Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63483.t1 | KEH34737.1 | 95.9 | 269 | 11 | 0 | 1 | 269 | 1 | 269 | 1.80E-141 | 511.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63483.t1 | Q9LHT0 | 70.2 | 258 | 77 | 0 | 12 | 269 | 6 | 263 | 2.2e-103 | 376.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63483.t1 | A0A072UYU2 | 95.9 | 269 | 11 | 0 | 1 | 269 | 1 | 269 | 1.3e-141 | 511.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63483.t1 | MTR_3g068070 | 95.911 | 269 | 11 | 0 | 1 | 269 | 1 | 269 | 0.0 | 533 |
MS.gene63483.t1 | MTR_3g068085 | 88.258 | 264 | 31 | 0 | 1 | 264 | 1 | 264 | 5.07e-168 | 466 |
MS.gene63483.t1 | MTR_3g068065 | 84.000 | 250 | 40 | 0 | 15 | 264 | 17 | 266 | 2.64e-157 | 439 |
MS.gene63483.t1 | MTR_3g068155 | 74.517 | 259 | 66 | 0 | 6 | 264 | 10 | 268 | 1.62e-146 | 411 |
MS.gene63483.t1 | MTR_3g068175 | 70.611 | 262 | 76 | 1 | 4 | 264 | 5 | 266 | 4.63e-139 | 392 |
MS.gene63483.t1 | MTR_3g068175 | 69.549 | 266 | 76 | 2 | 4 | 264 | 5 | 270 | 6.60e-137 | 387 |
MS.gene63483.t1 | MTR_4g064883 | 62.598 | 254 | 95 | 0 | 12 | 265 | 11 | 264 | 1.81e-125 | 358 |
MS.gene63483.t1 | MTR_4g064887 | 58.779 | 262 | 108 | 0 | 1 | 262 | 1 | 262 | 2.14e-117 | 337 |
MS.gene63483.t1 | MTR_7g063320 | 58.113 | 265 | 107 | 1 | 1 | 261 | 1 | 265 | 7.24e-111 | 320 |
MS.gene63483.t1 | MTR_7g063270 | 58.397 | 262 | 106 | 1 | 2 | 260 | 3 | 264 | 2.36e-107 | 311 |
MS.gene63483.t1 | MTR_7g063260 | 58.175 | 263 | 106 | 1 | 2 | 260 | 3 | 265 | 7.44e-107 | 310 |
MS.gene63483.t1 | MTR_7g063330 | 57.034 | 263 | 110 | 1 | 1 | 260 | 1 | 263 | 6.75e-106 | 308 |
MS.gene63483.t1 | MTR_7g063390 | 56.439 | 264 | 111 | 2 | 2 | 261 | 3 | 266 | 1.19e-105 | 307 |
MS.gene63483.t1 | MTR_7g063360 | 57.576 | 264 | 108 | 2 | 2 | 261 | 3 | 266 | 2.02e-105 | 307 |
MS.gene63483.t1 | MTR_4g064883 | 63.636 | 198 | 72 | 0 | 12 | 209 | 11 | 208 | 1.85e-96 | 282 |
MS.gene63483.t1 | MTR_4g064887 | 59.330 | 209 | 85 | 0 | 1 | 209 | 1 | 209 | 3.03e-91 | 269 |
MS.gene63483.t1 | MTR_7g063270 | 48.473 | 262 | 83 | 3 | 2 | 260 | 3 | 215 | 5.73e-78 | 235 |
MS.gene63483.t1 | MTR_4g132850 | 33.740 | 246 | 158 | 4 | 15 | 259 | 7 | 248 | 3.29e-36 | 129 |
MS.gene63483.t1 | MTR_7g094510 | 32.806 | 253 | 158 | 7 | 15 | 259 | 6 | 254 | 1.22e-31 | 117 |
MS.gene63483.t1 | MTR_7g094520 | 32.812 | 256 | 154 | 8 | 15 | 259 | 11 | 259 | 1.42e-30 | 115 |
MS.gene63483.t1 | MTR_3g085740 | 31.707 | 246 | 157 | 6 | 21 | 261 | 81 | 320 | 2.13e-29 | 113 |
MS.gene63483.t1 | MTR_7g071680 | 31.636 | 275 | 150 | 8 | 15 | 260 | 29 | 294 | 5.84e-28 | 109 |
MS.gene63483.t1 | MTR_4g058810 | 31.418 | 261 | 166 | 9 | 14 | 264 | 10 | 267 | 3.73e-27 | 106 |
MS.gene63483.t1 | MTR_4g058840 | 30.769 | 260 | 167 | 9 | 15 | 264 | 11 | 267 | 2.24e-25 | 101 |
MS.gene63483.t1 | MTR_4g058820 | 30.769 | 260 | 167 | 9 | 15 | 264 | 11 | 267 | 2.24e-25 | 101 |
MS.gene63483.t1 | MTR_7g083870 | 29.961 | 257 | 165 | 7 | 15 | 260 | 35 | 287 | 2.21e-24 | 99.8 |
MS.gene63483.t1 | MTR_1196s0010 | 32.114 | 246 | 154 | 6 | 18 | 259 | 277 | 513 | 2.85e-24 | 101 |
MS.gene63483.t1 | MTR_4g078630 | 29.771 | 262 | 159 | 7 | 15 | 260 | 19 | 271 | 1.87e-22 | 94.0 |
MS.gene63483.t1 | MTR_4g052350 | 31.034 | 261 | 168 | 9 | 15 | 269 | 14 | 268 | 8.50e-22 | 92.0 |
MS.gene63483.t1 | MTR_7g107670 | 28.352 | 261 | 171 | 7 | 11 | 260 | 29 | 284 | 1.05e-21 | 92.4 |
MS.gene63483.t1 | MTR_4g052340 | 29.963 | 267 | 156 | 9 | 15 | 265 | 14 | 265 | 1.10e-21 | 91.7 |
MS.gene63483.t1 | MTR_4g052320 | 29.297 | 256 | 171 | 7 | 15 | 264 | 8 | 259 | 1.73e-21 | 91.3 |
MS.gene63483.t1 | MTR_4g131740 | 31.203 | 266 | 153 | 8 | 15 | 262 | 40 | 293 | 5.65e-20 | 87.4 |
MS.gene63483.t1 | MTR_4g052300 | 30.651 | 261 | 160 | 9 | 15 | 264 | 8 | 258 | 8.56e-20 | 86.7 |
MS.gene63483.t1 | MTR_8g442750 | 27.344 | 256 | 171 | 6 | 15 | 259 | 14 | 265 | 1.77e-19 | 86.3 |
MS.gene63483.t1 | MTR_1g068955 | 30.000 | 260 | 165 | 9 | 15 | 263 | 14 | 267 | 3.39e-19 | 85.1 |
MS.gene63483.t1 | MTR_3g020670 | 30.000 | 260 | 163 | 9 | 15 | 260 | 16 | 270 | 4.48e-19 | 84.7 |
MS.gene63483.t1 | MTR_1g051165 | 27.652 | 264 | 173 | 12 | 15 | 263 | 14 | 274 | 1.16e-17 | 80.9 |
MS.gene63483.t1 | MTR_4g058830 | 32.558 | 172 | 109 | 6 | 98 | 264 | 44 | 213 | 1.64e-17 | 79.3 |
MS.gene63483.t1 | MTR_7g105590 | 29.570 | 186 | 124 | 4 | 15 | 197 | 8 | 189 | 2.48e-17 | 78.2 |
MS.gene63483.t1 | MTR_6g023990 | 27.675 | 271 | 171 | 11 | 1 | 259 | 5 | 262 | 9.85e-17 | 78.2 |
MS.gene63483.t1 | MTR_7g105580 | 25.954 | 262 | 170 | 5 | 8 | 265 | 1 | 242 | 1.04e-16 | 77.8 |
MS.gene63483.t1 | MTR_3g068075 | 74.000 | 50 | 12 | 1 | 123 | 171 | 1 | 50 | 1.04e-16 | 73.6 |
MS.gene63483.t1 | MTR_7g105460 | 28.137 | 263 | 177 | 6 | 6 | 261 | 4 | 261 | 2.58e-16 | 77.0 |
MS.gene63483.t1 | MTR_6g023610 | 28.358 | 268 | 170 | 10 | 5 | 259 | 3 | 261 | 4.52e-16 | 76.3 |
MS.gene63483.t1 | MTR_7g110140 | 30.888 | 259 | 165 | 9 | 11 | 261 | 2 | 254 | 6.14e-16 | 75.9 |
MS.gene63483.t1 | MTR_6g023590 | 26.740 | 273 | 168 | 11 | 5 | 259 | 3 | 261 | 6.33e-16 | 75.9 |
MS.gene63483.t1 | MTR_1g082760 | 28.682 | 258 | 171 | 7 | 15 | 263 | 40 | 293 | 6.69e-16 | 76.3 |
MS.gene63483.t1 | MTR_8g089575 | 31.313 | 198 | 127 | 5 | 17 | 207 | 47 | 242 | 1.53e-15 | 75.5 |
MS.gene63483.t1 | MTR_7g110130 | 27.170 | 265 | 168 | 8 | 11 | 261 | 2 | 255 | 3.04e-15 | 73.9 |
MS.gene63483.t1 | MTR_2g090165 | 27.586 | 261 | 171 | 8 | 11 | 261 | 2 | 254 | 5.94e-15 | 73.2 |
MS.gene63483.t1 | MTR_7g110160 | 28.846 | 260 | 151 | 8 | 11 | 261 | 2 | 236 | 2.71e-14 | 70.9 |
MS.gene63483.t1 | MTR_6g023600 | 27.473 | 273 | 166 | 10 | 5 | 259 | 3 | 261 | 3.37e-14 | 70.9 |
MS.gene63483.t1 | MTR_4g134660 | 32.948 | 173 | 107 | 4 | 18 | 184 | 9 | 178 | 1.05e-13 | 69.3 |
MS.gene63483.t1 | MTR_8g044240 | 28.821 | 229 | 144 | 8 | 15 | 229 | 69 | 292 | 2.53e-13 | 69.3 |
MS.gene63483.t1 | MTR_6g041980 | 32.515 | 163 | 91 | 5 | 11 | 168 | 60 | 208 | 5.27e-13 | 67.8 |
MS.gene63483.t1 | MTR_7g105570 | 29.050 | 179 | 110 | 4 | 94 | 261 | 46 | 218 | 8.82e-13 | 66.6 |
MS.gene63483.t1 | MTR_3g113870 | 26.667 | 180 | 126 | 3 | 28 | 205 | 34 | 209 | 1.76e-12 | 65.9 |
MS.gene63483.t1 | MTR_6g041980 | 32.515 | 163 | 91 | 5 | 11 | 168 | 60 | 208 | 1.82e-12 | 66.6 |
MS.gene63483.t1 | MTR_6g023600 | 27.106 | 273 | 161 | 10 | 5 | 259 | 3 | 255 | 6.23e-12 | 64.3 |
MS.gene63483.t1 | MTR_1275s0010 | 28.205 | 117 | 84 | 0 | 139 | 255 | 259 | 375 | 1.66e-11 | 64.3 |
MS.gene63483.t1 | MTR_3g087850 | 25.316 | 237 | 150 | 6 | 21 | 237 | 32 | 261 | 5.50e-11 | 62.0 |
MS.gene63483.t1 | MTR_3g098470 | 33.333 | 144 | 93 | 3 | 12 | 154 | 29 | 170 | 5.61e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63483.t1 | AT5G06060 | 70.155 | 258 | 77 | 0 | 12 | 269 | 6 | 263 | 7.51e-139 | 391 |
MS.gene63483.t1 | AT2G29260 | 63.241 | 253 | 93 | 0 | 12 | 264 | 65 | 317 | 1.68e-119 | 345 |
MS.gene63483.t1 | AT2G29360 | 61.303 | 261 | 101 | 0 | 5 | 265 | 6 | 266 | 7.90e-116 | 333 |
MS.gene63483.t1 | AT2G29290 | 60.630 | 254 | 100 | 0 | 12 | 265 | 4 | 257 | 1.63e-114 | 330 |
MS.gene63483.t1 | AT1G07450 | 60.078 | 258 | 102 | 1 | 8 | 265 | 1 | 257 | 2.25e-114 | 329 |
MS.gene63483.t1 | AT2G29150 | 61.303 | 261 | 100 | 1 | 5 | 265 | 6 | 265 | 3.08e-113 | 327 |
MS.gene63483.t1 | AT2G29350 | 61.961 | 255 | 96 | 1 | 11 | 265 | 11 | 264 | 6.35e-113 | 326 |
MS.gene63483.t1 | AT1G07440 | 59.843 | 254 | 101 | 1 | 12 | 265 | 9 | 261 | 3.76e-112 | 324 |
MS.gene63483.t1 | AT2G29330 | 60.392 | 255 | 99 | 2 | 12 | 265 | 4 | 257 | 2.05e-109 | 317 |
MS.gene63483.t1 | AT2G30670 | 58.661 | 254 | 105 | 0 | 12 | 265 | 4 | 257 | 1.52e-108 | 315 |
MS.gene63483.t1 | AT2G29370 | 56.391 | 266 | 115 | 1 | 1 | 265 | 1 | 266 | 3.25e-108 | 314 |
MS.gene63483.t1 | AT2G29340 | 57.087 | 254 | 109 | 0 | 12 | 265 | 4 | 257 | 9.97e-107 | 310 |
MS.gene63483.t1 | AT2G29340 | 57.087 | 254 | 109 | 0 | 12 | 265 | 4 | 257 | 4.20e-106 | 310 |
MS.gene63483.t1 | AT2G29310 | 57.874 | 254 | 107 | 0 | 12 | 265 | 4 | 257 | 1.44e-105 | 307 |
MS.gene63483.t1 | AT2G29320 | 56.757 | 259 | 111 | 1 | 8 | 265 | 6 | 264 | 3.88e-104 | 304 |
MS.gene63483.t1 | AT2G29290 | 59.402 | 234 | 95 | 0 | 32 | 265 | 7 | 240 | 8.52e-102 | 297 |
MS.gene63483.t1 | AT2G29300 | 55.686 | 255 | 112 | 1 | 12 | 265 | 4 | 258 | 2.86e-101 | 296 |
MS.gene63483.t1 | AT2G29300 | 55.200 | 250 | 111 | 1 | 12 | 260 | 4 | 253 | 1.23e-97 | 288 |
MS.gene63483.t1 | AT2G29350 | 60.619 | 226 | 88 | 1 | 40 | 265 | 2 | 226 | 9.71e-97 | 283 |
MS.gene63483.t1 | AT2G29320 | 56.780 | 236 | 101 | 1 | 31 | 265 | 11 | 246 | 4.38e-94 | 278 |
MS.gene63483.t1 | AT2G29310 | 57.021 | 235 | 101 | 0 | 31 | 265 | 21 | 255 | 4.86e-94 | 278 |
MS.gene63483.t1 | AT2G29350 | 63.402 | 194 | 71 | 0 | 11 | 204 | 11 | 204 | 1.36e-86 | 258 |
MS.gene63483.t1 | AT2G29310 | 57.576 | 198 | 84 | 0 | 12 | 209 | 4 | 201 | 2.61e-78 | 236 |
MS.gene63483.t1 | AT2G29340 | 55.556 | 198 | 88 | 0 | 12 | 209 | 4 | 201 | 1.53e-77 | 234 |
MS.gene63483.t1 | AT2G29340 | 55.556 | 198 | 88 | 0 | 12 | 209 | 4 | 201 | 1.53e-77 | 234 |
MS.gene63483.t1 | AT2G29320 | 55.838 | 197 | 86 | 1 | 8 | 203 | 6 | 202 | 7.41e-76 | 229 |
MS.gene63483.t1 | AT1G07440 | 60.248 | 161 | 64 | 0 | 12 | 172 | 9 | 169 | 1.83e-69 | 212 |
MS.gene63483.t1 | AT2G29310 | 56.425 | 179 | 78 | 0 | 31 | 209 | 21 | 199 | 1.67e-66 | 206 |
MS.gene63483.t1 | AT2G29170 | 58.824 | 102 | 41 | 1 | 1 | 101 | 1 | 102 | 9.35e-35 | 121 |
MS.gene63483.t1 | AT4G05530 | 34.818 | 247 | 154 | 7 | 15 | 259 | 9 | 250 | 8.57e-34 | 123 |
MS.gene63483.t1 | AT5G18210 | 33.585 | 265 | 157 | 9 | 8 | 259 | 1 | 259 | 1.43e-33 | 123 |
MS.gene63483.t1 | AT3G03980 | 33.457 | 269 | 160 | 9 | 6 | 259 | 5 | 269 | 7.20e-33 | 121 |
MS.gene63483.t1 | AT4G13180 | 33.210 | 271 | 163 | 10 | 1 | 261 | 1 | 263 | 3.49e-31 | 117 |
MS.gene63483.t1 | AT5G18210 | 33.456 | 272 | 148 | 11 | 8 | 266 | 1 | 252 | 4.34e-30 | 114 |
MS.gene63483.t1 | AT1G24360 | 30.769 | 247 | 158 | 8 | 21 | 261 | 80 | 319 | 2.89e-27 | 107 |
MS.gene63483.t1 | AT3G04000 | 32.210 | 267 | 165 | 8 | 6 | 258 | 5 | 269 | 1.45e-26 | 105 |
MS.gene63483.t1 | AT3G55310 | 29.787 | 282 | 180 | 13 | 1 | 267 | 1 | 279 | 3.69e-25 | 101 |
MS.gene63483.t1 | AT3G55290 | 30.483 | 269 | 165 | 12 | 15 | 267 | 17 | 279 | 1.29e-24 | 99.8 |
MS.gene63483.t1 | AT3G55290 | 30.483 | 269 | 165 | 12 | 15 | 267 | 18 | 280 | 1.51e-24 | 99.8 |
MS.gene63483.t1 | AT3G46170 | 29.457 | 258 | 171 | 8 | 15 | 263 | 26 | 281 | 3.62e-24 | 99.0 |
MS.gene63483.t1 | AT3G51680 | 29.643 | 280 | 173 | 8 | 1 | 260 | 20 | 295 | 7.53e-24 | 98.2 |
MS.gene63483.t1 | AT2G17845 | 29.389 | 262 | 171 | 7 | 15 | 264 | 47 | 306 | 2.50e-23 | 97.1 |
MS.gene63483.t1 | AT3G26760 | 28.244 | 262 | 165 | 7 | 15 | 260 | 36 | 290 | 3.07e-23 | 96.7 |
MS.gene63483.t1 | AT1G63380 | 28.369 | 282 | 185 | 11 | 1 | 267 | 1 | 280 | 6.90e-23 | 95.1 |
MS.gene63483.t1 | AT1G63380 | 28.947 | 266 | 174 | 9 | 15 | 267 | 19 | 282 | 7.82e-23 | 95.1 |
MS.gene63483.t1 | AT1G63380 | 28.947 | 266 | 174 | 9 | 15 | 267 | 15 | 278 | 9.45e-23 | 94.7 |
MS.gene63483.t1 | AT1G54870 | 32.576 | 264 | 153 | 8 | 15 | 263 | 82 | 335 | 1.15e-22 | 95.5 |
MS.gene63483.t1 | AT1G54870 | 32.576 | 264 | 153 | 8 | 15 | 263 | 84 | 337 | 1.23e-22 | 95.5 |
MS.gene63483.t1 | AT1G63380 | 28.571 | 259 | 173 | 8 | 15 | 263 | 22 | 278 | 1.34e-22 | 94.7 |
MS.gene63483.t1 | AT1G52340 | 30.682 | 264 | 159 | 8 | 15 | 260 | 18 | 275 | 2.61e-22 | 94.0 |
MS.gene63483.t1 | AT2G47130 | 30.651 | 261 | 166 | 9 | 8 | 261 | 1 | 253 | 3.57e-22 | 92.8 |
MS.gene63483.t1 | AT1G62610 | 27.413 | 259 | 176 | 8 | 15 | 263 | 13 | 269 | 5.04e-22 | 92.8 |
MS.gene63483.t1 | AT1G62610 | 27.820 | 266 | 177 | 9 | 15 | 267 | 15 | 278 | 5.21e-22 | 92.8 |
MS.gene63483.t1 | AT1G62610 | 27.820 | 266 | 177 | 9 | 15 | 267 | 14 | 277 | 5.79e-22 | 92.8 |
MS.gene63483.t1 | AT1G62610 | 27.820 | 266 | 177 | 9 | 15 | 267 | 19 | 282 | 6.03e-22 | 92.8 |
MS.gene63483.t1 | AT2G47120 | 29.008 | 262 | 168 | 10 | 8 | 261 | 1 | 252 | 2.45e-20 | 87.8 |
MS.gene63483.t1 | AT3G05260 | 32.685 | 257 | 159 | 7 | 15 | 262 | 37 | 288 | 5.09e-20 | 87.8 |
MS.gene63483.t1 | AT2G47120 | 28.627 | 255 | 166 | 9 | 15 | 261 | 7 | 253 | 6.70e-20 | 86.7 |
MS.gene63483.t1 | AT3G42960 | 30.116 | 259 | 157 | 9 | 18 | 260 | 11 | 261 | 3.34e-19 | 85.1 |
MS.gene63483.t1 | AT4G03140 | 26.996 | 263 | 164 | 7 | 15 | 260 | 78 | 329 | 3.44e-19 | 86.3 |
MS.gene63483.t1 | AT3G12800 | 25.000 | 256 | 178 | 5 | 15 | 259 | 10 | 262 | 4.81e-19 | 85.1 |
MS.gene63483.t1 | AT3G29260 | 29.771 | 262 | 167 | 9 | 8 | 261 | 1 | 253 | 1.60e-17 | 80.1 |
MS.gene63483.t1 | AT3G26770 | 26.966 | 267 | 174 | 7 | 15 | 267 | 41 | 300 | 5.57e-17 | 79.3 |
MS.gene63483.t1 | AT2G47140 | 28.897 | 263 | 169 | 11 | 8 | 261 | 1 | 254 | 2.65e-16 | 76.6 |
MS.gene63483.t1 | AT3G29250 | 28.517 | 263 | 174 | 8 | 7 | 261 | 36 | 292 | 4.99e-16 | 76.6 |
MS.gene63483.t1 | AT3G29250 | 28.626 | 262 | 171 | 9 | 8 | 261 | 1 | 254 | 8.03e-15 | 72.8 |
MS.gene63483.t1 | AT5G04900 | 30.493 | 223 | 135 | 9 | 21 | 229 | 83 | 299 | 9.20e-15 | 73.6 |
MS.gene63483.t1 | AT3G29250 | 28.517 | 263 | 172 | 9 | 7 | 261 | 36 | 290 | 1.04e-14 | 72.8 |
MS.gene63483.t1 | AT4G13250 | 26.641 | 259 | 151 | 8 | 18 | 243 | 162 | 414 | 4.02e-14 | 72.4 |
MS.gene63483.t1 | AT1G10310 | 32.143 | 168 | 111 | 3 | 18 | 184 | 18 | 183 | 4.51e-14 | 70.5 |
MS.gene63483.t1 | AT3G47350 | 29.534 | 193 | 125 | 6 | 17 | 204 | 46 | 232 | 5.47e-14 | 71.2 |
MS.gene63483.t1 | AT3G47350 | 29.534 | 193 | 125 | 6 | 17 | 204 | 46 | 232 | 7.23e-14 | 70.5 |
MS.gene63483.t1 | AT1G24470 | 28.079 | 203 | 137 | 6 | 17 | 213 | 52 | 251 | 9.49e-14 | 70.5 |
MS.gene63483.t1 | AT3G03330 | 29.016 | 193 | 128 | 5 | 12 | 197 | 38 | 228 | 4.80e-13 | 68.6 |
MS.gene63483.t1 | AT5G65205 | 29.444 | 180 | 116 | 6 | 21 | 197 | 12 | 183 | 7.94e-13 | 67.4 |
MS.gene63483.t1 | AT5G10050 | 26.702 | 191 | 133 | 3 | 21 | 210 | 11 | 195 | 1.49e-12 | 66.6 |
MS.gene63483.t1 | AT3G06060 | 26.733 | 202 | 141 | 2 | 9 | 207 | 31 | 228 | 3.74e-12 | 65.9 |
MS.gene63483.t1 | AT4G09750 | 33.544 | 158 | 86 | 5 | 15 | 167 | 41 | 184 | 4.02e-12 | 65.9 |
MS.gene63483.t1 | AT3G06060 | 26.733 | 202 | 141 | 2 | 9 | 207 | 48 | 245 | 4.46e-12 | 65.9 |
MS.gene63483.t1 | AT1G49670 | 29.439 | 214 | 124 | 7 | 17 | 211 | 6 | 211 | 8.93e-12 | 65.5 |
MS.gene63483.t1 | AT1G49670 | 29.439 | 214 | 124 | 7 | 17 | 211 | 6 | 211 | 9.49e-12 | 65.5 |
MS.gene63483.t1 | AT3G47360 | 30.208 | 192 | 123 | 6 | 18 | 204 | 48 | 233 | 1.35e-11 | 63.9 |
MS.gene63483.t1 | AT1G67730 | 27.638 | 199 | 131 | 7 | 17 | 206 | 51 | 245 | 1.96e-11 | 63.5 |
MS.gene63483.t1 | AT4G20760 | 30.317 | 221 | 124 | 9 | 16 | 211 | 62 | 277 | 5.14e-11 | 62.4 |
MS.gene63483.t1 | AT4G20760 | 30.317 | 221 | 124 | 9 | 16 | 211 | 42 | 257 | 5.50e-11 | 62.4 |
Find 47 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCCTCTTCTTAAAGAATC+TGG | 0.311673 | 3.1:-56373126 | MS.gene63483:CDS |
AATGGGCAAAAGACAATATA+AGG | 0.317797 | 3.1:-56372889 | MS.gene63483:CDS |
GTTTCTGCTATACGCTTTAT+CGG | 0.318496 | 3.1:+56372357 | None:intergenic |
TGCCTCTCATGCTGCTCTCT+TGG | 0.339487 | 3.1:+56375426 | None:intergenic |
GGAAAGTCTGCTCTAGTTAC+TGG | 0.355585 | 3.1:-56375386 | MS.gene63483:CDS |
GGACAAACTGTTTCTGTTGA+TGG | 0.363679 | 3.1:-56372276 | MS.gene63483:CDS |
CTTCTTAAAGAATCTGGAAA+TGG | 0.409640 | 3.1:-56373120 | MS.gene63483:CDS |
TCGGCTGTATACTCAATTGT+TGG | 0.433889 | 3.1:+56373210 | None:intergenic |
ACTCACTGCATAGATGCTTC+CGG | 0.439791 | 3.1:+56373050 | None:intergenic |
TGCATTCCATCTATGTCAAC+TGG | 0.450264 | 3.1:-56373151 | MS.gene63483:CDS |
GATGGAGGATTTACTGTGAA+TGG | 0.451398 | 3.1:-56372258 | MS.gene63483:CDS |
AAAAGTGATGACTACTAACT+TGG | 0.463013 | 3.1:-56373178 | MS.gene63483:CDS |
ACTGGTGGAACTCGTGGAAT+CGG | 0.476543 | 3.1:-56375368 | MS.gene63483:CDS |
GTGGAGGAACTAGCTGAGTT+TGG | 0.479590 | 3.1:-56375335 | MS.gene63483:CDS |
TTTCCAGATTCTTTAAGAAG+AGG | 0.503369 | 3.1:+56373123 | None:intergenic |
AACCAAGAGAGCAGCATGAG+AGG | 0.505029 | 3.1:-56375428 | MS.gene63483:CDS |
CCAGCTGCTTCCTACATCAC+TGG | 0.520639 | 3.1:-56372297 | MS.gene63483:CDS |
CAAGTTGCTTCTGCTTTCAA+CGG | 0.524543 | 3.1:-56375176 | MS.gene63483:CDS |
CTTAAATGAGTGGAAAGAGA+AGG | 0.530669 | 3.1:-56375264 | MS.gene63483:CDS |
AGCATCTATGCAGTGAGTAA+AGG | 0.540433 | 3.1:-56373045 | MS.gene63483:intron |
CTAGTTACTGGTGGAACTCG+TGG | 0.541240 | 3.1:-56375374 | MS.gene63483:CDS |
AGCTATTAGGTAAACAATGC+TGG | 0.541729 | 3.1:-56373249 | MS.gene63483:intron |
TTAAATGAGTGGAAAGAGAA+GGG | 0.543808 | 3.1:-56375263 | MS.gene63483:CDS |
AACAGTTTGTCCAGTGATGT+AGG | 0.560729 | 3.1:+56372287 | None:intergenic |
AGGCACAAGATGGTCTCTCA+AGG | 0.570614 | 3.1:-56375408 | MS.gene63483:CDS |
GATGTGCCAGTTGACATAGA+TGG | 0.576163 | 3.1:+56373145 | None:intergenic |
CCACAGTGTACACTTGCTCT+AGG | 0.579593 | 3.1:-56375310 | MS.gene63483:CDS |
AATCGGTCATGCTGTGGTGG+AGG | 0.580717 | 3.1:-56375351 | MS.gene63483:CDS |
ATAAGCTCCTCTCTTTGAGA+AGG | 0.588037 | 3.1:+56375203 | None:intergenic |
CCAGTGATGTAGGAAGCAGC+TGG | 0.588298 | 3.1:+56372297 | None:intergenic |
ATCTTCTCCTTCTCAAAGAG+AGG | 0.595566 | 3.1:-56375210 | MS.gene63483:CDS |
GCAGCATGAGAGGCACAAGA+TGG | 0.597950 | 3.1:-56375418 | MS.gene63483:CDS |
TCTCTGATAAGCGTAGGTAC+CGG | 0.606028 | 3.1:-56373069 | MS.gene63483:CDS |
AACACATGAAGTGTCTGCCT+TGG | 0.606041 | 3.1:-56372337 | MS.gene63483:CDS |
TGGAATCGGTCATGCTGTGG+TGG | 0.606109 | 3.1:-56375354 | MS.gene63483:CDS |
CAAACTGTTTCTGTTGATGG+AGG | 0.607479 | 3.1:-56372273 | MS.gene63483:CDS |
AAGTCTGCTCTAGTTACTGG+TGG | 0.609393 | 3.1:-56375383 | MS.gene63483:CDS |
AGGAAGCAGCTGGCAGACAA+AGG | 0.611292 | 3.1:+56372307 | None:intergenic |
TGAGCAAATGCTTAAATGAG+TGG | 0.614861 | 3.1:-56375274 | MS.gene63483:CDS |
GTTGCATCTCTGATAAGCGT+AGG | 0.625038 | 3.1:-56373075 | MS.gene63483:CDS |
GGAGCAACTGTGTTGCACCC+TGG | 0.628385 | 3.1:-56372868 | MS.gene63483:CDS |
TCGTGGAATCGGTCATGCTG+TGG | 0.634799 | 3.1:-56375357 | MS.gene63483:CDS |
GGCACAAGATGGTCTCTCAA+GGG | 0.644640 | 3.1:-56375407 | MS.gene63483:CDS |
ACAATGCTGGTACAAATGTG+AGG | 0.662281 | 3.1:-56373236 | MS.gene63483:CDS |
GCTTATCAGAGATGCAACAG+AGG | 0.677312 | 3.1:+56373080 | None:intergenic |
CAGACAAAGGAAAGTCACCA+AGG | 0.716868 | 3.1:+56372320 | None:intergenic |
CCTAGAGCAAGTGTACACTG+TGG | 0.805980 | 3.1:+56375310 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTACAATATTATATAACT+AGG | + | chr3.1:56373686-56373705 | None:intergenic | 10.0% |
!!! | AGTAATATTAAATTAGCTTA+GGG | + | chr3.1:56373003-56373022 | None:intergenic | 15.0% |
!!! | TCATTTTTTGTTAAATTCAT+TGG | - | chr3.1:56373722-56373741 | MS.gene63483:intron | 15.0% |
!! | ACATCAACATAATATAGAAA+CGG | + | chr3.1:56372568-56372587 | None:intergenic | 20.0% |
!! | GAAAACGAAATATATAGAAA+AGG | + | chr3.1:56372546-56372565 | None:intergenic | 20.0% |
!! | TGAAAAGAAAAAAAAAACCT+CGG | + | chr3.1:56373398-56373417 | None:intergenic | 20.0% |
!! | TTCATAAAGAAAAAATGACA+AGG | + | chr3.1:56374894-56374913 | None:intergenic | 20.0% |
!!! | AAATCTATTCATTTTACAAG+AGG | - | chr3.1:56373938-56373957 | MS.gene63483:intron | 20.0% |
!!! | CAGTAATATTAAATTAGCTT+AGG | + | chr3.1:56373004-56373023 | None:intergenic | 20.0% |
!!! | GTAATATTAAATTAGCTTAG+GGG | + | chr3.1:56373002-56373021 | None:intergenic | 20.0% |
!!! | TACTATTTTATTTTTTCACC+AGG | + | chr3.1:56374075-56374094 | None:intergenic | 20.0% |
!!! | TTTGTTGATGAATTTGATTT+TGG | - | chr3.1:56373293-56373312 | MS.gene63483:intron | 20.0% |
! | AAAATCTTCTAGCAATTTGA+GGG | + | chr3.1:56373424-56373443 | None:intergenic | 25.0% |
! | AACAAATCTACAATTGACAA+TGG | + | chr3.1:56373833-56373852 | None:intergenic | 25.0% |
! | AACCCTAATCAAAACAAAAA+GGG | - | chr3.1:56373344-56373363 | MS.gene63483:intron | 25.0% |
! | ATAGTAGAAGTTATAGAAGA+AGG | - | chr3.1:56374089-56374108 | MS.gene63483:intron | 25.0% |
! | ATCTGTAGTATTAATCCAAA+TGG | - | chr3.1:56375196-56375215 | MS.gene63483:CDS | 25.0% |
! | CTAATGCATTATAACTCTAA+CGG | - | chr3.1:56372904-56372923 | MS.gene63483:CDS | 25.0% |
! | GCTAATGTACTTAAATTTCA+TGG | + | chr3.1:56373806-56373825 | None:intergenic | 25.0% |
! | TAACCCTAATCAAAACAAAA+AGG | - | chr3.1:56373343-56373362 | MS.gene63483:intron | 25.0% |
! | TAGAACTAAATTGCAATGTA+CGG | + | chr3.1:56373609-56373628 | None:intergenic | 25.0% |
! | TATTATGTTCAGAACTTATG+TGG | - | chr3.1:56375222-56375241 | MS.gene63483:CDS | 25.0% |
! | TGTGCTAGTTGAAAATAATT+TGG | + | chr3.1:56372736-56372755 | None:intergenic | 25.0% |
!! | AGTCTTTTCACAGAATAAAT+GGG | + | chr3.1:56372973-56372992 | None:intergenic | 25.0% |
!! | CTTGTTATAAGACTTTCTTA+TGG | - | chr3.1:56374297-56374316 | MS.gene63483:intron | 25.0% |
!! | TAGTCTTTTCACAGAATAAA+TGG | + | chr3.1:56372974-56372993 | None:intergenic | 25.0% |
!! | TGATTTGTATGTTTGTCTTA+AGG | - | chr3.1:56372778-56372797 | MS.gene63483:intron | 25.0% |
!!! | ATGTTTTAAGATTTTCTTCC+TGG | - | chr3.1:56374054-56374073 | MS.gene63483:intron | 25.0% |
!!! | CATCACTTTTGAATAATCTT+CGG | + | chr3.1:56374482-56374501 | None:intergenic | 25.0% |
!!! | GATGAATTTGATTTTGGTTT+TGG | - | chr3.1:56373299-56373318 | MS.gene63483:intron | 25.0% |
!!! | TTTGTTTTGATTAGGGTTAT+GGG | + | chr3.1:56373342-56373361 | None:intergenic | 25.0% |
!!! | TTTTGTTTTGATTAGGGTTA+TGG | + | chr3.1:56373343-56373362 | None:intergenic | 25.0% |
AAAAAGTCTTGCTTGTGAAT+GGG | - | chr3.1:56374764-56374783 | MS.gene63483:intron | 30.0% | |
AAAAGTGATGACTACTAACT+TGG | - | chr3.1:56374492-56374511 | MS.gene63483:intron | 30.0% | |
AACCGAAATCATGTATTAGT+AGG | - | chr3.1:56375053-56375072 | MS.gene63483:intron | 30.0% | |
AATGGGCAAAAGACAATATA+AGG | - | chr3.1:56374781-56374800 | MS.gene63483:intron | 30.0% | |
ACCCTAATCAAAACAAAAAG+GGG | - | chr3.1:56373345-56373364 | MS.gene63483:intron | 30.0% | |
ACCTTTAATTATCCATTCTC+TGG | - | chr3.1:56374868-56374887 | MS.gene63483:intron | 30.0% | |
AGAGATACACTTAGAATTGT+AGG | + | chr3.1:56373247-56373266 | None:intergenic | 30.0% | |
AGCCTACTAATACATGATTT+CGG | + | chr3.1:56375058-56375077 | None:intergenic | 30.0% | |
ATCCTGACAAATCTTTCTAA+TGG | - | chr3.1:56373571-56373590 | MS.gene63483:intron | 30.0% | |
ATGACCAATGATATTGATGT+CGG | - | chr3.1:56373961-56373980 | MS.gene63483:intron | 30.0% | |
CAAAATCTTCTAGCAATTTG+AGG | + | chr3.1:56373425-56373444 | None:intergenic | 30.0% | |
CAGCAAAAATTAAAATGCAG+AGG | + | chr3.1:56375137-56375156 | None:intergenic | 30.0% | |
CTGAACATAATATTGCCATT+TGG | + | chr3.1:56375214-56375233 | None:intergenic | 30.0% | |
CTTATAACAACCTTAGCATA+GGG | + | chr3.1:56374156-56374175 | None:intergenic | 30.0% | |
CTTCTTAAAGAATCTGGAAA+TGG | - | chr3.1:56374550-56374569 | MS.gene63483:intron | 30.0% | |
GAAAAAAAAAACCTCGGTAA+TGG | + | chr3.1:56373392-56373411 | None:intergenic | 30.0% | |
GAGATACACTTAGAATTGTA+GGG | + | chr3.1:56373246-56373265 | None:intergenic | 30.0% | |
TCCTGACAAATCTTTCTAAT+GGG | - | chr3.1:56373572-56373591 | MS.gene63483:intron | 30.0% | |
TGATAATCTTGTGAGCTATT+AGG | - | chr3.1:56374408-56374427 | MS.gene63483:intron | 30.0% | |
TTAAATGAGTGGAAAGAGAA+GGG | - | chr3.1:56372407-56372426 | MS.gene63483:intron | 30.0% | |
TTAGCAATAAACTGCAAGAA+AGG | + | chr3.1:56375259-56375278 | None:intergenic | 30.0% | |
! | ATTGAGAAGCATAATGATGT+TGG | - | chr3.1:56373761-56373780 | MS.gene63483:intron | 30.0% |
! | TGCATTCTTTTGATGTACTT+TGG | - | chr3.1:56374274-56374293 | MS.gene63483:intron | 30.0% |
! | TTTCCAGATTCTTTAAGAAG+AGG | + | chr3.1:56374550-56374569 | None:intergenic | 30.0% |
! | TTTTCACAGAATAAATGGGT+AGG | + | chr3.1:56372969-56372988 | None:intergenic | 30.0% |
!! | ATCTTGACTTTTCTGTTTCT+AGG | + | chr3.1:56373907-56373926 | None:intergenic | 30.0% |
!! | TTACTGTGAATGGATTTTCT+GGG | - | chr3.1:56375422-56375441 | MS.gene63483:CDS | 30.0% |
!! | TTTACTGTGAATGGATTTTC+TGG | - | chr3.1:56375421-56375440 | MS.gene63483:CDS | 30.0% |
!!! | ATCCCCTTTTTGTTTTGATT+AGG | + | chr3.1:56373350-56373369 | None:intergenic | 30.0% |
!!! | GAGAAGGGTTTTTTTGTTTA+TGG | - | chr3.1:56372422-56372441 | MS.gene63483:intron | 30.0% |
!!! | GGGTTTTTTTGTTTATGGAT+CGG | - | chr3.1:56372427-56372446 | MS.gene63483:intron | 30.0% |
!!! | TCCCCTTTTTGTTTTGATTA+GGG | + | chr3.1:56373349-56373368 | None:intergenic | 30.0% |
AAATCAAGTGCGTGTAAGAT+TGG | + | chr3.1:56374223-56374242 | None:intergenic | 35.0% | |
AATCAATTTGTAGATGCTCG+TGG | - | chr3.1:56372673-56372692 | MS.gene63483:intron | 35.0% | |
AATCCGAGTCTATTCTTCAT+TGG | - | chr3.1:56373202-56373221 | MS.gene63483:CDS | 35.0% | |
ACCCATTAGAAAGATTTGTC+AGG | + | chr3.1:56373576-56373595 | None:intergenic | 35.0% | |
AGACCAATGAAGAATAGACT+CGG | + | chr3.1:56373208-56373227 | None:intergenic | 35.0% | |
AGATTTGTCAGGATTGCATA+AGG | + | chr3.1:56373565-56373584 | None:intergenic | 35.0% | |
AGCTATTAGGTAAACAATGC+TGG | - | chr3.1:56374421-56374440 | MS.gene63483:intron | 35.0% | |
ATTATAACTCTAACGGTCAG+TGG | - | chr3.1:56372911-56372930 | MS.gene63483:CDS | 35.0% | |
CAAAAAGTCTTGCTTGTGAA+TGG | - | chr3.1:56374763-56374782 | MS.gene63483:intron | 35.0% | |
CATCCTCTTCTTAAAGAATC+TGG | - | chr3.1:56374544-56374563 | MS.gene63483:intron | 35.0% | |
CCTATGCTAAGGTTGTTATA+AGG | - | chr3.1:56374154-56374173 | MS.gene63483:intron | 35.0% | |
CCTTATAACAACCTTAGCAT+AGG | + | chr3.1:56374157-56374176 | None:intergenic | 35.0% | |
CTTAAATGAGTGGAAAGAGA+AGG | - | chr3.1:56372406-56372425 | MS.gene63483:intron | 35.0% | |
GCCAGAGAATGGATAATTAA+AGG | + | chr3.1:56374872-56374891 | None:intergenic | 35.0% | |
GTATTATTGAATCGCAACGT+AGG | + | chr3.1:56374948-56374967 | None:intergenic | 35.0% | |
GTTTCTGCTATACGCTTTAT+CGG | + | chr3.1:56375316-56375335 | None:intergenic | 35.0% | |
TACCAGAAACAAGACGAAAA+AGG | + | chr3.1:56374351-56374370 | None:intergenic | 35.0% | |
TGAGCAAATGCTTAAATGAG+TGG | - | chr3.1:56372396-56372415 | MS.gene63483:CDS | 35.0% | |
TTGCATAAGGAAACAAACTC+AGG | + | chr3.1:56373552-56373571 | None:intergenic | 35.0% | |
! | GATGTTGAATTTTGCATAGC+TGG | - | chr3.1:56372589-56372608 | MS.gene63483:intron | 35.0% |
!! | TAAAATGCAGAGGCATCATA+TGG | + | chr3.1:56375127-56375146 | None:intergenic | 35.0% |
!! | TTTCGTTGTAGTCTTGTAGA+AGG | - | chr3.1:56373489-56373508 | MS.gene63483:intron | 35.0% |
!!! | AGTTCACTTTTTGAGTGTGT+TGG | - | chr3.1:56372873-56372892 | MS.gene63483:CDS | 35.0% |
AAAATGACAAGGCCAGAGAA+TGG | + | chr3.1:56374883-56374902 | None:intergenic | 40.0% | |
AACAGTTTGTCCAGTGATGT+AGG | + | chr3.1:56375386-56375405 | None:intergenic | 40.0% | |
ACAATGCTGGTACAAATGTG+AGG | - | chr3.1:56374434-56374453 | MS.gene63483:intron | 40.0% | |
AGCATCTATGCAGTGAGTAA+AGG | - | chr3.1:56374625-56374644 | MS.gene63483:intron | 40.0% | |
ATCTTCTCCTTCTCAAAGAG+AGG | - | chr3.1:56372460-56372479 | MS.gene63483:intron | 40.0% | |
ATGCATACGAAACACGATCA+TGG | - | chr3.1:56374994-56375013 | MS.gene63483:intron | 40.0% | |
ATGCTCGTGGAAAACTTAGT+TGG | - | chr3.1:56372686-56372705 | MS.gene63483:intron | 40.0% | |
ATGGCCGACATCAATATCAT+TGG | + | chr3.1:56373968-56373987 | None:intergenic | 40.0% | |
CAAGTTGCTTCTGCTTTCAA+CGG | - | chr3.1:56372494-56372513 | MS.gene63483:intron | 40.0% | |
CCAGACAAAAATGTTTGGGA+TGG | + | chr3.1:56373987-56374006 | None:intergenic | 40.0% | |
GAGAAAATACACTTCAGCTC+TGG | + | chr3.1:56373078-56373097 | None:intergenic | 40.0% | |
GATGGAGGATTTACTGTGAA+TGG | - | chr3.1:56375412-56375431 | MS.gene63483:CDS | 40.0% | |
GGAGCCAGACAAAAATGTTT+GGG | + | chr3.1:56373991-56374010 | None:intergenic | 40.0% | |
GTATACAAAAACGTCGCTTG+TGG | - | chr3.1:56374824-56374843 | MS.gene63483:intron | 40.0% | |
TCGGCTGTATACTCAATTGT+TGG | + | chr3.1:56374463-56374482 | None:intergenic | 40.0% | |
TGAAGAATAGACTCGGATTC+TGG | + | chr3.1:56373201-56373220 | None:intergenic | 40.0% | |
TGATTTCGGTTGCATGAATC+AGG | + | chr3.1:56375044-56375063 | None:intergenic | 40.0% | |
TGCAGTGAGTAAAGGTAACT+TGG | - | chr3.1:56374633-56374652 | MS.gene63483:intron | 40.0% | |
TGCATACGAAACACGATCAT+GGG | - | chr3.1:56374995-56375014 | MS.gene63483:intron | 40.0% | |
TGCATTCCATCTATGTCAAC+TGG | - | chr3.1:56374519-56374538 | MS.gene63483:intron | 40.0% | |
! | AAGCGACGTTTTTGTATACC+AGG | + | chr3.1:56374823-56374842 | None:intergenic | 40.0% |
! | AGCGACGTTTTTGTATACCA+GGG | + | chr3.1:56374822-56374841 | None:intergenic | 40.0% |
! | ATAAGCTCCTCTCTTTGAGA+AGG | + | chr3.1:56372470-56372489 | None:intergenic | 40.0% |
! | CCATCCCAAACATTTTTGTC+TGG | - | chr3.1:56373984-56374003 | MS.gene63483:intron | 40.0% |
!! | ACACGCACTTGATTTTCAAG+TGG | - | chr3.1:56374228-56374247 | MS.gene63483:intron | 40.0% |
!! | CAAACTGTTTCTGTTGATGG+AGG | - | chr3.1:56375397-56375416 | MS.gene63483:CDS | 40.0% |
!! | GGACAAACTGTTTCTGTTGA+TGG | - | chr3.1:56375394-56375413 | MS.gene63483:CDS | 40.0% |
!! | TTTGATTTGAGCCATTACCG+AGG | - | chr3.1:56373378-56373397 | MS.gene63483:intron | 40.0% |
!!! | CACCTTTTTCGTCTTGTTTC+TGG | - | chr3.1:56374346-56374365 | MS.gene63483:intron | 40.0% |
AAAAACGTCGCTTGTGGAAC+AGG | - | chr3.1:56374830-56374849 | MS.gene63483:intron | 45.0% | |
AAGTCTGCTCTAGTTACTGG+TGG | - | chr3.1:56372287-56372306 | MS.gene63483:CDS | 45.0% | |
ACTCACTGCATAGATGCTTC+CGG | + | chr3.1:56374623-56374642 | None:intergenic | 45.0% | |
AGATGCTCACACTGACACTA+CGG | + | chr3.1:56375180-56375199 | None:intergenic | 45.0% | |
AGGAAACAAACTCAGGAGTC+AGG | + | chr3.1:56373545-56373564 | None:intergenic | 45.0% | |
AGTGCGTGTAAGATTGGTGA+CGG | + | chr3.1:56374217-56374236 | None:intergenic | 45.0% | |
ATAACTCTAACGGTCAGTGG+CGG | - | chr3.1:56372914-56372933 | MS.gene63483:CDS | 45.0% | |
CAGAATAAATGGGTAGGCCA+TGG | + | chr3.1:56372963-56372982 | None:intergenic | 45.0% | |
CAGACAAAGGAAAGTCACCA+AGG | + | chr3.1:56375353-56375372 | None:intergenic | 45.0% | |
CGGAGCCAGACAAAAATGTT+TGG | + | chr3.1:56373992-56374011 | None:intergenic | 45.0% | |
GATGCAGATAGAAGAGATGC+CGG | + | chr3.1:56373173-56373192 | None:intergenic | 45.0% | |
GATGTGCCAGTTGACATAGA+TGG | + | chr3.1:56374528-56374547 | None:intergenic | 45.0% | |
GCTTATCAGAGATGCAACAG+AGG | + | chr3.1:56374593-56374612 | None:intergenic | 45.0% | |
GGAAAGTCTGCTCTAGTTAC+TGG | - | chr3.1:56372284-56372303 | MS.gene63483:CDS | 45.0% | |
GTTGCATCTCTGATAAGCGT+AGG | - | chr3.1:56374595-56374614 | MS.gene63483:intron | 45.0% | |
TCGTGAGTGATGTTGTGCAA+GGG | + | chr3.1:56373105-56373124 | None:intergenic | 45.0% | |
TCTCTGATAAGCGTAGGTAC+CGG | - | chr3.1:56374601-56374620 | MS.gene63483:intron | 45.0% | |
! | AACACATGAAGTGTCTGCCT+TGG | - | chr3.1:56375333-56375352 | MS.gene63483:CDS | 45.0% |
!! | AATGCAGAGGCATCATATGG+TGG | + | chr3.1:56375124-56375143 | None:intergenic | 45.0% |
AACCAAGAGAGCAGCATGAG+AGG | - | chr3.1:56372242-56372261 | MS.gene63483:CDS | 50.0% | |
AACTACCCCACTCTCAGAAC+GGG | - | chr3.1:56373035-56373054 | MS.gene63483:intron | 50.0% | |
ACTGGTGGAACTCGTGGAAT+CGG | - | chr3.1:56372302-56372321 | MS.gene63483:CDS | 50.0% | |
ACTGTGTGTGTGTGTGTGTG+AGG | + | chr3.1:56374123-56374142 | None:intergenic | 50.0% | |
AGGCACAAGATGGTCTCTCA+AGG | - | chr3.1:56372262-56372281 | MS.gene63483:CDS | 50.0% | |
CAACTACCCCACTCTCAGAA+CGG | - | chr3.1:56373034-56373053 | MS.gene63483:intron | 50.0% | |
CCACAGTGTACACTTGCTCT+AGG | - | chr3.1:56372360-56372379 | MS.gene63483:CDS | 50.0% | |
CCTAGAGCAAGTGTACACTG+TGG | + | chr3.1:56372363-56372382 | None:intergenic | 50.0% | |
CGATGAAACACCGTTAGCAG+TGG | + | chr3.1:56374015-56374034 | None:intergenic | 50.0% | |
CTAGTTACTGGTGGAACTCG+TGG | - | chr3.1:56372296-56372315 | MS.gene63483:CDS | 50.0% | |
GAGAGCTTGTCCCTATGCTA+AGG | - | chr3.1:56374143-56374162 | MS.gene63483:intron | 50.0% | |
GGCACAAGATGGTCTCTCAA+GGG | - | chr3.1:56372263-56372282 | MS.gene63483:CDS | 50.0% | |
GTCGTGAGTGATGTTGTGCA+AGG | + | chr3.1:56373106-56373125 | None:intergenic | 50.0% | |
GTGGAGGAACTAGCTGAGTT+TGG | - | chr3.1:56372335-56372354 | MS.gene63483:CDS | 50.0% | |
TGAAACACCGTTAGCAGTGG+CGG | + | chr3.1:56374012-56374031 | None:intergenic | 50.0% | |
AATCGGTCATGCTGTGGTGG+AGG | - | chr3.1:56372319-56372338 | MS.gene63483:CDS | 55.0% | |
AGGAAGCAGCTGGCAGACAA+AGG | + | chr3.1:56375366-56375385 | None:intergenic | 55.0% | |
AGTGGGGTAGTTGAGTGGCA+TGG | + | chr3.1:56373027-56373046 | None:intergenic | 55.0% | |
CCAGCTGCTTCCTACATCAC+TGG | - | chr3.1:56375373-56375392 | MS.gene63483:CDS | 55.0% | |
CCAGTGATGTAGGAAGCAGC+TGG | + | chr3.1:56375376-56375395 | None:intergenic | 55.0% | |
CCCACTCTCAGAACGGGAAA+GGG | - | chr3.1:56373041-56373060 | MS.gene63483:intron | 55.0% | |
CTGAGAGTGGGGTAGTTGAG+TGG | + | chr3.1:56373032-56373051 | None:intergenic | 55.0% | |
CTGCTTACTCCACCTAGCGA+GGG | - | chr3.1:56374177-56374196 | MS.gene63483:intron | 55.0% | |
GAAACACGATCATGGGCTCG+TGG | - | chr3.1:56375002-56375021 | MS.gene63483:intron | 55.0% | |
GCAGATAGAAGAGATGCCGG+TGG | + | chr3.1:56373170-56373189 | None:intergenic | 55.0% | |
TCGTGGAATCGGTCATGCTG+TGG | - | chr3.1:56372313-56372332 | MS.gene63483:CDS | 55.0% | |
TGCCTCTCATGCTGCTCTCT+TGG | + | chr3.1:56372247-56372266 | None:intergenic | 55.0% | |
TGGAATCGGTCATGCTGTGG+TGG | - | chr3.1:56372316-56372335 | MS.gene63483:CDS | 55.0% | |
! | GCAGCATGAGAGGCACAAGA+TGG | - | chr3.1:56372252-56372271 | MS.gene63483:CDS | 55.0% |
!! | CCCTTTCCCGTTCTGAGAGT+GGG | + | chr3.1:56373044-56373063 | None:intergenic | 55.0% |
!! | CCTTTCCCGTTCTGAGAGTG+GGG | + | chr3.1:56373043-56373062 | None:intergenic | 55.0% |
!! | TCCCTTTCCCGTTCTGAGAG+TGG | + | chr3.1:56373045-56373064 | None:intergenic | 55.0% |
ATGCCGGTGGATGAGTTCGC+CGG | + | chr3.1:56373157-56373176 | None:intergenic | 60.0% | |
CCCCACTCTCAGAACGGGAA+AGG | - | chr3.1:56373040-56373059 | MS.gene63483:intron | 60.0% | |
GCTGCTTACTCCACCTAGCG+AGG | - | chr3.1:56374176-56374195 | MS.gene63483:intron | 60.0% | |
GGAGCAACTGTGTTGCACCC+TGG | - | chr3.1:56374802-56374821 | MS.gene63483:intron | 60.0% | |
TCATGGGCTCGTGGCTCATC+TGG | - | chr3.1:56375011-56375030 | MS.gene63483:intron | 60.0% | |
! | TAGCGAGGGCCTTGTGCACT+GGG | - | chr3.1:56374191-56374210 | MS.gene63483:intron | 60.0% |
! | TCTGGCTCCGCCACTGCTAA+CGG | - | chr3.1:56374002-56374021 | MS.gene63483:intron | 60.0% |
CAGTGCACAAGGCCCTCGCT+AGG | + | chr3.1:56374192-56374211 | None:intergenic | 65.0% | |
CCTCCGGCGAACTCATCCAC+CGG | - | chr3.1:56373151-56373170 | MS.gene63483:CDS | 65.0% | |
GACTCACCGCCATCACCCAC+CGG | - | chr3.1:56373123-56373142 | MS.gene63483:CDS | 65.0% | |
GAGGAGATGCCGGTGGGTGA+TGG | + | chr3.1:56373135-56373154 | None:intergenic | 65.0% | |
GAGTTCGCCGGAGGAGATGC+CGG | + | chr3.1:56373145-56373164 | None:intergenic | 65.0% | |
TCACCCACCGGCATCTCCTC+CGG | - | chr3.1:56373135-56373154 | MS.gene63483:CDS | 65.0% | |
TGCACAAGGCCCTCGCTAGG+TGG | + | chr3.1:56374189-56374208 | None:intergenic | 65.0% | |
! | CTAGCGAGGGCCTTGTGCAC+TGG | - | chr3.1:56374190-56374209 | MS.gene63483:intron | 65.0% |
! | GAGATGCCGGTGGGTGATGG+CGG | + | chr3.1:56373132-56373151 | None:intergenic | 65.0% |
!! | AGCCACGTGTGGACTGGGAC+TGG | - | chr3.1:56372937-56372956 | MS.gene63483:intron | 65.0% |
!! | GTGTGGACTGGGACTGGCCA+TGG | - | chr3.1:56372943-56372962 | MS.gene63483:intron | 65.0% |
!! | TGGTGACGGCCCAGTGCACA+AGG | + | chr3.1:56374203-56374222 | None:intergenic | 65.0% |
CCGGTGGATGAGTTCGCCGG+AGG | + | chr3.1:56373154-56373173 | None:intergenic | 70.0% | |
GGCCAGTCCCAGTCCACACG+TGG | + | chr3.1:56372942-56372961 | None:intergenic | 70.0% | |
GGCGGAGCCACGTGTGGACT+GGG | - | chr3.1:56372932-56372951 | MS.gene63483:intron | 70.0% | |
TCGCCGGAGGAGATGCCGGT+GGG | + | chr3.1:56373141-56373160 | None:intergenic | 70.0% | |
TGGCGGAGCCACGTGTGGAC+TGG | - | chr3.1:56372931-56372950 | MS.gene63483:intron | 70.0% | |
TTCGCCGGAGGAGATGCCGG+TGG | + | chr3.1:56373142-56373161 | None:intergenic | 70.0% | |
! | GTCAGTGGCGGAGCCACGTG+TGG | - | chr3.1:56372926-56372945 | MS.gene63483:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 56372236 | 56375456 | 56372236 | ID=MS.gene63483 |
chr3.1 | mRNA | 56372236 | 56375456 | 56372236 | ID=MS.gene63483.t1;Parent=MS.gene63483 |
chr3.1 | exon | 56375160 | 56375456 | 56375160 | ID=MS.gene63483.t1.exon1;Parent=MS.gene63483.t1 |
chr3.1 | CDS | 56375160 | 56375456 | 56375160 | ID=cds.MS.gene63483.t1;Parent=MS.gene63483.t1 |
chr3.1 | exon | 56373046 | 56373262 | 56373046 | ID=MS.gene63483.t1.exon2;Parent=MS.gene63483.t1 |
chr3.1 | CDS | 56373046 | 56373262 | 56373046 | ID=cds.MS.gene63483.t1;Parent=MS.gene63483.t1 |
chr3.1 | exon | 56372841 | 56372947 | 56372841 | ID=MS.gene63483.t1.exon3;Parent=MS.gene63483.t1 |
chr3.1 | CDS | 56372841 | 56372947 | 56372841 | ID=cds.MS.gene63483.t1;Parent=MS.gene63483.t1 |
chr3.1 | exon | 56372236 | 56372424 | 56372236 | ID=MS.gene63483.t1.exon4;Parent=MS.gene63483.t1 |
chr3.1 | CDS | 56372236 | 56372424 | 56372236 | ID=cds.MS.gene63483.t1;Parent=MS.gene63483.t1 |
Gene Sequence |
Protein sequence |