!!! | GAGGGAGTATTTGTTTTCTT+TGG | - | chr4.2:44671920-44671939 | MS.gene08756:intron | 35.0% |
AACTCATGCGTGATTCAAAG+AGG | - | chr4.2:44671314-44671333 | MS.gene08756:intron | 40.0% | |
ACAAGCATATGCAATTCCAC+CGG | + | chr4.2:44671395-44671414 | None:intergenic | 40.0% | |
ACAGTACCCTTAAGAGAATG+GGG | - | chr4.2:44672439-44672458 | MS.gene08756:CDS | 40.0% | |
ATAAATAGGAAAGCCTGGCA+AGG | + | chr4.2:44672563-44672582 | None:intergenic | 40.0% | |
ATGCGTGATTCAAAGAGGAA+AGG | - | chr4.2:44671319-44671338 | MS.gene08756:intron | 40.0% | |
CAAGCGGTGCAATATTGAAA+AGG | - | chr4.2:44670187-44670206 | MS.gene08756:intron | 40.0% | |
GAACAGTACCCTTAAGAGAA+TGG | - | chr4.2:44672437-44672456 | MS.gene08756:CDS | 40.0% | |
GAGGAATAAATAGGAAAGCC+TGG | + | chr4.2:44672568-44672587 | None:intergenic | 40.0% | |
GTCATGTGACCGAAATGTTA+CGG | - | chr4.2:44671501-44671520 | MS.gene08756:intron | 40.0% | |
TCATGTGACCGAAATGTTAC+GGG | - | chr4.2:44671502-44671521 | MS.gene08756:intron | 40.0% | |
TGATACATTAAAGCTCTCGC+AGG | + | chr4.2:44671617-44671636 | None:intergenic | 40.0% | |
TGTCGTGTTAGTGTTAGACA+CGG | + | chr4.2:44669824-44669843 | None:intergenic | 40.0% | |
! | ACAGGTAATGGCATTGGAAA+TGG | - | chr4.2:44672312-44672331 | MS.gene08756:CDS | 40.0% |
! | AGGTAATGGCATTGGAAATG+GGG | - | chr4.2:44672314-44672333 | MS.gene08756:CDS | 40.0% |
! | ATCAATAATGCCGGTGTTAG+AGG | - | chr4.2:44669745-44669764 | MS.gene08756:intron | 40.0% |
! | ATTTGAGATGTGGTACCAAG+CGG | - | chr4.2:44670171-44670190 | MS.gene08756:intron | 40.0% |
! | CAGGTAATGGCATTGGAAAT+GGG | - | chr4.2:44672313-44672332 | MS.gene08756:CDS | 40.0% |
! | CTTTTCAATATTGCACCGCT+TGG | + | chr4.2:44670189-44670208 | None:intergenic | 40.0% |
! | TGCGAGAGCTTTAATGTATC+AGG | - | chr4.2:44671616-44671635 | MS.gene08756:intron | 40.0% |
!! | ATCTAAAGAGTGTCCGTACT+TGG | + | chr4.2:44669798-44669817 | None:intergenic | 40.0% |
!! | CTATCGGTGTTGAACACTTT+GGG | - | chr4.2:44670437-44670456 | MS.gene08756:intron | 40.0% |
!! | GGAGGGAGTATTAGAACAAA+GGG | + | chr4.2:44671648-44671667 | None:intergenic | 40.0% |
!! | TCTTAAGGGTACTGTTCTCT+TGG | + | chr4.2:44672434-44672453 | None:intergenic | 40.0% |
ACGTGATTTCTGCCTTGATC+TGG | - | chr4.2:44669531-44669550 | MS.gene08756:CDS | 45.0% | |
AGGAAATGTGAGTTCACCCT+TGG | - | chr4.2:44671213-44671232 | MS.gene08756:intron | 45.0% | |
CAAGCATATGCAATTCCACC+GGG | + | chr4.2:44671394-44671413 | None:intergenic | 45.0% | |
CGAGCAATTGATGTCAATGC+TGG | + | chr4.2:44672475-44672494 | None:intergenic | 45.0% | |
GCATATGCTTGTTCAAAGGC+AGG | - | chr4.2:44671403-44671422 | MS.gene08756:intron | 45.0% | |
TCCTCCTCAGTCAATTCCAA+GGG | + | chr4.2:44671232-44671251 | None:intergenic | 45.0% | |
TGGAATTGACTGAGGAGGAA+TGG | - | chr4.2:44671233-44671252 | MS.gene08756:intron | 45.0% | |
TGGCAAAGCAACTAGAACCA+TGG | - | chr4.2:44669455-44669474 | MS.gene08756:CDS | 45.0% | |
TGTTCAACACCGATAGCGTA+AGG | + | chr4.2:44670433-44670452 | None:intergenic | 45.0% | |
TTCACCCTTGGAATTGACTG+AGG | - | chr4.2:44671225-44671244 | MS.gene08756:intron | 45.0% | |
TTCCTCCTCAGTCAATTCCA+AGG | + | chr4.2:44671233-44671252 | None:intergenic | 45.0% | |
! | CGAGATTCTTTTCAGACCGT+AGG | - | chr4.2:44671591-44671610 | MS.gene08756:intron | 45.0% |
! | GAAGTGCCCCATTCTCTTAA+GGG | + | chr4.2:44672448-44672467 | None:intergenic | 45.0% |
! | GGTAATGGCATTGGAAATGG+GGG | - | chr4.2:44672315-44672334 | MS.gene08756:CDS | 45.0% |
! | TGAAGTGCCCCATTCTCTTA+AGG | + | chr4.2:44672449-44672468 | None:intergenic | 45.0% |
! | TGCTGGATGTTTTGTGATCG+CGG | - | chr4.2:44669558-44669577 | MS.gene08756:CDS | 45.0% |
! | TTCAATTGCTGGCCTAGAGA+GGG | - | chr4.2:44671360-44671379 | MS.gene08756:intron | 45.0% |
!! | AAAGAGTGCCTTTAGGGCAT+TGG | + | chr4.2:44672203-44672222 | None:intergenic | 45.0% |
!! | CGGAGGGAGTATTAGAACAA+AGG | + | chr4.2:44671649-44671668 | None:intergenic | 45.0% |
!! | GCTATCGGTGTTGAACACTT+TGG | - | chr4.2:44670436-44670455 | MS.gene08756:intron | 45.0% |
ACCCTTGGAATTGACTGAGG+AGG | - | chr4.2:44671228-44671247 | MS.gene08756:intron | 50.0% | |
GGCAAAGTTGTCCTTGTCAC+CGG | - | chr4.2:44669490-44669509 | MS.gene08756:CDS | 50.0% | |
GGTGACAAGGACAACTTTGC+CGG | + | chr4.2:44669491-44669510 | None:intergenic | 50.0% | |
TTAAAGCTCTCGCAGGCCTA+CGG | + | chr4.2:44671610-44671629 | None:intergenic | 50.0% | |
! | AGAAGTATGTGCAGAAGGCG+TGG | - | chr4.2:44669695-44669714 | MS.gene08756:CDS | 50.0% |
! | CTTCAATTGCTGGCCTAGAG+AGG | - | chr4.2:44671359-44671378 | MS.gene08756:intron | 50.0% |
! | GAAGTATGTGCAGAAGGCGT+GGG | - | chr4.2:44669696-44669715 | MS.gene08756:CDS | 50.0% |
! | TCAATTGCTGGCCTAGAGAG+GGG | - | chr4.2:44671361-44671380 | MS.gene08756:intron | 50.0% |
AGTTGCGGTGGAGCTTGATG+TGG | - | chr4.2:44669651-44669670 | MS.gene08756:CDS | 55.0% | |
ATCCAGCACGAGCCAGATCA+AGG | + | chr4.2:44669546-44669565 | None:intergenic | 55.0% | |
CTAGAGAGGGGACAATTGCC+CGG | - | chr4.2:44671373-44671392 | MS.gene08756:intron | 55.0% | |
GATGCTGGTGTAACCTTGCC+AGG | - | chr4.2:44672547-44672566 | MS.gene08756:CDS | 55.0% | |
AAGTCTCCGTGCAGTTGCGG+TGG | - | chr4.2:44669639-44669658 | MS.gene08756:CDS | 60.0% | |
CAAGCTCCACCGCAACTGCA+CGG | + | chr4.2:44669648-44669667 | None:intergenic | 60.0% | |
CAAGGACAACTTTGCCGGCG+AGG | + | chr4.2:44669486-44669505 | None:intergenic | 60.0% | |
CGGGCAATTGTCCCCTCTCT+AGG | + | chr4.2:44671375-44671394 | None:intergenic | 60.0% | |
CTTGATGTGGCGGCTGATGG+TGG | - | chr4.2:44669664-44669683 | MS.gene08756:CDS | 60.0% | |
GAGCTTGATGTGGCGGCTGA+TGG | - | chr4.2:44669661-44669680 | MS.gene08756:CDS | 60.0% | |
GGGAAGTCTCCGTGCAGTTG+CGG | - | chr4.2:44669636-44669655 | MS.gene08756:CDS | 60.0% | |
TGCGGTGGAGCTTGATGTGG+CGG | - | chr4.2:44669654-44669673 | MS.gene08756:CDS | 60.0% | |
TTGTCACCGGCGCATCAGCA+GGG | - | chr4.2:44669503-44669522 | MS.gene08756:CDS | 60.0% | |
! | GTATGTGCAGAAGGCGTGGG+AGG | - | chr4.2:44669699-44669718 | MS.gene08756:CDS | 60.0% |
! | TGCCTTGATCTGGCTCGTGC+TGG | - | chr4.2:44669541-44669560 | MS.gene08756:CDS | 60.0% |
!! | CAGAAGGCGTGGGAGGCTTT+TGG | - | chr4.2:44669706-44669725 | MS.gene08756:CDS | 60.0% |
ACCGGCGCATCAGCAGGGAT+CGG | - | chr4.2:44669508-44669527 | MS.gene08756:CDS | 65.0% | |
CTTGTCACCGGCGCATCAGC+AGG | - | chr4.2:44669502-44669521 | MS.gene08756:CDS | 65.0% | |
GAACCATGGCACGACCTCGC+CGG | - | chr4.2:44669469-44669488 | MS.gene08756:CDS | 65.0% | |
GAGAGGGGACAATTGCCCGG+TGG | - | chr4.2:44671376-44671395 | MS.gene08756:intron | 65.0% | |
TCCGATCCCTGCTGATGCGC+CGG | + | chr4.2:44669512-44669531 | None:intergenic | 65.0% | |
! | CTGCTGATGCGCCGGTGACA+AGG | + | chr4.2:44669504-44669523 | None:intergenic | 65.0% |
TTGCCGGCGAGGTCGTGCCA+TGG | + | chr4.2:44669475-44669494 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 44669454 | 44672594 | 44669454 | ID=MS.gene08756 |
chr4.2 | mRNA | 44669454 | 44672594 | 44669454 | ID=MS.gene08756.t1;Parent=MS.gene08756 |
chr4.2 | exon | 44672282 | 44672594 | 44672282 | ID=MS.gene08756.t1.exon1;Parent=MS.gene08756.t1 |
chr4.2 | CDS | 44672282 | 44672594 | 44672282 | ID=cds.MS.gene08756.t1;Parent=MS.gene08756.t1 |
chr4.2 | exon | 44670604 | 44670833 | 44670604 | ID=MS.gene08756.t1.exon2;Parent=MS.gene08756.t1 |
chr4.2 | CDS | 44670604 | 44670833 | 44670604 | ID=cds.MS.gene08756.t1;Parent=MS.gene08756.t1 |
chr4.2 | exon | 44669454 | 44669732 | 44669454 | ID=MS.gene08756.t1.exon3;Parent=MS.gene08756.t1 |
chr4.2 | CDS | 44669454 | 44669732 | 44669454 | ID=cds.MS.gene08756.t1;Parent=MS.gene08756.t1 |
Gene Sequence |
Protein sequence |